Miyakogusa Predicted Gene

Lj2g3v0824590.2
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0824590.2 Non Characterized Hit- tr|I1L4K7|I1L4K7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58295 PE,76.68,0,FAMILY
NOT NAMED,NULL; AUX_IAA,AUX/IAA protein; CAD & PB1 domains,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisa,CUFF.35504.2
         (304 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |...   431   e-121
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332...   353   2e-97
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |...   325   3e-89
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |...   296   2e-80
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |...   296   2e-80
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |...   283   1e-76
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284...   268   7e-72
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |...   218   6e-57
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |...   217   1e-56
Medtr6g488150.2 | auxin response factor | HC | chr6:33216341-332...   215   4e-56
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |...   208   5e-54
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |...   206   2e-53
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |...   199   3e-51
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |...   197   8e-51
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |...   164   1e-40
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |...   157   1e-38
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150...   152   3e-37
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339...   151   6e-37
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338...   151   6e-37
Medtr5g067350.2 | auxin response factor | HC | chr5:28450190-284...   142   3e-34
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300...   129   3e-30
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150...   124   8e-29
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |...   117   2e-26
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |...   116   3e-26
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |...   116   3e-26
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |...   116   3e-26
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |...   116   3e-26
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |...   116   3e-26
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568...   111   7e-25
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568...   111   8e-25
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |...    78   1e-14
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |...    74   2e-13
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |...    70   3e-12
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |...    68   1e-11
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |...    67   2e-11
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |...    64   2e-10
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |...    55   1e-07
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033...    50   2e-06
Medtr8g100050.1 | auxin response factor 2 | HC | chr8:40230869-4...    50   3e-06
Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |...    50   4e-06

>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
           chr8:43394828-43391289 | 20130731
          Length = 293

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/310 (74%), Positives = 251/310 (80%), Gaps = 23/310 (7%)

Query: 1   MSVPLEQGYVGIGEVHNTMEGSEKFAERTSSGLNLKATELRLGLPGSESPERELGVSMLK 60
           MSVP+EQGY   GEV  +ME  E+     S GLNLKATELRLGLPGSESPERE G  +LK
Sbjct: 1   MSVPVEQGY---GEVP-SMETKER-----SIGLNLKATELRLGLPGSESPERENG-GVLK 50

Query: 61  SLVSGAKRGFSDAI-DGGSGKWVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADCNK 119
           SLVSGAKRGFSDAI DGGSGKWVLSGNGGSEVGL KD +LFSPK  G       + +CN 
Sbjct: 51  SLVSGAKRGFSDAITDGGSGKWVLSGNGGSEVGLCKDGNLFSPKAKG-------VGECNN 103

Query: 120 QQQ----ASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKND 175
           QQ     + V K+ VT S K L++ K Q+S P +K QVVGWPPIRSFRKNSM SQPQKND
Sbjct: 104 QQNPFSASVVVKETVTHSPKPLHDNKPQVSPPSSKAQVVGWPPIRSFRKNSMVSQPQKND 163

Query: 176 GDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSH 235
            D EA S CLYVKVSM+GAPYLRKVDL  F +YR+LSSALEKMFSCFTISQCGS+G S  
Sbjct: 164 ADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCR 223

Query: 236 DK-LSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAP 294
           +K LSESRL+DLLHGSEYVLTYEDKDGDWMLVGDVPW MFT+SCKRLRIMKSSEAIGLAP
Sbjct: 224 EKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAP 283

Query: 295 RSMEKCKSRN 304
           R+MEKCKSRN
Sbjct: 284 RAMEKCKSRN 293


>Medtr6g488150.1 | auxin response factor | HC |
           chr6:33216291-33219398 | 20130731
          Length = 254

 Score =  353 bits (905), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 191/297 (64%), Positives = 207/297 (69%), Gaps = 54/297 (18%)

Query: 19  MEGSEKFAERTSSGLNLKATELRLGLPGSESPERE---------LGVSMLKSLVSGAKRG 69
           ME SE F++R+++GLNLKATELRLGLPGSESPER+           + ML SL SGAKRG
Sbjct: 1   MESSEIFSQRSNNGLNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRG 60

Query: 70  FSDAIDGGSGKWVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDK 129
           FSDAID                                          +  QQ SV KD+
Sbjct: 61  FSDAIDMRK---------------------------------------SSNQQGSVAKDQ 81

Query: 130 VTQSIKSLNEKK-AQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGD-VEATSGCLYV 187
                  LNEKK +QIS   AKEQVVGWPPIRSFRKNSM +Q QKND D VEA SGCLYV
Sbjct: 82  TN----PLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGCLYV 137

Query: 188 KVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLL 247
           KVSMDGAPYLRKVDLK F TY++LSSALEKMFSCFTISQ GSHG      + ESRL+DLL
Sbjct: 138 KVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQFGSHGVFGQGNVCESRLMDLL 197

Query: 248 HGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSRN 304
           HGSEYVLTYEDKDGDWMLVGDVPW MF DSCKRLRIMKSSEAIGLAPR+MEKCKSRN
Sbjct: 198 HGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRLRIMKSSEAIGLAPRAMEKCKSRN 254


>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43637105-43634220 | 20130731
          Length = 326

 Score =  325 bits (834), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/344 (55%), Positives = 221/344 (64%), Gaps = 58/344 (16%)

Query: 1   MSVPLEQGYVGIGEVHNTMEGSEKFAERTSSGLNLKATELRLGLPGSESPEREL------ 54
           MS PLE  Y+G+         +    ++TSS LN K TELRLGLPG ESP+R+       
Sbjct: 1   MSTPLEHDYIGLA--------NNPSMDKTSSSLNFKETELRLGLPGCESPDRKSVSAAGA 52

Query: 55  --GVSM--------------LKSLVS--GAKRGFSDAIDGGSGKWVLSGNGGSEVGLGKD 96
             GVS               LK+LV+  GAKRGFSDAID  S KW  S N GSE G    
Sbjct: 53  GGGVSFFANKDLKSINVCSPLKNLVASVGAKRGFSDAIDESSKKWSFSMNDGSEGG---- 108

Query: 97  CSLFSPKGVGAAGKALAIADCNKQQQASVGK--DKVTQSIK-----SLNEKKAQIS---- 145
            SLFSP+G G  GK LA      + Q ++ K     T++IK     S++EK  Q+S    
Sbjct: 109 -SLFSPRG-GNVGKPLA----GLETQTNIQKINTNATKNIKEVLHQSVHEKNKQVSGTNE 162

Query: 146 ---APVAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATS--GCLYVKVSMDGAPYLRKV 200
              AP AK QVVGWPPIRSFRKN+M S   KN+ + E      CLYVKVSMDGAPYLRKV
Sbjct: 163 HANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYLRKV 222

Query: 201 DLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKD 260
           DLK +  Y +LSSALEKMF+CFTI QC S G    D LSES L DLLHGSEYVLTYEDKD
Sbjct: 223 DLKTYNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKD 282

Query: 261 GDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSRN 304
           GDWMLVGDVPW MF DSC+RLRIMK S+AIGLAPR+MEK +S+N
Sbjct: 283 GDWMLVGDVPWGMFADSCRRLRIMKGSDAIGLAPRAMEKSRSQN 326


>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
           chr5:13126019-13120497 | 20130731
          Length = 335

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/335 (49%), Positives = 213/335 (63%), Gaps = 46/335 (13%)

Query: 1   MSVPLEQGYVGIGE---VHNTMEGSEKFAERTSSGLNLKATELRLGLPGSESPERELGVS 57
           +S  +E+ Y+G+ +   V +         +     LNLKATELRLGLPGS+SPERE+   
Sbjct: 16  LSSTMERNYLGLSDCSSVDSCDSTLPSLCDEKKVNLNLKATELRLGLPGSQSPEREMDSD 75

Query: 58  --------------------MLKSLVSGAKRGFSDAIDGGS-GKWVLSGNGGSEVGLGKD 96
                               + K++VSG KRGF+D +DG S GK+  +GN G  V     
Sbjct: 76  FYLTKLDEKPLFPLLPAKDGLQKNVVSGNKRGFADTVDGFSQGKF--NGNTGINV----- 128

Query: 97  CSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQIS-----APVAKE 151
             + SP+  GA    +      K+  + V +++   +  +     A  +     AP +K 
Sbjct: 129 --MLSPRPAGAQASTV------KEMPSKVLQERPCAARGTAGHNHAGAASVAGCAPASKA 180

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATSG--CLYVKVSMDGAPYLRKVDLKHFVTYR 209
           QVVGWPPIRSFRKNSM +  + N+ +V+   G   L+VKVSMDGAPYLRKVDL+ + TY+
Sbjct: 181 QVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRTYATYQ 240

Query: 210 DLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDV 269
            LSSALEKMFSCFT+ QCGSHGA   + +SES+L DLLHGSEYVLTYEDKDGDWMLVGDV
Sbjct: 241 QLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDWMLVGDV 300

Query: 270 PWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSRN 304
           PW MF D+C+RL+IMK S+AIGLAPR+MEK KSR+
Sbjct: 301 PWEMFIDTCRRLKIMKGSDAIGLAPRAMEKSKSRS 335


>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
           chr5:13126144-13120365 | 20130731
          Length = 335

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/335 (49%), Positives = 213/335 (63%), Gaps = 46/335 (13%)

Query: 1   MSVPLEQGYVGIGE---VHNTMEGSEKFAERTSSGLNLKATELRLGLPGSESPERELGVS 57
           +S  +E+ Y+G+ +   V +         +     LNLKATELRLGLPGS+SPERE+   
Sbjct: 16  LSSTMERNYLGLSDCSSVDSCDSTLPSLCDEKKVNLNLKATELRLGLPGSQSPEREMDSD 75

Query: 58  --------------------MLKSLVSGAKRGFSDAIDGGS-GKWVLSGNGGSEVGLGKD 96
                               + K++VSG KRGF+D +DG S GK+  +GN G  V     
Sbjct: 76  FYLTKLDEKPLFPLLPAKDGLQKNVVSGNKRGFADTVDGFSQGKF--NGNTGINV----- 128

Query: 97  CSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQIS-----APVAKE 151
             + SP+  GA    +      K+  + V +++   +  +     A  +     AP +K 
Sbjct: 129 --MLSPRPAGAQASTV------KEMPSKVLQERPCAARGTAGHNHAGAASVAGCAPASKA 180

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATSG--CLYVKVSMDGAPYLRKVDLKHFVTYR 209
           QVVGWPPIRSFRKNSM +  + N+ +V+   G   L+VKVSMDGAPYLRKVDL+ + TY+
Sbjct: 181 QVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLRTYATYQ 240

Query: 210 DLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDV 269
            LSSALEKMFSCFT+ QCGSHGA   + +SES+L DLLHGSEYVLTYEDKDGDWMLVGDV
Sbjct: 241 QLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDWMLVGDV 300

Query: 270 PWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSRN 304
           PW MF D+C+RL+IMK S+AIGLAPR+MEK KSR+
Sbjct: 301 PWEMFIDTCRRLKIMKGSDAIGLAPRAMEKSKSRS 335


>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
           chr8:28204029-28199991 | 20130731
          Length = 356

 Score =  283 bits (724), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/329 (48%), Positives = 204/329 (62%), Gaps = 49/329 (14%)

Query: 6   EQGYVGIGEVHNTMEGS-EKFAERTSSGLNLKATELRLGLPGSESPERELGVSML----- 59
           E+ Y+G+ +  +    +    ++     LNLKATELRLGLPGS+SPER+L +  L     
Sbjct: 47  ERNYLGLSDCSSVDSSTVPSLSDEKKENLNLKATELRLGLPGSQSPERDLDLFPLNSTKL 106

Query: 60  --------------------KSLVSGAKRGFSDAID-GGSGKWVLSGNGGSEVGLGKDCS 98
                               K++VSG KRGF+D ++     K+       + V +     
Sbjct: 107 DEKPLFPLLPTKDGICSLSQKTVVSGNKRGFADTLEVFPEAKYT----ANTRVNI----- 157

Query: 99  LFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQIS--APVAKEQVVGW 156
           L SP+  GA    +            + K  V +S  + N   A IS  AP AK QVVGW
Sbjct: 158 LLSPRPSGAQPTTIK----------EMPKKVVQESPCTANGTGAPISGSAPAAKAQVVGW 207

Query: 157 PPIRSFRKNSMTSQPQKNDG-DVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSAL 215
           PPIRSFRKNS+ +  + ND  D +  +  L+VKVSMDGAPYLRKVDL+++ TY++LSS L
Sbjct: 208 PPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVDLRNYTTYQELSSDL 267

Query: 216 EKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFT 275
           EKMFSCFT+ QCGSHG    + LSES+L D LHGSEYV+TYEDKDGDWMLVGDVPW MF 
Sbjct: 268 EKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGSEYVVTYEDKDGDWMLVGDVPWDMFI 327

Query: 276 DSCKRLRIMKSSEAIGLAPRSMEKCKSRN 304
           D+CKRL+IMK S+AIGLAPR+MEK KSR+
Sbjct: 328 DTCKRLKIMKGSDAIGLAPRAMEKSKSRS 356


>Medtr5g067350.1 | auxin response factor | HC |
           chr5:28450190-28454050 | 20130731
          Length = 347

 Score =  268 bits (684), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 162/312 (51%), Positives = 192/312 (61%), Gaps = 49/312 (15%)

Query: 23  EKFAERTSSGLNLKATELRLGLPGSESPERELGVSMLKS--------------------- 61
           + F + T S LNLKATELRLGLPGS SPER+     L+S                     
Sbjct: 55  QSFKDETKSNLNLKATELRLGLPGSLSPERDSSDFCLRSSKQFDEKPLFPLHPQKDDHLF 114

Query: 62  ----LVSGAKRGFSDAIDGGSGKWVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADC 117
                V G KRGFSDA+           N  SE G  K  S       G   KA  IA  
Sbjct: 115 ESKPAVLGNKRGFSDAM-----------NVFSE-GKLKPSSKMLENVAGQKVKADEIATV 162

Query: 118 NKQQQASVGKDKVTQSIKSLN--EKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKND 175
               +   G   V +S   LN        +AP +K QVVGWPPIRSFRKNS+T+   KN 
Sbjct: 163 KIGLERPNG---VGESKPGLNGSANNGNSTAPASKAQVVGWPPIRSFRKNSLTTA-SKNT 218

Query: 176 GDVEA---TSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGA 232
            +V+    + G ++VKVSMDGAPYLRKVDLK++  Y +LSS+LEKMFSCFTI QC SHG 
Sbjct: 219 EEVDGKLGSGGAVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHG- 277

Query: 233 SSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGL 292
             +  L+E++L DLLHGSEYV+TYEDKDGDWMLVGDVPW MF D+C+RLRIMKSS+AIGL
Sbjct: 278 --NQMLNETKLRDLLHGSEYVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKSSDAIGL 335

Query: 293 APRSMEKCKSRN 304
           APR++EK KSRN
Sbjct: 336 APRAVEKSKSRN 347


>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:35977175-35973245 | 20130731
          Length = 253

 Score =  218 bits (555), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 136/290 (46%), Positives = 167/290 (57%), Gaps = 56/290 (19%)

Query: 26  AERTSSGL-NLKATELRLGLPGS----ESPERELGVSMLKSLVSGAKRGFSDAIDGGSGK 80
           AER    L N + TELRLGLPG+    ESP +           S  KRGFS+        
Sbjct: 7   AERDKYSLINFEETELRLGLPGAGDHGESPVKN----------SCGKRGFSET------- 49

Query: 81  WVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEK 140
                   + V L  + S  +         + + +        + GKD  T +  S    
Sbjct: 50  --------ANVDLKLNLSPIN--------DSASSSSTIASVAENKGKDTTTSATVS---- 89

Query: 141 KAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGC-------LYVKVSMDG 193
                 P AK QVVGWPP+RSFRKN +    QK++ + E             +VKVSMDG
Sbjct: 90  ----PPPRAKAQVVGWPPVRSFRKNIVNVH-QKSNSETEVDKSISGGGGNGAFVKVSMDG 144

Query: 194 APYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYV 253
           APYLRKVDLK + +Y++LS AL KMFS FTI  CGS    + D ++ES+LIDLL+GS+YV
Sbjct: 145 APYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQ--VTKDFMNESKLIDLLNGSDYV 202

Query: 254 LTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSR 303
            TYEDKDGDWMLVGDVPW MF  SCKRLRIMK SEAIGLAPR++EKCK+R
Sbjct: 203 PTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLAPRAVEKCKNR 252


>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903552-33900363 | 20130731
          Length = 236

 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/276 (48%), Positives = 160/276 (57%), Gaps = 51/276 (18%)

Query: 32  GLNLKATELRLGLPGSESPERELGVSMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEV 91
           GLNLK TEL LGLPG        G  +     SG KRGFS+ +                 
Sbjct: 7   GLNLKETELCLGLPGGGGGGGGGGSEVETPRASG-KRGFSETV----------------- 48

Query: 92  GLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKE 151
               D  L                  N Q +  + +   ++  K+L +  A+   P AK 
Sbjct: 49  ----DLKL------------------NLQTKEDLNEKSASKE-KTLLKDPAK---PPAKA 82

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATS----GCLYVKVSMDGAPYLRKVDLKHFVT 207
           QVVGWPP+RS+RKN M +Q   N  D E T+       +VKVSMDGAPYLRKVDL  + T
Sbjct: 83  QVVGWPPVRSYRKN-MMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKT 141

Query: 208 YRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVG 267
           Y+DLS AL KMFS FT    G+ G    D ++ES+L+DLL+ SEYV TYEDKDGDWMLVG
Sbjct: 142 YKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVG 199

Query: 268 DVPWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSR 303
           DVPW MF  SCKRLRIMK SEAIGLAPR+MEKCK+R
Sbjct: 200 DVPWEMFVGSCKRLRIMKGSEAIGLAPRAMEKCKNR 235


>Medtr6g488150.2 | auxin response factor | HC |
           chr6:33216341-33219347 | 20130731
          Length = 193

 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/219 (57%), Positives = 138/219 (63%), Gaps = 54/219 (24%)

Query: 19  MEGSEKFAERTSSGLNLKATELRLGLPGSESPERE---------LGVSMLKSLVSGAKRG 69
           ME SE F++R+++GLNLKATELRLGLPGSESPER+           + ML SL SGAKRG
Sbjct: 1   MESSEIFSQRSNNGLNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRG 60

Query: 70  FSDAIDGGSGKWVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDK 129
           FSDAID                                             QQ SV KD+
Sbjct: 61  FSDAIDMRKSS---------------------------------------NQQGSVAKDQ 81

Query: 130 VTQSIKSLNEKK-AQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGD-VEATSGCLYV 187
                  LNEKK +QIS   AKEQVVGWPPIRSFRKNSM +Q QKND D VEA SGCLYV
Sbjct: 82  TN----PLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKSGCLYV 137

Query: 188 KVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQ 226
           KVSMDGAPYLRKVDLK F TY++LSSALEKMFSCFTIS+
Sbjct: 138 KVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISE 176


>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
           chr7:38527122-38532646 | 20130731
          Length = 250

 Score =  208 bits (530), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 135/188 (71%), Gaps = 7/188 (3%)

Query: 121 QQASVGKDKVTQSIKSLNEKKAQISA----PVAKEQVVGWPPIRSFRKNSMTSQPQKNDG 176
           ++A+   D    + K+L ++K  + A    P AK QVVGWPP+RS+RKN +  Q  +++ 
Sbjct: 64  KEATAEVDPSDITTKTLQKEKTLLPADPAKPPAKAQVVGWPPVRSYRKNMLAMQKSESEK 123

Query: 177 DVEATSGCL-YVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSH 235
           +  +    + +VKVSMDGAPYLRKVDLK + +Y  LS +L KMFS FTI  C S G    
Sbjct: 124 NSSSNFNAITFVKVSMDGAPYLRKVDLKMYTSYSQLSDSLGKMFSSFTIGNCESQGM--K 181

Query: 236 DKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPR 295
           D ++ES+L+DLL+ S+YV TYEDKDGDWMLVGDVPW MF +SCKRLRIMK  EAIG+APR
Sbjct: 182 DFMNESKLMDLLNNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGIAPR 241

Query: 296 SMEKCKSR 303
           +MEKCK+R
Sbjct: 242 AMEKCKNR 249


>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:31340838-31337022 | 20130731
          Length = 245

 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 103/166 (62%), Positives = 123/166 (74%), Gaps = 10/166 (6%)

Query: 145 SAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEA------TSGCLYVKVSMDGAPYLR 198
           + P AK QVVGWPP+RSFRKN   +Q + N+G  E+       +   +VKVSMDGAPYLR
Sbjct: 82  AKPPAKAQVVGWPPVRSFRKNMFAAQ-KSNEGSEESEKKNSNNNPISFVKVSMDGAPYLR 140

Query: 199 KVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSES-RLIDLLHGSEYVLTYE 257
           KVDLK + +Y +LS AL KMF+ FT   C S G    D ++ES +L+DLL+ S+YV TYE
Sbjct: 141 KVDLKMYKSYPELSDALAKMFNSFTTGNCESQGI--KDFMNESNKLMDLLNSSDYVPTYE 198

Query: 258 DKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPRSMEKCKSR 303
           DKDGDWMLVGDVPW MF DSCKRLRIMK  EAIGLAPR+MEKCK+R
Sbjct: 199 DKDGDWMLVGDVPWEMFIDSCKRLRIMKGKEAIGLAPRAMEKCKNR 244


>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:35977175-35973245 | 20130731
          Length = 243

 Score =  199 bits (506), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 128/279 (45%), Positives = 157/279 (56%), Gaps = 56/279 (20%)

Query: 26  AERTSSGL-NLKATELRLGLPGS----ESPERELGVSMLKSLVSGAKRGFSDAIDGGSGK 80
           AER    L N + TELRLGLPG+    ESP +           S  KRGFS+        
Sbjct: 7   AERDKYSLINFEETELRLGLPGAGDHGESPVKN----------SCGKRGFSET------- 49

Query: 81  WVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEK 140
                   + V L  + S  +         + + +        + GKD  T +  S    
Sbjct: 50  --------ANVDLKLNLSPIN--------DSASSSSTIASVAENKGKDTTTSATVS---- 89

Query: 141 KAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGC-------LYVKVSMDG 193
                 P AK QVVGWPP+RSFRKN + +  QK++ + E             +VKVSMDG
Sbjct: 90  ----PPPRAKAQVVGWPPVRSFRKN-IVNVHQKSNSETEVDKSISGGGGNGAFVKVSMDG 144

Query: 194 APYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYV 253
           APYLRKVDLK + +Y++LS AL KMFS FTI  CGS    + D ++ES+LIDLL+GS+YV
Sbjct: 145 APYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQ--VTKDFMNESKLIDLLNGSDYV 202

Query: 254 LTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGL 292
            TYEDKDGDWMLVGDVPW MF  SCKRLRIMK SEAIGL
Sbjct: 203 PTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGL 241


>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903552-33900946 | 20130731
          Length = 239

 Score =  197 bits (502), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/265 (46%), Positives = 148/265 (55%), Gaps = 51/265 (19%)

Query: 32  GLNLKATELRLGLPGSESPERELGVSMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEV 91
           GLNLK TEL LGLPG        G  +     SG KRGFS+ +D                
Sbjct: 7   GLNLKETELCLGLPGGGGGGGGGGSEVETPRASG-KRGFSETVD---------------- 49

Query: 92  GLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKE 151
                                     N Q +  + +   ++  K+L +  A+   P AK 
Sbjct: 50  -----------------------LKLNLQTKEDLNEKSASKE-KTLLKDPAK---PPAKA 82

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATS----GCLYVKVSMDGAPYLRKVDLKHFVT 207
           QVVGWPP+RS+RKN M +Q   N  D E T+       +VKVSMDGAPYLRKVDL  + T
Sbjct: 83  QVVGWPPVRSYRKN-MMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKT 141

Query: 208 YRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVG 267
           Y+DLS AL KMFS FT    G+ G    D ++ES+L+DLL+ SEYV TYEDKDGDWMLVG
Sbjct: 142 YKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVG 199

Query: 268 DVPWVMFTDSCKRLRIMKSSEAIGL 292
           DVPW MF  SCKRLRIMK SEAIGL
Sbjct: 200 DVPWEMFVGSCKRLRIMKGSEAIGL 224


>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903407-33900363 | 20130731
          Length = 204

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 132/244 (54%), Gaps = 51/244 (20%)

Query: 32  GLNLKATELRLGLPGSESPERELGVSMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEV 91
           GLNLK TEL LGLPG        G  +     SG KRGFS+ +                 
Sbjct: 7   GLNLKETELCLGLPGGGGGGGGGGSEVETPRASG-KRGFSETV----------------- 48

Query: 92  GLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKE 151
               D  L                  N Q +  + +   ++  K+L +  A+   P AK 
Sbjct: 49  ----DLKL------------------NLQTKEDLNEKSASKE-KTLLKDPAK---PPAKA 82

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATS----GCLYVKVSMDGAPYLRKVDLKHFVT 207
           QVVGWPP+RS+RKN M +Q   N  D E T+       +VKVSMDGAPYLRKVDL  + T
Sbjct: 83  QVVGWPPVRSYRKN-MMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKT 141

Query: 208 YRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVG 267
           Y+DLS AL KMFS FT    G+ G    D ++ES+L+DLL+ SEYV TYEDKDGDWMLVG
Sbjct: 142 YKDLSDALAKMFSSFTTGNYGAQGMI--DFMNESKLMDLLNSSEYVPTYEDKDGDWMLVG 199

Query: 268 DVPW 271
           DVPW
Sbjct: 200 DVPW 203


>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:31369872-31371491 | 20130731
          Length = 204

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/261 (40%), Positives = 129/261 (49%), Gaps = 72/261 (27%)

Query: 33  LNLKATELRLGLPGSESPER-ELGVSMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEV 91
           +NLKATELRLGLPGS+  E+     S+L++    +    SD +D  S   + S NG S  
Sbjct: 12  MNLKATELRLGLPGSDEVEKLPCNFSVLRNNKRSSPEEASD-VDSISKSKLNSSNGSSHT 70

Query: 92  GLGKDCSLFSPKGVGAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKE 151
                                                              Q +AP +K 
Sbjct: 71  -----------------------------------------------TNDDQDNAPPSKA 83

Query: 152 QVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDL 211
           QVVGWPPIRS+RKNS+  +  +  G        +Y+KVSM GAPYLRK+DLK + +Y +L
Sbjct: 84  QVVGWPPIRSYRKNSLQQKKGEEVG--------MYLKVSMAGAPYLRKIDLKVYKSYSEL 135

Query: 212 SSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPW 271
              LE MF C TI +                     +GSE+V TYEDKDGDWMLVGDVPW
Sbjct: 136 LKVLENMFKC-TIGEYSEREG--------------YNGSEFVPTYEDKDGDWMLVGDVPW 180

Query: 272 VMFTDSCKRLRIMKSSEAIGL 292
            MF  SCKRLRIMK SEA GL
Sbjct: 181 EMFMSSCKRLRIMKGSEAKGL 201


>Medtr1g040675.1 | auxin response factor | HC |
           chr1:15063378-15065770 | 20130731
          Length = 186

 Score =  152 bits (385), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/182 (47%), Positives = 108/182 (59%), Gaps = 27/182 (14%)

Query: 113 AIADCNKQQQASVGKDKVTQSIKSLNEKKAQIS--APVAKEQVVGWPPIRSFRKNSMTSQ 170
           ++   NK+Q     ++ V+ S  S +++  + S  AP AK ++VGWPPIRS+RKN++   
Sbjct: 26  SVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTLQ-- 83

Query: 171 PQKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSH 230
                   EA  G +YVKVSMDGAPYLRK+DL+ +  Y +L  ALE MF   TI +    
Sbjct: 84  --------EAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFK-LTIGEYSER 134

Query: 231 GASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAI 290
                             GSEY  TYEDKDGDWMLVGDVPW MF  SCKRLRIMK +EA 
Sbjct: 135 EG--------------YKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAR 180

Query: 291 GL 292
           GL
Sbjct: 181 GL 182


>Medtr1g076270.1 | auxin response factor | HC |
           chr1:33944737-33945503 | 20130731
          Length = 178

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 105/176 (59%), Gaps = 26/176 (14%)

Query: 118 NKQQQASV-GKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDG 176
           N++Q+A +  K  +T++ K    K +  +AP +K ++VGWPPIRS+RKNS+         
Sbjct: 28  NEEQKAKISNKRPLTETSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSLQ-------- 79

Query: 177 DVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHD 236
             EA +  +YVKVS+DGAPYLRK+DL+ +  Y  L  ALE MF     +     G     
Sbjct: 80  --EAEASGIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKEG----- 132

Query: 237 KLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGL 292
                       GSEY  TYEDKDGDWMLVGDVPW MF  SCKRLRIMK +EA G+
Sbjct: 133 ----------YKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTEARGV 178


>Medtr1g093350.1 | auxin response factor | HC |
           chr1:33849453-33847986 | 20130731
          Length = 178

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 82/176 (46%), Positives = 105/176 (59%), Gaps = 26/176 (14%)

Query: 118 NKQQQASV-GKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDG 176
           N++Q+A +  K  +T++ K    K +  +AP +K ++VGWPPIRS+RKNS+         
Sbjct: 28  NEEQKAKISNKRPLTETSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSLQ-------- 79

Query: 177 DVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHD 236
             EA +  +YVKVS+DGAPYLRK+DL+ +  Y  L  ALE MF     +     G     
Sbjct: 80  --EAEASGIYVKVSLDGAPYLRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKEG----- 132

Query: 237 KLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGL 292
                       GSEY  TYEDKDGDWMLVGDVPW MF  SCKRLRIMK +EA G+
Sbjct: 133 ----------YKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLRIMKGTEARGV 178


>Medtr5g067350.2 | auxin response factor | HC |
           chr5:28450190-28454050 | 20130731
          Length = 272

 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/231 (42%), Positives = 123/231 (53%), Gaps = 44/231 (19%)

Query: 23  EKFAERTSSGLNLKATELRLGLPGSESPERELGVSMLKS--------------------- 61
           + F + T S LNLKATELRLGLPGS SPER+     L+S                     
Sbjct: 55  QSFKDETKSNLNLKATELRLGLPGSLSPERDSSDFCLRSSKQFDEKPLFPLHPQKDDHLF 114

Query: 62  ----LVSGAKRGFSDAIDGGS-GKWVLSGNGGSEVGLGKDCSLFSPKGVGAAGKALAIAD 116
                V G KRGFSDA++  S GK   S      V            G       +A   
Sbjct: 115 ESKPAVLGNKRGFSDAMNVFSEGKLKPSSKMLENVA-----------GQKVKADEIATVK 163

Query: 117 CNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDG 176
              ++   VG+ K   +  + N      +AP +K QVVGWPPIRSFRKNS+T+   KN  
Sbjct: 164 IGLERPNGVGESKPGLNGSANN---GNSTAPASKAQVVGWPPIRSFRKNSLTTA-SKNTE 219

Query: 177 DVEA---TSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTI 224
           +V+    + G ++VKVSMDGAPYLRKVDLK++  Y +LSS+LEKMFSCFTI
Sbjct: 220 EVDGKLGSGGAVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTI 270


>Medtr1g069495.1 | auxin response factor | HC |
           chr1:30104004-30099851 | 20130731
          Length = 272

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 99/182 (54%), Gaps = 34/182 (18%)

Query: 152 QVVGWPPIRSFRKNSMTSQPQ------------KNDGDVEATSG---------------- 183
           QVVGWPP+RS+R NS  +  +            KN+  V   S                 
Sbjct: 82  QVVGWPPLRSYRVNSFNANAKSTEAFNSVAEKSKNNNIVVRKSTDNGNDDNHINIKEKRN 141

Query: 184 ---CLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMF--SCFTISQCGSHGASSHDKL 238
                +VKV+MDG P  RKVDL    +Y  L+  LE MF  S  +++  GS+G   +   
Sbjct: 142 LRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSKGSNGEDHNMTT 201

Query: 239 SESRLIDLLHGS-EYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPRSM 297
              R   LL GS ++VLTYEDK+GDWMLVGDVPW MF  S +RLRIM++SEA GLAPR  
Sbjct: 202 RGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLE 261

Query: 298 EK 299
           EK
Sbjct: 262 EK 263


>Medtr1g040675.2 | auxin response factor | HC |
           chr1:15063472-15065737 | 20130731
          Length = 162

 Score =  124 bits (312), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 71/161 (44%), Positives = 92/161 (57%), Gaps = 27/161 (16%)

Query: 113 AIADCNKQQQASVGKDKVTQSIKSLNEKKAQIS--APVAKEQVVGWPPIRSFRKNSMTSQ 170
           ++   NK+Q     ++ V+ S  S +++  + S  AP AK ++VGWPPIRS+RKN++   
Sbjct: 26  SVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSAAPPAKAKIVGWPPIRSYRKNTLQ-- 83

Query: 171 PQKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSH 230
                   EA  G +YVKVSMDGAPYLRK+DL+ +  Y +L  ALE MF   TI +    
Sbjct: 84  --------EAEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLKALETMFK-LTIGEYSER 134

Query: 231 GASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPW 271
                             GSEY  TYEDKDGDWMLVGDVPW
Sbjct: 135 EG--------------YKGSEYAPTYEDKDGDWMLVGDVPW 161


>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:44155116-44156253 | 20130731
          Length = 198

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 12/109 (11%)

Query: 182 SGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFS--CFTISQCGSHGASSHDKLS 239
           S C YVKV++DGAPYLRKVDL+ +  Y +L +AL  MFS  CFTI          +D ++
Sbjct: 84  SICKYVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNCFTIR---------NDLMN 134

Query: 240 ESRLID-LLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSS 287
           E + +D   + +EY+ TYEDKDGDWML+GDVPW MF +SCKR+R+M SS
Sbjct: 135 EKKFMDSRKNTNEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183


>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:3041610-3037433 | 20130731
          Length = 178

 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/148 (50%), Positives = 91/148 (61%), Gaps = 30/148 (20%)

Query: 150 KEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYR 209
           K QVVGWPP+ S+RK +M      N+G        +Y+KVSMDGAPYLRK+DL     Y 
Sbjct: 52  KNQVVGWPPVCSYRKKNM------NEGSK------MYMKVSMDGAPYLRKIDLGLHKGYL 99

Query: 210 DLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDV 269
           +L+ ALEK+F C     CG   A     L ++         E+V  YEDKDGDWMLVGDV
Sbjct: 100 ELALALEKLFGC-----CGIEEA-----LKDA------DNCEHVPIYEDKDGDWMLVGDV 143

Query: 270 PWVMFTDSCKRLRIMKSSEA--IGLAPR 295
           PW MF +SCKRLRIMK S+A   GL P+
Sbjct: 144 PWEMFIESCKRLRIMKRSDAKGFGLQPK 171


>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340473-43336605 | 20130731
          Length = 269

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 28/194 (14%)

Query: 117 CNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKN----------- 165
           C K+ +   G +    ++ + ++K+   +AP     VVGWPPIRSFRKN           
Sbjct: 67  CPKRVELQNGDNNKVTAVSNTSQKR---TAPGP---VVGWPPIRSFRKNLATSSSSKPSP 120

Query: 166 --SMTSQPQKND-----GDVEATSG-CLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEK 217
             S T Q   N+       ++   G  L+VK++MDG P  RKVDL  + +Y +LSSA++ 
Sbjct: 121 PESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDD 180

Query: 218 MFSCFTISQCGSHGASSHDKLSESR--LIDLLHGS-EYVLTYEDKDGDWMLVGDVPWVMF 274
           +F     +Q  S     ++K  E    +  LL GS EY L YED +GD MLVGDVPW MF
Sbjct: 181 LFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 240

Query: 275 TDSCKRLRIMKSSE 288
             + KRLR++KS+E
Sbjct: 241 VSTVKRLRVLKSTE 254


>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340807-43336605 | 20130731
          Length = 269

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 28/194 (14%)

Query: 117 CNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKN----------- 165
           C K+ +   G +    ++ + ++K+   +AP     VVGWPPIRSFRKN           
Sbjct: 67  CPKRVELQNGDNNKVTAVSNTSQKR---TAPGP---VVGWPPIRSFRKNLATSSSSKPSP 120

Query: 166 --SMTSQPQKND-----GDVEATSG-CLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEK 217
             S T Q   N+       ++   G  L+VK++MDG P  RKVDL  + +Y +LSSA++ 
Sbjct: 121 PESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDD 180

Query: 218 MFSCFTISQCGSHGASSHDKLSESR--LIDLLHGS-EYVLTYEDKDGDWMLVGDVPWVMF 274
           +F     +Q  S     ++K  E    +  LL GS EY L YED +GD MLVGDVPW MF
Sbjct: 181 LFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 240

Query: 275 TDSCKRLRIMKSSE 288
             + KRLR++KS+E
Sbjct: 241 VSTVKRLRVLKSTE 254


>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340473-43336605 | 20130731
          Length = 269

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 106/194 (54%), Gaps = 28/194 (14%)

Query: 117 CNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKN----------- 165
           C K+ +   G +    ++ + ++K+   +AP     VVGWPPIRSFRKN           
Sbjct: 67  CPKRVELQNGDNNKVTAVSNTSQKR---TAPGP---VVGWPPIRSFRKNLATSSSSKPSP 120

Query: 166 --SMTSQPQKND-----GDVEATSG-CLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEK 217
             S T Q   N+       ++   G  L+VK++MDG P  RKVDL  + +Y +LSSA++ 
Sbjct: 121 PESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDD 180

Query: 218 MFSCFTISQCGSHGASSHDKLSESR--LIDLLHGS-EYVLTYEDKDGDWMLVGDVPWVMF 274
           +F     +Q  S     ++K  E    +  LL GS EY L YED +GD MLVGDVPW MF
Sbjct: 181 LFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 240

Query: 275 TDSCKRLRIMKSSE 288
             + KRLR++KS+E
Sbjct: 241 VSTVKRLRVLKSTE 254


>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340462-43336605 | 20130731
          Length = 268

 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/194 (38%), Positives = 104/194 (53%), Gaps = 28/194 (14%)

Query: 117 CNKQQQASVGKDKVTQSIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKN----------- 165
           C K+ +   G +    ++ + ++K+       A   VVGWPPIRSFRKN           
Sbjct: 67  CPKRVELQNGDNNKVTAVSNTSQKRT------APGPVVGWPPIRSFRKNLATSSSSKPSP 120

Query: 166 --SMTSQPQKND-----GDVEATSG-CLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEK 217
             S T Q   N+       ++   G  L+VK++MDG P  RKVDL  + +Y +LSSA++ 
Sbjct: 121 PESQTQQDMHNNVSAGKKPIDNNYGKGLFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDD 180

Query: 218 MFSCFTISQCGSHGASSHDKLSESR--LIDLLHGS-EYVLTYEDKDGDWMLVGDVPWVMF 274
           +F     +Q  S     ++K  E    +  LL GS EY L YED +GD MLVGDVPW MF
Sbjct: 181 LFRGLLKAQRDSSACGGNNKKEEEEKVITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 240

Query: 275 TDSCKRLRIMKSSE 288
             + KRLR++KS+E
Sbjct: 241 VSTVKRLRVLKSTE 254


>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
           | 20130731
          Length = 271

 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 17/157 (10%)

Query: 149 AKEQVVGWPPIRSFRKN---------SMTSQPQKNDG-------DVEATSGCLYVKVSMD 192
           A   VVGWPPIRSFRKN            S+P   D         +  +   L+VK++MD
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163

Query: 193 GAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGS-E 251
           G P  RK+D+  + +Y  LSSA++ +F         SHG +   +  ++ +   L GS E
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSGE 223

Query: 252 YVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSE 288
           Y L YED +GD MLVGDVPW MF  + KRLR+ KSS+
Sbjct: 224 YTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260


>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
           | 20130731
          Length = 268

 Score =  111 bits (278), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 86/157 (54%), Gaps = 17/157 (10%)

Query: 149 AKEQVVGWPPIRSFRKN---------SMTSQPQKNDG-------DVEATSGCLYVKVSMD 192
           A   VVGWPPIRSFRKN            S+P   D         +  +   L+VK++MD
Sbjct: 104 AASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNKPISNSGKGLFVKINMD 163

Query: 193 GAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGS-E 251
           G P  RK+D+  + +Y  LSSA++ +F         SHG +   +  ++ +   L GS E
Sbjct: 164 GVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMKGSLTGSGE 223

Query: 252 YVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMKSSE 288
           Y L YED +GD MLVGDVPW MF  + KRLR+ KSS+
Sbjct: 224 YTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260


>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:51327848-51326632 | 20130731
          Length = 184

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 24/140 (17%)

Query: 148 VAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVT 207
           + +E+   WPPI      S  ++ Q+           L+VKV M+G P  RK++L    +
Sbjct: 67  LPREETCDWPPINKSILRSTLAEKQR---------PSLFVKVYMEGIPIGRKLNLLEHHS 117

Query: 208 YRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVG 267
           Y  L  AL  MF   TI    S   +S               + +VLTYED++GDWM+VG
Sbjct: 118 YDGLIKALCHMFRT-TILCPNSQPLNS--------------WNFHVLTYEDQEGDWMMVG 162

Query: 268 DVPWVMFTDSCKRLRIMKSS 287
           DVPW MF  S KRL+I +++
Sbjct: 163 DVPWEMFLSSVKRLKITRAN 182


>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
           chr3:49381656-49382979 | 20130731
          Length = 213

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 27/143 (18%)

Query: 152 QVVGWPPIRSFRKNSMTSQP-----QKNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFV 206
            +VGWPPI+S+RK     Q      +K + +    S  LYVKV+M+G    R+++L+ + 
Sbjct: 88  HLVGWPPIKSWRKKEFHDQQLPEHIRKANENQNRRSKPLYVKVNMEGVGMGRQINLRLYN 147

Query: 207 TYRDLSSALEKMF-SCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWML 265
           +Y+ L  +L  MF  C    + G++                     Y LT+++K G+W L
Sbjct: 148 SYQTLKDSLISMFVKCQNFEETGAN---------------------YTLTFQNKQGEWKL 186

Query: 266 VGDVPWVMFTDSCKRLRIMKSSE 288
              + W  F  + +RL I+++ E
Sbjct: 187 TSHITWQSFIGTVRRLAILRNGE 209


>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:47460828-47458972 | 20130731
          Length = 208

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 36/145 (24%)

Query: 150 KEQVVGWPPIRSFRKNSMTSQPQKNDGDVE--------ATSGCLYVKVSMDGAPYLRKVD 201
           +E +VGWPP+   RK     + + N+ DVE        + +   YVKV M+G    RKV+
Sbjct: 90  EEALVGWPPVNCRRK-----KLRCNENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVN 144

Query: 202 LKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDG 261
           L    ++  L+  L  MF      +C       HD+             +Y L Y+DK+G
Sbjct: 145 LGMHHSFHTLNQTLMDMFE-----KC------DHDQ------------QQYELVYQDKEG 181

Query: 262 DWMLVGDVPWVMFTDSCKRLRIMKS 286
           DW+L  D+ W  F +  +RL+++KS
Sbjct: 182 DWLLAQDISWRSFIECAQRLKLLKS 206


>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:38333347-38334717 | 20130731
          Length = 176

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 18/120 (15%)

Query: 170 QPQKNDG----DVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTIS 225
           QP +  G    D    +   +VKV M+G P  RK++L     Y +L + LE+MF    + 
Sbjct: 65  QPIQQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTIL- 123

Query: 226 QCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMK 285
                  +  D +   R         +VLTYED +GD ++VGDVPW MF  S KRL+I +
Sbjct: 124 -----WGTEMDGVQSERC--------HVLTYEDGEGDLIMVGDVPWEMFLSSVKRLKITR 170


>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
           chr7:45409781-45408778 | 20130731
          Length = 161

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 19/129 (14%)

Query: 158 PIRSFRKNSMTSQPQ-KNDGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALE 216
           P + F   S  S+ Q + + D  +    LYVKV M+G P  RK+++    +Y +L   LE
Sbjct: 45  PTQHFHVGSSISRGQWQQNYDYNS----LYVKVYMEGIPIGRKLNILAHQSYHELVKTLE 100

Query: 217 KMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTD 276
            MF    +        +  D +   R         +VLTYED++GD ++VGDVPW MF  
Sbjct: 101 HMFDTTIL------WGNEMDGVQPERC--------HVLTYEDEEGDLVMVGDVPWEMFLS 146

Query: 277 SCKRLRIMK 285
           + KRL+I +
Sbjct: 147 TVKRLKITR 155


>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:49537832-49539058 | 20130731
          Length = 178

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 133 SIKSLNEKKAQISAPVAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGCLYVKVSMD 192
           S+ ++       SA +  + ++ WP +++ R  S+     +    V++     YVKV+MD
Sbjct: 34  SLGTVQHDAYHSSANLYDDDLMDWPNMKNSR--SVHENFDEEIEGVQSNERWAYVKVNMD 91

Query: 193 GAPYLRKVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEY 252
           G    RK+ +     Y  L+  LE MF   ++S           +L ES       GSEY
Sbjct: 92  GVSIGRKICILDHGGYSSLAIQLEDMFGSQSVSGI---------RLFES-------GSEY 135

Query: 253 VLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIMK 285
            L Y+D + +W  VGDV W  F +  KRLRI +
Sbjct: 136 SLFYKDSEDNWRTVGDVLWKEFVECVKRLRIAR 168


>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:38333347-38334717 | 20130731
          Length = 157

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 18/106 (16%)

Query: 170 QPQKNDG----DVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSCFTIS 225
           QP +  G    D    +   +VKV M+G P  RK++L     Y +L + LE+MF    + 
Sbjct: 65  QPIQQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTIL- 123

Query: 226 QCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPW 271
                  +  D +   R         +VLTYED +GD ++VGDVPW
Sbjct: 124 -----WGTEMDGVQSERC--------HVLTYEDGEGDLIMVGDVPW 156


>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
           | 20130731
          Length = 671

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 38/217 (17%)

Query: 83  LSGNGGSEVGLGKDCSLFSPKGV--GAAGKALAIADCNKQQQASVGKDKVTQSIKSLNEK 140
           L  +G    G G  C LF  + +    A ++L  A  + +    VG D+   S+ SL+ +
Sbjct: 456 LEESGEKRQGTGNGCRLFGIQLLENSNAEESLQTAPLSGR----VGDDR---SVPSLDVE 508

Query: 141 KAQISAP--VAKEQVVGWPPIRSFRKNSMTSQPQKNDGDVEATSGCLYVKVSMDGAPYLR 198
             Q S P  V +  +   P +      S    PQ++         C   KV M G    R
Sbjct: 509 SDQHSEPSNVNRSDI---PSVSCDADKSCLRSPQESQS--RQIRSC--TKVHMQGMAVGR 561

Query: 199 KVDLKHFVTYRDLSSALEKMFSCFTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYED 258
            VDL  F  Y DL   LE+MF       CG+                     ++++ Y D
Sbjct: 562 AVDLTRFDGYEDLLRKLEEMFD-IEGELCGA-------------------TKKWLVVYTD 601

Query: 259 KDGDWMLVGDVPWVMFTDSCKRLRIMKSSEAIGLAPR 295
            + D M+VGD PW+ F    +++ I    E   L+P+
Sbjct: 602 NEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLSPK 638


>Medtr8g100050.1 | auxin response factor 2 | HC |
           chr8:40230869-40235830 | 20130731
          Length = 833

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 22/143 (15%)

Query: 164 KNSMTSQPQKNDGDVEATSGCLY--VKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMFSC 221
           K   TSQP   D  ++  SG      KV   G    R VDL  F  Y +L++ L+++F  
Sbjct: 688 KQLQTSQPHVKDVQLKPQSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLF-- 745

Query: 222 FTISQCGSHGASSHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRL 281
                             E R   +    ++++ + D +GD MLVGD PW  F    +++
Sbjct: 746 ------------------EFRGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKI 787

Query: 282 RIMKSSEAIGLAPRSMEKCKSRN 304
            I    E   ++P ++      N
Sbjct: 788 YIYPKEEIQKMSPGTLSSKNEEN 810


>Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:53308708-53310353 | 20130731
          Length = 173

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 12/111 (10%)

Query: 175 DGDVEATSGCLYVKVSMDGAPYLRKVDLKHFVTYRDLSSALEKMF-SCFTISQCGSHGAS 233
           D D+ ++S    V V ++G    +++ L +  +Y+ L+ AL +MF  C      G H   
Sbjct: 58  DDDLVSSSVVPAVTVVLEGRSICQRISLHNHGSYQSLAKALRQMFVDCTDDCDAGDH--- 114

Query: 234 SHDKLSESRLIDLLHGSEYVLTYEDKDGDWMLVGDVPWVMFTDSCKRLRIM 284
            H  LS +     + G  +V+ YED + D +L GD+ W  F    KR+RI+
Sbjct: 115 -HLDLSNA-----IPG--HVIAYEDMENDLLLAGDLTWKDFVRVAKRIRIL 157