Miyakogusa Predicted Gene

Lj2g3v0659280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0659280.1 Non Characterized Hit- tr|G7KQA5|G7KQA5_MEDTR
Putative uncharacterized protein OS=Medicago truncatul,72.06,4e-18,
,CUFF.35169.1
         (71 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g071040.1 | hypothetical protein | HC | chr6:26233845-2623...    96   1e-20

>Medtr6g071040.1 | hypothetical protein | HC |
          chr6:26233845-26234408 | 20130731
          Length = 97

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 58/68 (85%), Gaps = 2/68 (2%)

Query: 1  MENMKINEDGSFSQKGVPIHSQVRKIKQESEKVVDWSPGQPEMRPVLRDISRQISRSPLG 60
          M+N K  +D    QKG+PIHSQV KIKQESEK+ DWSPG+PE+RPVLR+ISR+ISRSPLG
Sbjct: 1  MKNNK--KDEGVGQKGIPIHSQVMKIKQESEKIFDWSPGKPEIRPVLREISRRISRSPLG 58

Query: 61 ISGRPISV 68
          ISG+ ISV
Sbjct: 59 ISGQAISV 66