Miyakogusa Predicted Gene

Lj2g3v0741930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0741930.1 Non Characterized Hit- tr|I1KIV9|I1KIV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16330
PE,32.27,0.000000000000001,seg,NULL,CUFF.35325.1
         (187 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g084620.1 | transmembrane protein, putative | HC | chr6:31...   138   3e-33

>Medtr6g084620.1 | transmembrane protein, putative | HC |
           chr6:31773758-31776267 | 20130731
          Length = 171

 Score =  138 bits (347), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 6/140 (4%)

Query: 49  LHLVSAKKLSRPRRSDLNIPETTTTIADQEPQWTAEIGAGTGNDGYPDRALPGS--EVDF 106
           LH+VSAKK+S   RS  N P T T     EP+   EI   +  D   +   PG+  + DF
Sbjct: 35  LHIVSAKKISS--RSRRNQP-TETVDEKIEPRNEVEIPFYSDEDWPFEWRPPGTYKDPDF 91

Query: 107 FEGPQWDTVGLMGEYLWVAGVVFAILAGLFGAANYNQGASDFKDTPAYKESVQSRELLEQ 166
           FEG QW+TVG +GE+LW+ GV+FA+  G + A NYN GASDFK+TPAYKES QS+ELLEQ
Sbjct: 92  FEGSQWNTVGFVGEWLWILGVLFAVFGGGYAAINYNLGASDFKETPAYKES-QSQELLEQ 150

Query: 167 PDASDSDVFESNPTEVAPSL 186
           P+ S+SD+F+SNPTEVAPSL
Sbjct: 151 PETSESDIFDSNPTEVAPSL 170