Miyakogusa Predicted Gene

Lj2g3v0878910.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0878910.1 Non Characterized Hit- tr|I1N992|I1N992_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.1,0.0000002,seg,NULL,
gene.Ljchr2_pseudomol_20120830.path1.gene2582.1
         (59 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g093290.1 | metal tolerance-like protein | HC | chr7:37063...    57   5e-09

>Medtr7g093290.1 | metal tolerance-like protein | HC |
           chr7:37063412-37072046 | 20130731
          Length = 390

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 27/29 (93%)

Query: 31  YLIVSAVTNLFVNLIVVWFFRNYARINLA 59
           YL VSAVTNLFVNLI VWFFRNYARINLA
Sbjct: 213 YLNVSAVTNLFVNLIGVWFFRNYARINLA 241