Miyakogusa Predicted Gene
- Lj2g3v0777050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0777050.1 tr|G7KNH7|G7KNH7_MEDTR DNA mismatch repair
protein Msh6-2 OS=Medicago truncatula GN=MTR_6g086270 PE=,85.87,0,MUTS
HOMOLOG 6, MSH6,DNA mismatch repair protein MutS-homologue MSH6; DNA
MISMATCH REPAIR MUTS RELAT,CUFF.35408.1
(663 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC | chr6:3... 1123 0.0
Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC | c... 256 6e-68
Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC | c... 186 6e-47
Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC | c... 156 7e-38
Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC | c... 156 7e-38
Medtr5g093110.1 | DNA mismatch repair protein MutS | HC | chr5:4... 100 5e-21
Medtr1g045670.1 | DNA mismatch repair protein | HC | chr1:171673... 92 1e-18
Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |... 78 2e-14
Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC | chr4:... 76 1e-13
>Medtr6g086270.1 | DNA mismatch repair protein msh6 | HC |
chr6:32387897-32378956 | 20130731
Length = 1155
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/664 (82%), Positives = 586/664 (88%), Gaps = 1/664 (0%)
Query: 1 MQVSPKEVIYESRGLSKEAQKALRKFSGNGSTTL-LTPVQSINDLVNTEINDLILSKGYF 59
MQVSPKE+IYE RG+SKEA+KA RKFS NGSTTL LTP++SI DLV +EI+DLI SKGYF
Sbjct: 492 MQVSPKEIIYERRGVSKEAEKAFRKFSLNGSTTLQLTPMRSITDLVTSEISDLIHSKGYF 551
Query: 60 KGSSDPLDHVMSKVIHREITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYKACLKMDGP 119
KGSS+ LDHV++ VIH EITLSALGGLIGHL+RLMLD++LQNGD+YPYQVYK CLKMDGP
Sbjct: 552 KGSSNSLDHVLTNVIHCEITLSALGGLIGHLNRLMLDEVLQNGDIYPYQVYKGCLKMDGP 611
Query: 120 TLINLEIFSNSDDGGKSGTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINNRLDVVDNL 179
T INLEIF NS+DGGK+GTLYKYLDNCVTS GKRLLRNWICCPLKD EGINNRLDVVD+L
Sbjct: 612 TYINLEIFGNSNDGGKAGTLYKYLDNCVTSSGKRLLRNWICCPLKDAEGINNRLDVVDHL 671
Query: 180 IACPEIVSHIAQHLRKLPDLELLLGRIKSTXXXXXXXXXXXXXXXXXXXRVKVFGSLVKG 239
IA P IVSHIAQHLRKLPDLELLLGR KS+ RVKVFGSLVKG
Sbjct: 672 IASPVIVSHIAQHLRKLPDLELLLGRTKSSLKVSSPILLPLLVKKILKQRVKVFGSLVKG 731
Query: 240 LRTAXXXXXXXQKEQPLISSLNKVFKLPILTGINGLDKFLTQFEAAVDSDFPNYLNHNVT 299
LRT QKEQPLISSL KVFKLP+LTG +GLD+FLTQFEAAVDSDFPNY NH+VT
Sbjct: 732 LRTTLSLLLILQKEQPLISSLTKVFKLPVLTGSDGLDQFLTQFEAAVDSDFPNYQNHDVT 791
Query: 300 DSDAXXXXXXXXXXXXKAAQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECT 359
D+DA KA QWFEVV+AINCIDVLRSFA+ SSFSCGTMSRPVIVP S+ T
Sbjct: 792 DTDAETLTILAELFLEKANQWFEVVHAINCIDVLRSFAVTSSFSCGTMSRPVIVPTSKST 851
Query: 360 SKDSGGPVLKMKGLWHPFALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLL 419
SKDSG PVLKMKGLWHPFALGE+G PVPND+ILGENE HP TLLLTGPNMGGKSTLL
Sbjct: 852 SKDSGAPVLKMKGLWHPFALGETGREPVPNDMILGENEGGHHPRTLLLTGPNMGGKSTLL 911
Query: 420 RATCLAVIMAQLGCYVPCENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNA 479
RATCLAVIMAQLGCYVPCENCV+SVVDIIFTRLGATDRIMAGESTFFIECTETASVL NA
Sbjct: 912 RATCLAVIMAQLGCYVPCENCVLSVVDIIFTRLGATDRIMAGESTFFIECTETASVLHNA 971
Query: 480 TQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTM 539
TQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTM
Sbjct: 972 TQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTM 1031
Query: 540 QHMACAFKSKSDTLSKRDQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASKASQQ 599
QHMACAFKSKSDTLSK+DQELVFLYRLA GACPESYGLQVALMAGIPEKTVN+ASKASQQ
Sbjct: 1032 QHMACAFKSKSDTLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEKTVNVASKASQQ 1091
Query: 600 MKKSIGRTFRSSELRSEFSTLHEEWLKTLMSISRMEDGKSFDEDVLDTLICLWYELKTSF 659
MK SIG+ FRSSE RSEFS+LHEEWLKTLMSI+R+ED +SFD+DVLDTL+CL YELK+SF
Sbjct: 1092 MKISIGKNFRSSEQRSEFSSLHEEWLKTLMSIARIEDVESFDDDVLDTLVCLRYELKSSF 1151
Query: 660 RSGN 663
+SGN
Sbjct: 1152 KSGN 1155
>Medtr7g109470.1 | DNA mismatch repair MSH3-like protein | HC |
chr7:44767037-44759016 | 20130731
Length = 1280
Score = 256 bits (653), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 199/315 (63%), Gaps = 23/315 (7%)
Query: 319 QWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPVLKMKGLWHPF- 377
QW ++V+A +DVL + A+AS + G RP V + CT++ P + K L HP
Sbjct: 947 QWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVG-TLCTNE---APYIYAKSLGHPVL 1002
Query: 378 ---ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCY 434
LG+S VPNDI +G + +LLTGPNMGGKSTLLR CLAVI+AQ+G
Sbjct: 1003 RSDTLGKSAF--VPNDITIGGPD---QASFILLTGPNMGGKSTLLRQVCLAVILAQVGAD 1057
Query: 435 VPCENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGT 494
VP E+ +S VD IF R+GA D IMAG+STF E +ETA++L +AT++SLV LDELGRGT
Sbjct: 1058 VPSESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVALDELGRGT 1117
Query: 495 STFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLS 554
ST DG AIA +V HL+ V CR LF+THYH L ++ P+V + HMAC S ++ L
Sbjct: 1118 STSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNEGL- 1176
Query: 555 KRDQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGRTFRSSELR 614
E+ FLYRL++GACP+SYG+ VA +AG+P + A S++ + + G+ R
Sbjct: 1177 ---DEVTFLYRLSAGACPKSYGVNVARLAGLPTSVLQKADAKSREFEATYGK------YR 1227
Query: 615 SEFSTLHEEWLKTLM 629
+E ++ ++ W+ ++
Sbjct: 1228 TEPNSSNQSWVDEII 1242
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 2 QVSPKEVIYESRGLSKEAQKALRKFSGNGSTTLLTPVQSINDLVNT---------EINDL 52
++ P E++ ++ LS E ++AL K + N L P D T ND+
Sbjct: 515 EIRPVEIVKPAKLLSAETERALLKHTRNPLVNELIPNVEFWDADKTLDHLKRIYGHNNDV 574
Query: 53 ILSKGYFKGSSDPLDHVMSKVIHREITLSALGGLIGHLDRLMLDDIL---QNGDLYPYQV 109
G D L ++ LSALGG + +L + LD+ L +L P V
Sbjct: 575 SAQDGGLDCLPDVLVELVKTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPCSV 634
Query: 110 Y-----KACLKMDGPTLINLEIFSNSDDGGKSGTLYKYLDNCVTSPGKRLLRNWICCPLK 164
+ K + +D L NLEIF NS +G SGTLY L+ CVT+ GKRLL++W+ PL
Sbjct: 635 FSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLY 694
Query: 165 DGEGINNRLDVVDNL--IACPEIVSHIAQHLRKLPDLELLLGRIKST 209
E I R + V L + P + + L KLPD+E LL R+ S+
Sbjct: 695 HVESIKERQEAVAGLKGVNLPHTL-EFRKALSKLPDMERLLARVLSS 740
>Medtr4g111945.1 | DNA mismatch repair MSH3-like protein | HC |
chr4:46289309-46300169 | 20130731
Length = 941
Score = 186 bits (472), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 160/278 (57%), Gaps = 16/278 (5%)
Query: 327 INCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPVLKMKGLWHPFALGESGCLP 386
I+ +DVL SFA +S SC P R + TS D G +L+ G HP +
Sbjct: 597 ISELDVLLSFADLAS-SC-----PTPYTRPDITSSDEGDIILE--GSRHPCVEAQDWVNF 648
Query: 387 VPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVD 446
+PND L R ++TGPNMGGKST +R + ++MAQ+GC+VPC+ ISV D
Sbjct: 649 IPNDCKLI----RGKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRD 704
Query: 447 IIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAV 506
IF R+GA D + G STF E ET+S+L+ AT SL+I+DELGRGTST+DG+ +A+A+
Sbjct: 705 CIFARVGAGDCQLRGVSTFMQEMLETSSILKGATDKSLIIIDELGRGTSTYDGFGLAWAI 764
Query: 507 FRHLIEKVNCRLLFATHYHPLT---KEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFL 563
H+++ + LFATH+H LT E S+ Q + A S + ++L L
Sbjct: 765 CEHIVDVIKAPTLFATHFHELTALADENGSND-THKQIVGVANYHVSAHIDASTRKLTML 823
Query: 564 YRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMK 601
Y++ GAC +S+G+ VA A PE V +A + + +++
Sbjct: 824 YKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELE 861
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 24/243 (9%)
Query: 51 DLILSKGYF-KGSSDPLDHVMSKVIHREITLSALGGLIGHLDRLMLDDILQNGDLYPYQV 109
DL+ G KGS + + ++S E ALG L+ + + L + +N L Y +
Sbjct: 235 DLVQDLGRLVKGSIEAVQDLVSGF---EFAPGALGALLSYAELLADESNYENYTLRRYNL 291
Query: 110 YKACLKMDGPTLINLEIFSNSDDGGKSGTLYKYLD-NCVTSPGKRLLRNWICCPLKDGEG 168
+ +++D + L I + D K+ +L+ ++ C GKRLL W+ PL D
Sbjct: 292 -DSYMRLDSAAMRALNILESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVND 350
Query: 169 INNRLDVVDNLIACPEIVSHIAQHLRKLPDLELLLGRIKSTXXXXXXXXXXXXXXXXXXX 228
IN+RLDVV + + + QHL+++ D+E L+ ++
Sbjct: 351 INSRLDVVQAFVEDTVLRQDLRQHLKRISDIERLVHNLQKGKAGLQHV------------ 398
Query: 229 RVKVFGSLVKGLRTAXXXXXXXQKEQPLISSLNKVF--KLPILTGINGLDKFLTQFEAAV 286
VK++ S +R + + S + + L +LTG + L+KF+ E V
Sbjct: 399 -VKLYQS---SIRLPYIKSALDRYDGQFSSMMKSRYLKDLELLTGADRLNKFIELVEICV 454
Query: 287 DSD 289
D D
Sbjct: 455 DLD 457
>Medtr1g100683.2 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623820-45633367 | 20130731
Length = 1072
Score = 156 bits (394), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 177/335 (52%), Gaps = 31/335 (9%)
Query: 318 AQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPV-LKMKGLWHP 376
A++ V A+ +D L S A+ S + G + RPV V D PV +++ HP
Sbjct: 724 AEFQASVQALASLDCLHSLAILSR-NKGYV-RPVFV--------DDHEPVQMQICSGRHP 773
Query: 377 FALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 436
VPND + + DR + C ++ TGPNMGGKS +R L +MAQ+G +VP
Sbjct: 774 VLESILQNNFVPNDTSM--HADREY-CQIV-TGPNMGGKSCYVRQASLIALMAQVGSFVP 829
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
+ + V+D I+TR+GA+D I G STF E +ET+ +L T SLVILDELGRGTST
Sbjct: 830 ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTST 889
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHP-RVTMQHMACAFKSKSDTLSK 555
DG AIAYA +L+++ +LF THY + P V HM + + D +SK
Sbjct: 890 HDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGSVAAYHM--SHLTSHDDVSK 947
Query: 556 RD---QELVFLYRLASGACPESYGLQVALMAGIP----EKTVNIASKASQQMKKSI-GRT 607
+++ +LY+L G S+G +VA +A +P + + +ASK + I GR+
Sbjct: 948 NSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRS 1007
Query: 608 FRSSELRSEFSTLHEEWLKTLMSISRMEDGKSFDE 642
+ EL E +H+E + L E G+++ E
Sbjct: 1008 GK--ELLDE-PVIHQE--QELHHCPHQEFGRAYKE 1037
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 77 EITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYKACLKMDGPTLINLEIFSNSDDGGKS 136
E+ + AL I HL + IL +G L P+ V + + TL LE+ N+ DG S
Sbjct: 373 ELAVEALALTIRHLKGFGFERILCSGALRPF-VSNTEMTLSANTLQQLEVLQNNSDGSAS 431
Query: 137 GTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINNRLDVVDNL 179
G+L + +++ +T G RLL++W+ PL D I RL+ V +
Sbjct: 432 GSLLQVMNHTLTIFGSRLLKHWVSHPLCDQTLIAARLNAVSEI 474
>Medtr1g100683.1 | DNA mismatch repair MSH3-like protein | HC |
chr1:45623796-45633355 | 20130731
Length = 1072
Score = 156 bits (394), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 177/335 (52%), Gaps = 31/335 (9%)
Query: 318 AQWFEVVNAINCIDVLRSFAMASSFSCGTMSRPVIVPRSECTSKDSGGPV-LKMKGLWHP 376
A++ V A+ +D L S A+ S + G + RPV V D PV +++ HP
Sbjct: 724 AEFQASVQALASLDCLHSLAILSR-NKGYV-RPVFV--------DDHEPVQMQICSGRHP 773
Query: 377 FALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVP 436
VPND + + DR + C ++ TGPNMGGKS +R L +MAQ+G +VP
Sbjct: 774 VLESILQNNFVPNDTSM--HADREY-CQIV-TGPNMGGKSCYVRQASLIALMAQVGSFVP 829
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
+ + V+D I+TR+GA+D I G STF E +ET+ +L T SLVILDELGRGTST
Sbjct: 830 ASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSHILHRCTGRSLVILDELGRGTST 889
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHP-RVTMQHMACAFKSKSDTLSK 555
DG AIAYA +L+++ +LF THY + P V HM + + D +SK
Sbjct: 890 HDGMAIAYATLHYLLKQKKSLVLFVTHYPKIASLETEFPGSVAAYHM--SHLTSHDDVSK 947
Query: 556 RD---QELVFLYRLASGACPESYGLQVALMAGIP----EKTVNIASKASQQMKKSI-GRT 607
+++ +LY+L G S+G +VA +A +P + + +ASK + I GR+
Sbjct: 948 NSNDHEDITYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRS 1007
Query: 608 FRSSELRSEFSTLHEEWLKTLMSISRMEDGKSFDE 642
+ EL E +H+E + L E G+++ E
Sbjct: 1008 GK--ELLDE-PVIHQE--QELHHCPHQEFGRAYKE 1037
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 77 EITLSALGGLIGHLDRLMLDDILQNGDLYPYQVYKACLKMDGPTLINLEIFSNSDDGGKS 136
E+ + AL I HL + IL +G L P+ V + + TL LE+ N+ DG S
Sbjct: 373 ELAVEALALTIRHLKGFGFERILCSGALRPF-VSNTEMTLSANTLQQLEVLQNNSDGSAS 431
Query: 137 GTLYKYLDNCVTSPGKRLLRNWICCPLKDGEGINNRLDVVDNL 179
G+L + +++ +T G RLL++W+ PL D I RL+ V +
Sbjct: 432 GSLLQVMNHTLTIFGSRLLKHWVSHPLCDQTLIAARLNAVSEI 474
>Medtr5g093110.1 | DNA mismatch repair protein MutS | HC |
chr5:40657110-40644297 | 20130731
Length = 810
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 11/194 (5%)
Query: 406 LLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVDIIFTRLGATDRIMAGE-ST 464
++TGPN GKS ++ + V +A +G +VP + + + D IF G+ R+M E ST
Sbjct: 568 IITGPNFSGKSIYIKQVAIIVFLAHIGSFVPADAATVGLTDRIFCATGS--RLMTAEQST 625
Query: 465 FFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNC----RLLF 520
F I+ + +L++AT SL ++DE G+GT T DG + H I C ++
Sbjct: 626 FMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGIGLLAGAINHFI---TCDEPPKVFV 682
Query: 521 ATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFLYRLASGACPESYGLQVA 580
TH L + ++ + D S +++VFLYRL G SYGL A
Sbjct: 683 CTHLMDLLHGCSLTKSEQIKFYTMSILRPEDD-STHIEDIVFLYRLVPGHVHHSYGLHCA 741
Query: 581 LMAGIPEKTVNIAS 594
L+AG+P++ + A+
Sbjct: 742 LLAGVPDEIIKRAA 755
>Medtr1g045670.1 | DNA mismatch repair protein | HC |
chr1:17167339-17152759 | 20130731
Length = 1138
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 10/189 (5%)
Query: 405 LLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENCVISVVDIIFTRLGATDRIMAGEST 464
LLTGPN GGKS+LLR+ C A ++ G VP E+ VI D I + + D +S+
Sbjct: 765 FLLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSPADHKSS 824
Query: 465 FFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHY 524
F +E +E S++ T+ SLV++DE+ RGT T G IA ++ L ++ C + +TH
Sbjct: 825 FQVEMSELRSIIAGTTKRSLVLVDEICRGTETAKGTCIAGSIIETL-DRSGCLGIVSTHL 883
Query: 525 HPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFLYRLASGACPESYGLQVALMAG 584
H + T+ K+ + D + + L G C ES + A G
Sbjct: 884 HDI---------FTLPLNITNTVHKAMGTTCIDGQTKPTWMLTDGVCKESLAFETAKREG 934
Query: 585 IPEKTVNIA 593
IPE + A
Sbjct: 935 IPEIIIQRA 943
>Medtr5g068600.6 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.5 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.2 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066879 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.1 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29066750 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.4 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.3 | DNA mismatch repair MUTS family protein | HC |
chr5:29054350-29067003 | 20130731
Length = 799
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 409 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 463
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 464 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 523
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 524 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 572
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 573 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 611
>Medtr5g068600.7 | DNA mismatch repair MUTS family protein | HC |
chr5:29049681-29066879 | 20130731
Length = 699
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 106/219 (48%), Gaps = 17/219 (7%)
Query: 378 ALGESGCLPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYV-P 436
AL ++ PVP D ++ N+ R +++TGPN GGK+ L+ LA +MA+ G YV
Sbjct: 309 ALDKAQPQPVPVDFLVS-NKTR----VIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLA 363
Query: 437 CENCVISVVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTST 496
E+ I D +F +G + STF + +++ +T+ SLV+LDE+G GT+
Sbjct: 364 SESVQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKLQSTRQSLVLLDEVGAGTNP 423
Query: 497 FDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKR 556
+G A+ ++ L C L AT +H K T+++ AF++ +
Sbjct: 424 LEGAALGMSLLESLAHG-GCLLTIATTHHGELK--------TLKYSNEAFENA--CMEFD 472
Query: 557 DQELVFLYRLASGACPESYGLQVALMAGIPEKTVNIASK 595
+ L Y++ G S + +A G+P ++ A K
Sbjct: 473 EVNLKPTYKVLWGIPGRSNAINIAERLGLPSVVIDAARK 511
>Medtr4g088920.1 | DNA mismatch repair protein MutS2 | HC |
chr4:35517782-35512675 | 20130731
Length = 913
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 385 LPVPNDIILGENEDRRHPCTLLLTGPNMGGKSTLLRATCLAVIMAQLGCYVPCENC-VIS 443
PVP D + R ++++GPN GGK+ ++ LA +M++ G ++P + +
Sbjct: 412 FPVPVDFKI-----RSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLP 466
Query: 444 VVDIIFTRLGATDRIMAGESTFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIA 503
D+I +G + STF + L+ A++ SLV++DE+G GT +G A++
Sbjct: 467 WFDLILVDIGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALS 526
Query: 504 YAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSDTLSKRDQELVFL 563
++ ++L E VN ++ THY L+ TM+ F++ + S + L
Sbjct: 527 ASILQYLREHVNLAVV-TTHYADLS---------TMKEKDTCFENAAMEFSL--ETLQPT 574
Query: 564 YRLASGACPESYGLQVALMAGIPEKTVNIASKASQQMK 601
YR+ G +S L +A G + ++ A K +++K
Sbjct: 575 YRVLWGCTGDSNALSIAQSIGFDKNIIDHAQKWVEKLK 612