Miyakogusa Predicted Gene

Lj2g3v0740640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0740640.1 Non Characterized Hit- tr|D8RXR2|D8RXR2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,46.32,3e-19,DNase
I-like,Endonuclease/exonuclease/phosphatase; no description,NULL;
CARBON CATABOLITE REPRESSOR ,CUFF.35305.1
         (173 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g084560.1 | carbon catabolite repressor-like protein | HC ...   177   5e-45
Medtr6g084560.2 | carbon catabolite repressor-like protein | HC ...   177   6e-45
Medtr6g084560.3 | carbon catabolite repressor-like protein | HC ...   176   8e-45
Medtr8g103870.1 | carbon catabolite repressor-like protein | HC ...   105   2e-23
Medtr1g011720.2 | carbon catabolite repressor-like protein | HC ...    84   6e-17
Medtr1g011720.1 | carbon catabolite repressor-like protein | HC ...    84   6e-17
Medtr1g054545.1 | endonuclease/exonuclease/phosphatase family pr...    59   2e-09
Medtr5g026280.1 | carbon catabolite repressor-like protein | HC ...    59   2e-09
Medtr5g026280.2 | carbon catabolite repressor-like protein | HC ...    59   3e-09
Medtr1g054605.1 | carbon catabolite repressor-like protein | HC ...    58   4e-09
Medtr1g054605.2 | carbon catabolite repressor-like protein | HC ...    58   4e-09
Medtr7g107240.1 | carbon catabolite repressor-like protein | HC ...    58   5e-09
Medtr1g054605.3 | carbon catabolite repressor-like protein | HC ...    58   5e-09
Medtr1g054605.4 | carbon catabolite repressor-like protein | HC ...    58   5e-09
Medtr1g054535.2 | carbon catabolite repressor-like protein | HC ...    57   6e-09
Medtr1g054535.1 | carbon catabolite repressor-like protein | HC ...    57   9e-09
Medtr5g026280.3 | carbon catabolite repressor-like protein | HC ...    52   2e-07

>Medtr6g084560.1 | carbon catabolite repressor-like protein | HC |
           chr6:31685655-31691407 | 20130731
          Length = 433

 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/153 (69%), Positives = 118/153 (77%), Gaps = 6/153 (3%)

Query: 25  RRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFS----RRWVFSSKDCSNCMDKV 80
           RRKR++LP    SS  ++ SKR +HS  + S  N    S    R+WVFSS+D S+C D +
Sbjct: 3   RRKRENLPL--ESSTGNYPSKRRKHSHFESSSSNRLASSSSSSRKWVFSSEDYSDCADTI 60

Query: 81  VVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL 140
           VVVSYNILGVENAS HLDLYSNIPR FL W RRK LILEEI+ YNASILCFQEVDHF+DL
Sbjct: 61  VVVSYNILGVENASNHLDLYSNIPRRFLDWGRRKRLILEEIDSYNASILCFQEVDHFDDL 120

Query: 141 DGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           D LFQNNGFK VYK RTG A DGCAIFWKDKLF
Sbjct: 121 DDLFQNNGFKSVYKGRTGEANDGCAIFWKDKLF 153


>Medtr6g084560.2 | carbon catabolite repressor-like protein | HC |
           chr6:31685655-31691390 | 20130731
          Length = 366

 Score =  177 bits (448), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/153 (69%), Positives = 118/153 (77%), Gaps = 6/153 (3%)

Query: 25  RRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFS----RRWVFSSKDCSNCMDKV 80
           RRKR++LP    SS  ++ SKR +HS  + S  N    S    R+WVFSS+D S+C D +
Sbjct: 3   RRKRENLPL--ESSTGNYPSKRRKHSHFESSSSNRLASSSSSSRKWVFSSEDYSDCADTI 60

Query: 81  VVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL 140
           VVVSYNILGVENAS HLDLYSNIPR FL W RRK LILEEI+ YNASILCFQEVDHF+DL
Sbjct: 61  VVVSYNILGVENASNHLDLYSNIPRRFLDWGRRKRLILEEIDSYNASILCFQEVDHFDDL 120

Query: 141 DGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           D LFQNNGFK VYK RTG A DGCAIFWKDKLF
Sbjct: 121 DDLFQNNGFKSVYKGRTGEANDGCAIFWKDKLF 153


>Medtr6g084560.3 | carbon catabolite repressor-like protein | HC |
           chr6:31685655-31690022 | 20130731
          Length = 301

 Score =  176 bits (447), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/153 (69%), Positives = 118/153 (77%), Gaps = 6/153 (3%)

Query: 25  RRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFS----RRWVFSSKDCSNCMDKV 80
           RRKR++LP    SS  ++ SKR +HS  + S  N    S    R+WVFSS+D S+C D +
Sbjct: 3   RRKRENLPL--ESSTGNYPSKRRKHSHFESSSSNRLASSSSSSRKWVFSSEDYSDCADTI 60

Query: 81  VVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL 140
           VVVSYNILGVENAS HLDLYSNIPR FL W RRK LILEEI+ YNASILCFQEVDHF+DL
Sbjct: 61  VVVSYNILGVENASNHLDLYSNIPRRFLDWGRRKRLILEEIDSYNASILCFQEVDHFDDL 120

Query: 141 DGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           D LFQNNGFK VYK RTG A DGCAIFWKDKLF
Sbjct: 121 DDLFQNNGFKSVYKGRTGEANDGCAIFWKDKLF 153


>Medtr8g103870.1 | carbon catabolite repressor-like protein | HC |
           chr8:43718712-43713825 | 20130731
          Length = 414

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/110 (42%), Positives = 66/110 (60%)

Query: 64  RRWVFSSKDCSNCMDKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINH 123
           RRWV +        ++  V SYNIL   NAS+H DLY N+P  ++ W+RR+ ++ EE+  
Sbjct: 40  RRWVEAFDQSLASPERFTVASYNILADRNASQHTDLYVNVPSRYINWNRRQKILSEELFE 99

Query: 124 YNASILCFQEVDHFNDLDGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           +N  I+C QEVD + +L  +    G+ G YK RTG   DGCA+FWK   F
Sbjct: 100 WNPDIICLQEVDMYVELSNILVKAGYAGSYKRRTGDTSDGCAMFWKADKF 149


>Medtr1g011720.2 | carbon catabolite repressor-like protein | HC |
           chr1:2193529-2203920 | 20130731
          Length = 769

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 82  VVSYNILGVENASRHL-DLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL 140
           V+SYNIL    A  H   LY +IP   L W  RKS I+ E+  ++A I+C QEVD F++L
Sbjct: 177 VLSYNILADYLAMDHWRKLYYHIPSYMLNWQWRKSKIVLELGLWSADIMCLQEVDRFHEL 236

Query: 141 DGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           +   +  G++G++K RTG   DGCAIFW+   F
Sbjct: 237 EEDLKFKGYRGIWKMRTGNPVDGCAIFWRTSRF 269


>Medtr1g011720.1 | carbon catabolite repressor-like protein | HC |
           chr1:2193529-2203920 | 20130731
          Length = 837

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 82  VVSYNILGVENASRHL-DLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL 140
           V+SYNIL    A  H   LY +IP   L W  RKS I+ E+  ++A I+C QEVD F++L
Sbjct: 177 VLSYNILADYLAMDHWRKLYYHIPSYMLNWQWRKSKIVLELGLWSADIMCLQEVDRFHEL 236

Query: 141 DGLFQNNGFKGVYKARTGGARDGCAIFWKDKLF 173
           +   +  G++G++K RTG   DGCAIFW+   F
Sbjct: 237 EEDLKFKGYRGIWKMRTGNPVDGCAIFWRTSRF 269


>Medtr1g054545.1 | endonuclease/exonuclease/phosphatase family
           protein | LC | chr1:23636685-23642222 | 20130731
          Length = 766

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 30/166 (18%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H E D    + G F+              
Sbjct: 401 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLELDRRMTSSGTFT-------------- 446

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLYS  P   L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 447 ----ALSYNVLSETCASN--DLYSYCPPWALSWPYRRQNLLREIIDYAADIICLQEVQND 500

Query: 136 HFNDLDG-LFQNNGFKGVYKART-------GGARDGCAIFWKDKLF 173
           H+++        +G+  ++K +T       G   DGCA F++   F
Sbjct: 501 HYDEFFAPELDKHGYHSLFKRKTTEVIVSSGNTIDGCATFFRRDKF 546


>Medtr5g026280.1 | carbon catabolite repressor-like protein | HC |
           chr5:10804381-10809090 | 20130731
          Length = 391

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 82  VVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL- 140
           +VSYNIL           YS  P S L W  R + IL+ + +  A   C QEVD F+   
Sbjct: 54  LVSYNILAQVYVKSSFFPYS--PPSSLKWKYRSNSILDVLKNLGADFFCLQEVDEFDSFY 111

Query: 141 DGLFQNNGFKGVYKARTG-GARDGCAIFWK 169
            G  Q  G+  +Y  R+G   RDGC IF+K
Sbjct: 112 KGKMQELGYSSIYMKRSGEKKRDGCGIFYK 141


>Medtr5g026280.2 | carbon catabolite repressor-like protein | HC |
           chr5:10804382-10809090 | 20130731
          Length = 371

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 4/90 (4%)

Query: 82  VVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL- 140
           +VSYNIL           YS  P S L W  R + IL+ + +  A   C QEVD F+   
Sbjct: 34  LVSYNILAQVYVKSSFFPYS--PPSSLKWKYRSNSILDVLKNLGADFFCLQEVDEFDSFY 91

Query: 141 DGLFQNNGFKGVYKARTG-GARDGCAIFWK 169
            G  Q  G+  +Y  R+G   RDGC IF+K
Sbjct: 92  KGKMQELGYSSIYMKRSGEKKRDGCGIFYK 121


>Medtr1g054605.1 | carbon catabolite repressor-like protein | HC |
           chr1:23714281-23719289 | 20130731
          Length = 504

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 28/160 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 110 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 155

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLYS  P   L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 156 ----ALSYNVLSETCASN--DLYSYCPPWALSWPYRRQNLLREIVDYAADIICLQEVQND 209

Query: 136 HFNDLDGL-FQNNGFKGVYKART-----GGARDGCAIFWK 169
           H+ +        +G+  ++K +T     G   DGCA F++
Sbjct: 210 HYEEFFAPELDKHGYHSLFKRKTTEVSSGTTIDGCATFFR 249


>Medtr1g054605.2 | carbon catabolite repressor-like protein | HC |
           chr1:23714248-23719289 | 20130731
          Length = 504

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 28/160 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 110 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 155

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLYS  P   L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 156 ----ALSYNVLSETCASN--DLYSYCPPWALSWPYRRQNLLREIVDYAADIICLQEVQND 209

Query: 136 HFNDLDGL-FQNNGFKGVYKART-----GGARDGCAIFWK 169
           H+ +        +G+  ++K +T     G   DGCA F++
Sbjct: 210 HYEEFFAPELDKHGYHSLFKRKTTEVSSGTTIDGCATFFR 249


>Medtr7g107240.1 | carbon catabolite repressor-like protein | HC |
           chr7:43729349-43734359 | 20130731
          Length = 568

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 12/99 (12%)

Query: 81  VVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--DHFN 138
            V+SYNIL    AS   DLY+  P   L+W  R+  +L EI  Y A I+C QEV  DH++
Sbjct: 219 TVLSYNILSDSYASN--DLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYD 276

Query: 139 DLDGL-FQNNGFKGVYKARTG-------GARDGCAIFWK 169
           +        +G+ G+YK +T           DGCA F++
Sbjct: 277 EFFAPELDKHGYHGLYKRKTNEVYNGNINTIDGCATFFR 315


>Medtr1g054605.3 | carbon catabolite repressor-like protein | HC |
           chr1:23714281-23719289 | 20130731
          Length = 475

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 28/160 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 110 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 155

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLYS  P   L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 156 ----ALSYNVLSETCASN--DLYSYCPPWALSWPYRRQNLLREIVDYAADIICLQEVQND 209

Query: 136 HFNDLDGL-FQNNGFKGVYKART-----GGARDGCAIFWK 169
           H+ +        +G+  ++K +T     G   DGCA F++
Sbjct: 210 HYEEFFAPELDKHGYHSLFKRKTTEVSSGTTIDGCATFFR 249


>Medtr1g054605.4 | carbon catabolite repressor-like protein | HC |
           chr1:23714248-23719289 | 20130731
          Length = 475

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 28/160 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 110 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 155

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLYS  P   L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 156 ----ALSYNVLSETCASN--DLYSYCPPWALSWPYRRQNLLREIVDYAADIICLQEVQND 209

Query: 136 HFNDLDGL-FQNNGFKGVYKART-----GGARDGCAIFWK 169
           H+ +        +G+  ++K +T     G   DGCA F++
Sbjct: 210 HYEEFFAPELDKHGYHSLFKRKTTEVSSGTTIDGCATFFR 249


>Medtr1g054535.2 | carbon catabolite repressor-like protein | HC |
           chr1:23604507-23609333 | 20130731
          Length = 555

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 28/164 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 163 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 208

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLY   P+  L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 209 ----ALSYNVLSETCASN--DLYRYCPQWALSWPYRRQNLLREIIDYAADIICLQEVQND 262

Query: 136 HFNDLDG-LFQNNGFKGVYKART-----GGARDGCAIFWKDKLF 173
           H+++        +G+  ++K +T     G   DGCA F++   F
Sbjct: 263 HYDEFFAPELDKHGYHSLFKRKTTEVSSGNTIDGCATFFRRDKF 306


>Medtr1g054535.1 | carbon catabolite repressor-like protein | HC |
           chr1:23604491-23611188 | 20130731
          Length = 592

 Score = 57.0 bits (136), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 28/164 (17%)

Query: 18  PSGDMVRRRKRQSLPPPGNSSGRHHRSKRMRHSESDHSGLNCGVFSRRWVFSSKDCSNCM 77
           P G     +  + +P P     R  R   M H + D    + G F+              
Sbjct: 200 PVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLDLDRRMTSSGTFT-------------- 245

Query: 78  DKVVVVSYNILGVENASRHLDLYSNIPRSFLAWDRRKSLILEEINHYNASILCFQEV--D 135
                +SYN+L    AS   DLY   P+  L+W  R+  +L EI  Y A I+C QEV  D
Sbjct: 246 ----ALSYNVLSETCASN--DLYRYCPQWALSWPYRRQNLLREIIDYAADIICLQEVQND 299

Query: 136 HFNDLDG-LFQNNGFKGVYKART-----GGARDGCAIFWKDKLF 173
           H+++        +G+  ++K +T     G   DGCA F++   F
Sbjct: 300 HYDEFFAPELDKHGYHSLFKRKTTEVSSGNTIDGCATFFRRDKF 343


>Medtr5g026280.3 | carbon catabolite repressor-like protein | HC |
           chr5:10804566-10809085 | 20130731
          Length = 339

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)

Query: 104 PRSFLAWDRRKSLILEEINHYNASILCFQEVDHFNDL-DGLFQNNGFKGVYKARTG-GAR 161
           P S L W  R + IL+ + +  A   C QEVD F+    G  Q  G+  +Y  R+G   R
Sbjct: 22  PPSSLKWKYRSNSILDVLKNLGADFFCLQEVDEFDSFYKGKMQELGYSSIYMKRSGEKKR 81

Query: 162 DGCAIFWK 169
           DGC IF+K
Sbjct: 82  DGCGIFYK 89