Miyakogusa Predicted Gene
- Lj2g3v0737520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0737520.1 Non Characterized Hit- tr|I1N4C8|I1N4C8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25071
PE,41.59,0.0000000000007,STRUCTURAL CONSTITUENT OF RIBOSOME,NULL; 60S
RIBOSOMAL PROTEIN L34,Ribosomal protein L34Ae; seg,NULL,CUFF.35293.1
(595 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g084440.1 | DUF1666 family protein | HC | chr6:31613376-31... 660 0.0
Medtr6g084440.2 | DUF1666 family protein | HC | chr6:31613376-31... 652 0.0
Medtr8g104270.1 | DUF1666 family protein | HC | chr8:43907131-43... 483 e-136
Medtr4g005350.1 | DUF1666 family protein | HC | chr4:219435-2154... 156 5e-38
Medtr5g040600.1 | transmembrane protein, putative | HC | chr5:17... 83 8e-16
Medtr7g010160.1 | DUF1666 family protein | HC | chr7:2428673-242... 79 2e-14
Medtr8g467380.1 | transmembrane protein, putative | HC | chr8:24... 50 8e-06
>Medtr6g084440.1 | DUF1666 family protein | HC |
chr6:31613376-31617663 | 20130731
Length = 604
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/617 (59%), Positives = 412/617 (66%), Gaps = 35/617 (5%)
Query: 1 MPCSKEEALVRLFYNAXXXXXXXXXXXXXXXXXXXXXXXXITSYSIFQRDQQYDYVSSEC 60
MPCSKEEAL+RLFYN+ I+SYS+FQ DQQ
Sbjct: 1 MPCSKEEALIRLFYNSSSSFKLLFLFLFSSSTLLLKILNFISSYSLFQSDQQ----YEYV 56
Query: 61 DXXXXXXXXXIHESYSYAGSIDREDHLVADIVCGGETLLFLHKNHPQGNNSS-------- 112
I ESY Y SI++ DHLVADI+ GGE L+FLH N+ N S
Sbjct: 57 SSEEEEEEEEIQESYCYEDSIEK-DHLVADIIYGGEALVFLHSNNESQRNDSFSYEEEEE 115
Query: 113 -------SEEFITPRDSLIXXXXXXXX-XXXXLSIHN-SPLVSXXXXXXXXXXXXXXXXP 163
EEFITP+DS I L +H+ SP+VS
Sbjct: 116 EEEEEEKEEEFITPQDSFIEEFSSEENFSTENLYVHHKSPIVSDFETETNETEIQTEE-- 173
Query: 164 AEDADSVPNSVPIESRPTSPITLNIHK-SDIVDSDKNCDENHVHIGIIRNKKVQEENLTR 222
EDADSVP+SVPIE+R TSPITLN++K D+V+SDKN DE ++ IG+I+N+KVQEE TR
Sbjct: 174 -EDADSVPDSVPIENRTTSPITLNLYKRDDLVESDKNYDEKYIDIGVIKNEKVQEEKTTR 232
Query: 223 DERFFVIGPTQLE-TKKLIVDEKDEEEIYGDXXXXXXXXXXXXXXXXXINCRDSGTDDPF 281
DE FVIGPTQLE KKLI+DEKD+EEIY D I CRDSGTDD
Sbjct: 233 DESVFVIGPTQLERNKKLIIDEKDDEEIYEDSTTIGSTSKDSSDWRSSIICRDSGTDD-- 290
Query: 282 SSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRIVHKIS 341
SSSRRSCPKWESY VFQKYDEEMSFL+RISAQKLHETESLRSIKVAPRSISGRIV+K+S
Sbjct: 291 -SSSRRSCPKWESYAVFQKYDEEMSFLERISAQKLHETESLRSIKVAPRSISGRIVYKLS 349
Query: 342 TMNKKPDDTRHNPYHELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPETIAXX 401
+MNKKP+D HNPY ELE AYVAQIC+TWEALNWNYKNFQ+KRAS + DVGCP TIA
Sbjct: 350 SMNKKPEDISHNPYCELEGAYVAQICLTWEALNWNYKNFQTKRAS--NVDVGCPATIAQQ 407
Query: 402 XXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKEN---SLKIS 458
RYVENEPYE GRRPEIYARMRHMAPKLLLVPEYRESDDD KEN + KIS
Sbjct: 408 FQQFQVLLQRYVENEPYEFGRRPEIYARMRHMAPKLLLVPEYRESDDDQKENIGFNTKIS 467
Query: 459 SGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLXXXXXXXXXXX 518
S SFLVIMEDGIRTFMNFLKADKEKPCQ+LA+YFRRN+RGL+DPTL+RL
Sbjct: 468 SASFLVIMEDGIRTFMNFLKADKEKPCQILASYFRRNQRGLVDPTLIRLLKKVNQKKKIK 527
Query: 519 XXDLRRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCEEKMSKVRV 578
DLRRSH K+VSRVLRMSD++E QLHWCEEK SKVRV
Sbjct: 528 IKDLRRSHKCLRKRNLKEEEEMEILMALIDLKLVSRVLRMSDMNENQLHWCEEKNSKVRV 587
Query: 579 MDGKLQRDSTPLFFPAH 595
+DGKLQRDSTPLFFP+H
Sbjct: 588 IDGKLQRDSTPLFFPSH 604
>Medtr6g084440.2 | DUF1666 family protein | HC |
chr6:31613376-31617656 | 20130731
Length = 602
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/617 (59%), Positives = 410/617 (66%), Gaps = 37/617 (5%)
Query: 1 MPCSKEEALVRLFYNAXXXXXXXXXXXXXXXXXXXXXXXXITSYSIFQRDQQYDYVSSEC 60
MPCSKEEAL+RLFYN+ I+SYS+FQ DQQ
Sbjct: 1 MPCSKEEALIRLFYNSSSSFKLLFLFLFSSSTLLLKILNFISSYSLFQSDQQ----YEYV 56
Query: 61 DXXXXXXXXXIHESYSYAGSIDREDHLVADIVCGGETLLFLHKNHPQGNNSS-------- 112
I ESY Y SI++ DHLVADI+ GGE L+FLH N+ N S
Sbjct: 57 SSEEEEEEEEIQESYCYEDSIEK-DHLVADIIYGGEALVFLHSNNESQRNDSFSYEEEEE 115
Query: 113 -------SEEFITPRDSLIXXXXXXXX-XXXXLSIHN-SPLVSXXXXXXXXXXXXXXXXP 163
EEFITP+DS I L +H+ SP+VS
Sbjct: 116 EEEEEEKEEEFITPQDSFIEEFSSEENFSTENLYVHHKSPIVSDFETETNETEIQTEE-- 173
Query: 164 AEDADSVPNSVPIESRPTSPITLNIHK-SDIVDSDKNCDENHVHIGIIRNKKVQEENLTR 222
EDADSVP+SVPIE+R TSPITLN++K D+V+SDKN DE ++ IG+I+N+KVQEE TR
Sbjct: 174 -EDADSVPDSVPIENRTTSPITLNLYKRDDLVESDKNYDEKYIDIGVIKNEKVQEEKTTR 232
Query: 223 DERFFVIGPTQLE-TKKLIVDEKDEEEIYGDXXXXXXXXXXXXXXXXXINCRDSGTDDPF 281
DE FVIGPTQLE KKLI+DEKD+EEIY D I CRDSGTDD
Sbjct: 233 DESVFVIGPTQLERNKKLIIDEKDDEEIYEDSTTIGSTSKDSSDWRSSIICRDSGTDD-- 290
Query: 282 SSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLHETESLRSIKVAPRSISGRIVHKIS 341
SSSRRSCPKWESY VFQKYDEEMSFL+RISAQKLHETESLRSIKVAPRSISGRIV+K+S
Sbjct: 291 -SSSRRSCPKWESYAVFQKYDEEMSFLERISAQKLHETESLRSIKVAPRSISGRIVYKLS 349
Query: 342 TMNKKPDDTRHNPYHELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPETIAXX 401
+MNKKP+D HNPY ELE AYVAQIC+TWEALNWNYKNFQ+KRAS + DVGCP TIA
Sbjct: 350 SMNKKPEDISHNPYCELEGAYVAQICLTWEALNWNYKNFQTKRAS--NVDVGCPATIAQQ 407
Query: 402 XXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKEN---SLKIS 458
RYVENEPYE GRRPEIYARMRHMAPKLLLVPEYR DDD KEN + KIS
Sbjct: 408 FQQFQVLLQRYVENEPYEFGRRPEIYARMRHMAPKLLLVPEYR--DDDQKENIGFNTKIS 465
Query: 459 SGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLXXXXXXXXXXX 518
S SFLVIMEDGIRTFMNFLKADKEKPCQ+LA+YFRRN+RGL+DPTL+RL
Sbjct: 466 SASFLVIMEDGIRTFMNFLKADKEKPCQILASYFRRNQRGLVDPTLIRLLKKVNQKKKIK 525
Query: 519 XXDLRRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCEEKMSKVRV 578
DLRRSH K+VSRVLRMSD++E QLHWCEEK SKVRV
Sbjct: 526 IKDLRRSHKCLRKRNLKEEEEMEILMALIDLKLVSRVLRMSDMNENQLHWCEEKNSKVRV 585
Query: 579 MDGKLQRDSTPLFFPAH 595
+DGKLQRDSTPLFFP+H
Sbjct: 586 IDGKLQRDSTPLFFPSH 602
>Medtr8g104270.1 | DUF1666 family protein | HC |
chr8:43907131-43910645 | 20130731
Length = 563
Score = 483 bits (1242), Expect = e-136, Method: Compositional matrix adjust.
Identities = 287/604 (47%), Positives = 355/604 (58%), Gaps = 52/604 (8%)
Query: 1 MPCSKEEALVRLFYNAXXXXXXXXXXXXXXXXXXXXXXXXITSYSIFQRDQQYDYVSSEC 60
MPC KE+AL++LF N + + QRDQQY+YV S+
Sbjct: 1 MPCPKEQALLKLFNNVSTSLQLLFLVLFSIAIFLVTFLTFTGRFPLIQRDQQYEYVYSD- 59
Query: 61 DXXXXXXXXXIHESYSYAGSIDREDHLVADIVCGGETLLFLHKNHPQGNNSSSEEFITPR 120
E YS S D+E+ + SEEFI+PR
Sbjct: 60 -DEEDEEDEEAPEEYSCVHSSDKEER----------------------QRTHSEEFISPR 96
Query: 121 DSLIXXXXXXXXXXXXLSIHNSPLVSXXXXXXXXXXXXXXXXPAEDADSVPNSVPIESRP 180
+S + LS+H SP VS DSVPN V ES P
Sbjct: 97 ESFVEGSEENDCSET-LSMHQSPQVSDFENKEVGAFQENFQS-RNVVDSVPNYVEFESSP 154
Query: 181 TSP-ITLNIHKSDIVDSDKNCDENHVHIGIIRNKKVQEENLTRDERFFVIGPTQLETKKL 239
TS I LN++KS+ ++ +++ V GII+NKKVQE + +RDERFFV QL +KKL
Sbjct: 155 TSSMINLNLYKSN-----RHHNDDQVGHGIIKNKKVQETSHSRDERFFVFASKQLNSKKL 209
Query: 240 IVDEKDEEE---IYGDXXXXXXXXXXXXXXXXXINCRDSGTDDPFSSSSRRSCPKWESYT 296
IVDE+ ++ +Y +CR+S T+D FS+SSRRSCPKWESYT
Sbjct: 210 IVDEEKDDVDDFVYSSSECRSS-----------THCRESETEDEFSTSSRRSCPKWESYT 258
Query: 297 VFQKYDEEMSFLDRISAQ-KLHETESLRSIKVAPRSISGRIVHKISTMNKKPDDTRHNPY 355
+FQ+YDE+ +FL+RISA+ K HETESLRSI+++PRSIS RI +K+S++NKKP D HNPY
Sbjct: 259 LFQRYDEDNAFLERISARNKRHETESLRSIQMSPRSISERIANKLSSINKKPTDVGHNPY 318
Query: 356 HELEAAYVAQICITWEALNWNYKNFQSKRA--SRQDGDVGCPETIAXXXXXXXXXXXRYV 413
ELEAAYVAQIC+TWEAL+WNY NF+ K A SR D D+GCP TIA RYV
Sbjct: 319 SELEAAYVAQICLTWEALSWNYTNFRYKHASQSRHDFDIGCPATIAQQFQQFQVLLQRYV 378
Query: 414 ENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKENSL--KISSGSFLVIMEDGIR 471
ENEPYEHGRRPEIYARMR +APKLLLVPEY +S++D ++ KISS SFL IME GIR
Sbjct: 379 ENEPYEHGRRPEIYARMRLLAPKLLLVPEYHDSEEDQMDSDFHSKISSASFLKIMEGGIR 438
Query: 472 TFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLXXXXXXXXXXXXXDLRRSHXXXXX 531
TFMNFLK DKEK CQ+L YFRRN+RG++DPTLL+L DL
Sbjct: 439 TFMNFLKTDKEKSCQILTYYFRRNKRGMVDPTLLKLMKKVNQKKRVKVKDLSHLGKGLRK 498
Query: 532 XXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCEEKMSKVRVMDGKLQRD-STPL 590
KVVSRVLRM +LSE+QLHWCE+KMSKVRV++GKL RD STPL
Sbjct: 499 RKLKVEEEIEILMGLIDLKVVSRVLRMKELSEQQLHWCEKKMSKVRVVEGKLCRDYSTPL 558
Query: 591 FFPA 594
FFP+
Sbjct: 559 FFPS 562
>Medtr4g005350.1 | DUF1666 family protein | HC | chr4:219435-215465
| 20130731
Length = 425
Score = 156 bits (395), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 159/318 (50%), Gaps = 22/318 (6%)
Query: 292 WESY-TVFQKYDEEMSFLDRISAQKLHETE--SLRSIKVAPRSISGRIVHKISTMNKK-- 346
W + VF+KY E M F DR++ Q L E S + +PRS S ++ + ++ K
Sbjct: 115 WRGFDAVFEKYCERMLFFDRMNVQHLGEIGKGSQNTSTPSPRSTSKKLASPLRCLSLKKF 174
Query: 347 --PDD-TRHN------PYHELEAAYVAQICITWEALNWNYKNFQSKRASRQDGDVGCPET 397
PDD T H PY ++E AYV QIC+TWEAL+ Y + S + S Q + C
Sbjct: 175 EGPDDETEHLQEPENIPYLDIETAYVGQICLTWEALHCQYSHM-SYKISWQHENPTCYSR 233
Query: 398 IAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDD-HKENSLK 456
A R++ENEP+E G RPEIYAR R+ PKLL VP R SD + E+ ++
Sbjct: 234 SAQEFQQFQVLLQRFIENEPFEQGPRPEIYARSRNTLPKLLQVPNIRGSDHEITDESDIR 293
Query: 457 ISSGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRRGLIDPTLLRLXXXXXXXXX 516
+ + + I+E+ I TF FLK DK+K V+ + +N+ T L+
Sbjct: 294 VLAPDLIRIIENSILTFRLFLKRDKKK-SSVINLFGNQNQLA----TPLQQVQSTLEKKV 348
Query: 517 XXXXDLRRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCEEKMSKV 576
+LR+ K++SRVLRM+ ++ EQL WCEEKM K+
Sbjct: 349 VKLKELRKKG-WRKNSWPQKHEDVQLLLGLIDAKILSRVLRMTRMTREQLFWCEEKMKKL 407
Query: 577 RVMDGKLQRDSTPLFFPA 594
+ + +L+RD P+ FP
Sbjct: 408 DLSNNRLERDPCPILFPC 425
>Medtr5g040600.1 | transmembrane protein, putative | HC |
chr5:17838417-17832271 | 20130731
Length = 909
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 138/324 (42%), Gaps = 39/324 (12%)
Query: 297 VFQKYDEEMSFLDRISAQKLHET------ESLRSIKVAPRSISGRIVHKISTMNKKPDDT 350
V++ Y E+M LD ++ Q +H + L+ I + +IS I+ + K T
Sbjct: 597 VYKSYAEKMRKLDILNYQTMHALGLLQLKDPLKLISIPKSTISNGIISQNLWPRKSTKIT 656
Query: 351 R-------HNPYHELEAAYVAQICITWEALNW------NYKNFQSKRASRQDGDVGCPET 397
H + +LE YV QIC++WE L W + + S+R+ R +
Sbjct: 657 SDPFLKLVHQLHRDLELVYVGQICLSWEILCWLHMKAIELQQYDSQRSHRYN-------H 709
Query: 398 IAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYRESDDDHKENSLKI 457
+A R++ENEP++ G R + Y + R + LL VP ++ +E+ I
Sbjct: 710 VAGEFQLFQVLMQRFIENEPFQGGPRIQNYVKNRCVIRNLLHVPAIKDDIKGGEEDP--I 767
Query: 458 SSGSFLVIMEDGIRTFMNFLKADKEKP-CQVLAAYFRRNRRGLIDPTL------LRLXXX 510
+SG I+++ +R F F++ DK+ V++ ++ L DP + +R+
Sbjct: 768 ASGRLQDIIKESMRVFWEFVRTDKDNGNVNVIS---KQIGSDLKDPAIANLLVDIRIQLQ 824
Query: 511 XXXXXXXXXXDLRRSHXXXXXXXXXXXXXXXXXXXXXXXKVVSRVLRMSDLSEEQLHWCE 570
+++SRV+ MS L +EQ+ WC
Sbjct: 825 KKDKKLKDIVRTGNCIVKKFQKHHEDQLDHEQLVAQVGLRLISRVINMSQLRKEQVLWCS 884
Query: 571 EKMSKVRVMDGKL-QRDSTPLFFP 593
EK+++++ + K+ + + L FP
Sbjct: 885 EKLNRIKFLSRKIVHVEPSFLLFP 908
>Medtr7g010160.1 | DUF1666 family protein | HC |
chr7:2428673-2422982 | 20130731
Length = 745
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 142/342 (41%), Gaps = 38/342 (11%)
Query: 282 SSSSRRSCPKWESYTVFQKYDEEMSFLDRISAQKLH------ETESLRSIKVAPRS---I 332
SS+ PK+ ++ Y E M D ++ QK++ + L+S + +S I
Sbjct: 411 GSSTTNELPKF-----YRSYRERMRKFDILNYQKMYALGLMKSKDPLKSFSIHKKSSSTI 465
Query: 333 SGRIVHKISTMNKKPDDTRHNP--------YHELEAAYVAQICITWEALNWNYKNFQSKR 384
+ + I++ ++ + +P Y +LE YV +C++WE L+W Y+
Sbjct: 466 TCILPRGINSFFRRNRNIDADPMKKFIRELYSDLEMVYVGHLCLSWEFLHWEYEKALKIW 525
Query: 385 ASRQDGDVGCPETIAXXXXXXXXXXXRYVENEPYEHGRRPEIYARMRHMAPKLLLVPEYR 444
S Q G E +A R++ENEP++ G R E YAR R KLL VP +
Sbjct: 526 ESDQYGLRRFNE-VAGEFQQFQVLLQRFIENEPFQ-GPRVENYARNRCAMKKLLQVPVIK 583
Query: 445 ESDDDHKE-------NSLKISSGSFLVIMEDGIRTFMNFLKADKEKPCQVLAAYFRRNRR 497
E K+ ++ I+S + I+E+ IRT F++ D E + +
Sbjct: 584 EDKGKDKKKYRKREVDNDAITSDMLVEILEESIRTIWRFIRGD-EDASNLTIKCLKEQHV 642
Query: 498 GLIDPTLLRLXXXXXXXXXXXXXDLR---RSHXXXXXXXXXXXXXX---XXXXXXXXXKV 551
L DP +L LR RS K+
Sbjct: 643 ELQDPADSQLLVEILTDLQKKEKRLREVLRSGSCILKKFKKHEDETDPVLYFFSQVDLKL 702
Query: 552 VSRVLRMSDLSEEQLHWCEEKMSKVRVMDGKLQRDSTPLFFP 593
V RVL MS ++ +QL WC K++K+ ++ ++ + + L FP
Sbjct: 703 VCRVLNMSRITTDQLAWCRSKLNKINFVNRRIHVEPSFLLFP 744
>Medtr8g467380.1 | transmembrane protein, putative | HC |
chr8:24203821-24210537 | 20130731
Length = 829
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 34/147 (23%)
Query: 355 YHELEAAYVAQICITWEALNWNY------KNFQSKRASRQDGDVGCPETIAXXXXXXXXX 408
+ +LE YV QIC++WE L W + K + S R R + IA
Sbjct: 585 HRDLEIVYVGQICLSWEILCWQHEKIKELKKYDSPRPRRYN-------LIAGEFQLFQVL 637
Query: 409 XXRYVENEPYEHGRRPEIYARMRHMAPKLLLVP-------------EYRESDDDHKENSL 455
R++E+EP+ R + Y + R + LL VP ++ E D
Sbjct: 638 MQRFLEDEPFRQDHRVQNYVKNRCVIRNLLQVPIIKDDSTKDKKKIKWGEEDG------- 690
Query: 456 KISSGSFLVIMEDGIRTFMNFLKADKE 482
I+S I++ ++ F F++ADK+
Sbjct: 691 -IASERLEQIIKKSMQVFWKFVRADKD 716