Miyakogusa Predicted Gene

Lj2g3v0744270.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0744270.2 Non Characterized Hit- tr|I1KIU7|I1KIU7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21822
PE,90.59,0,coiled-coil,NULL; CASP,NULL; CCAAT DISPLACEMENT
PROTEIN-RELATED,NULL; CASP_C,CASP, C-terminal; seg,N,CUFF.35352.2
         (687 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g103950.1 | CASP carboxy-terminal protein | HC | chr8:4376...  1107   0.0  
Medtr8g103950.2 | CASP carboxy-terminal protein | HC | chr8:4376...   892   0.0  

>Medtr8g103950.1 | CASP carboxy-terminal protein | HC |
           chr8:43763207-43753805 | 20130731
          Length = 683

 Score = 1107 bits (2864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/687 (81%), Positives = 599/687 (87%), Gaps = 6/687 (0%)

Query: 1   MDAPQGGSGSGPDRDKPNAPIPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNRRK 60
           M++P  GS    +RD  N+PI VVSAFWK+FDLEKEKS+LDEQGLRIAENQENSQKNRRK
Sbjct: 1   MESPPSGS----ERDTTNSPISVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNRRK 56

Query: 61  LAENTRGFKKASPEEKLGLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP 120
           LAE+TR FKKASPE+K  LFN+LLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP
Sbjct: 57  LAESTRNFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP 116

Query: 121 ALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQATIXXXXXXXXXXXXXXXXX 180
           AL+S+AEQDLKLSE+ESENRKMKVELEEFRTEATHLKNQQATI                 
Sbjct: 117 ALASVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEK 176

Query: 181 XXXXXXXXXRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFELRA 240
                    R+LAEENQKTLEILKEREQ+LQDQLQ+AKESVSNM+KLHELAQNQLFELRA
Sbjct: 177 VKEIVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRA 236

Query: 241 QSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDTNS 300
           QS+E+RAAKQ+E  LLMDEVERAQTMLL LER+KG+L+SQL TANED+E KKSDNLD+N+
Sbjct: 237 QSEEERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNN 296

Query: 301 VLENSLNAKEKLISELNMELHNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKELQ 360
            LENSL AKEKLISELNMELHNIET LSNEREEHIN+VKK TAMLNEKE ++  MKKELQ
Sbjct: 297 ALENSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIVAMKKELQ 356

Query: 361 TRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ 420
           TRPTEK+VDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ
Sbjct: 357 TRPTEKIVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ 416

Query: 421 LKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDDWD 480
           LKV LSEKTS LETAEQK+ EL+AKVNEQQKLIQKLEDDI KGY+S+SKD KGTFLDDWD
Sbjct: 417 LKVKLSEKTSSLETAEQKVAELSAKVNEQQKLIQKLEDDISKGYNSSSKDHKGTFLDDWD 476

Query: 481 LSEAGGGEASES-TADQRQVALDQDQSSMLKVICNQXXXXXXXXXXXXXXXXQLKEKIGV 539
           LSEA   E SE    DQR  ALDQDQSSMLKVIC+Q                QLKEKIGV
Sbjct: 477 LSEANRSEVSEHQNMDQRH-ALDQDQSSMLKVICSQRDRFRTRLRETEEEIRQLKEKIGV 535

Query: 540 LTVELEKTKADNVKLYGKIRYVQDYSLEKVVSRGSKKYAEDVESGFASDVESKYKKIYED 599
           LT ELEKTKADNVKLYGKIRYVQDY++EKVVSRGSKKYAED+ESGF SDVESKYKKIYE+
Sbjct: 536 LTAELEKTKADNVKLYGKIRYVQDYNVEKVVSRGSKKYAEDLESGFTSDVESKYKKIYEE 595

Query: 600 DINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLY 659
           DINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLY
Sbjct: 596 DINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHVLVFTCLY 655

Query: 660 RMSALSYLSNGPEEFLIGEKNVDLPRA 686
           RMSALSYLS+G +E L GE+ +DLPR 
Sbjct: 656 RMSALSYLSHGSDETLAGERTIDLPRG 682


>Medtr8g103950.2 | CASP carboxy-terminal protein | HC |
           chr8:43763207-43755474 | 20130731
          Length = 574

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/577 (79%), Positives = 495/577 (85%), Gaps = 6/577 (1%)

Query: 1   MDAPQGGSGSGPDRDKPNAPIPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNRRK 60
           M++P     SG +RD  N+PI VVSAFWK+FDLEKEKS+LDEQGLRIAENQENSQKNRRK
Sbjct: 1   MESP----PSGSERDTTNSPISVVSAFWKDFDLEKEKSVLDEQGLRIAENQENSQKNRRK 56

Query: 61  LAENTRGFKKASPEEKLGLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP 120
           LAE+TR FKKASPE+K  LFN+LLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP
Sbjct: 57  LAESTRNFKKASPEDKSSLFNALLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYP 116

Query: 121 ALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQATIXXXXXXXXXXXXXXXXX 180
           AL+S+AEQDLKLSE+ESENRKMKVELEEFRTEATHLKNQQATI                 
Sbjct: 117 ALASVAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLEQQMEEK 176

Query: 181 XXXXXXXXXRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFELRA 240
                    R+LAEENQKTLEILKEREQ+LQDQLQ+AKESVSNM+KLHELAQNQLFELRA
Sbjct: 177 VKEIVEIKHRNLAEENQKTLEILKEREQLLQDQLQSAKESVSNMKKLHELAQNQLFELRA 236

Query: 241 QSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDTNS 300
           QS+E+RAAKQ+E  LLMDEVERAQTMLL LER+KG+L+SQL TANED+E KKSDNLD+N+
Sbjct: 237 QSEEERAAKQAEANLLMDEVERAQTMLLGLEREKGVLRSQLQTANEDSETKKSDNLDSNN 296

Query: 301 VLENSLNAKEKLISELNMELHNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKELQ 360
            LENSL AKEKLISELNMELHNIET LSNEREEHIN+VKK TAMLNEKE ++  MKKELQ
Sbjct: 297 ALENSLIAKEKLISELNMELHNIETTLSNEREEHINDVKKFTAMLNEKEASIVAMKKELQ 356

Query: 361 TRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ 420
           TRPTEK+VDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ
Sbjct: 357 TRPTEKIVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQ 416

Query: 421 LKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDDWD 480
           LKV LSEKTS LETAEQK+ EL+AKVNEQQKLIQKLEDDI KGY+S+SKD KGTFLDDWD
Sbjct: 417 LKVKLSEKTSSLETAEQKVAELSAKVNEQQKLIQKLEDDISKGYNSSSKDHKGTFLDDWD 476

Query: 481 LSEAGGGEASE-STADQRQVALDQDQSSMLKVICNQXXXXXXXXXXXXXXXXQLKEKIGV 539
           LSEA   E SE    DQR  ALDQDQSSMLKVIC+Q                QLKEKIGV
Sbjct: 477 LSEANRSEVSEHQNMDQRH-ALDQDQSSMLKVICSQRDRFRTRLRETEEEIRQLKEKIGV 535

Query: 540 LTVELEKTKADNVKLYGKIRYVQDYSLEKVVSRGSKK 576
           LT ELEKTKADNVKLYGKIRYVQDY++EKVVSRGSKK
Sbjct: 536 LTAELEKTKADNVKLYGKIRYVQDYNVEKVVSRGSKK 572