Miyakogusa Predicted Gene

Lj2g3v0766390.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0766390.1 Non Characterized Hit- tr|I1L4F4|I1L4F4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16539 PE,89.06,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Fe-S cluster
assembly (FSCA) domain-like,,CUFF.35361.1
         (534 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g086600.1 | nucleotide-binding protein | HC | chr6:3217233...   949   0.0  
Medtr6g086600.2 | nucleotide-binding protein | HC | chr6:3217211...   926   0.0  
Medtr1g070360.1 | iron-sulfur nubpl-like protein | HC | chr1:311...   188   1e-47
Medtr1g019620.1 | cytosolic Fe-S cluster assembly factor NUBP1-l...   115   1e-25
Medtr1g019620.3 | cytosolic Fe-S cluster assembly factor NUBP1-l...   115   1e-25
Medtr1g019620.2 | cytosolic Fe-S cluster assembly factor NUBP1-l...   115   1e-25
Medtr1g016110.1 | cytosolic Fe-S cluster assembly factor NUBP1-l...   115   2e-25
Medtr1g016110.2 | cytosolic Fe-S cluster assembly factor NUBP1-l...   114   3e-25
Medtr1g095875.1 | hypothetical protein | HC | chr1:43168541-4316...    60   5e-09

>Medtr6g086600.1 | nucleotide-binding protein | HC |
           chr6:32172332-32166446 | 20130731
          Length = 526

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/533 (88%), Positives = 490/533 (91%), Gaps = 11/533 (2%)

Query: 1   MQVVHAPSSPHLSIPTSKPPQLTWGLL--PSVNVKSSPLFAIHSSLQSQRDPCSLWTPTQ 58
           MQ V A SSPH SI +SKPP  +   L   SVNVK S          S R+  SLWT   
Sbjct: 1   MQAVQASSSPHFSIHSSKPPHSSTCSLVTSSVNVKCSGF--------SLREQSSLWTSYN 52

Query: 59  KRATL-SSGAARAASVEVGNSSISTGTAEEDVLKALSQIIDPDFGTDIVTCGFVKDLVTD 117
           KR  L SS +A+AASVEVG+SSISTGTAE+DVLKALSQIIDPDFGTDIVTCGFVKDL  D
Sbjct: 53  KRVILKSSFSAKAASVEVGSSSISTGTAEDDVLKALSQIIDPDFGTDIVTCGFVKDLQID 112

Query: 118 KNLGEVSFRLELTTPACPIKDMFEKQANEVVAMLPWVKNVKVTMSAQPARPLYAEQLPAG 177
           K LGEVSFRLELTTPACPIKD+FEKQANEVVA+LPWVKNV VTMSAQPA+PL+AEQLPAG
Sbjct: 113 KALGEVSFRLELTTPACPIKDVFEKQANEVVAVLPWVKNVNVTMSAQPAKPLFAEQLPAG 172

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESRIL 237
           LQTISNIIAVSSCKGGVGKST+AVNLAYTLADMGARVGIFDAD+YGPSLPTMVSPE+RIL
Sbjct: 173 LQTISNIIAVSSCKGGVGKSTVAVNLAYTLADMGARVGIFDADIYGPSLPTMVSPENRIL 232

Query: 238 EMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDM 297
           EMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGV NQLLTTTEWGELDYLVIDM
Sbjct: 233 EMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGVTNQLLTTTEWGELDYLVIDM 292

Query: 298 PPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDA 357
           PPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDA
Sbjct: 293 PPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENMCHFDA 352

Query: 358 DGKRYYPFGRGSGSEVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSKIFQNL 417
           DGKRYYPFGRGSGS+VVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSKIFQNL
Sbjct: 353 DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVADPQGEVSKIFQNL 412

Query: 418 GVCVVQQCAKIRQQVSTAVTYDKSFKAIKVKVPDSDEQFFLHPATVRRNDRSAQSVDEWT 477
           GVCVVQQCAKIRQQVSTAVTYDKS KAI+VKVPDSDE+FFLHPATVRRNDRSAQSVDEWT
Sbjct: 413 GVCVVQQCAKIRQQVSTAVTYDKSVKAIRVKVPDSDEEFFLHPATVRRNDRSAQSVDEWT 472

Query: 478 GEQKLQYSDVPNDIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQMMERLVTV 530
           GEQKLQY+D+P+ IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQ MERLV V
Sbjct: 473 GEQKLQYTDIPDYIEPEEIRPMGNYAVSITWPDGFSQIAPYDQLQTMERLVGV 525


>Medtr6g086600.2 | nucleotide-binding protein | HC |
           chr6:32172118-32166485 | 20130731
          Length = 517

 Score =  926 bits (2394), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/503 (90%), Positives = 473/503 (94%), Gaps = 9/503 (1%)

Query: 29  SVNVKSSPLFAIHSSLQSQRDPCSLWTPTQKRATL-SSGAARAASVEVGNSSISTGTAEE 87
           SVNVK S          S R+  SLWT   KR  L SS +A+AASVEVG+SSISTGTAE+
Sbjct: 22  SVNVKCSGF--------SLREQSSLWTSYNKRVILKSSFSAKAASVEVGSSSISTGTAED 73

Query: 88  DVLKALSQIIDPDFGTDIVTCGFVKDLVTDKNLGEVSFRLELTTPACPIKDMFEKQANEV 147
           DVLKALSQIIDPDFGTDIVTCGFVKDL  DK LGEVSFRLELTTPACPIKD+FEKQANEV
Sbjct: 74  DVLKALSQIIDPDFGTDIVTCGFVKDLQIDKALGEVSFRLELTTPACPIKDVFEKQANEV 133

Query: 148 VAMLPWVKNVKVTMSAQPARPLYAEQLPAGLQTISNIIAVSSCKGGVGKSTIAVNLAYTL 207
           VA+LPWVKNV VTMSAQPA+PL+AEQLPAGLQTISNIIAVSSCKGGVGKST+AVNLAYTL
Sbjct: 134 VAVLPWVKNVNVTMSAQPAKPLFAEQLPAGLQTISNIIAVSSCKGGVGKSTVAVNLAYTL 193

Query: 208 ADMGARVGIFDADVYGPSLPTMVSPESRILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRA 267
           ADMGARVGIFDAD+YGPSLPTMVSPE+RILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRA
Sbjct: 194 ADMGARVGIFDADIYGPSLPTMVSPENRILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRA 253

Query: 268 IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLS 327
           IMRGPMVSGV NQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLS
Sbjct: 254 IMRGPMVSGVTNQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLS 313

Query: 328 FIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSEVVQQFGIPHLFDLPI 387
           FIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGS+VVQQFGIPHLFDLPI
Sbjct: 314 FIDVAKGVRMFSKLKVPCVAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPI 373

Query: 388 RPTLSASGDSGMPEVVADPQGEVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKSFKAIKV 447
           RPTLSASGDSGMPEVVADPQGEVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKS KAI+V
Sbjct: 374 RPTLSASGDSGMPEVVADPQGEVSKIFQNLGVCVVQQCAKIRQQVSTAVTYDKSVKAIRV 433

Query: 448 KVPDSDEQFFLHPATVRRNDRSAQSVDEWTGEQKLQYSDVPNDIEPEEIRPMGNYAVSIT 507
           KVPDSDE+FFLHPATVRRNDRSAQSVDEWTGEQKLQY+D+P+ IEPEEIRPMGNYAVSIT
Sbjct: 434 KVPDSDEEFFLHPATVRRNDRSAQSVDEWTGEQKLQYTDIPDYIEPEEIRPMGNYAVSIT 493

Query: 508 WPDGFSQIAPYDQLQMMERLVTV 530
           WPDGFSQIAPYDQLQ MERLV V
Sbjct: 494 WPDGFSQIAPYDQLQTMERLVGV 516


>Medtr1g070360.1 | iron-sulfur nubpl-like protein | HC |
           chr1:31116842-31122548 | 20130731
          Length = 279

 Score =  188 bits (478), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 163/260 (62%), Gaps = 9/260 (3%)

Query: 170 YAEQLPAGLQTISNIIAVSSCKGGVGKSTIAVNLAYTLAD-MGARVGIFDADVYGPSLPT 228
           YA+ L   +  + + IA++S KGGVGKST AVNLA  LA     +VG+ DADVYGP++P 
Sbjct: 12  YAKHLR--IDGVKDTIAIASGKGGVGKSTTAVNLAVALASKFQLKVGLLDADVYGPNIPI 69

Query: 229 MVSPESRILEMNPEKKTIIPTEYMGVKLVSFGFAGQGRA--IMRGPMVSGVINQLLTTTE 286
           M++ +++  E+  + K +IP +  G+K +S GF  +  A  + RGPMVS  + ++    +
Sbjct: 70  MMNIDTK-PEVTQDNK-MIPIDSYGIKCMSIGFLVEKNAPIVWRGPMVSKALEKMTRGVD 127

Query: 287 WGELDYLVIDMPPGTGDIQLTLCQIVPLTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCV 346
           WG LD LVIDMPPGTGD+Q+++ Q + L+ A+IV+TPQ ++ +D  +GV+MF+K+ +P +
Sbjct: 128 WGNLDILVIDMPPGTGDVQISMSQNLQLSGALIVSTPQDVALMDARRGVQMFNKVDIPIL 187

Query: 347 AVVENMCHFDAD--GKRYYPFGRGSGSEVVQQFGIPHLFDLPIRPTLSASGDSGMPEVVA 404
            ++ENM  F     G+  Y FG+G       + G+  L ++P+   +  + D G P V+A
Sbjct: 188 GIIENMSCFKCPHCGEPSYIFGKGGAHSTATEMGLNFLGEVPLEVEIREACDQGHPIVLA 247

Query: 405 DPQGEVSKIFQNLGVCVVQQ 424
            P   VS+ + N+   VVQ+
Sbjct: 248 APDSVVSRAYGNIAEKVVQK 267


>Medtr1g019620.1 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 5/180 (2%)

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESR-I 236
           + T+ + I V S KGGVGKST +  LA+ LA    +VG+ D D+ GPS+P M+  E + I
Sbjct: 55  MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEI 114

Query: 237 LEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVI 295
            + N     +     +GV  + F       A++ RGP  +G+I Q L    WGELD+L++
Sbjct: 115 HQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIV 174

Query: 296 DMPPGTGDIQLTLCQIVP---LTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENM 352
           D PPGT D  +++ Q +    +  A+IVTTPQ++S IDV K V    K+ V  + VVENM
Sbjct: 175 DAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENM 234


>Medtr1g019620.3 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 5/180 (2%)

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESR-I 236
           + T+ + I V S KGGVGKST +  LA+ LA    +VG+ D D+ GPS+P M+  E + I
Sbjct: 55  MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEI 114

Query: 237 LEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVI 295
            + N     +     +GV  + F       A++ RGP  +G+I Q L    WGELD+L++
Sbjct: 115 HQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIV 174

Query: 296 DMPPGTGDIQLTLCQIVP---LTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENM 352
           D PPGT D  +++ Q +    +  A+IVTTPQ++S IDV K V    K+ V  + VVENM
Sbjct: 175 DAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENM 234


>Medtr1g019620.2 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:5941945-5938193 | 20130731
          Length = 355

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 5/180 (2%)

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESR-I 236
           + T+ + I V S KGGVGKST +  LA+ LA    +VG+ D D+ GPS+P M+  E + I
Sbjct: 55  MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEI 114

Query: 237 LEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVI 295
            + N     +     +GV  + F       A++ RGP  +G+I Q L    WGELD+L++
Sbjct: 115 HQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIV 174

Query: 296 DMPPGTGDIQLTLCQIVP---LTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENM 352
           D PPGT D  +++ Q +    +  A+IVTTPQ++S IDV K V    K+ V  + VVENM
Sbjct: 175 DAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENM 234


>Medtr1g016110.1 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:4214827-4219541 | 20130731
          Length = 355

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 5/180 (2%)

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESR-I 236
           + T+ + I V S KGGVGKST +  LA+ LA    +VG+ D D+ GPS+P M+  E + I
Sbjct: 55  MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEI 114

Query: 237 LEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVI 295
            + N     +     +GV  + F       A++ RGP  +G+I Q L    WGELD+L++
Sbjct: 115 HQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIV 174

Query: 296 DMPPGTGDIQLTLCQIVP---LTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENM 352
           D PPGT D  +++ Q +    +  A+IVTTPQ++S IDV K V    K+ V  + VVENM
Sbjct: 175 DAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENM 234


>Medtr1g016110.2 | cytosolic Fe-S cluster assembly factor NUBP1-like
           protein | HC | chr1:4217380-4219541 | 20130731
          Length = 308

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 5/180 (2%)

Query: 178 LQTISNIIAVSSCKGGVGKSTIAVNLAYTLADMGARVGIFDADVYGPSLPTMVSPESR-I 236
           + T+ + I V S KGGVGKST +  LA+ LA    +VG+ D D+ GPS+P M+  E + I
Sbjct: 8   MATVKHKILVLSGKGGVGKSTFSAQLAFALAARDFQVGLLDIDICGPSIPKMLGLEGQEI 67

Query: 237 LEMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVI 295
            + N     +     +GV  + F       A++ RGP  +G+I Q L    WGELD+L++
Sbjct: 68  HQSNLGWSPVYVESNLGVMSIGFMLPHPDEAVIWRGPRKNGLIKQFLKDVYWGELDFLIV 127

Query: 296 DMPPGTGDIQLTLCQIVP---LTAAVIVTTPQKLSFIDVAKGVRMFSKLKVPCVAVVENM 352
           D PPGT D  +++ Q +    +  A+IVTTPQ++S IDV K V    K+ V  + VVENM
Sbjct: 128 DAPPGTSDEHISIVQCLDAANVDGAIIVTTPQQVSLIDVKKEVNFCKKVGVKVLGVVENM 187


>Medtr1g095875.1 | hypothetical protein | HC |
          chr1:43168541-43167143 | 20130731
          Length = 67

 Score = 60.1 bits (144), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/51 (68%), Positives = 37/51 (72%), Gaps = 2/51 (3%)

Query: 25 GLLPSV-NVKSSPLFAIHSSLQSQRDPCSLWTPTQKRATL-SSGAARAASV 73
          GLL S  NVKSSPLFAIH SL SQR+  SLWT   KR  L SS +ARAASV
Sbjct: 14 GLLTSFENVKSSPLFAIHFSLHSQREQSSLWTSHNKRVILKSSCSARAASV 64