Miyakogusa Predicted Gene

Lj2g3v0879000.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0879000.2 Non Characterized Hit- tr|I1J4G6|I1J4G6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45959
PE,86,0,tRNA-synt_1d,Arginyl-tRNA synthetase, class Ia, core;
DALR_1,DALR anticodon binding; Arg_tRNA_synt_N,CUFF.35620.2
         (651 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088865.1 | cytoplasmic-like arginine-tRNA ligase | HC | c...  1189   0.0  
Medtr3g110380.1 | cytoplasmic-like arginine-tRNA ligase | HC | c...  1003   0.0  
Medtr1g106040.1 | cytoplasmic-like arginine-tRNA ligase | HC | c...  1000   0.0  
Medtr4g102240.1 | cytoplasmic-like arginine-tRNA ligase | HC | c...   908   0.0  
Medtr7g099100.1 | amine-terminal domain arginine-tRNA ligase | L...    79   1e-14
Medtr5g014910.1 | coatomer subunit beta-like protein, putative |...    66   1e-10

>Medtr6g088865.1 | cytoplasmic-like arginine-tRNA ligase | HC |
           chr6:34025313-34035369 | 20130731
          Length = 659

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/656 (86%), Positives = 608/656 (92%), Gaps = 6/656 (0%)

Query: 2   LSCLNLNRFSHFPSHTSLPPSRSDLLKAATRRFV-LTVTKTDSNIVTT----KTQQSPPT 56
           L CLNLNR SHF S  SL PSRSDLLK ATRRF  L+V KT  +  +     KTQ SPPT
Sbjct: 4   LGCLNLNRLSHFHSPPSLQPSRSDLLKVATRRFTALSVAKTQQSSSSPSLSSKTQSSPPT 63

Query: 57  LSIDIDNPASVKRQLAQLFEVSLRATVPDEIDVAPLVEACASK-GGVKFGDYQCNNAMGV 115
           LSIDIDNPASVKRQLAQLF+VSL+  VPDE DV PLV+ C +K G VKFGDYQCNNAMG+
Sbjct: 64  LSIDIDNPASVKRQLAQLFDVSLKTIVPDEEDVVPLVDVCTAKTGSVKFGDYQCNNAMGI 123

Query: 116 WSKIKGKQTEFKGPPAIGQAIISNLPPSEIIDSCSLAGPGFVNVVLSKNWIAQGVQRMLS 175
           WSK+KGK+T FKGPPAIGQAII NLPPSE+IDSCSLAGPGFVNVVLSK+WIAQ VQRML+
Sbjct: 124 WSKLKGKETGFKGPPAIGQAIIKNLPPSEMIDSCSLAGPGFVNVVLSKHWIAQSVQRMLN 183

Query: 176 DGIDMWAPRLPIKRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVEFIIRRNHV 235
           DGID WAPRLPI+RAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVE + RRNHV
Sbjct: 184 DGIDTWAPRLPIRRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVELVTRRNHV 243

Query: 236 GDWGTQFGMLITYLFEKFPNLDDVSEAAIGDLQAFYKASKVRFDDDPEFKQRAQQAVILL 295
           GDWGTQFGMLI YLFEKFPN +DVSE AIGDLQAFYKASKVRFDDDPEFK RAQQAV+LL
Sbjct: 244 GDWGTQFGMLIEYLFEKFPNQEDVSETAIGDLQAFYKASKVRFDDDPEFKLRAQQAVVLL 303

Query: 296 QGGDIKYRKAWQQICDVSRAEFDRVYQRLGVRLEEMGESFYNPYIPGVLEKLDKLGLIED 355
           Q GD +YRKAWQQICD+SRAEFD+VYQRLGV+LEEMGESFYNPYIPGV+EKLDKLGL+ED
Sbjct: 304 QSGDTRYRKAWQQICDISRAEFDKVYQRLGVQLEEMGESFYNPYIPGVIEKLDKLGLVED 363

Query: 356 SDGARVIYVEGVNIPLIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFD 415
           SDGARVIYVEGVNIP+IAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFD
Sbjct: 364 SDGARVIYVEGVNIPIIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFD 423

Query: 416 MLFKAFRRAGWLPRDENAYPKCTHIGFGLVLGDDGKRFRSRSSEVVRLVDLLDEAKRRCK 475
           ML+KAFRRAGWLPR+ENAYPKCTHIGFGLVLG+DGKRFRSRSSEVVRLVDLLDEAKRRCK
Sbjct: 424 MLYKAFRRAGWLPRNENAYPKCTHIGFGLVLGNDGKRFRSRSSEVVRLVDLLDEAKRRCK 483

Query: 476 TALLERDTAKDWSEEEIDKTAEAIGYGAVKYADLKINRLTNYTFNFDQMLNDKGNTAVYL 535
           TALLERDT  DWSEEEI++T+EAIGYGAVKYADLKINRLTNY F+FDQML+DKGNTAVYL
Sbjct: 484 TALLERDTTNDWSEEEIERTSEAIGYGAVKYADLKINRLTNYKFDFDQMLSDKGNTAVYL 543

Query: 536 LYAHARICSIIRKSGKDMEEVKKNGIIVLDHEDERLLGLHLLQFPEVFEEACINLLPNVL 595
           LYAHARICSIIRKSGKD+EEVKKNG+IVLDHE ERLLGLH+LQFPEVFEEAC NLLP+VL
Sbjct: 544 LYAHARICSIIRKSGKDIEEVKKNGVIVLDHESERLLGLHILQFPEVFEEACSNLLPSVL 603

Query: 596 CEYLYNLAEIFTKKFYSNCQVVGSPEETSRLLLCEATAIVMRKCFDLLGIIPVYKL 651
           C+YLY LAEIFTKKFYSNCQVVG+PEETSRLLLCEATA+VMRKCF LLGI PVYKL
Sbjct: 604 CDYLYTLAEIFTKKFYSNCQVVGTPEETSRLLLCEATAVVMRKCFYLLGIEPVYKL 659


>Medtr3g110380.1 | cytoplasmic-like arginine-tRNA ligase | HC |
           chr3:51564189-51571994 | 20130731
          Length = 596

 Score = 1003 bits (2593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/594 (79%), Positives = 533/594 (89%), Gaps = 1/594 (0%)

Query: 59  IDIDNPASVKRQLAQLFEVSLRATVPDEID-VAPLVEACASKGGVKFGDYQCNNAMGVWS 117
           I++D PASV++QLA+LF  +L AT+P + D + PL++AC +K G+K  DYQCNNAM +++
Sbjct: 3   IELDAPASVRKQLAKLFVEALNATLPTQSDAIVPLIDACVAKNGIKPADYQCNNAMSLFA 62

Query: 118 KIKGKQTEFKGPPAIGQAIISNLPPSEIIDSCSLAGPGFVNVVLSKNWIAQGVQRMLSDG 177
           KIKGKQ EF  P ++G+ I+ NLPPS+++ SCS+AGPGFVN+VLSKNWIAQ +QRML+DG
Sbjct: 63  KIKGKQQEFINPRSLGEGIMRNLPPSQMVQSCSVAGPGFVNIVLSKNWIAQSLQRMLTDG 122

Query: 178 IDMWAPRLPIKRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVEFIIRRNHVGD 237
           ID WAPRLPIKR MVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEF + E +IRRNH+GD
Sbjct: 123 IDSWAPRLPIKRVMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFCQPECLIRRNHIGD 182

Query: 238 WGTQFGMLITYLFEKFPNLDDVSEAAIGDLQAFYKASKVRFDDDPEFKQRAQQAVILLQG 297
           WGTQFGMLI YLFEKFPN +DV+E+ IGDLQAFYKASK+RFD DP FK  AQQ+V+ LQG
Sbjct: 183 WGTQFGMLIAYLFEKFPNPEDVNESDIGDLQAFYKASKLRFDSDPAFKLNAQQSVVKLQG 242

Query: 298 GDIKYRKAWQQICDVSRAEFDRVYQRLGVRLEEMGESFYNPYIPGVLEKLDKLGLIEDSD 357
           GD KYR AW+QICDVSR EF++VYQRLG+RLEEM ESF+N  IP  LEKL+KLGLIED++
Sbjct: 243 GDPKYRTAWKQICDVSRTEFNKVYQRLGIRLEEMPESFFNRLIPPTLEKLEKLGLIEDNE 302

Query: 358 GARVIYVEGVNIPLIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFDML 417
           GARVI+VEGV+IPLIAVKRDGGYNYFSTDLASLWYRLN EKL+W +YVTD+GQ QHFDML
Sbjct: 303 GARVIFVEGVDIPLIAVKRDGGYNYFSTDLASLWYRLNVEKLDWNIYVTDVGQWQHFDML 362

Query: 418 FKAFRRAGWLPRDENAYPKCTHIGFGLVLGDDGKRFRSRSSEVVRLVDLLDEAKRRCKTA 477
           FKAFRRAGWLP+D N YP CTHIGFGLVLGDDGKRFRSRSSE VRLVDLLDEAKRRCK A
Sbjct: 363 FKAFRRAGWLPKDPNEYPICTHIGFGLVLGDDGKRFRSRSSETVRLVDLLDEAKRRCKVA 422

Query: 478 LLERDTAKDWSEEEIDKTAEAIGYGAVKYADLKINRLTNYTFNFDQMLNDKGNTAVYLLY 537
           LLERD AKDW+EEEI+KT+EAIGYGAVKYADLKINR TNYTFNFDQMLNDKGNTAVYLLY
Sbjct: 423 LLERDNAKDWTEEEIEKTSEAIGYGAVKYADLKINRTTNYTFNFDQMLNDKGNTAVYLLY 482

Query: 538 AHARICSIIRKSGKDMEEVKKNGIIVLDHEDERLLGLHLLQFPEVFEEACINLLPNVLCE 597
           AHARICSIIRKSGKD+EE+KKNG +VL+HEDER LGLHLLQF EVF E+C NLLPNVLCE
Sbjct: 483 AHARICSIIRKSGKDIEELKKNGNLVLEHEDERTLGLHLLQFTEVFVESCSNLLPNVLCE 542

Query: 598 YLYNLAEIFTKKFYSNCQVVGSPEETSRLLLCEATAIVMRKCFDLLGIIPVYKL 651
           YLYNLAEIFTKKFYS+CQVVGSPEETSRLLLCEAT +VMR CF LLGI PVYKL
Sbjct: 543 YLYNLAEIFTKKFYSSCQVVGSPEETSRLLLCEATLVVMRHCFYLLGIDPVYKL 596


>Medtr1g106040.1 | cytoplasmic-like arginine-tRNA ligase | HC |
           chr1:47979152-47971192 | 20130731
          Length = 596

 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/594 (79%), Positives = 532/594 (89%), Gaps = 1/594 (0%)

Query: 59  IDIDNPASVKRQLAQLFEVSLRATVPDEIDVAPLVEACASKGGVKFGDYQCNNAMGVWSK 118
           I++D PASV++QLA LF  +L ATVP E DV PL++AC  K GVK  DYQCNNAM +++K
Sbjct: 3   IELDAPASVRKQLATLFREALIATVPTEPDVVPLIDACVPKNGVKHADYQCNNAMSLFAK 62

Query: 119 IKGKQTEFKGPPAIGQAIISNLPPSEIIDSCSLAGPGFVNVVLSKNWIAQGVQRMLSDGI 178
           IKGK+ EFK P ++G+AI+ NLPPSE+++SCS+AGPGFVN+VLSK WI++ +Q+ML+DGI
Sbjct: 63  IKGKRPEFKSPRSVGEAIMKNLPPSEMVESCSVAGPGFVNIVLSKKWISKSLQKMLTDGI 122

Query: 179 DMWAPRLPIKRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVEFIIRRNHVGDW 238
           D WAPRLPIKR MVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEF + E +IRRNH+GDW
Sbjct: 123 DSWAPRLPIKRVMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFCQPECLIRRNHIGDW 182

Query: 239 GTQFGMLITYLFEKFPNLDDVSEAAIGDLQAFYKASKVRFDDDPEFKQRAQQAVILLQGG 298
           GTQFGMLI YLFEKFPN +DV E+ IGDLQAFYKASK++FD DP+FK++AQ +V+ LQ G
Sbjct: 183 GTQFGMLIAYLFEKFPNPEDVKESDIGDLQAFYKASKLKFDSDPDFKKKAQLSVVELQSG 242

Query: 299 -DIKYRKAWQQICDVSRAEFDRVYQRLGVRLEEMGESFYNPYIPGVLEKLDKLGLIEDSD 357
            D KYR AW+QICD+SR EF++VYQRLG+RLEEM ESF+NP IP  LEKL+KLGLIED+D
Sbjct: 243 EDPKYRTAWKQICDISRTEFNKVYQRLGIRLEEMPESFFNPLIPPTLEKLEKLGLIEDND 302

Query: 358 GARVIYVEGVNIPLIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFDML 417
           GARVI+VEGV+IPLIAVKRDGGYNYFSTDLASLWYRLN EKL+W +YVTD+GQ QHFDML
Sbjct: 303 GARVIFVEGVDIPLIAVKRDGGYNYFSTDLASLWYRLNVEKLDWNIYVTDVGQWQHFDML 362

Query: 418 FKAFRRAGWLPRDENAYPKCTHIGFGLVLGDDGKRFRSRSSEVVRLVDLLDEAKRRCKTA 477
           FKAFRRAGWLP+D N YP CTHIGFGLV GDDGKRFRSRSSE VRLVDLLDEAKRRCK A
Sbjct: 363 FKAFRRAGWLPKDPNEYPICTHIGFGLVCGDDGKRFRSRSSETVRLVDLLDEAKRRCKVA 422

Query: 478 LLERDTAKDWSEEEIDKTAEAIGYGAVKYADLKINRLTNYTFNFDQMLNDKGNTAVYLLY 537
           LLERD AKDW+EEEI+KT+EAIGYGAVKYADLKINR TNYTFNFDQMLNDKGNTAVYLLY
Sbjct: 423 LLERDNAKDWTEEEIEKTSEAIGYGAVKYADLKINRTTNYTFNFDQMLNDKGNTAVYLLY 482

Query: 538 AHARICSIIRKSGKDMEEVKKNGIIVLDHEDERLLGLHLLQFPEVFEEACINLLPNVLCE 597
           AHARICSIIRKSGKD+EE+KK G +VL+HEDER LGLHLLQF EVF E+C NLLPNVLCE
Sbjct: 483 AHARICSIIRKSGKDIEELKKTGNLVLEHEDERTLGLHLLQFTEVFVESCSNLLPNVLCE 542

Query: 598 YLYNLAEIFTKKFYSNCQVVGSPEETSRLLLCEATAIVMRKCFDLLGIIPVYKL 651
           YLYNL+EIFTKKFYS+CQVVGSPEETSRLLLCEAT IVMR CF LLGI PVYKL
Sbjct: 543 YLYNLSEIFTKKFYSSCQVVGSPEETSRLLLCEATLIVMRHCFYLLGIDPVYKL 596


>Medtr4g102240.1 | cytoplasmic-like arginine-tRNA ligase | HC |
           chr4:42314063-42306940 | 20130731
          Length = 597

 Score =  908 bits (2347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/603 (72%), Positives = 505/603 (83%), Gaps = 18/603 (2%)

Query: 59  IDIDNPASVKRQLAQLFEVSLRATVPDEIDVAPLVEAC-ASKGGVKFGDYQCNNAMGVWS 117
           I++D P+SVK+QLA+LF  SL+ATVP E DV PLVEAC A+K GVK  DYQCNNAM ++ 
Sbjct: 3   IELDCPSSVKKQLAELFRESLKATVPSEPDVVPLVEACVANKNGVKHADYQCNNAMSLFP 62

Query: 118 KIKGKQTEFKGPPAIGQAIISNLPPSEIIDSCSLAGPGFVNVVLSKNWIAQGVQRMLSDG 177
            IK KQ EF+ P ++G+ I  NLPPSE+++SC +AG G+VN+VLSK WIAQ +Q+ML+ G
Sbjct: 63  IIKEKQPEFRNPRSLGEGIAKNLPPSEMVESCFVAGSGYVNIVLSKKWIAQSLQKMLTSG 122

Query: 178 IDMWAPRLPIKRAMVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSRVEFIIRRNHVGD 237
           I  WAPRLP+KR +VDFSSPNIAKEMHVGHLRSTIIGDT+ARMLEF + E +IRRNH+GD
Sbjct: 123 IHSWAPRLPVKRILVDFSSPNIAKEMHVGHLRSTIIGDTIARMLEFCQPECLIRRNHIGD 182

Query: 238 WGTQFGMLITYLFEKFPNLDDVSEAAIGDLQAFYKASKVRFDDDPEFKQRAQQAVILLQG 297
           WGTQFG++ T          +++E  IGDLQ FYK SK ++D DP+FK +A+Q+V+ LQ 
Sbjct: 183 WGTQFGIIRTG--------GNINECDIGDLQEFYKTSKSKYDSDPDFKTKARQSVVKLQR 234

Query: 298 GDIKYRKAWQQICDVSRAEFDRVYQRLGVRLEEMGESFYNPYIPGVLEKLDKLGLIEDSD 357
           GD KYR+AW +IC+VSRAE+++VY+RLGV LEE  ESFYNPYIP  L+KL+KLGLIEDSD
Sbjct: 235 GDPKYREAWHKICEVSRAEYNKVYRRLGVHLEEKPESFYNPYIPPTLKKLEKLGLIEDSD 294

Query: 358 GARVIYVEGVNIPLIAVKRDGGYNYFSTDLASLWYRLNKEKLEWIVYVTDIGQQQHFDML 417
           GARVI+VEGV+ PLIA K DGGYNYFSTDLASLWYRLN EK++W +YVTD+GQ QHFDML
Sbjct: 295 GARVIFVEGVDRPLIARKSDGGYNYFSTDLASLWYRLNIEKIDWNIYVTDVGQWQHFDML 354

Query: 418 FKAFRRAG---------WLPRDENAYPKCTHIGFGLVLGDDGKRFRSRSSEVVRLVDLLD 468
           FKAFRRAG         WLP+D N YP CTH+GFGLV GDDGKRFRSRSSE VRLVDLLD
Sbjct: 355 FKAFRRAGCRDGSINVGWLPKDANEYPICTHVGFGLVCGDDGKRFRSRSSETVRLVDLLD 414

Query: 469 EAKRRCKTALLERDTAKDWSEEEIDKTAEAIGYGAVKYADLKINRLTNYTFNFDQMLNDK 528
           EAK RCK  LLERD AK W+EEEIDKTAEAIGYGAVKYADLKINR TNYTF+FDQMLNDK
Sbjct: 415 EAKSRCKDTLLERDNAKGWTEEEIDKTAEAIGYGAVKYADLKINRSTNYTFSFDQMLNDK 474

Query: 529 GNTAVYLLYAHARICSIIRKSGKDMEEVKKNGIIVLDHEDERLLGLHLLQFPEVFEEACI 588
           GNTAVYLLYAHARICSII KSGKD+EE+KKNG +VLDH+DE  L LHLLQF EVF E+C 
Sbjct: 475 GNTAVYLLYAHARICSIIEKSGKDIEELKKNGSLVLDHKDECTLALHLLQFTEVFVESCS 534

Query: 589 NLLPNVLCEYLYNLAEIFTKKFYSNCQVVGSPEETSRLLLCEATAIVMRKCFDLLGIIPV 648
           NLLPN LCEYLY+LAEIFTKKFYSNCQVVGSPEETSRLLLCEAT  VMR+CF LLGI PV
Sbjct: 535 NLLPNKLCEYLYDLAEIFTKKFYSNCQVVGSPEETSRLLLCEATLTVMRQCFYLLGIEPV 594

Query: 649 YKL 651
            KL
Sbjct: 595 DKL 597


>Medtr7g099100.1 | amine-terminal domain arginine-tRNA ligase | LC |
           chr7:39711012-39713076 | 20130731
          Length = 145

 Score = 79.3 bits (194), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/77 (49%), Positives = 53/77 (68%), Gaps = 5/77 (6%)

Query: 99  KGGVKFGDYQCNNAMGVWSKIKGKQTEFKGPPAIGQAIISNLPPSEIIDSCSLAGPGFVN 158
           K GVK  DYQ NNAM +++KIK +Q EFK P         ++ PS++++SCS+AG GFVN
Sbjct: 25  KNGVKHADYQFNNAMSLFAKIKEQQPEFKNPRHY-----KSIHPSDMVESCSVAGLGFVN 79

Query: 159 VVLSKNWIAQGVQRMLS 175
           +VLS  WI + VQ+ L+
Sbjct: 80  IVLSNKWIEKVVQKRLT 96


>Medtr5g014910.1 | coatomer subunit beta-like protein, putative | HC
           | chr5:5075537-5077437 | 20130731
          Length = 134

 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 27/36 (75%), Positives = 33/36 (91%)

Query: 296 QGGDIKYRKAWQQICDVSRAEFDRVYQRLGVRLEEM 331
           Q GD +YR+AWQQICDVSRAEFD++YQ +GV+LEEM
Sbjct: 18  QSGDARYRRAWQQICDVSRAEFDKIYQCIGVQLEEM 53