Miyakogusa Predicted Gene

Lj2g3v0720150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0720150.1 tr|Q9LS60|Q9LS60_ARATH Gb|AAF26481.1
OS=Arabidopsis thaliana GN=At3g18300 PE=2
SV=1,34.15,5e-19,seg,NULL,CUFF.35266.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g083930.1 | hypothetical protein | HC | chr6:31329301-3132...   183   1e-46
Medtr8g104290.1 | hypothetical protein | HC | chr8:43919084-4391...   147   1e-35
Medtr6g018690.1 | hypothetical protein | HC | chr6:7196560-71982...    79   3e-15
Medtr1g110410.1 | hypothetical protein | HC | chr1:49817659-4981...    70   2e-12
Medtr7g082180.1 | hypothetical protein | HC | chr7:31482984-3148...    59   6e-09

>Medtr6g083930.1 | hypothetical protein | HC |
           chr6:31329301-31327995 | 20130731
          Length = 242

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/247 (47%), Positives = 135/247 (54%), Gaps = 15/247 (6%)

Query: 3   MCSETS-PPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADE 61
           MCSETS PPRLSFSH+LSE Q   L +DV   +TLLLDSN                 ADE
Sbjct: 1   MCSETSTPPRLSFSHNLSEFQ---LQKDVTCIETLLLDSNSDFEFNTSNILEFESSSADE 57

Query: 62  LFSNGVILPTQ---IQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMIDVS 118
           LFSNG ILP     ++ N T  P                    + +   ET+REL+ +VS
Sbjct: 58  LFSNGKILPKHTPFVKSNHTKFPPRPSASNVDKMKKESNPRWILAQSGTETVRELL-NVS 116

Query: 119 ANGERK--KSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXXXXXX 176
            N E+K    SFWGFSRSKSLNC DTKK +   LP L RSNS GS               
Sbjct: 117 TNNEKKHHSKSFWGFSRSKSLNC-DTKKNLSFSLPPLYRSNSTGSAKKMSSNKQTSSATT 175

Query: 177 XXXXXXXXX----XXXXXGKTYGGSFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLRVG 232
                             GK+YGGS+GNGHW+SPVLNVPTPCVSKGS+N F  GSFL +G
Sbjct: 176 KSSSWSNINLYPMQKSNSGKSYGGSYGNGHWISPVLNVPTPCVSKGSANFFRFGSFLSIG 235

Query: 233 KVKRNKK 239
           KVK+NKK
Sbjct: 236 KVKKNKK 242


>Medtr8g104290.1 | hypothetical protein | HC |
           chr8:43919084-43917886 | 20130731
          Length = 224

 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/237 (43%), Positives = 117/237 (49%), Gaps = 17/237 (7%)

Query: 3   MCSETSPPRLSFSHDLSELQVLPLIQDV-HFRDTLLLDSNPXXXXXXXXXXXXXXXXADE 61
           MCS+TS PR SFS+D+S     P+  DV   RDTLLL+SN                 ADE
Sbjct: 1   MCSQTSSPRFSFSNDVS-----PMKHDVVSCRDTLLLESNTDFEFITSKNIEFGTSSADE 55

Query: 62  LFSNGVILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELMIDVSANG 121
           LFSNGVILP QI D K  T  +                    K KKE  +E+        
Sbjct: 56  LFSNGVILPLQIHDKKNNTASYKEQPRYMNLPPRPFST----KTKKEINKEVQ-----ET 106

Query: 122 ERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMGSVAXXXXXXXXXXXXXXXXXX 181
             + SSF GF +SKSLNCD T K  VC  P LSRSNS GS                    
Sbjct: 107 NTRSSSFIGFKKSKSLNCD-TNKNFVCFSPPLSRSNSTGSAPNLKRTSSNRQQSSLSSSC 165

Query: 182 XXXXXXXXXGKTYGG-SFGNGHWVSPVLNVPTPCVSKGSSNLFGLGSFLRVGKVKRN 237
                     K+  G S+GNG   SPVLNVPTPC SKGS +LFG GSFLRVGK K+N
Sbjct: 166 STLNNLYPVQKSCSGKSYGNGLRFSPVLNVPTPCFSKGSLSLFGFGSFLRVGKAKKN 222


>Medtr6g018690.1 | hypothetical protein | HC | chr6:7196560-7198296
           | 20130731
          Length = 251

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 103/255 (40%), Gaps = 31/255 (12%)

Query: 7   TSPPRLSFSHDLSELQVLPLIQDVHFRDTLLLDSNPXXXXXXXXXXXXXXXXADELFSNG 66
           T  PR+SFSHD S+  V+P+ +     ++  ++S+                 ADELFS+G
Sbjct: 6   TMSPRISFSHDFSQQGVIPIEKHPLRSNSSNMNSSIDFDFCVNETSELESSSADELFSHG 65

Query: 67  VILPTQIQDNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKET-------IREL--MIDV 117
           +ILPT+++  K   P     ++              +  K  +       ++EL  + +V
Sbjct: 66  IILPTELKKKKINVPLKQPTIQPTPPQNFALPPLYANGSKNSSKKMITKDVKELNNIDEV 125

Query: 118 SANGERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLLSRSNSMG---SVAXXXXXXXXXXX 174
                    SFWGF RS S  C       +CPLPLLS+SNS G   SV            
Sbjct: 126 DEKHSSNSKSFWGFKRSSS--CGSGYGRSLCPLPLLSKSNSTGSSTSVKRMLSKEGSNVK 183

Query: 175 XXXXXXXXXXXXXXXXG----------KTYGGSFGNGHWVSPVLNVPTPCVSKGSSNLFG 224
                           G          + +GG++ N   VSPVLNVP        SNLFG
Sbjct: 184 QNSKKNSSITRSSNSFGSNNHQKAPIKRCHGGAYANNVRVSPVLNVPY-------SNLFG 236

Query: 225 LGSFLRVGKVKRNKK 239
            GS     + K  KK
Sbjct: 237 FGSIFSNNRDKSKKK 251


>Medtr1g110410.1 | hypothetical protein | HC |
           chr1:49817659-49816565 | 20130731
          Length = 267

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 100/258 (38%), Gaps = 36/258 (13%)

Query: 3   MCSET-SP---PRLSFSHDLSELQVLPLIQDVHFRDTL-LLDSNPXXXXXXXXXXXXXXX 57
           +CSET SP   PR+SFSHDL        ++D+H R  L LLDS                 
Sbjct: 5   VCSETNSPGFSPRISFSHDLKNSNGSIPVEDLHLRSDLHLLDSTSDFVFSITNCFSQQFS 64

Query: 58  XADELFSNGVILPTQIQ---DNKTTTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRELM 114
            ADELFS+G I+P +I+    N    P     ++                V K+ ++E +
Sbjct: 65  SADELFSDGKIVPMEIKKVISNGIIVP-----MKKNSSANEFFEPLQKTTVMKKRLKEFL 119

Query: 115 IDVSANGERK---KSSFWGFSRSKSLNCDDTKK-IMVCPLPLLSRSNSMGSVAXXXXXXX 170
            D +   E K      FW F RS SLN D  ++  ++  L  LSRS+S GS         
Sbjct: 120 SDETDVEEEKPLLSKHFWQFKRSSSLNFDTARQNRLIRSLQFLSRSHSTGSAPNPKQTEL 179

Query: 171 XXXXXXXXXXXXXXXXXXXXGKT----------YGG---------SFGNGHWVSPVLNVP 211
                                 +          Y           S  NG  +SPVLN+P
Sbjct: 180 QKERQKQRLQKQSSVSSSRRSSSSSSTSSTYYFYNSSNKSSLRKCSSSNGVRISPVLNLP 239

Query: 212 TPCVSKGSSNLFGLGSFL 229
              + K ++N FG GS  
Sbjct: 240 QAYIPKVTANFFGFGSLF 257


>Medtr7g082180.1 | hypothetical protein | HC |
           chr7:31482984-31485168 | 20130731
          Length = 255

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 94/252 (37%), Gaps = 37/252 (14%)

Query: 1   MLMCSETSPPRLSFSHDLSELQVLPLIQD-VHFRDTLLLDSNPXXXXXXXXXXXXXXXXA 59
           + +CSE   PR+SFSHD S+   +P+ Q  +  + + L  S                  A
Sbjct: 3   LELCSENCGPRISFSHDFSQSDFIPVEQHPIRSKSSGLNSSIDFDFNVSESLNLEESSSA 62

Query: 60  DELFSNGVILPTQIQDNKT------TTPKHSHHVEXXXXXXXXXXXXXVDKVKKETIRE- 112
            ELFS+G ILP +I+  +       TT   S +                  ++KE+ +E 
Sbjct: 63  AELFSDGRILPAEIKKKQVPLKQSLTTQSPSPNPSLNPSYSTCNNESNGKNLRKESTKES 122

Query: 113 --LMIDVSANGERKKSSFWGFSRSKSLNCDDTKKIMVCPLPLL--------------SRS 156
             L  +V         SFW F RS S  C       +CPLPLL              ++ 
Sbjct: 123 KYLNDEVCEKQSSNSKSFWSFKRSSS--CGSGYGRSLCPLPLLSRSNSTGSSTSSVNNKR 180

Query: 157 NSM---GSVAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKTYGGSFGNGHWVSPVLNVPTP 213
           NS+   G                               K+Y GS G+   V+PVLNVP  
Sbjct: 181 NSLSKEGISTVKSNSQKLSSTRLSNSSGSNSYLKPPLNKSY-GSHGHSVRVNPVLNVPP- 238

Query: 214 CVSKGSSNLFGL 225
                 +NLFGL
Sbjct: 239 ------ANLFGL 244