Miyakogusa Predicted Gene

Lj2g3v0704840.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0704840.1 tr|Q9LJQ6|Q9LJQ6_ARATH AT3G18240 protein
OS=Arabidopsis thaliana GN=AT3g18240/MIE15_3 PE=2
SV=1,37.72,0.0000000000002,seg,NULL,CUFF.35248.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g082590.1 | hypothetical protein | HC | chr6:30805659-3080...   100   7e-22

>Medtr6g082590.1 | hypothetical protein | HC |
           chr6:30805659-30807828 | 20130731
          Length = 180

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 4/121 (3%)

Query: 1   MNSNLLRNLAFHTRRLLLS-PFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAQKKQDP 59
           M S LLRN++FH RR+ LS  F                              H + +Q+ 
Sbjct: 1   MTSILLRNISFHARRIRLSHTFKSSPSILSLYKPTSFFSSSSDPPPSTIPHAHEKNQQNQ 60

Query: 60  LV---VEEISNEELKSRVARLQEGDEDAIPSLFEAIMQRYLTDKPIEADPELMKEILGKG 116
                +E+ISNEELK RVARL+EGD+DAIP +FEA++QRYLT KPIEAD +LM++ILGKG
Sbjct: 61  QSLDDLEDISNEELKRRVARLREGDDDAIPEVFEAVLQRYLTGKPIEADQDLMRDILGKG 120

Query: 117 T 117
           T
Sbjct: 121 T 121