Miyakogusa Predicted Gene

Lj2g3v0658080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0658080.1 Non Characterized Hit- tr|I1KJ84|I1KJ84_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2418
PE=,91.88,0,DHO_dh,Dihydroorotate dehydrogenase, class 1/ 2; no
description,Aldolase-type TIM barrel; FMN-linked,CUFF.35158.1
         (395 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g071210.1 | dihydroorotate dehydrogenase family protein | ...   760   0.0  

>Medtr6g071210.1 | dihydroorotate dehydrogenase family protein | HC
           | chr6:26330078-26323222 | 20130731
          Length = 424

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/395 (92%), Positives = 375/395 (94%)

Query: 1   MASLSMTQVRTGKSASGFSLNCPGKVQARPSRVGFRVFASEAQVPEPDLSVTVNGLHMPN 60
           MA+LSMTQ++T  SAS FS N   KV  RPSRV F+VFASE QV EPDLSV VNGLHMPN
Sbjct: 1   MANLSMTQLKTRNSASRFSFNFSKKVYPRPSRVDFKVFASEGQVSEPDLSVKVNGLHMPN 60

Query: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRAGANGSAKGE 120
           PFVIGSGPPGTNYTVMKRAFDEGWG VIAKTVSLDAAKVINVTPRYARLRA ANGSAKGE
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLRANANGSAKGE 120

Query: 121 IIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGID 180
           IIGW+NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGID
Sbjct: 121 IIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGID 180

Query: 181 AIEINFSCPHGMPERKMGAAVGQDCALLEEVCRWINAKATVPVWAKMTPNITDISEPARV 240
           AIEINFSCPHGMPERKMGAAVGQDCALLEEVC WINAKATVPVWAKMTPNITDIS+PARV
Sbjct: 181 AIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTPNITDISQPARV 240

Query: 241 ALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALAKVMSIAKM 300
           ALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIAL KVMSIAKM
Sbjct: 241 ALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPIALGKVMSIAKM 300

Query: 301 MKSEFDSEDYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLCVELQDFM 360
           MKSEFDSE+YSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKL +EL+DFM
Sbjct: 301 MKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKKLSLELKDFM 360

Query: 361 KKHNFTSIEDFRGTSLQYFTTHTDLVQRQQEAIRQ 395
           KKHNFTSIEDFRG SLQYFTTHTDLV RQQEAI+Q
Sbjct: 361 KKHNFTSIEDFRGASLQYFTTHTDLVHRQQEAIKQ 395