Miyakogusa Predicted Gene

Lj2g3v0677940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0677940.1 Non Characterized Hit- tr|I3S416|I3S416_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.06,0.0000000005, ,NODE_97508_length_331_cov_10.746223.path1.1
         (34 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g107030.1 | 3-oxo-5-alpha-steroid 4-dehydrogenase | HC | c...    60   5e-10
Medtr8g107030.3 | 3-oxo-5-alpha-steroid 4-dehydrogenase | HC | c...    60   6e-10

>Medtr8g107030.1 | 3-oxo-5-alpha-steroid 4-dehydrogenase | HC |
          chr8:45212143-45214354 | 20130731
          Length = 307

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 30/34 (88%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGTVIDSHFL LTAI+T  YQ LFFIITALLKFD
Sbjct: 1  MGTVIDSHFLALTAIITFAYQLLFFIITALLKFD 34


>Medtr8g107030.3 | 3-oxo-5-alpha-steroid 4-dehydrogenase | HC |
          chr8:45212143-45214658 | 20130731
          Length = 253

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 30/34 (88%)

Query: 1  MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFD 34
          MGTVIDSHFL LTAI+T  YQ LFFIITALLKFD
Sbjct: 1  MGTVIDSHFLALTAIITFAYQLLFFIITALLKFD 34