Miyakogusa Predicted Gene

Lj2g3v0889040.4
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0889040.4 tr|G7LDT6|G7LDT6_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_8g062030 PE=4
SV=1,32.12,0.0000000005,DUF223,Domain of unknown function
DUF223,CUFF.35689.4
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g062030.1 | replication factor-A carboxy-terminal domain p...    69   2e-12
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20...    66   1e-11
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463...    59   1e-09
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821...    59   1e-09
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734...    59   1e-09
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987...    59   1e-09
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368...    59   2e-09
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908...    58   3e-09
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183...    58   3e-09
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014...    58   3e-09
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416...    58   3e-09
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647...    58   4e-09
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076...    57   4e-09
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560...    57   5e-09
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p...    57   5e-09
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p...    57   5e-09
Medtr1788s0010.1 | animal RPA1 domain protein | LC | scaffold178...    57   5e-09
Medtr6g069230.1 | animal RPA1 domain protein | LC | chr6:2491560...    57   6e-09
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111...    56   1e-08
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902...    56   1e-08
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096...    56   1e-08
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064...    55   2e-08
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599...    55   2e-08
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542...    54   7e-08
Medtr3g044760.1 | DUF223 domain protein | LC | chr3:14435139-144...    53   1e-07
Medtr1g085690.1 | DUF223 domain protein | HC | chr1:38294818-382...    50   1e-06
Medtr6g465570.1 | animal RPA1 domain protein | LC | chr6:2333006...    49   2e-06
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p...    48   4e-06
Medtr7g117425.1 | animal RPA1 domain protein | LC | chr7:4855438...    47   5e-06

>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
           protein | LC | chr8:25901653-25904109 | 20130731
          Length = 575

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 1   MDTQLSAIDHVTSIQQRGR-SWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQA 59
           MD  L  ++ +      GR +W IRVR V +W +P        + L+M+L+D+ G KIQA
Sbjct: 1   MDKSLDLVNDIVP----GRLNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQA 56

Query: 60  SVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIP 116
            V ++  +   + +  G VYNIS+F V  + G  R   H ++++F   T V       IP
Sbjct: 57  IVRKQLIYVFQKRLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSATIP 116

Query: 117 RNGWSFYNTQIIRNRIV 133
             G SF +   + N  V
Sbjct: 117 LYGLSFTSIVDVSNHTV 133


>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
           20130731
          Length = 665

 Score = 66.2 bits (160), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/137 (30%), Positives = 70/137 (51%), Gaps = 13/137 (9%)

Query: 1   MDTQLSAIDHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQAS 60
           MD  +  +D V    +   +W   VR + +W +P        + ++M+LID+ G KI A+
Sbjct: 1   MDKSIHNLDDVVP-GRNADAWRFVVRVIRLWEVPLF------TSIEMVLIDQNGVKIHAT 53

Query: 61  VCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVR--- 114
           + ++  +     +  G+VY +S+F V+LN G  R T H ++LIF   T V ES D     
Sbjct: 54  IPKQLMYLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKTKVEESHDYEISL 113

Query: 115 IPRNGWSFYNTQIIRNR 131
           IP +G +  +   I +R
Sbjct: 114 IPNHGLTLTDISQITSR 130


>Medtr8g463820.1 | animal RPA1 domain protein | LC |
           chr8:22514633-22516142 | 20130731
          Length = 283

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr8g096680.1 | animal RPA1 domain protein | HC |
           chr8:40558216-40559002 | 20130731
          Length = 172

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr1g036740.1 | animal RPA1 domain protein | HC |
           chr1:13497342-13498128 | 20130731
          Length = 172

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr8g059025.1 | animal RPA1 domain protein | LC |
           chr8:20549873-20550376 | 20130731
          Length = 138

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 3/119 (2%)

Query: 7   AIDHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR-- 64
           + D ++ I      W I+VR + +W +P        + L+M+LID +G KI ASV ++  
Sbjct: 4   SFDSLSEIVPDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLL 63

Query: 65  HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
           +     +  G+VY +S F V  + G  R T H ++L+F   T V  S  V IP  G S 
Sbjct: 64  YVFQPKLSEGKVYKMSFFSVAPSVGSYRTTLHPYKLVFQMKTKVQVSESVLIPTYGVSL 122


>Medtr8g088810.1 | DUF223 domain protein | LC |
           chr8:36895897-36893498 | 20130731
          Length = 306

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D ++++  R +SW++ VR V  W          P  ++ +LIDR+G +I AS+ R   + 
Sbjct: 6   DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  + +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVYSF 122


>Medtr8g036090.1 | animal RPA1 domain protein | HC |
           chr8:13279086-13278300 | 20130731
          Length = 172

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr4g471610.1 | animal RPA1 domain protein | HC |
           chr4:27071837-27072623 | 20130731
          Length = 172

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr3g078440.1 | animal RPA1 domain protein | HC |
           chr3:35350146-35349360 | 20130731
          Length = 172

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr7g089660.1 | animal RPA1 domain protein | LC |
           chr7:35114160-35121568 | 20130731
          Length = 236

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++LIDR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQNYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr1g094230.1 | animal RPA1 domain protein | LC |
           chr1:42436471-42437983 | 20130731
          Length = 303

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr6g039240.1 | animal RPA1 domain protein | LC |
           chr6:14180761-14182238 | 20130731
          Length = 289

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr3g095950.1 | animal RPA1 domain protein | HC |
           chr3:43845609-43846394 | 20130731
          Length = 172

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++LIDR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
           protein | LC | chr5:33436158-33438920 | 20130731
          Length = 517

 Score = 57.4 bits (137), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 21  WSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HPITRPIEVGRVYN 78
           W I+VR + +W +P        + L+M+LID  GTKI ASV ++  +     +  G+VY 
Sbjct: 18  WKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFYVFQSKLSEGKVYE 77

Query: 79  ISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
           +S F V  + G  R T H ++++F   T V       IP  G S 
Sbjct: 78  MSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQACEGASIPSLGISL 122


>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
           protein | LC | chr2:21416239-21412307 | 20130731
          Length = 549

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 8   IDHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--H 65
           ID ++ I     +W+IRVR V +W +        P  L+M+L+D +G +I ASV R   +
Sbjct: 5   IDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLIY 64

Query: 66  PITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIP 116
              + +   RV++I +F V  N G  R   H +++ F   T + +  D  +P
Sbjct: 65  KYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVP 116


>Medtr1788s0010.1 | animal RPA1 domain protein | LC |
           scaffold1788:754-253 | 20130731
          Length = 139

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D  +++  R +SW++ VR V  W          P  ++++L+DR+G +I AS+ R   + 
Sbjct: 6   DFNSNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYNT 125
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF + 
Sbjct: 66  SKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTSA 125

Query: 126 QIIRNRIVWELFLL 139
             + N      FL+
Sbjct: 126 YDVFNESYDNNFLV 139


>Medtr6g069230.1 | animal RPA1 domain protein | LC |
           chr6:24915605-24909459 | 20130731
          Length = 356

 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 16  QRGR-SWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HPITRPIE 72
           + GR +WS++VR + +W +    +    + L++IL+DR G KIQASV  +        +E
Sbjct: 108 KTGRMNWSVKVRLLRMWNVESSIVAGKVNSLELILLDREGNKIQASVPLQCIEVFNHILE 167

Query: 73  VGRVYNISHFKVVLNDGIRLTPHD-FRLIFHTCTSVAESFDVRIPRNGWSFYNTQIIRNR 131
             R Y  S F VV N    +T H+  RLIFH+ T V  +    I + G S + ++ I   
Sbjct: 168 ENRGYVFSDFHVVSNIADMMTTHNSHRLIFHSNTEVIFTDIPAIDKFGLSIHGSEAISKH 227

Query: 132 IVWELFLLLV 141
           +    +L+ V
Sbjct: 228 VFGYSYLVDV 237


>Medtr8g467450.1 | animal RPA1 domain protein | LC |
           chr8:24241111-24240561 | 20130731
          Length = 142

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 6   SAIDHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR- 64
           S  D + ++      W  +V+ + +W +P       P+ L+M+LID +G KI A+V ++ 
Sbjct: 3   SCFDSLAAVVPWREGWRFKVKILRMWEVPAFLNLDQPNSLEMVLIDEKGDKIHATVRKQL 62

Query: 65  -HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWS 121
            +   + +     Y + +F +  N G    T  +F+LIF   T V +     IP NG S
Sbjct: 63  LYVFQKKLAEEDAYKMFYFSIAPNVGYYHTTTQEFKLIFQMKTKVQKIESSAIPDNGLS 121


>Medtr5g085220.1 | animal RPA1 domain protein | LC |
           chr5:36789021-36788235 | 20130731
          Length = 172

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 5/118 (4%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVW-RIPFDHITLTPSCLDMILIDRRGTKIQASVCR--RH 65
           + ++++  R +SW++ VR V  W    + +  L+ S +D++LIDR+G +I AS+ R   +
Sbjct: 6   NFISNVSPRKQSWTLVVRVVPAWFGKDYKNKKLSFS-MDLVLIDRKGDRIGASIRRILIY 64

Query: 66  PITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
                ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 65  KFKEQLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr3g116750.1 | animal RPA1 domain protein | HC |
           chr3:54610965-54611750 | 20130731
          Length = 172

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR    W          P  ++++LIDR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVARAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr5g055160.1 | animal RPA1 domain protein | LC |
           chr5:22720640-22718177 | 20130731
          Length = 270

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L++R+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N+G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSF 122


>Medtr2g032570.1 | animal RPA1 domain protein | LC |
           chr2:12255994-12255202 | 20130731
          Length = 174

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++L++R+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++ G V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSF 122


>Medtr7g093810.1 | animal RPA1 domain protein | HC |
           chr7:37315424-37314639 | 20130731
          Length = 172

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           + ++++  R +SW++ VR V  W          P  ++++LIDR+G +I AS+ R   + 
Sbjct: 6   NFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYK 65

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
               ++   V+ IS F V  N G  R + ++++L F   T V  S  V +P N +SF
Sbjct: 66  FKNQLQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSF 122


>Medtr3g044760.1 | DUF223 domain protein | LC |
           chr3:14435139-14437639 | 20130731
          Length = 444

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 20  SWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASV---CRRHPITRPIEVGRV 76
           +W+IRVR V +WRI    +      ++M+L+D+ G +IQA++   C            RV
Sbjct: 17  AWNIRVRVVRLWRIMSSLVRGRVIFMEMVLLDQDGNRIQATIPPDCVDR-FQNTFHENRV 75

Query: 77  YNISHFKVVLND-GIRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYNT-QIIRNR 131
           Y  S+FKV+ ND   R+T H+ RL     T V       I R G+SF+++ QI+ ++
Sbjct: 76  YMFSNFKVLPNDRSTRVTSHNHRLKLWEETVVVNHDGYIIQRFGFSFFSSAQILEHQ 132


>Medtr1g085690.1 | DUF223 domain protein | HC |
           chr1:38294818-38296141 | 20130731
          Length = 233

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 45  LDMILIDRRGTKIQASVCRR--HPITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIF 101
           +D++L+DR+G +I AS+ R+  +     ++ G V+ IS F V  N G  R + ++++L F
Sbjct: 1   MDLVLMDRKGDRIGASIRRKLIYKFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNF 60

Query: 102 HTCTSVAESFDVRIPRNGWSF 122
              T V  S  V +P N +SF
Sbjct: 61  TINTKVKLSKTVLVPTNVYSF 81


>Medtr6g465570.1 | animal RPA1 domain protein | LC |
           chr6:23330063-23328693 | 20130731
          Length = 172

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 11  VTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HPIT 68
           V  I+      ++ VR + +W +P     +    L M+L+D +  KI ASV +   H   
Sbjct: 4   VAGIKCGNTDLALTVRVIHLWSVPDRTNPVVDGSLHMLLLDEKCGKIHASVRKNLIHLFK 63

Query: 69  RPIEVGRVYNISHFKVVLND-GIRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSF 122
             I+ G  Y I  F V  ND   + T H ++L F   T+V     V IP + ++F
Sbjct: 64  DQIDEGSAYVIESFMVGSNDHAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTF 118


>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
          protein | HC | chr4:11830642-11833873 | 20130731
          Length = 560

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 11 VTSIQQRGRSWSIRVRAVAVWRIP-FDHITLTPSCLDMILIDRRGTKIQASVCRR--HPI 67
          ++ I     +W+I+ R V +W++  F+  TL P  ++M+L+D  G++I AS+ +   +  
Sbjct: 8  ISQISSSKPAWNIKARVVRLWKVSDFNRNTL-PFSIEMVLMDSEGSRIHASIKKTLLYKF 66

Query: 68 TRPIEVGRVYNISHFKVVLNDGIRLTPH 95
             I  G+VY+  +  V  N G   T H
Sbjct: 67 QSEIREGKVYSFENMGVAANGGSYKTTH 94


>Medtr7g117425.1 | animal RPA1 domain protein | LC |
           chr7:48554380-48555674 | 20130731
          Length = 258

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 9   DHVTSIQQRGRSWSIRVRAVAVWRIPFDHITLTPSCLDMILIDRRGTKIQASVCRR--HP 66
           D+++ I     SWSI VR V  W +   +    P  LDM      G KI A+V R   + 
Sbjct: 6   DNISEISPVKESWSIVVRIVCAWFVRDVNRDAHPFSLDM------GNKIHATVRRTLIYK 59

Query: 67  ITRPIEVGRVYNISHFKVVLNDG-IRLTPHDFRLIFHTCTSVAESFDVRIPRNGWSFYN 124
             + ++ G+VY++S F V  N G  R T H+++L F   T V       +P + +   N
Sbjct: 60  FEKDLQEGKVYSMSCFGVAANLGSYRTTKHEYKLNFQFNTKVKLCGKNGVPSDIYPISN 118