Miyakogusa Predicted Gene

Lj2g3v0813190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0813190.1 Non Characterized Hit- tr|I3S6R4|I3S6R4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.77,0,no
description,Thioredoxin-like fold; THIOREDOXIN_2,Thioredoxin-like
fold; Thioredoxin-like,Thioredo,CUFF.35583.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g087990.1 | type II peroxiredoxin | HC | chr6:33127659-331...   288   2e-78
Medtr7g103610.1 | type II peroxiredoxin | HC | chr7:41930315-419...   181   2e-46
Medtr7g103610.2 | type II peroxiredoxin | HC | chr7:41930375-419...   166   1e-41
Medtr2g022660.1 | type II peroxiredoxin | HC | chr2:7861803-7865...   114   5e-26

>Medtr6g087990.1 | type II peroxiredoxin | HC |
           chr6:33127659-33125423 | 20130731
          Length = 162

 Score =  288 bits (737), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 137/162 (84%), Positives = 152/162 (93%)

Query: 1   MAPINVGASIPDGILAYLDDQNTPQTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFI 60
           MAPI VG  IPDG LA+LD++N PQ+V+IHSL+AGKKVIIF VPGAFTPTCSLKHVPGFI
Sbjct: 1   MAPIKVGDVIPDGTLAFLDEENKPQSVTIHSLSAGKKVIIFAVPGAFTPTCSLKHVPGFI 60

Query: 61  ERAEELKSKGVDELICISVNDPFVMSSWAKTFPENKHVKFLADGSAKYTHDLGLELDLND 120
           ER+EELK KGVDE+ICISVNDPFV++SWAKTFPENKHVKFLADGSAKYTH LGLELDL+D
Sbjct: 61  ERSEELKGKGVDEIICISVNDPFVLNSWAKTFPENKHVKFLADGSAKYTHALGLELDLSD 120

Query: 121 KGLGTRSRRFALLVEDLKVKVANVEDGGEFTVSSAEEIIKAL 162
           KGLG RS+RFALLVEDLKVKVANVE+GGE+T+S AEEIIKAL
Sbjct: 121 KGLGIRSKRFALLVEDLKVKVANVEEGGEYTISGAEEIIKAL 162


>Medtr7g103610.1 | type II peroxiredoxin | HC |
           chr7:41930315-41928967 | 20130731
          Length = 217

 Score =  181 bits (459), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/163 (52%), Positives = 116/163 (71%), Gaps = 2/163 (1%)

Query: 2   APINVGASIPDGILAYLDDQNTPQTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFIE 61
           A I+VG  +P+   +YLD     QT+++  L  GKK ++F VPGAFTPTCS KHVPGF+E
Sbjct: 55  ATISVGDKLPESTFSYLDPAGEVQTITVSDLTKGKKAVLFAVPGAFTPTCSQKHVPGFVE 114

Query: 62  RAEELKSKGVDELICISVNDPFVMSSWAKTFPENKHVKFLADGSAKYTHDLGLELDLNDK 121
           ++ ELK+KG+D + CISVND FVM +W +    N  V  L+DG+  +T  +G+ELDL+DK
Sbjct: 115 KSAELKAKGIDTIACISVNDAFVMKAWKEDLKVNDEVVLLSDGNGDFTKAIGVELDLSDK 174

Query: 122 --GLGTRSRRFALLVEDLKVKVANVEDGGEFTVSSAEEIIKAL 162
             GLG RSRR+ALL ED  VK+ N+E+GG FT S A++I+K L
Sbjct: 175 PVGLGVRSRRYALLAEDGVVKLFNLEEGGAFTFSGADDILKVL 217


>Medtr7g103610.2 | type II peroxiredoxin | HC |
           chr7:41930375-41928539 | 20130731
          Length = 237

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 78/148 (52%), Positives = 105/148 (70%), Gaps = 2/148 (1%)

Query: 2   APINVGASIPDGILAYLDDQNTPQTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFIE 61
           A I+VG  +P+   +YLD     QT+++  L  GKK ++F VPGAFTPTCS KHVPGF+E
Sbjct: 55  ATISVGDKLPESTFSYLDPAGEVQTITVSDLTKGKKAVLFAVPGAFTPTCSQKHVPGFVE 114

Query: 62  RAEELKSKGVDELICISVNDPFVMSSWAKTFPENKHVKFLADGSAKYTHDLGLELDLNDK 121
           ++ ELK+KG+D + CISVND FVM +W +    N  V  L+DG+  +T  +G+ELDL+DK
Sbjct: 115 KSAELKAKGIDTIACISVNDAFVMKAWKEDLKVNDEVVLLSDGNGDFTKAIGVELDLSDK 174

Query: 122 --GLGTRSRRFALLVEDLKVKVANVEDG 147
             GLG RSRR+ALL ED  VK+ N+E+G
Sbjct: 175 PVGLGVRSRRYALLAEDGVVKLFNLEEG 202


>Medtr2g022660.1 | type II peroxiredoxin | HC | chr2:7861803-7865523
           | 20130731
          Length = 199

 Score =  114 bits (284), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 83/136 (61%), Gaps = 1/136 (0%)

Query: 25  QTVSIHSLAAGKKVIIFGVPGAFTPTCSLKHVPGFIERAEELKSKGVDELICISVNDPFV 84
            T  I+ +   KKV+IFG+PGA+T  CS KHVP + +  E+ K+KGVD +IC+SVNDP+ 
Sbjct: 61  STTPINDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKDNIEKFKAKGVDSVICVSVNDPYT 120

Query: 85  MSSWAKTFPENKHVKFLADGSAKYTHDLGLELDLNDKGLGTRSRRFALLVEDLKVKVANV 144
           +++WA+       ++F  D    +   L L  DL+   LGTRS R++  V D KVK  NV
Sbjct: 121 VNAWAEKLQAKDAIEFYGDFDGSFHKSLELTTDLSGALLGTRSERWSAYVVDGKVKALNV 180

Query: 145 EDG-GEFTVSSAEEII 159
           E+   +  VS AE I+
Sbjct: 181 EEAPSDVKVSGAETIL 196