Miyakogusa Predicted Gene

Lj2g3v0854130.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0854130.1 Non Characterized Hit- tr|I1MM17|I1MM17_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21174
PE,77.18,0,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT
TIM-17,NULL; seg,NULL; Tim17,Mitochondrial i,CUFF.35554.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088745.3 | import inner membrane translocase subunit TIM2...   265   2e-71
Medtr6g088745.2 | import inner membrane translocase subunit TIM2...   265   2e-71
Medtr6g088745.1 | import inner membrane translocase subunit TIM2...   265   2e-71

>Medtr6g088745.3 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33881240 | 20130731
          Length = 210

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/209 (66%), Positives = 156/209 (74%), Gaps = 4/209 (1%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R+GGSFAVWGGLFS  DCT+VY RQKEDPWNSI+AGA TGG LAMRQGL ASARSAAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEE--PVVATGFPSEDSASVGTSWLGGLLGRG-- 176
           V+LALIEGAGIALNKF+S QQP+P ++E+  P  +    + +    G  W GG  G    
Sbjct: 121 VLLALIEGAGIALNKFLSAQQPLPMMIEDMPPENSNSNANSEENKGGKPWFGGFGGIFGQ 180

Query: 177 KKEDPRESARSQTKILESFDAPPVPNFEY 205
           K+E+      S+ K+LESFDAPPVPNFEY
Sbjct: 181 KEEEKIGGGGSEVKVLESFDAPPVPNFEY 209


>Medtr6g088745.2 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33881252 | 20130731
          Length = 210

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/209 (66%), Positives = 156/209 (74%), Gaps = 4/209 (1%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R+GGSFAVWGGLFS  DCT+VY RQKEDPWNSI+AGA TGG LAMRQGL ASARSAAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEE--PVVATGFPSEDSASVGTSWLGGLLGRG-- 176
           V+LALIEGAGIALNKF+S QQP+P ++E+  P  +    + +    G  W GG  G    
Sbjct: 121 VLLALIEGAGIALNKFLSAQQPLPMMIEDMPPENSNSNANSEENKGGKPWFGGFGGIFGQ 180

Query: 177 KKEDPRESARSQTKILESFDAPPVPNFEY 205
           K+E+      S+ K+LESFDAPPVPNFEY
Sbjct: 181 KEEEKIGGGGSEVKVLESFDAPPVPNFEY 209


>Medtr6g088745.1 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33879549 | 20130731
          Length = 210

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 138/209 (66%), Positives = 156/209 (74%), Gaps = 4/209 (1%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLHNSPNGQRFLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGL+NSP G RF GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSACDCTLVYARQKEDPWNSILAGATTGGILAMRQGLRASARSAAFGG 120
           R+GGSFAVWGGLFS  DCT+VY RQKEDPWNSI+AGA TGG LAMRQGL ASARSAAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VVLALIEGAGIALNKFISTQQPMPELMEE--PVVATGFPSEDSASVGTSWLGGLLGRG-- 176
           V+LALIEGAGIALNKF+S QQP+P ++E+  P  +    + +    G  W GG  G    
Sbjct: 121 VLLALIEGAGIALNKFLSAQQPLPMMIEDMPPENSNSNANSEENKGGKPWFGGFGGIFGQ 180

Query: 177 KKEDPRESARSQTKILESFDAPPVPNFEY 205
           K+E+      S+ K+LESFDAPPVPNFEY
Sbjct: 181 KEEEKIGGGGSEVKVLESFDAPPVPNFEY 209