Miyakogusa Predicted Gene

Lj2g3v0690380.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0690380.1 tr|Q01D14|Q01D14_OSTTA WGS project CAID00000000
data, contig chromosome 03 OS=Ostreococcus tauri GN=,32.34,2e-17,
,NODE_19177_length_1243_cov_66.435234.path1.1
         (264 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g106690.1 | PAP fibrillin domain protein,expressed protein...   355   2e-98

>Medtr8g106690.1 | PAP fibrillin domain protein,expressed protein |
           HC | chr8:45034141-45031608 | 20130731
          Length = 232

 Score =  355 bits (912), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 186/258 (72%), Positives = 205/258 (79%), Gaps = 37/258 (14%)

Query: 8   SPIHSLTNSVPLTCFKASKLSLHFNPLKPTTPLSLRTTKLHLHLVKFNRQRTTSPRATLD 67
           SPIH L             +S  F P KP     LRT           R RT   RAT D
Sbjct: 11  SPIHVL------------HISSSFKPSKP-----LRT-----------RIRT---RATFD 39

Query: 68  DVQRDQLSSTPLLI-EDDNPKKEVEESVQVLKNAAKTRKVAAEEVLSALSVIEKAKIDPS 126
           D+Q+     TPL++ +D+NPK+EVEE V++LKNAAKTRKV AEE+LSALS+IEKAKIDPS
Sbjct: 40  DIQK-----TPLVVVQDNNPKREVEECVKLLKNAAKTRKVPAEEILSALSLIEKAKIDPS 94

Query: 127 GFFDILGGKESPGRTWMLIFTAKKQLKGGGYFPLTAVQRFDAAAKRIENGVYLGPIGQLT 186
            F D LGGKESPGRTWMLIFTAKK+L GGGYFPLTAVQRFDAAAKRIENGV+LGPIGQLT
Sbjct: 95  AFLDTLGGKESPGRTWMLIFTAKKKLDGGGYFPLTAVQRFDAAAKRIENGVFLGPIGQLT 154

Query: 187 FEGRLSWKNRILAFIFENLRIKIGPLKPLQISLGKKEDTEPNTKSPFFIWFYVDEEIAVA 246
           FEGRLSWKNRIL+FIFENLRIK+GPLKPLQISLG+KED EP+TK PFFIWFYVDEEIAVA
Sbjct: 155 FEGRLSWKNRILSFIFENLRIKVGPLKPLQISLGQKEDREPSTKDPFFIWFYVDEEIAVA 214

Query: 247 RGRSGGTAFWCRCRQVNI 264
           RGRSGGTAFWCRCRQV+I
Sbjct: 215 RGRSGGTAFWCRCRQVDI 232