Miyakogusa Predicted Gene
- Lj2g3v0855190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0855190.1 tr|A9TAH7|A9TAH7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_193120,41.24,3e-16, ,CUFF.35557.1
(166 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g088695.1 | nucleotide-diphospho-sugar transferase domain ... 247 4e-66
Medtr8g102500.3 | nucleotide-diphospho-sugar transferase domain ... 244 2e-65
Medtr8g102500.2 | nucleotide-diphospho-sugar transferase domain ... 244 2e-65
Medtr8g102500.1 | nucleotide-diphospho-sugar transferase domain ... 244 2e-65
Medtr8g102490.1 | nucleotide-diphospho-sugar transferase superfa... 187 5e-48
>Medtr6g088695.1 | nucleotide-diphospho-sugar transferase domain
protein | HC | chr6:33836514-33831446 | 20130731
Length = 521
Score = 247 bits (630), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/167 (69%), Positives = 139/167 (83%), Gaps = 1/167 (0%)
Query: 1 MIQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSP 60
++ VAA L+FH KGYS+E+M YTSGGLSLVYFLA CTL+EL SMWNLTRIEV LCN+LSP
Sbjct: 355 IVHVAAALQFHYKGYSVEEMAYTSGGLSLVYFLAICTLLELLSMWNLTRIEVQLCNMLSP 414
Query: 61 EATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTP 120
E PLS+ YNW LVFIAMLVDNFLYP+SAIRSHFSQSINWSGIRY+LK GK+ KI+RT
Sbjct: 415 EEPPLSIVNYNWCLVFIAMLVDNFLYPISAIRSHFSQSINWSGIRYHLKNGKICKIDRTQ 474
Query: 121 RREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKKSE 166
+D+ PV+TDL+GK L+G KG +KG ++ SLS+ + RQPK+SE
Sbjct: 475 PNKDMAPVFTDLAGKLLHGRKGFPSKGPLLSSLSKKYTEWRQPKRSE 521
>Medtr8g102500.3 | nucleotide-diphospho-sugar transferase domain
protein | HC | chr8:43151337-43159305 | 20130731
Length = 499
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
Query: 2 IQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSPE 61
I +AA RF+ GYSLE+ YTS GLSLV FLA CTLVEL SMWNLTRIEV LCN+LSPE
Sbjct: 333 IHLAAAFRFYSNGYSLEETAYTSAGLSLVTFLAICTLVELLSMWNLTRIEVQLCNMLSPE 392
Query: 62 ATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTPR 121
A LSLATYNW LVFIA+LVDNFLYPLSAI+SHFSQSINWSGIRYYLK GK+ KIERT R
Sbjct: 393 APQLSLATYNWCLVFIALLVDNFLYPLSAIKSHFSQSINWSGIRYYLKHGKIIKIERTER 452
Query: 122 REDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
+D+ PV+TDL GKHLYG KG+ +GS + SLSRS + QPKK
Sbjct: 453 SKDMSPVFTDLGGKHLYGKKGMPARGSFLGSLSRSLAQWHQPKK 496
>Medtr8g102500.2 | nucleotide-diphospho-sugar transferase domain
protein | HC | chr8:43151337-43159305 | 20130731
Length = 517
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
Query: 2 IQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSPE 61
I +AA RF+ GYSLE+ YTS GLSLV FLA CTLVEL SMWNLTRIEV LCN+LSPE
Sbjct: 351 IHLAAAFRFYSNGYSLEETAYTSAGLSLVTFLAICTLVELLSMWNLTRIEVQLCNMLSPE 410
Query: 62 ATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTPR 121
A LSLATYNW LVFIA+LVDNFLYPLSAI+SHFSQSINWSGIRYYLK GK+ KIERT R
Sbjct: 411 APQLSLATYNWCLVFIALLVDNFLYPLSAIKSHFSQSINWSGIRYYLKHGKIIKIERTER 470
Query: 122 REDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
+D+ PV+TDL GKHLYG KG+ +GS + SLSRS + QPKK
Sbjct: 471 SKDMSPVFTDLGGKHLYGKKGMPARGSFLGSLSRSLAQWHQPKK 514
>Medtr8g102500.1 | nucleotide-diphospho-sugar transferase domain
protein | HC | chr8:43151337-43159325 | 20130731
Length = 519
Score = 244 bits (624), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 134/164 (81%), Gaps = 1/164 (0%)
Query: 2 IQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIEVLLCNILSPE 61
I +AA RF+ GYSLE+ YTS GLSLV FLA CTLVEL SMWNLTRIEV LCN+LSPE
Sbjct: 353 IHLAAAFRFYSNGYSLEETAYTSAGLSLVTFLAICTLVELLSMWNLTRIEVQLCNMLSPE 412
Query: 62 ATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERTPR 121
A LSLATYNW LVFIA+LVDNFLYPLSAI+SHFSQSINWSGIRYYLK GK+ KIERT R
Sbjct: 413 APQLSLATYNWCLVFIALLVDNFLYPLSAIKSHFSQSINWSGIRYYLKHGKIIKIERTER 472
Query: 122 REDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVR-RQPKK 164
+D+ PV+TDL GKHLYG KG+ +GS + SLSRS + QPKK
Sbjct: 473 SKDMSPVFTDLGGKHLYGKKGMPARGSFLGSLSRSLAQWHQPKK 516
>Medtr8g102490.1 | nucleotide-diphospho-sugar transferase
superfamily protein | HC | chr8:43141659-43145775 |
20130731
Length = 478
Score = 187 bits (474), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/165 (61%), Positives = 119/165 (72%), Gaps = 13/165 (7%)
Query: 1 MIQVAATLRFHLKGYSLEDMTYTSGGLSLVYFLATCTLVELFSMWNLTRIE-VLLCNILS 59
MI +AA RF+ KGYSLE+M Y S GLS V FLA CT V L SMWNLTRIE V LCN+LS
Sbjct: 320 MIHLAAVFRFYSKGYSLEEMAY-SCGLSQVTFLAICTFVVLLSMWNLTRIEEVQLCNMLS 378
Query: 60 PEATPLSLATYNWFLVFIAMLVDNFLYPLSAIRSHFSQSINWSGIRYYLKEGKVSKIERT 119
PE L L VFIA+LV+N LYPLSAI+SHFSQSINWSGIRYYLK GKV KIERT
Sbjct: 379 PEGPQLCL-------VFIALLVNNILYPLSAIKSHFSQSINWSGIRYYLKHGKVIKIERT 431
Query: 120 PRREDVEPVYTDLSGKHLYGMKGLNTKGSIIRSLSRSFVRRQPKK 164
R +D+ P++TDL GKHLYG + + + R + + FV++ KK
Sbjct: 432 ERSKDMSPIFTDLGGKHLYGKE----RDACQRFIPQFFVQKSSKK 472