Miyakogusa Predicted Gene

Lj2g3v0824690.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0824690.1 Non Characterized Hit- tr|G7L856|G7L856_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,45.12,5e-18,seg,NULL,CUFF.35515.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088280.1 | hypothetical protein | HC | chr6:33431538-3343...   131   3e-31
Medtr8g102890.1 | hypothetical protein | HC | chr8:43337060-4333...    59   2e-09

>Medtr6g088280.1 | hypothetical protein | HC |
           chr6:33431538-33434462 | 20130731
          Length = 191

 Score =  131 bits (329), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 73/154 (47%), Positives = 89/154 (57%), Gaps = 4/154 (2%)

Query: 2   GSSYFGEPNMGNNERVXXXXXXXXXXXXXXXXXXXXRGLGVAQLEKIRLHGQMAYGFHPL 61
           GS+YFG+ NMGN ERV                    RGLGVAQLEKIRLHG+M YGFHP 
Sbjct: 3   GSNYFGDSNMGN-ERVSGSSSRKGKKNHQDKPKQPQRGLGVAQLEKIRLHGEMGYGFHPP 61

Query: 62  HQGSFPSNLNNEDPRVQTPXXXXXXXXXXXXXXXXXXXXXXHGFQPNLVIGLPEYERSSM 121
                PSN  NEDPR+QTP                      HGFQPN+++GLP+Y+R+++
Sbjct: 62  LHNPHPSNFINEDPRIQTP-YSSIPSSSFSYSSSSTSYSASHGFQPNIMMGLPQYDRTNI 120

Query: 122 GYGVSQPT--STTRWEQANTIAQPNTTRPLLNLY 153
            +G SQP   S+  WE AN  +Q  TT+PLLNLY
Sbjct: 121 RFGDSQPVFDSSRLWEHANATSQSTTTKPLLNLY 154


>Medtr8g102890.1 | hypothetical protein | HC |
           chr8:43337060-43339889 | 20130731
          Length = 258

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 74/176 (42%), Gaps = 45/176 (25%)

Query: 2   GSSYFGEPNMG------NNERVXXXXXXXXXXXXXXXXXXXXRGLGVAQLEKIRLHGQMA 55
            S+YFGEPN+G      ++                       RGLGVAQLEKIRLH Q+ 
Sbjct: 3   SSNYFGEPNLGYERGNGSSSSSSYTSSRKGKKSNSDKPKQPQRGLGVAQLEKIRLHTQLP 62

Query: 56  YGF----------HPLHQGSFPSNLN-NEDPRVQTPXXXXXXXXXXXXXXXXXXXXXXHG 104
             +           P H     S+ N NED +                          + 
Sbjct: 63  PPYHHPPTPYNYNQPSH-----SHFNYNEDQKA------------IQMSYSSSYSPNSYA 105

Query: 105 FQPNL-VIGLPEYERSSMGYGVSQPTSTTRWEQANTI------AQPNTTRPLLNLY 153
           FQP+  ++GLPEYER+++ YG S P    RW+  N I      +Q N T+P LNLY
Sbjct: 106 FQPHSNMMGLPEYERTNITYGDSYP----RWQHGNVISENQYPSQTNITQPFLNLY 157