Miyakogusa Predicted Gene

Lj2g3v0781630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0781630.1 Non Characterized Hit- tr|J3MPU6|J3MPU6_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB08G1,51.65,3e-18,seg,NULL,CUFF.35449.1
         (466 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088460.1 | hypothetical protein | HC | chr6:32844107-3283...   681   0.0  

>Medtr6g088460.1 | hypothetical protein | HC |
           chr6:32844107-32839664 | 20130731
          Length = 488

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/428 (76%), Positives = 372/428 (86%), Gaps = 6/428 (1%)

Query: 33  RAFPSLNRTLLAGFPTAPVSKSILRFRASSSASTQEENGSPEQFLQNNSIADFMRFKRGV 92
           +AFPS     L GFP  P S S L+ +   ++S Q+ENGSPEQFLQ+NSIADFMRFK+G+
Sbjct: 28  KAFPSF----LVGFPKPPFSNSTLKIKTCFASSIQQENGSPEQFLQSNSIADFMRFKKGI 83

Query: 93  RGGGSGDLQTALVSYRKKFPWSILQPFLQVDLVSTIHIADEEYFLALQKELESYDCVLYE 152
             G +G LQTA+V Y+KKFPWS+L+P LQVDL+STIHIADEEYFLALQKELESYDCVLYE
Sbjct: 84  -DGSTGLLQTAVVKYKKKFPWSLLKPNLQVDLISTIHIADEEYFLALQKELESYDCVLYE 142

Query: 153 MVASRESLENKRNFTVTTRLKGSRSKGFNILGCIQRQMARILTLDFQLDCLNYQSPNWYH 212
           MVAS+++LE  RN     RLK S+++GFNI+GCIQRQMA+IL LDFQLDCLNYQS NW H
Sbjct: 143 MVASKKTLEKMRNPKAKKRLKRSQTRGFNIIGCIQRQMAQILKLDFQLDCLNYQSENWQH 202

Query: 213 ADLDYETFKLLQLEKGESLFSFAKEMTLKSTKAILQSASIPEDLDPWRSKLLWASRVLPM 272
           ADLDYETF+LLQ  KGESLFSFAK+ TL+STKA+LQ  SIPEDLDPWRSKLLWASRVLPM
Sbjct: 203 ADLDYETFQLLQEAKGESLFSFAKDTTLRSTKAMLQ-PSIPEDLDPWRSKLLWASRVLPM 261

Query: 273 PLVGLLIIGGVCADVGTQASEYPEIEALSRLDFSAAMKVFLAKRLTSEFTQITADVEEKS 332
           PLVGL +IG VCA+VG+ ASEYPEIEALSRLD SAAMK+FLAK LTS+ TQ TADVEEKS
Sbjct: 262 PLVGLFLIGSVCANVGSPASEYPEIEALSRLDVSAAMKLFLAKSLTSDLTQNTADVEEKS 321

Query: 333 VIIGERNRVALETLRRAMDEGHNRIAILYGGGHMPDLGRRLREEFDLVPSSVRWVTAWSI 392
           VIIGERNRVA+E LRRAMD+G N+IAILYGGGHMPDLGRRLREEFDLVP  V WVTAWSI
Sbjct: 322 VIIGERNRVAIENLRRAMDKGQNKIAILYGGGHMPDLGRRLREEFDLVPYGVEWVTAWSI 381

Query: 393 RKRDLNTNSFPFLKTMAKASGWPLNRYQTLALLIFSSVLALDLWFWELFFGTAVNWVSEV 452
           RKR L+T+S PFLKTMA+ASGWPLNRYQTLALLIFSS+LA+DLWFWELFFGT V WVS+V
Sbjct: 382 RKRKLDTSSLPFLKTMARASGWPLNRYQTLALLIFSSILAVDLWFWELFFGTMVTWVSDV 441

Query: 453 GSEFLQYV 460
            +E L+YV
Sbjct: 442 TTEILRYV 449