Miyakogusa Predicted Gene
- Lj2g3v0719120.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0719120.1 Non Characterized Hit- tr|I1KIY9|I1KIY9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23850 PE,86.97,0,Ring
finger,Zinc finger, RING-type; no description,NULL; no
description,Zinc finger, RING/FYVE/PHD-t,CUFF.35257.1
(931 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g083900.1 | CHY zinc finger protein | HC | chr6:31304656-3... 1619 0.0
Medtr8g104410.1 | CHY zinc finger protein | HC | chr8:43980913-4... 1527 0.0
Medtr8g104410.2 | CHY zinc finger protein | HC | chr8:43986906-4... 1522 0.0
Medtr4g107440.1 | zinc ion-binding protein | HC | chr4:44453747-... 413 e-115
Medtr1g047740.6 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr1g047740.3 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr1g047740.2 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr1g047740.5 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr1g047740.1 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr1g047740.4 | CHY and CTCHY and RING-type zinc finger protei... 202 1e-51
Medtr2g020040.1 | CHY and CTCHY and RING-type zinc finger protei... 196 1e-49
Medtr7g102990.1 | CHY and CTCHY and RING-type zinc finger protei... 193 7e-49
Medtr4g057310.1 | RING finger and CHY zinc finger protein | HC |... 188 2e-47
Medtr3g108240.3 | CHY and CTCHY and RING-type zinc finger protei... 182 1e-45
Medtr3g108240.1 | CHY and CTCHY and RING-type zinc finger protei... 182 1e-45
Medtr3g108240.2 | CHY and CTCHY and RING-type zinc finger protei... 179 8e-45
Medtr1g010150.1 | CHY and CTCHY and RING-type zinc finger protei... 146 8e-35
Medtr4g057310.2 | RING finger and CHY zinc finger protein | HC |... 145 2e-34
Medtr7g102990.2 | CHY and CTCHY and RING-type zinc finger protei... 132 1e-30
Medtr2g007340.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 9e-06
>Medtr6g083900.1 | CHY zinc finger protein | HC |
chr6:31304656-31314509 | 20130731
Length = 1234
Score = 1619 bits (4192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 773/938 (82%), Positives = 829/938 (88%), Gaps = 9/938 (0%)
Query: 1 MGTHPIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAE 60
MG+HPIDEILLWHNAIKKELNEIAAETR+IQ SGD+TNLSAFNERLQFIAEVFIFHSIAE
Sbjct: 299 MGSHPIDEILLWHNAIKKELNEIAAETRKIQHSGDYTNLSAFNERLQFIAEVFIFHSIAE 358
Query: 61 DKVIFPAVDGELSFFQEHAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCSQADHIM 120
DKVIFPAVDG+ SFFQEHAEEESQFNDFRSLIE I SE AT++SE E YS LCSQADHIM
Sbjct: 359 DKVIFPAVDGDFSFFQEHAEEESQFNDFRSLIERIVSEEATSSSEVELYSMLCSQADHIM 418
Query: 121 ETIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSLTEDEAE 180
ETIQ+HF NEEVQVLPLARKHFS ++QRELVY+SLC+MPLKLIERVLPW VGSLTEDEAE
Sbjct: 419 ETIQKHFHNEEVQVLPLARKHFSLQRQRELVYESLCMMPLKLIERVLPWFVGSLTEDEAE 478
Query: 181 MFLKNMQLAAPATDSALVTLFCGWACKARKDGMCLSSSASGCCPAKN------TCPSALS 234
+FLKN+Q AAPA DSALVTLF GWACKARK+G CLSSSAS CPAK C SALS
Sbjct: 479 IFLKNIQSAAPAMDSALVTLFSGWACKARKNGRCLSSSASRFCPAKKIVRSSCACASALS 538
Query: 235 GRDCSVLAESNGTQRPVKRNILELQKNEDVLKTPEIESIQKICCSAQPCCVPAXXXXXXX 294
G+DCSVLAES+GTQR VKR+ILELQKN DV KTPE E K CC + CCVPA
Sbjct: 539 GKDCSVLAESDGTQRSVKRSILELQKNGDVSKTPENEPALKPCCGGRSCCVPALGVNSNN 598
Query: 295 XXXXXXXTAKSLRSLSFTSSAPSLNSSLFVWETDSSLCAVGSAERPIDTIFKFHIAIRKD 354
AKSLR+ FTSSAPS+NSSLF+WETDSS C VGSAERPIDTIFKFH AIR D
Sbjct: 599 LGLSSLSAAKSLRN--FTSSAPSINSSLFIWETDSSSCDVGSAERPIDTIFKFHKAIRID 656
Query: 355 LEYLDVESGKLCDGDETIIQQFTGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHS 414
LEYLDVESGKLCDGDE I+QFTGRFRLLWGLYRAHSNAED+IVFPALESKE LHNVSHS
Sbjct: 657 LEYLDVESGKLCDGDEATIRQFTGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHS 716
Query: 415 YMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFSKSNFVISDANDSDNIRKYNEL 474
Y LDH+ EEKLFEDIS VLSELSVLHE +Q H+S+D S+ N ISDANDSD+IRKYNEL
Sbjct: 717 YTLDHKAEEKLFEDISCVLSELSVLHEALQSTHLSEDLSEPNSGISDANDSDDIRKYNEL 776
Query: 475 ATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLP 534
ATKLQGMCKSIRVTLDQHI+REELELWPLFGKHF+VEEQDKIVGRIIGTTGAEVLQSMLP
Sbjct: 777 ATKLQGMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLP 836
Query: 535 WVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLIESPAXXXXXXXXXXXXXQRGVDYQ 594
WVTSALTQDEQN+MMDTWKQATKNTMFNEWLNE LIESP QRG +YQ
Sbjct: 837 WVTSALTQDEQNQMMDTWKQATKNTMFNEWLNESLIESPGSTSQTETSEHSTSQRGAEYQ 896
Query: 595 ESLDLNDQKFKPGWKDIFRMNQNELESEIRKVYRDTTLDPRRKDYLVQNLMTSRWIAAQQ 654
ESL+LNDQ FKPGWKDIFRMN+NE+ SEIRKVYRD+TLDPRRK YLVQNLMTSRWIAAQQ
Sbjct: 897 ESLNLNDQMFKPGWKDIFRMNENEIVSEIRKVYRDSTLDPRRKAYLVQNLMTSRWIAAQQ 956
Query: 655 KLPKAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHD-NA 713
KLP + SGESSNKQIEGC+PSFRDPEK++FGCEHYKRNCK+RAACC KLFTCRFCHD N+
Sbjct: 957 KLPNSQSGESSNKQIEGCAPSFRDPEKKVFGCEHYKRNCKVRAACCEKLFTCRFCHDNNS 1016
Query: 714 SDHSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDERSVYHCPF 773
+DHSMDRK+T EMMCM CLT+QPVGP+CM+PSCNGLSMAKYYCNICKFFDDER+VYHCPF
Sbjct: 1017 TDHSMDRKATTEMMCMACLTIQPVGPICMTPSCNGLSMAKYYCNICKFFDDERNVYHCPF 1076
Query: 774 CNICRVGQGLGIDYFHCMKCNCCLGLKSASHKCLEKGLEMNCPICCDDLFTSSATVRALP 833
CNICRVGQGLGIDYFHCMKCNCC+G+KS SHKC EKGLEMNCPICCDDLFTSSATVRAL
Sbjct: 1077 CNICRVGQGLGIDYFHCMKCNCCVGIKSVSHKCREKGLEMNCPICCDDLFTSSATVRALV 1136
Query: 834 CGHYMHSSCFQAYTVGHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCN 893
CGHYMHSSCFQAY HYTCPICSKSLGDMAVYFGMLDALLAAE LPEEY+DR QDILC+
Sbjct: 1137 CGHYMHSSCFQAYACSHYTCPICSKSLGDMAVYFGMLDALLAAEQLPEEYKDRTQDILCH 1196
Query: 894 DCDKKSASRFHWLYHKCRFCGSYNTRVIKTEATNPSCP 931
DCD+K S+FHWLYHKC FCGSYNTRVIK+E TN SCP
Sbjct: 1197 DCDRKGTSQFHWLYHKCGFCGSYNTRVIKSETTNSSCP 1234
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 33/212 (15%)
Query: 337 AERPIDTIFKFHIAIRKDLEYLDVESGKLCDGDETIIQQFTGRFRLLWGLYRAHSNAEDE 396
E PI F AI +L+ L + G+ I + R+ L +YR HSNAEDE
Sbjct: 42 TESPILIFSFFQKAIGNELDALHRLALDFATGNCFDIGPLSERYHFLRSMYRHHSNAEDE 101
Query: 397 IVFPALESKEALHNVSHSYMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFSKSN 456
++FPAL+ + + NV+ +Y L+H+ E LF+ + +L+
Sbjct: 102 VIFPALDRR--VKNVAQTYSLEHKGESNLFDHLFELLN---------------------- 137
Query: 457 FVISDANDSDNIRKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKI 516
S ++ ++ R+ +L +++ ++ QH+ +E+ +++PL + FSVEEQ +
Sbjct: 138 ---SSGDNDESFRR------ELASCTGALQTSVSQHMAKEQQQVFPLLIEKFSVEEQASL 188
Query: 517 VGRIIGTTGAEVLQSMLPWVTSALTQDEQNKM 548
V + + + ++ LPW++++++ DE +
Sbjct: 189 VWQFLCSIPVNMMAEFLPWLSTSISPDESQDL 220
Score = 87.0 bits (214), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 5 PIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAEDKVI 64
PI + AI EL+ + ++G+ ++ +ER F+ ++ HS AED+VI
Sbjct: 45 PILIFSFFQKAIGNELDALHRLALDF-ATGNCFDIGPLSERYHFLRSMYRHHSNAEDEVI 103
Query: 65 FPAVDGELSFFQE--HAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCSQADHIMET 122
FPA+D + + E + + N F L E + S G S F +L S + +
Sbjct: 104 FPALDRRVKNVAQTYSLEHKGESNLFDHLFELLNSSGDNDES---FRRELASCTGALQTS 160
Query: 123 IQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSLTEDEAEMF 182
+ +H E+ QV PL + FS +Q LV+Q LC +P+ ++ LPWL S++ DE++
Sbjct: 161 VSQHMAKEQQQVFPLLIEKFSVEEQASLVWQFLCSIPVNMMAEFLPWLSTSISPDESQDL 220
Query: 183 LKNMQLAAP 191
K + P
Sbjct: 221 RKCLSKIVP 229
>Medtr8g104410.1 | CHY zinc finger protein | HC |
chr8:43980913-43994829 | 20130731
Length = 1243
Score = 1527 bits (3953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 754/943 (79%), Positives = 812/943 (86%), Gaps = 16/943 (1%)
Query: 2 GTHPIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAED 61
GTHPIDEILLWHNAIKKEL+EIA ETRRIQ SGDFT++SAFN+RLQFIA+V IFHSIAED
Sbjct: 302 GTHPIDEILLWHNAIKKELSEIAVETRRIQHSGDFTDISAFNDRLQFIADVCIFHSIAED 361
Query: 62 KVIFPAVDGELSFFQEHAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCSQADHIME 121
KVIFPAVDGELSFFQEHAEEESQFNDFR LIESI SEGA++ SE EFYSKLCS ADHIME
Sbjct: 362 KVIFPAVDGELSFFQEHAEEESQFNDFRCLIESILSEGASSNSEVEFYSKLCSHADHIME 421
Query: 122 TIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSLTEDEAEM 181
TIQRHF NEEVQVLPLARKHFSFR+Q EL+YQSLC+MPLKLIERVLPWLVGSL +EA+M
Sbjct: 422 TIQRHFHNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLVGSLKVEEAKM 481
Query: 182 FLKNMQLAAPATDSALVTLFCGWACKARKDGMCLSSSASGCCPAKNTCP----------- 230
FL+NMQ AAPATDSALVTLF GWACKAR +GMCLSS S CCPA+
Sbjct: 482 FLRNMQFAAPATDSALVTLFSGWACKARNEGMCLSSGTSDCCPAQRLSDIEENIDRPSSV 541
Query: 231 --SALSGRDCSVLAESNGTQRPVKRNILELQKNEDVLKTPEIESIQKICCSAQPCCVPAX 288
SA S R CSV+ ES+G +RPVKRN +L N DV + E ESIQK CCS + CCVP
Sbjct: 542 CSSASSRRHCSVILESDGNKRPVKRNTFKLN-NGDVTEISETESIQKQCCSPRSCCVPGL 600
Query: 289 XXXXXXXXXXXXXTAKSLRSLSFTSSAPSLNSSLFVWETDSSLCAVGSAERPIDTIFKFH 348
TAKSLRSLSF+SSAPSLNSSLF+WET+SS C VGSAERPIDTIFKFH
Sbjct: 601 GVNSNNLRLSSISTAKSLRSLSFSSSAPSLNSSLFIWETESSSCDVGSAERPIDTIFKFH 660
Query: 349 IAIRKDLEYLDVESGKLCDGDETIIQQFTGRFRLLWGLYRAHSNAEDEIVFPALESKEAL 408
AIRKDLEYLDVESGKL D DETII+QF+GRFRLLWGLYRAHSNAED+IVFPALESKEAL
Sbjct: 661 KAIRKDLEYLDVESGKLSDSDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEAL 720
Query: 409 HNVSHSYMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFSKSNFVISDANDSDNI 468
HNVSHSYMLDH+QEE+LFEDIS VLSE SVLHE +Q HM+D+ S SNF SD ND D++
Sbjct: 721 HNVSHSYMLDHKQEEQLFEDISFVLSEFSVLHEALQLTHMADNLSDSNFGTSDVNDGDDV 780
Query: 469 RKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEV 528
+KYNELATKLQGMCKSIRVTLDQHI+REE ELWPLFGKHFSVEEQDKIVGRIIGTTGAEV
Sbjct: 781 KKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGKHFSVEEQDKIVGRIIGTTGAEV 840
Query: 529 LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLIESPAXXXXXXXXXXXXXQ 588
LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNEC ESP
Sbjct: 841 LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPESISQTETSHCSTSH 900
Query: 589 RGVDYQESLDLNDQKFKPGWKDIFRMNQNELESEIRKVYRDTTLDPRRKDYLVQNLMTSR 648
RG +YQE LD NDQ FKPGWKDIFRMNQNELESEIRKVYRD+TLDPRRK YLVQNL+TSR
Sbjct: 901 RGSEYQECLDYNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSR 960
Query: 649 WIAAQQKLPKAVS-GESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCR 707
WIAAQQK PK S G S+ +IEG SPSFRDP + +FGCEHYKRNCK+RAACCGKLFTCR
Sbjct: 961 WIAAQQKSPKPPSEGSSNGVKIEGHSPSFRDPGELVFGCEHYKRNCKLRAACCGKLFTCR 1020
Query: 708 FCHDNASDHSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDERS 767
FCHDN SDHSMDRK+T EMMCM+CL +QP+GP+CM+PSCN LSMAKYYC+ICKFFDDER+
Sbjct: 1021 FCHDNVSDHSMDRKATSEMMCMRCLNIQPIGPICMTPSCNALSMAKYYCSICKFFDDERN 1080
Query: 768 VYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLKSASHKCLEKGLEMNCPICCDDLFTSSA 827
VYHCPFCN+CRVGQGLGIDYFHCMKCNCCLG+KS SHKCLEKGLEMNCPICCDDLFTSSA
Sbjct: 1081 VYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSLSHKCLEKGLEMNCPICCDDLFTSSA 1140
Query: 828 TVRALPCGHYMHSSCFQAYTVGHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRH 887
TVRALPCGHYMHS+CFQAYT HYTCPICSKSLGDMAVYFGMLDALLAAE LPEEYRDRH
Sbjct: 1141 TVRALPCGHYMHSACFQAYTRSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRH 1200
Query: 888 QDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIKTEATNPSC 930
QDILCNDCD+K SRFHWLYHKC CGSYNTR+IK E T+ SC
Sbjct: 1201 QDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRLIKRE-THSSC 1242
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 33/213 (15%)
Query: 338 ERPIDTIFKFHIAIRKDLEYLDVESGKLCDGDETIIQQFTGRFRLLWGLYRAHSNAEDEI 397
+ PI FH AIR +L+ L + G+ + I+ R+ L +YR HSNAEDE+
Sbjct: 38 DSPILIFLFFHKAIRNELDVLHRLAMSFATGNRSDIRPLFDRYHFLNSIYRHHSNAEDEV 97
Query: 398 VFPALESKEALHNVSHSYMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFSKSNF 457
+FPAL+ + + NV+ +Y L+H+ E LF+ + +L+
Sbjct: 98 IFPALDRR--VKNVAQTYSLEHKGESNLFDHLFELLNS---------------------- 133
Query: 458 VISDANDSDNIRKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKIV 517
S ND R+ LQ ++ QH+ +EE +++PL + FS+EEQ +V
Sbjct: 134 --STKNDEGFPRELASCTGALQ-------TSVSQHLAKEEEQVFPLLIEKFSLEEQASLV 184
Query: 518 GRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMD 550
+ + + ++ LPW++++++ DE + D
Sbjct: 185 WQFLCSIPVNMIAEFLPWLSTSISADESQDLRD 217
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 12/181 (6%)
Query: 5 PIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAEDKVI 64
PI L +H AI+ EL+ + ++G+ +++ +R F+ ++ HS AED+VI
Sbjct: 40 PILIFLFFHKAIRNELDVLHRLAMSF-ATGNRSDIRPLFDRYHFLNSIYRHHSNAEDEVI 98
Query: 65 FPAVDGEL-----SFFQEHAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCSQADHI 119
FPA+D + ++ EH E + F+ L+ S +T ++ F +L S +
Sbjct: 99 FPALDRRVKNVAQTYSLEHKGESNLFDHLFELLNS------STKNDEGFPRELASCTGAL 152
Query: 120 METIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSLTEDEA 179
++ +H EE QV PL + FS +Q LV+Q LC +P+ +I LPWL S++ DE+
Sbjct: 153 QTSVSQHLAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMIAEFLPWLSTSISADES 212
Query: 180 E 180
+
Sbjct: 213 Q 213
>Medtr8g104410.2 | CHY zinc finger protein | HC |
chr8:43986906-43994829 | 20130731
Length = 1007
Score = 1522 bits (3940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/943 (80%), Positives = 813/943 (86%), Gaps = 16/943 (1%)
Query: 2 GTHPIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAED 61
GTHPIDEILLWHNAIKKEL+EIA ETRRIQ SGDFT++SAFN+RLQFIA+V IFHSIAED
Sbjct: 66 GTHPIDEILLWHNAIKKELSEIAVETRRIQHSGDFTDISAFNDRLQFIADVCIFHSIAED 125
Query: 62 KVIFPAVDGELSFFQEHAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCSQADHIME 121
KVIFPAVDGELSFFQEHAEEESQFNDFR LIESI SEGA++ SE EFYSKLCS ADHIME
Sbjct: 126 KVIFPAVDGELSFFQEHAEEESQFNDFRCLIESILSEGASSNSEVEFYSKLCSHADHIME 185
Query: 122 TIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSLTEDEAEM 181
TIQRHF NEEVQVLPLARKHFSFR+Q EL+YQSLC+MPLKLIERVLPWLVGSL +EA+M
Sbjct: 186 TIQRHFHNEEVQVLPLARKHFSFRRQCELLYQSLCMMPLKLIERVLPWLVGSLKVEEAKM 245
Query: 182 FLKNMQLAAPATDSALVTLFCGWACKARKDGMCLSSSASGCCPAKN-------------T 228
FL+NMQ AAPATDSALVTLF GWACKAR +GMCLSS S CCPA+
Sbjct: 246 FLRNMQFAAPATDSALVTLFSGWACKARNEGMCLSSGTSDCCPAQRLSDIEENIDRPSSV 305
Query: 229 CPSALSGRDCSVLAESNGTQRPVKRNILELQKNEDVLKTPEIESIQKICCSAQPCCVPAX 288
C SA S R CSV+ ES+G +RPVKRN +L N DV + E ESIQK CCS + CCVP
Sbjct: 306 CSSASSRRHCSVILESDGNKRPVKRNTFKLN-NGDVTEISETESIQKQCCSPRSCCVPGL 364
Query: 289 XXXXXXXXXXXXXTAKSLRSLSFTSSAPSLNSSLFVWETDSSLCAVGSAERPIDTIFKFH 348
TAKSLRSLSF+SSAPSLNSSLF+WET+SS C VGSAERPIDTIFKFH
Sbjct: 365 GVNSNNLRLSSISTAKSLRSLSFSSSAPSLNSSLFIWETESSSCDVGSAERPIDTIFKFH 424
Query: 349 IAIRKDLEYLDVESGKLCDGDETIIQQFTGRFRLLWGLYRAHSNAEDEIVFPALESKEAL 408
AIRKDLEYLDVESGKL D DETII+QF+GRFRLLWGLYRAHSNAED+IVFPALESKEAL
Sbjct: 425 KAIRKDLEYLDVESGKLSDSDETIIRQFSGRFRLLWGLYRAHSNAEDDIVFPALESKEAL 484
Query: 409 HNVSHSYMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFSKSNFVISDANDSDNI 468
HNVSHSYMLDH+QEE+LFEDIS VLSE SVLHE +Q HM+D+ S SNF SD ND D++
Sbjct: 485 HNVSHSYMLDHKQEEQLFEDISFVLSEFSVLHEALQLTHMADNLSDSNFGTSDVNDGDDV 544
Query: 469 RKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEV 528
+KYNELATKLQGMCKSIRVTLDQHI+REE ELWPLFGKHFSVEEQDKIVGRIIGTTGAEV
Sbjct: 545 KKYNELATKLQGMCKSIRVTLDQHIFREERELWPLFGKHFSVEEQDKIVGRIIGTTGAEV 604
Query: 529 LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECLIESPAXXXXXXXXXXXXXQ 588
LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNEC ESP
Sbjct: 605 LQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFNEWLNECWKESPESISQTETSHCSTSH 664
Query: 589 RGVDYQESLDLNDQKFKPGWKDIFRMNQNELESEIRKVYRDTTLDPRRKDYLVQNLMTSR 648
RG +YQE LD NDQ FKPGWKDIFRMNQNELESEIRKVYRD+TLDPRRK YLVQNL+TSR
Sbjct: 665 RGSEYQECLDYNDQMFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKAYLVQNLLTSR 724
Query: 649 WIAAQQKLPKAVS-GESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCR 707
WIAAQQK PK S G S+ +IEG SPSFRDP + +FGCEHYKRNCK+RAACCGKLFTCR
Sbjct: 725 WIAAQQKSPKPPSEGSSNGVKIEGHSPSFRDPGELVFGCEHYKRNCKLRAACCGKLFTCR 784
Query: 708 FCHDNASDHSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDERS 767
FCHDN SDHSMDRK+T EMMCM+CL +QP+GP+CM+PSCN LSMAKYYC+ICKFFDDER+
Sbjct: 785 FCHDNVSDHSMDRKATSEMMCMRCLNIQPIGPICMTPSCNALSMAKYYCSICKFFDDERN 844
Query: 768 VYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLKSASHKCLEKGLEMNCPICCDDLFTSSA 827
VYHCPFCN+CRVGQGLGIDYFHCMKCNCCLG+KS SHKCLEKGLEMNCPICCDDLFTSSA
Sbjct: 845 VYHCPFCNLCRVGQGLGIDYFHCMKCNCCLGIKSLSHKCLEKGLEMNCPICCDDLFTSSA 904
Query: 828 TVRALPCGHYMHSSCFQAYTVGHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRH 887
TVRALPCGHYMHS+CFQAYT HYTCPICSKSLGDMAVYFGMLDALLAAE LPEEYRDRH
Sbjct: 905 TVRALPCGHYMHSACFQAYTRSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRH 964
Query: 888 QDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIKTEATNPSC 930
QDILCNDCD+K SRFHWLYHKC CGSYNTR+IK E T+ SC
Sbjct: 965 QDILCNDCDRKGTSRFHWLYHKCGSCGSYNTRLIKRE-THSSC 1006
>Medtr4g107440.1 | zinc ion-binding protein | HC |
chr4:44453747-44465290 | 20130731
Length = 1271
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 184/318 (57%), Positives = 235/318 (73%), Gaps = 1/318 (0%)
Query: 605 KPGWKD-IFRMNQNELESEIRKVYRDTTLDPRRKDYLVQNLMTSRWIAAQQKLPKAVSGE 663
K G D + +++Q++LE IR+V RD+ LDP+ K Y++Q+L+TSRWI +Q+ + +
Sbjct: 954 KSGHYDRLLKLSQDDLEKVIRRVSRDSCLDPQEKSYIIQSLLTSRWIISQKISSMEANIK 1013
Query: 664 SSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASDHSMDRKST 723
S ++ G PS++DP +QI+GC+HYKRNCK+ A CC +L C CHD ASDH +DRKS
Sbjct: 1014 SDGQEFPGKHPSYKDPHEQIYGCKHYKRNCKLLAPCCNQLHACIHCHDEASDHLIDRKSI 1073
Query: 724 MEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDERSVYHCPFCNICRVGQGL 783
+MMCM+CL +QP+ C S SC LSMAKYYC ICK F+DER +YHCP+CN+CRVG+GL
Sbjct: 1074 TKMMCMKCLMIQPINSTCSSVSCRNLSMAKYYCRICKIFEDEREIYHCPYCNLCRVGKGL 1133
Query: 784 GIDYFHCMKCNCCLGLKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCF 843
G+DYFHCM CN C+ H C EK LE NCPIC + +FTS + V+ALPCGH MHS+CF
Sbjct: 1134 GVDYFHCMNCNACMSRSLMIHTCREKSLEENCPICHEYIFTSCSPVKALPCGHAMHSTCF 1193
Query: 844 QAYTVGHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRF 903
+ YT YTCPICSKSLGDM V F MLDALLA + + +E+ + Q ILCNDC+KK A+ F
Sbjct: 1194 KEYTCFSYTCPICSKSLGDMQVLFRMLDALLAEQKMSDEFSGQTQVILCNDCEKKGAAPF 1253
Query: 904 HWLYHKCRFCGSYNTRVI 921
HWLYHKC CGSYNTRVI
Sbjct: 1254 HWLYHKCSCCGSYNTRVI 1271
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 156/257 (60%), Gaps = 14/257 (5%)
Query: 311 FTSSAPSLNSSLFVWETDSSLCAVGSAERPIDTIFKFHIAIRKDLEYLDVESGKLCDGDE 370
F +A LN + +SS + + +PID IF FH AI+KDL+YL S +L +G +
Sbjct: 591 FPDTAMKLNQHPRLHAANSSSVSFLNDPKPIDLIFFFHKAIKKDLDYLVHGSAQL-EGHD 649
Query: 371 TIIQQFTGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHSYMLDHEQEEKLFEDIS 430
++ F RF L++ L++ HS+AE+EIVFPALE+ L N+SH+Y DH+ E + F +S
Sbjct: 650 DLVTDFQKRFNLIYFLHQIHSDAEEEIVFPALEAIGQLKNISHAYTFDHKHEVEHFGKMS 709
Query: 431 HVLSELSVLHEDMQRAHMSDDFSKSNFVISDANDSDNIRKYNELATKLQGMCKSIRVTLD 490
+L ++S LH + S D +R+++ L KLQ CKS+ L
Sbjct: 710 RILDKISELHLLVSTTD------------SKIRDKRVLRRHH-LIRKLQERCKSMHKLLS 756
Query: 491 QHIYREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMD 550
HI REE+E+WP+ + FS EQ KI+G I+G AE+LQ M+PW+ ++LTQ+EQ+ +M
Sbjct: 757 DHINREEIEIWPIIREFFSNREQGKIIGCILGRISAEILQDMIPWLMASLTQEEQHVLMF 816
Query: 551 TWKQATKNTMFNEWLNE 567
W ATKNTMF+EWL E
Sbjct: 817 LWSMATKNTMFDEWLGE 833
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
Query: 2 GTHPIDEILLWHNAIKKELNEIAAETRRIQSSGD--FTNLSAFNERLQFIAEVFIFHSIA 59
G + I + LWHNAIKK+L EI E I++SG NL + +L+F+A+V I +S A
Sbjct: 301 GVNQIKVLHLWHNAIKKDLKEILQELYLIRNSGSGCSQNLDSILIQLKFLADVLIIYSNA 360
Query: 60 EDKVIFPAVDGE----LSFFQEHAEEESQFNDFRSLI-ESIQSEGATTTSEAEFYSKLCS 114
K P + LS EH ES D + L+ + +SE T +F KLC
Sbjct: 361 LKKFFHPVLKKHAHKRLSKSTEHFLGESHIEDLQQLLFYNSESEMPLT----KFVEKLCG 416
Query: 115 QADHIMETIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSL 174
+ + + T+ + F +E++V P+ RK+ Q L+ S+ +MPL L++ V+ W L
Sbjct: 417 KLELFVSTVNKQFSFQEIEVFPIFRKNCRNGMQVRLLSLSMLMMPLGLLKCVITWFSVHL 476
Query: 175 TEDEAEMFLKNMQLAAPATDSALVTLFCGW 204
+E E+ L ++ + A L W
Sbjct: 477 SEKESRTILYCIKEGNNSVSKAFAPLLHEW 506
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 120/247 (48%), Gaps = 30/247 (12%)
Query: 5 PIDEILLWHNAIKKELNEIAAETRRIQSSGDFTNLSAFNERLQFIAEVFIFHSIAEDKVI 64
PID I +H AIKK+L+ + + +++ D ++ F +R I + HS AE++++
Sbjct: 620 PIDLIFFFHKAIKKDLDYLVHGSAQLEGHDDL--VTDFQKRFNLIYFLHQIHSDAEEEIV 677
Query: 65 FPAVD--GEL-----SFFQEHAEEESQFNDFRSLIESI-QSEGATTTSEAEFYSKLCSQA 116
FPA++ G+L ++ +H E F +++ I + +T++++ K +
Sbjct: 678 FPALEAIGQLKNISHAYTFDHKHEVEHFGKMSRILDKISELHLLVSTTDSKIRDKRVLRR 737
Query: 117 DHIMETIQR-----------HFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIER 165
H++ +Q H EE+++ P+ R+ FS R+Q +++ L + ++++
Sbjct: 738 HHLIRKLQERCKSMHKLLSDHINREEIEIWPIIREFFSNREQGKIIGCILGRISAEILQD 797
Query: 166 VLPWLVGSLTEDEAE--MFLKNMQLAAPATDSALVTLFCGWACKARKDGMCLSSSASGCC 223
++PWL+ SLT++E MFL +M D L + G++ DG S
Sbjct: 798 MIPWLMASLTQEEQHVLMFLWSMATKNTMFDEWLGEWWNGYSVAKAADG-------SNDA 850
Query: 224 PAKNTCP 230
P +N P
Sbjct: 851 PLQNVEP 857
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 98/210 (46%), Gaps = 14/210 (6%)
Query: 5 PIDEILLWHNAIKKELNEIAAETRRIQSSGDFTN-----LSAFNERLQFIAEVFIFHSIA 59
PI + +H A++ EL+++ S N + R QF+ F +H A
Sbjct: 38 PILLFVCFHQALRSELDQLRPFAETASSLEHDPNRCREIVFKLQHRFQFLKLAFKYHCAA 97
Query: 60 EDKVIFPAVDGEL-----SFFQEHAEEESQFNDFRSLIESIQSEGATTTSEAEFYSKLCS 114
ED++IF A+D + ++ EH F+ ++ + ++ + ++ + +L
Sbjct: 98 EDEIIFHALDIHVKNVVCTYSLEHNSTNGLFDSILHFLDELM---GSSENISKLFRELVY 154
Query: 115 QADHIMETIQRHFCNEEVQVLPLARKHFSFRKQRELVYQSLCLMPLKLIERVLPWLVGSL 174
D + ++ +H EE QV PL + S ++Q LV+Q +C +P+ L+E VLPW+V L
Sbjct: 155 CIDILQTSVYQHMLKEEEQVFPLLIQKLSTKEQASLVWQFICSVPIMLLEEVLPWMVSFL 214
Query: 175 TEDEAEMFLKNMQLAAPATDSALVTLFCGW 204
+ D+ + AP ++ L + W
Sbjct: 215 SADKQAEVTRCFNEIAP-METTLQEVLVSW 243
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 36/212 (16%)
Query: 340 PIDTIFKFHIAIRKDLEYLD--VESGKLCDGDET----IIQQFTGRFRLLWGLYRAHSNA 393
PI FH A+R +L+ L E+ + D I+ + RF+ L ++ H A
Sbjct: 38 PILLFVCFHQALRSELDQLRPFAETASSLEHDPNRCREIVFKLQHRFQFLKLAFKYHCAA 97
Query: 394 EDEIVFPALESKEALHNVSHSYMLDHEQEEKLFEDISHVLSELSVLHEDMQRAHMSDDFS 453
EDEI+F AL+ + NV +Y L+H LF+ I H L EL
Sbjct: 98 EDEIIFHALDIH--VKNVVCTYSLEHNSTNGLFDSILHFLDEL----------------- 138
Query: 454 KSNFVISDANDSDNIRKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQ 513
S+NI K L +L ++ ++ QH+ +EE +++PL + S +EQ
Sbjct: 139 --------MGSSENISK---LFRELVYCIDILQTSVYQHMLKEEEQVFPLLIQKLSTKEQ 187
Query: 514 DKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQ 545
+V + I + +L+ +LPW+ S L+ D+Q
Sbjct: 188 ASLVWQFICSVPIMLLEEVLPWMVSFLSADKQ 219
>Medtr1g047740.6 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr1g047740.3 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr1g047740.2 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr1g047740.5 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr1g047740.1 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr1g047740.4 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:18053590-18048093 | 20130731
Length = 301
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 158/278 (56%), Gaps = 20/278 (7%)
Query: 658 KAVSGESSNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD-- 715
+++ GE S++ I + +D +GC+HY+R C+IRA CC ++F CR CH++A +
Sbjct: 30 ESLPGEESSESIN--TNDLQDKGYMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNDAKNGI 87
Query: 716 -------HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--R 766
H M R +++C C T Q V P C++ G+ M KY+C CK FDD+ +
Sbjct: 88 NVDYKHRHEMPRHQVKQVICSLCATEQEVQPNCINC---GVCMGKYFCETCKLFDDDISK 144
Query: 767 SVYHCPFCNICRVGQGLGIDYFHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTS 825
YHC C ICR G +FHC KC CCL + +H C+E + +CP+C + +F S
Sbjct: 145 QQYHCNGCGICRTGGQES--FFHCNKCGCCLSTQVENNHPCVEGAMHRDCPVCYEYIFES 202
Query: 826 SATVRALPCGHYMHSSCFQAYTVGH-YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYR 884
+ + +PCGH +H SC H YTCP+CSKS DM+ + LD +AA +PE+Y+
Sbjct: 203 TKEIVVMPCGHTIHKSCIDEMREHHRYTCPLCSKSFCDMSRVWERLDIEIAATPMPEQYQ 262
Query: 885 DRHQDILCNDCDKKSASRFHWLYHKCRFCGSYNTRVIK 922
++ ILCNDC RFH++ KC C SYNTR +
Sbjct: 263 NKMVWILCNDCGNTGNVRFHFVALKCLNCNSYNTRQTR 300
>Medtr2g020040.1 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr2:6639730-6643639 | 20130731
Length = 267
Score = 196 bits (497), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 149/256 (58%), Gaps = 17/256 (6%)
Query: 678 DPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD--------HSMDRKSTMEMMCM 729
D K +GC+HY+R C+IRA CC ++++CR CH+ A+ H + R +++C
Sbjct: 10 DFGKMGYGCKHYRRRCRIRAPCCNEVYSCRHCHNEATSMLKNPFDHHELVRNDVEQVVCS 69
Query: 730 QCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGIDY 787
C T QPV VC + G+ M +YYC++CKFFDD+ + +HC C ICRVG +Y
Sbjct: 70 VCDTEQPVAQVCTNC---GVRMGEYYCDLCKFFDDDTGKQQFHCEDCGICRVGGSE--NY 124
Query: 788 FHCMKCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCF-QA 845
FHC KC C + +H C+E + +CPIC + LF S + CGH MH C+ +
Sbjct: 125 FHCKKCGSCYSVALRDNHLCVENSMRHHCPICYEYLFDSLKDTTVMKCGHTMHCECYHEM 184
Query: 846 YTVGHYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRFHW 905
Y CPICSKS+ DM+ + +D + A V+P++YR+R ILCNDC+ + FH
Sbjct: 185 IKRDKYCCPICSKSVIDMSTAWKRIDEEIEATVMPDDYRNRKVWILCNDCNDTTEVSFHI 244
Query: 906 LYHKCRFCGSYNTRVI 921
+ HKC C SYNTR I
Sbjct: 245 IGHKCGHCSSYNTRAI 260
>Medtr7g102990.1 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr7:41395322-41392960 | 20130731
Length = 298
Score = 193 bits (490), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 157/276 (56%), Gaps = 22/276 (7%)
Query: 665 SNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD--------- 715
+N ++ SPS + FGC HYKR CKI + CC ++F CR CH+ + +
Sbjct: 5 NNHHVDDVSPS--EIGYGHFGCSHYKRRCKIISPCCNEIFDCRHCHNESKNSIQVDPQHR 62
Query: 716 HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPF 773
H + R ++C C T Q V VC+ G+ M +Y+C+ CKFFDD+ ++ YHC
Sbjct: 63 HDIPRHHVKRVICSLCSTEQDVQQVCIQC---GVCMGRYFCSKCKFFDDDVSKNQYHCDE 119
Query: 774 CNICRVGQGLGIDYFHCMKCNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRAL 832
C ICR G ++FHC KC CC L SH C+EK + NCP+C + LF ++ + L
Sbjct: 120 CGICRTGGEE--NFFHCNKCECCYSTLMKDSHHCIEKAMHQNCPVCFEFLFDTTKDITVL 177
Query: 833 PCGHYMHSSCFQAYTVG-HYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDIL 891
PCGH +H C + Y+CP+CSKS DM+ + +D +A+ +PE Y+++ IL
Sbjct: 178 PCGHTIHLGCVREMQQHLQYSCPVCSKSFCDMSRVWEKMDEEVASMPMPEMYQNKMVWIL 237
Query: 892 CNDCDKKSASRFHWLYHKCRFCGSYNTRVIKTEATN 927
CNDC + S RFH + HKC C SYNTR KT+A +
Sbjct: 238 CNDCGETSEVRFHIVAHKCLSCKSYNTR--KTQAAS 271
>Medtr4g057310.1 | RING finger and CHY zinc finger protein | HC |
chr4:20972656-20976575 | 20130731
Length = 278
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 145/253 (57%), Gaps = 20/253 (7%)
Query: 684 FGCEHYKRNCKIRAACCGKLFTCRFCHDNASD---------HSMDRKSTMEMMCMQCLTV 734
FGC HY+R CKI A CC ++F CR CH+ A + H + R +++C C T
Sbjct: 16 FGCTHYRRRCKIIAPCCNEVFDCRHCHNEAKNSDEIKPDCRHDIPRHEVKKIICTLCDTE 75
Query: 735 QPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGID-YFHCM 791
Q V C++ G+ + KY+C CKFFDD+ + YHC C ICR G G D +FHC
Sbjct: 76 QDVQQNCINC---GVCLGKYFCGTCKFFDDDISKQQYHCDECGICRTG---GSDNFFHCK 129
Query: 792 KCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTVGH 850
KC CC ++ H C+E+ + NCPIC + LF + + L CGH +H C + H
Sbjct: 130 KCGCCYSVEIKEGHNCVERAMHHNCPICFEYLFDTLREISVLTCGHTIHFECVKEMEKHH 189
Query: 851 -YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRFHWLYHK 909
Y+CP+CSKS+ DM+ + LD +L++ + E Y+++ ILCNDC S +FH + HK
Sbjct: 190 RYSCPVCSKSICDMSSVWKNLDEMLSSTPMSESYKNKKVWILCNDCGVNSHVQFHIVAHK 249
Query: 910 CRFCGSYNTRVIK 922
C C SYNTR I+
Sbjct: 250 CLSCNSYNTRQIQ 262
>Medtr3g108240.3 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr3:50011412-50017056 | 20130731
Length = 309
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 137/249 (55%), Gaps = 18/249 (7%)
Query: 684 FGCEHYKRNCKIRAACCGKLFTCRFCHDNASD---------HSMDRKSTMEMMCMQCLTV 734
+GC+HY+R C IRA CC ++F CR CH+ A + H + R +++C C T
Sbjct: 62 YGCQHYRRRCHIRAPCCNEIFDCRHCHNEAKNSIDIDQKHRHDIPRHQVKQVICSLCETE 121
Query: 735 QPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGIDYFHCMK 792
Q V C++ G+ M KY+C CK FDD+ + YHC C ICR G ++FHC K
Sbjct: 122 QEVQQNCINC---GVCMGKYFCGTCKLFDDDVSKQQYHCSGCGICRTGGSE--NFFHCYK 176
Query: 793 CNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTVG-H 850
C CC L H C+E + +CP+C + LF S V L CGH +H SC
Sbjct: 177 CGCCYSTLLKNGHPCVEGAMHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQ 236
Query: 851 YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRFHWLYHKC 910
Y CP+CSKS+ DM+ + +D LAA +PE Y ++ ILCNDC + S +FH + KC
Sbjct: 237 YACPLCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVWILCNDCGENSHVQFHLVAQKC 296
Query: 911 RFCGSYNTR 919
C SYNTR
Sbjct: 297 LNCISYNTR 305
>Medtr3g108240.1 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr3:50011412-50017056 | 20130731
Length = 309
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 137/249 (55%), Gaps = 18/249 (7%)
Query: 684 FGCEHYKRNCKIRAACCGKLFTCRFCHDNASD---------HSMDRKSTMEMMCMQCLTV 734
+GC+HY+R C IRA CC ++F CR CH+ A + H + R +++C C T
Sbjct: 62 YGCQHYRRRCHIRAPCCNEIFDCRHCHNEAKNSIDIDQKHRHDIPRHQVKQVICSLCETE 121
Query: 735 QPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGIDYFHCMK 792
Q V C++ G+ M KY+C CK FDD+ + YHC C ICR G ++FHC K
Sbjct: 122 QEVQQNCINC---GVCMGKYFCGTCKLFDDDVSKQQYHCSGCGICRTGGSE--NFFHCYK 176
Query: 793 CNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTVG-H 850
C CC L H C+E + +CP+C + LF S V L CGH +H SC
Sbjct: 177 CGCCYSTLLKNGHPCVEGAMHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMREHFQ 236
Query: 851 YTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRFHWLYHKC 910
Y CP+CSKS+ DM+ + +D LAA +PE Y ++ ILCNDC + S +FH + KC
Sbjct: 237 YACPLCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVWILCNDCGENSHVQFHLVAQKC 296
Query: 911 RFCGSYNTR 919
C SYNTR
Sbjct: 297 LNCISYNTR 305
>Medtr3g108240.2 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr3:50011574-50016702 | 20130731
Length = 307
Score = 179 bits (455), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 137/253 (54%), Gaps = 18/253 (7%)
Query: 680 EKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD---------HSMDRKSTMEMMCMQ 730
E+ C+HY+R C IRA CC ++F CR CH+ A + H + R +++C
Sbjct: 56 ERGYMECQHYRRRCHIRAPCCNEIFDCRHCHNEAKNSIDIDQKHRHDIPRHQVKQVICSL 115
Query: 731 CLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGIDYF 788
C T Q V C++ G+ M KY+C CK FDD+ + YHC C ICR G ++F
Sbjct: 116 CETEQEVQQNCINC---GVCMGKYFCGTCKLFDDDVSKQQYHCSGCGICRTGGSE--NFF 170
Query: 789 HCMKCNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYT 847
HC KC CC L H C+E + +CP+C + LF S V L CGH +H SC
Sbjct: 171 HCYKCGCCYSTLLKNGHPCVEGAMHQDCPVCFEYLFESVNDVSVLHCGHTIHKSCLNEMR 230
Query: 848 VG-HYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCNDCDKKSASRFHWL 906
Y CP+CSKS+ DM+ + +D LAA +PE Y ++ ILCNDC + S +FH +
Sbjct: 231 EHFQYACPLCSKSVCDMSKVWEKIDLELAATPMPEPYLNKTVWILCNDCGENSHVQFHLV 290
Query: 907 YHKCRFCGSYNTR 919
KC C SYNTR
Sbjct: 291 AQKCLNCISYNTR 303
>Medtr1g010150.1 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr1:1781683-1778859 | 20130731
Length = 205
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 116/206 (56%), Gaps = 9/206 (4%)
Query: 718 MDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCN 775
M R +++C C Q C++ G+ M KY+C+ CK +DD+ + YHC C
Sbjct: 1 MPRHQVKQVICSLCGAEQEAQQNCVNC---GVCMGKYFCDTCKLYDDDISKQQYHCNGCG 57
Query: 776 ICRVGQGLGIDYFHCMKCNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPC 834
ICR G ++FHC KC CC L SH C+E + +CP+C + LF S V +PC
Sbjct: 58 ICRTGGQE--NFFHCNKCGCCYSTLLRDSHPCVEGAMHHDCPVCFEYLFESRNDVIVMPC 115
Query: 835 GHYMHSSCFQAYTVG-HYTCPICSKSLGDMAVYFGMLDALLAAEVLPEEYRDRHQDILCN 893
GH +H SC +TCP+CSKS+ DM+ + LD ++A +PE Y+++ ILCN
Sbjct: 116 GHTIHKSCLNEMREHFQFTCPLCSKSVCDMSKVWEKLDMEISATPMPEPYQNKMVWILCN 175
Query: 894 DCDKKSASRFHWLYHKCRFCGSYNTR 919
DC K S RFH++ KC C SYNTR
Sbjct: 176 DCGKTSNVRFHFVAQKCLNCNSYNTR 201
>Medtr4g057310.2 | RING finger and CHY zinc finger protein | HC |
chr4:20972564-20974847 | 20130731
Length = 220
Score = 145 bits (365), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 115/206 (55%), Gaps = 20/206 (9%)
Query: 684 FGCEHYKRNCKIRAACCGKLFTCRFCHDNASD---------HSMDRKSTMEMMCMQCLTV 734
FGC HY+R CKI A CC ++F CR CH+ A + H + R +++C C T
Sbjct: 19 FGCTHYRRRCKIIAPCCNEVFDCRHCHNEAKNSDEIKPDCRHDIPRHEVKKIICTLCDTE 78
Query: 735 QPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPFCNICRVGQGLGID-YFHCM 791
Q V C++ G+ + KY+C CKFFDD+ + YHC C ICR G G D +FHC
Sbjct: 79 QDVQQNCINC---GVCLGKYFCGTCKFFDDDISKQQYHCDECGICRTG---GSDNFFHCK 132
Query: 792 KCNCCLGLK-SASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTVGH 850
KC CC ++ H C+E+ + NCPIC + LF + + L CGH +H C + H
Sbjct: 133 KCGCCYSVEIKEGHNCVERAMHHNCPICFEYLFDTLREISVLTCGHTIHFECVKEMEKHH 192
Query: 851 -YTCPICSKSLGDMAVYFGMLDALLA 875
Y+CP+CSKS+ DM+ + LD ++
Sbjct: 193 RYSCPVCSKSICDMSSVWKNLDEMVC 218
>Medtr7g102990.2 | CHY and CTCHY and RING-type zinc finger protein |
HC | chr7:41395363-41392641 | 20130731
Length = 220
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 106/192 (55%), Gaps = 19/192 (9%)
Query: 665 SNKQIEGCSPSFRDPEKQIFGCEHYKRNCKIRAACCGKLFTCRFCHDNASD--------- 715
+N ++ SPS + FGC HYKR CKI + CC ++F CR CH+ + +
Sbjct: 5 NNHHVDDVSPS--EIGYGHFGCSHYKRRCKIISPCCNEIFDCRHCHNESKNSIQVDPQHR 62
Query: 716 HSMDRKSTMEMMCMQCLTVQPVGPVCMSPSCNGLSMAKYYCNICKFFDDE--RSVYHCPF 773
H + R ++C C T Q V VC+ G+ M +Y+C+ CKFFDD+ ++ YHC
Sbjct: 63 HDIPRHHVKRVICSLCSTEQDVQQVCIQC---GVCMGRYFCSKCKFFDDDVSKNQYHCDE 119
Query: 774 CNICRVGQGLGIDYFHCMKCNCCLG-LKSASHKCLEKGLEMNCPICCDDLFTSSATVRAL 832
C ICR G ++FHC KC CC L SH C+EK + NCP+C + LF ++ + L
Sbjct: 120 CGICRTGGEE--NFFHCNKCECCYSTLMKDSHHCIEKAMHQNCPVCFEFLFDTTKDITVL 177
Query: 833 PCGHYMHSSCFQ 844
PCGH +H C +
Sbjct: 178 PCGHTIHLGCVR 189
>Medtr2g007340.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:955202-956149 | 20130731
Length = 315
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 814 NCPICCDDLFTSSATVRALPCGHYMHSSCFQAYTVGHYTCPICSKSL 860
NCPIC D+ F VR LPC H+ HS C + H TCP+C L
Sbjct: 200 NCPICKDE-FEVDVQVRELPCKHFYHSDCILPWLQMHNTCPVCRHEL 245