Miyakogusa Predicted Gene
- Lj2g3v0637020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0637020.1 tr|G7IND7|G7IND7_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_2g0,28.38,1e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; seg,NULL; FAMILY NOT NAMED,NULL;
PPR,,CUFF.35179.1
(317 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g094650.1 | PPR containing plant protein | HC | chr8:39524... 478 e-135
Medtr0265s0020.1 | hypothetical protein | LC | scaffold0265:5018... 153 2e-37
Medtr1g058940.1 | PPR containing plant protein | HC | chr1:21827... 153 3e-37
Medtr7g028623.1 | PPR containing plant-like protein | HC | chr7:... 130 2e-30
Medtr4g108900.1 | PPR containing plant-like protein | HC | chr4:... 125 4e-29
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 120 2e-27
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 114 2e-25
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 4e-25
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 112 7e-25
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 7e-25
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 111 8e-25
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 110 1e-24
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 2e-24
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 109 4e-24
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 5e-24
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 6e-24
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 1e-23
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 107 2e-23
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 106 3e-23
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 106 3e-23
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 106 3e-23
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 106 3e-23
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 4e-23
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 5e-23
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 105 7e-23
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 104 1e-22
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 2e-22
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 103 2e-22
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 103 3e-22
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 103 3e-22
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 4e-22
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 5e-22
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 5e-22
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 7e-22
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 101 8e-22
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 101 1e-21
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 100 1e-21
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 2e-21
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 2e-21
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 100 2e-21
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 100 2e-21
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 100 3e-21
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 4e-21
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 5e-21
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 5e-21
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 7e-21
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 8e-21
Medtr1g056160.1 | PPR containing plant protein | HC | chr1:24577... 98 1e-20
Medtr1g056160.3 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.8 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.5 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.4 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.6 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.7 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr1g056160.2 | PPR containing plant protein | HC | chr1:24576... 98 1e-20
Medtr3g008430.2 | PPR containing plant-like protein | HC | chr3:... 98 1e-20
Medtr3g008430.1 | PPR containing plant-like protein | HC | chr3:... 98 1e-20
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 2e-20
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 97 2e-20
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 97 2e-20
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 97 3e-20
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 3e-20
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 3e-20
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 96 5e-20
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 96 6e-20
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 96 6e-20
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 96 7e-20
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 95 7e-20
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 95 7e-20
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 1e-19
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 94 1e-19
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 94 1e-19
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 94 1e-19
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 1e-19
Medtr7g029515.1 | PPR containing plant protein | HC | chr7:10579... 94 2e-19
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 94 2e-19
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 94 2e-19
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 94 2e-19
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 94 2e-19
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 6e-19
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 7e-19
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 7e-19
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 92 8e-19
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 8e-19
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 92 9e-19
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 92 9e-19
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 1e-18
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 1e-18
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 91 1e-18
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 91 1e-18
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 91 1e-18
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 91 2e-18
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 91 2e-18
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 91 2e-18
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 4e-18
Medtr1g052810.1 | PPR containing protein, putative | HC | chr1:2... 89 4e-18
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 89 4e-18
Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 5e-18
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 89 6e-18
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 7e-18
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 89 8e-18
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 88 1e-17
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 88 1e-17
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 1e-17
Medtr4g021220.1 | PPR containing plant-like protein | HC | chr4:... 88 1e-17
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 1e-17
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 87 1e-17
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 2e-17
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 87 2e-17
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 2e-17
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 2e-17
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 87 3e-17
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 3e-17
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 4e-17
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 86 4e-17
Medtr6g075180.1 | PPR containing plant-like protein | HC | chr6:... 85 7e-17
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 85 8e-17
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 85 8e-17
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 85 8e-17
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 9e-17
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 1e-16
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 84 1e-16
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 84 1e-16
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 84 1e-16
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 84 1e-16
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 84 1e-16
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 84 2e-16
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 84 2e-16
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 3e-16
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 83 3e-16
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 83 3e-16
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 83 3e-16
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 83 4e-16
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 83 4e-16
Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC | ... 82 5e-16
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 82 5e-16
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 82 8e-16
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 82 9e-16
Medtr8g102710.1 | PPR containing plant-like protein | HC | chr8:... 81 1e-15
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 81 1e-15
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 1e-15
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 2e-15
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 80 2e-15
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 80 2e-15
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 80 3e-15
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 4e-15
Medtr1g108270.1 | PPR containing plant-like protein | HC | chr1:... 79 4e-15
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 79 4e-15
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 79 4e-15
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 79 5e-15
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 79 6e-15
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 79 6e-15
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 79 6e-15
Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC | ... 79 6e-15
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 79 7e-15
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 79 7e-15
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 78 1e-14
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 77 2e-14
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 77 2e-14
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 2e-14
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 77 3e-14
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 76 3e-14
Medtr7g085100.1 | PPR containing plant-like protein | HC | chr7:... 76 4e-14
Medtr1g086500.1 | PPR containing plant-like protein | HC | chr1:... 76 4e-14
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 76 4e-14
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 4e-14
Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC | ... 76 4e-14
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 76 5e-14
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 76 5e-14
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 76 5e-14
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 76 5e-14
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 75 6e-14
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 75 6e-14
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 75 7e-14
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 8e-14
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 75 9e-14
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 75 9e-14
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 75 1e-13
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 74 1e-13
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 74 1e-13
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 74 2e-13
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 74 2e-13
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 74 2e-13
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 74 2e-13
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 74 2e-13
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 3e-13
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 73 3e-13
Medtr8g463610.1 | PPR containing plant-like protein | HC | chr8:... 73 4e-13
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 73 4e-13
Medtr1g080120.2 | PPR containing plant-like protein | HC | chr1:... 73 4e-13
Medtr1g080120.1 | PPR containing plant-like protein | HC | chr1:... 73 4e-13
Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 5e-13
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 72 5e-13
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 72 8e-13
Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putati... 72 8e-13
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 72 8e-13
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 72 8e-13
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 72 9e-13
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 72 9e-13
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 72 1e-12
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 71 1e-12
Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 71 1e-12
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 71 2e-12
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 2e-12
Medtr4g094688.1 | PPR containing plant protein | HC | chr4:38731... 70 2e-12
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 2e-12
Medtr7g073260.1 | PPR containing plant-like protein | HC | chr7:... 70 2e-12
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 70 3e-12
Medtr2g022860.1 | membrane-associated salt-inducible protein | H... 69 5e-12
Medtr7g005780.1 | PPR containing plant protein | HC | chr7:35224... 69 6e-12
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 69 7e-12
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 1e-11
Medtr2g060630.1 | PPR containing plant-like protein | HC | chr2:... 68 1e-11
Medtr4g094245.2 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr4g094245.1 | PPR containing plant-like protein | HC | chr4:... 68 1e-11
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 68 1e-11
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 68 1e-11
Medtr3g108060.1 | PPR containing plant-like protein | HC | chr3:... 67 2e-11
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 67 2e-11
Medtr8g080940.2 | PPR containing plant-like protein | HC | chr8:... 67 3e-11
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 67 3e-11
Medtr1g100593.1 | PPR containing plant-like protein | HC | chr1:... 66 4e-11
Medtr1g100593.2 | PPR containing plant-like protein | HC | chr1:... 66 4e-11
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 66 4e-11
Medtr7g104640.1 | PPR containing plant-like protein | HC | chr7:... 66 5e-11
Medtr4g079260.1 | PPR containing plant-like protein | LC | chr4:... 66 5e-11
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 65 7e-11
Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC | ... 65 1e-10
Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 65 1e-10
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 65 1e-10
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 65 1e-10
Medtr0652s0020.1 | PPR superfamily protein | LC | scaffold0652:7... 64 2e-10
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 64 3e-10
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 63 3e-10
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 63 3e-10
Medtr0051s0110.1 | pentatricopeptide (PPR) repeat protein | LC |... 63 4e-10
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 63 5e-10
Medtr5g044120.1 | PPR containing plant-like protein | HC | chr5:... 62 5e-10
Medtr7g017610.1 | PPR containing plant-like protein | HC | chr7:... 62 5e-10
Medtr2g104640.1 | PPR containing plant-like protein | HC | chr2:... 62 8e-10
Medtr4g060570.1 | PPR containing plant-like protein | HC | chr4:... 62 9e-10
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 62 9e-10
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 62 1e-09
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr5g048070.1 | PPR containing plant-like protein | HC | chr5:... 61 1e-09
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 61 1e-09
Medtr4g068800.4 | PPR containing plant-like protein | HC | chr4:... 61 2e-09
Medtr4g068800.3 | PPR containing plant-like protein | HC | chr4:... 61 2e-09
Medtr4g068800.5 | PPR containing plant-like protein | HC | chr4:... 61 2e-09
Medtr4g068800.2 | PPR containing plant-like protein | HC | chr4:... 61 2e-09
Medtr8g098955.1 | PPR containing plant-like protein | HC | chr8:... 61 2e-09
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 61 2e-09
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr7g082160.1 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 60 2e-09
Medtr6g045263.1 | PPR containing plant-like protein | HC | chr6:... 60 2e-09
Medtr6g045263.2 | PPR containing plant-like protein | HC | chr6:... 60 3e-09
Medtr0026s0200.1 | PPR containing plant-like protein | HC | scaf... 60 3e-09
Medtr2g078690.1 | PPR containing plant-like protein | HC | chr2:... 60 3e-09
Medtr7g072070.1 | PPR containing plant-like protein | HC | chr7:... 60 3e-09
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 60 3e-09
Medtr4g068800.1 | PPR containing plant-like protein | HC | chr4:... 60 4e-09
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 59 4e-09
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 59 6e-09
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 59 9e-09
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 58 1e-08
Medtr7g016910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 58 1e-08
Medtr6g071320.1 | PPR containing plant-like protein | HC | chr6:... 58 1e-08
Medtr5g019860.1 | PPR containing plant-like protein | HC | chr5:... 57 2e-08
Medtr8g037320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr2g088910.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr8g098445.1 | PPR containing plant-like protein | HC | chr8:... 57 3e-08
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 57 3e-08
Medtr5g096480.1 | PPR containing plant-like protein | HC | chr5:... 57 3e-08
Medtr6g079340.1 | PPR containing plant-like protein | LC | chr6:... 57 3e-08
Medtr2g026645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 56 4e-08
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 55 6e-08
Medtr7g027940.1 | PPR containing plant-like protein | HC | chr7:... 55 6e-08
Medtr0051s0100.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 7e-08
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 55 7e-08
Medtr4g104790.1 | PPR containing plant protein | LC | chr4:43421... 55 1e-07
Medtr4g104800.1 | PPR containing plant protein | LC | chr4:43426... 55 1e-07
Medtr6g021740.1 | PPR containing plant-like protein | HC | chr6:... 54 2e-07
Medtr2g103550.2 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr2g103550.1 | PPR containing plant-like protein | HC | chr2:... 54 2e-07
Medtr2g090885.3 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr2g090885.2 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr2g090885.4 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr2g090885.1 | PPR containing plant-like protein | HC | chr2:... 53 3e-07
Medtr6g065100.1 | PPR containing plant-like protein | HC | chr6:... 52 5e-07
Medtr8g107230.1 | PPR containing plant-like protein | HC | chr8:... 52 6e-07
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 7e-07
Medtr7g021410.1 | PPR containing plant-like protein | LC | chr7:... 51 1e-06
Medtr2g026600.1 | PPR containing plant protein | LC | chr2:96505... 51 2e-06
Medtr6g079320.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 50 2e-06
Medtr4g072990.1 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 50 3e-06
Medtr4g072990.2 | PPR containing plant-like protein | HC | chr4:... 50 3e-06
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 50 3e-06
Medtr2g018820.1 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr2g018820.2 | PPR containing plant-like protein | HC | chr2:... 50 4e-06
Medtr7g099380.1 | PPR containing plant-like protein | HC | chr7:... 50 4e-06
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 5e-06
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 49 5e-06
Medtr4g104830.1 | PPR containing plant protein | LC | chr4:43434... 49 9e-06
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 48 1e-05
>Medtr8g094650.1 | PPR containing plant protein | HC |
chr8:39524430-39522502 | 20130731
Length = 521
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/317 (72%), Positives = 262/317 (82%), Gaps = 3/317 (0%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
ME+DYGLKRDR S+KVVVEKLC KG+ASYAE+M DLA+ FPDE +CD+L+ G+C+DGK
Sbjct: 203 MEKDYGLKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGK 262
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+EEARRLAGEMYRGGFELGV AYNAMLDCVC++CR+KDPF LHSE++KVLVEMD GVPR
Sbjct: 263 IEEARRLAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEMDSHGVPR 322
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N+ETFNVLITN CKIRKT DAL LF+ M +W C PNETTF+VLI+SLYQAARLEEGD MI
Sbjct: 323 NLETFNVLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARLEEGDAMI 382
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D MKSAG+GA LDKKAY+ FLTILCGIER+ HALK+F MMKADGCEPG+KTYDLLM KLG
Sbjct: 383 DGMKSAGYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYDLLMKKLG 442
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAVDPRYX---XXXXXXXXXXRETLPEKMAXXXX 297
AH+RVDKANALF+EA+SRGL VT KE+ VDPR+ RETLPEKMA
Sbjct: 443 AHDRVDKANALFNEARSRGLDVTLKEHVVDPRFSKKKEKKAVKAEKKRETLPEKMARKRR 502
Query: 298 XXXXXXXSYVKKPKRMR 314
S+VKKPK+ R
Sbjct: 503 RLKQIRLSFVKKPKKSR 519
>Medtr0265s0020.1 | hypothetical protein | LC |
scaffold0265:5018-6379 | 20130731
Length = 203
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
LE+GD MID KSAG+GA LDKKAY+ FL ILCG+ER++HALK+ MMKADGCEP +KTY
Sbjct: 6 LEQGDAMIDGTKSAGYGAFLDKKAYFDFL-ILCGVERIDHALKISTMMKADGCEPDVKTY 64
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRY 273
D LM KLGAH+RVDK N+L +EA SRG VTPKEY VDPR+
Sbjct: 65 DFLMKKLGAHDRVDKVNSLSNEACSRGFDVTPKEYVVDPRF 105
>Medtr1g058940.1 | PPR containing plant protein | HC |
chr1:21827766-21827410 | 20130731
Length = 118
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/101 (71%), Positives = 84/101 (83%), Gaps = 1/101 (0%)
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
LE+GD MID KSAG+GA LDKKAY+ FL ILCG+ER++HALK+ MMKADGCEP +KTY
Sbjct: 6 LEQGDAMIDGTKSAGYGAFLDKKAYFDFL-ILCGVERIDHALKISTMMKADGCEPDVKTY 64
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRY 273
D LM KLGAH+RVDK N+L +EA SRG VTPKEY VDPR+
Sbjct: 65 DFLMKKLGAHDRVDKVNSLSNEACSRGFDVTPKEYVVDPRF 105
>Medtr7g028623.1 | PPR containing plant-like protein | HC |
chr7:9796163-9794058 | 20130731
Length = 365
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 9/266 (3%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMV---KDLARVIFPDEAMCDMLIKGWCVDGKLEEARR 66
D ++ ++ LCSKG A AE +V KD + + P + L+ GW ++ ++E+ R
Sbjct: 51 DEFTVTAIINALCSKGHAKRAEGVVWHHKDKIKGVLP--CVYRSLLYGWSLERNVKESWR 108
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEM-DYRGVPRNVETF 125
+ EM G +V YN L C+CE + +P L EA V++EM Y+ P ++ ++
Sbjct: 109 IIQEMKTNGVTPDLVCYNTFLRCLCERNLRNNPSGLVLEALNVMMEMRSYKVFPTSI-SY 167
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N+L++ L K R+ +++ ++ M + G P+ ++ ++ R L+ + R +G E++D+M
Sbjct: 168 NILLSCLGKTRRVKESCQILEAMNKSGVAPDWVSYYLVSRVLFLSGRFGKGKEIVDQMIE 227
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G + K YY + ILCG+ERV HAL +F MK YD+L+ KL
Sbjct: 228 KGLVP--NHKFYYSLIGILCGVERVNHALDLFEKMKGSSVGGYGPVYDVLIPKLCRGGDF 285
Query: 246 DKANALFHEAQSRGLAVTPKEYAVDP 271
+K L+ E G+ + + +DP
Sbjct: 286 EKGRELWDEGTFMGITLQCSKDVLDP 311
>Medtr4g108900.1 | PPR containing plant-like protein | HC |
chr4:45145185-45146537 | 20130731
Length = 422
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERM---VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARR 66
D ++ ++ LCSKG A AE + KD + P + L+ GW ++ ++E+RR
Sbjct: 177 DEFTVTAIINALCSKGHAKRAEGVDWHHKDKIKGELP--CVYRSLLYGWSMERNVKESRR 234
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEM-DYRGVPRNVETF 125
+ EM G +V YN L C+CE + +P L EA V++EM Y+ P ++ ++
Sbjct: 235 IIQEMKTNGVTPDIVCYNTFLRCLCERNLRNNPSGLVQEALNVMMEMRSYKVFPTSI-SY 293
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N+L++ L K R+ +++ ++ M + G P+ ++ ++ R L+ + R +G E++D+M
Sbjct: 294 NILLSCLGKTRRVKESCQILEAMNKSGVAPDWVSYYLVTRVLFMSGRFGKGKEIVDQMIE 353
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G + K YY + ILCG+ERV HAL +F MK YD+L+ KL
Sbjct: 354 KGLVP--NHKFYYSLIGILCGVERVNHALDLFEKMKGSSVGGYGPVYDVLIPKLCRGGNF 411
Query: 246 DKANALFHEA 255
+K L+ E
Sbjct: 412 EKGRELWDEG 421
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Query: 36 DLARVI-----FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
DLAR++ PD + LI+G C+ + A + EM G + Y+ ++D +
Sbjct: 363 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 422
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
C R K+ +L L EM+ G RN +N LI LCK R+ EDA ++F +M
Sbjct: 423 CYERRLKEALML-------LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 475
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G + T+ LI L + R+EE +++D+M G DK Y LT C + +
Sbjct: 476 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP--DKFTYNSLLTYFCRVGDI 533
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
E A + M ++GCEP I TY L+ L RVD A+ L Q +G+ +TP Y
Sbjct: 534 EKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 590
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 10/264 (3%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
YG S+KV+V C +G A R V +++ F PD+ + L+ G+C G + +
Sbjct: 231 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVND 290
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + M GF+ V YN+++ +C+L +A ++L +M R N
Sbjct: 291 ALDIVDFMIEKGFDPDVYTYNSLISGMCKLGE-------FEKAIEILQQMILRECSPNTV 343
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N LI+ LCK + E A L + G P+ TF LI+ L + + EM + M
Sbjct: 344 TYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEM 403
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
K+ G D+ Y + LC R++ AL + M++ GC Y+ L+ L
Sbjct: 404 KNK--GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSR 461
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
R++ A +F + + G++ + Y
Sbjct: 462 RIEDAEEIFDQMELLGVSRSSVTY 485
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 115/255 (45%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +++ LC A M +++ + PDE +LI C + +L+EA
Sbjct: 372 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 431
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G V YN ++D +C+ R +D AE++ +M+ GV R+ T
Sbjct: 432 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED-------AEEIFDQMELLGVSRSSVT 484
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK ++ E+A +L +M G P++ T+ L+ + +E+ +++ M
Sbjct: 485 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 544
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y + LC RV+ A K+ ++ G Y+ ++ L R
Sbjct: 545 SNG--CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 602
Query: 245 VDKANALFHEAQSRG 259
+ LF E +
Sbjct: 603 TKEGMRLFREMMEKS 617
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 12/264 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + V+++ LC A M++++A + PDE L++G+ +G L A
Sbjct: 162 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 221
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ +M G L V+ +++ C+ R + EA + ++E+ G + T
Sbjct: 222 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE-------EALRFVLEVSEEGFSPDQVT 274
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN L+ C+I DAL + M E G P+ T+ LI + + E+ E++ +M
Sbjct: 275 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 334
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S + Y ++ LC +E A + ++ + G P + T++ L+ L
Sbjct: 335 LRE--CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKN 392
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
D A +F E +++G P E+
Sbjct: 393 QDIAMEMFEEMKNKG--CKPDEFT 414
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 98/247 (39%), Gaps = 32/247 (12%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++ + D KL+ L +M G L V +N ++ +C+ + + L+
Sbjct: 130 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 189
Query: 103 HSE----------------AEKVLVEMDYRGVPR-------------NVETFNVLITNLC 133
E + + E D G + NV + VL+ C
Sbjct: 190 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV-SVKVLVNGFC 248
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K + E+AL+ + E G P++ TF L+ + + + +++D M GF D
Sbjct: 249 KEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDP--D 306
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y ++ +C + E A+++ M C P TY+ L+S L N ++ A L
Sbjct: 307 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 366
Query: 254 EAQSRGL 260
S+GL
Sbjct: 367 ILVSKGL 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF+ YN L+ + E + K +LHS+ M G+ +V TFNVLI LCK
Sbjct: 127 GFKPDTNFYNIALNALVEDNKLKLVEMLHSK-------MVNEGIVLDVSTFNVLIKALCK 179
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ A+ + M G P+E TF L++ + L +M +M G+G L
Sbjct: 180 AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQM--LGYGCLLTN 237
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ + C RVE AL+ + +G P T++ L++ V+ A
Sbjct: 238 VSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDA 291
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 9/232 (3%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
++ I PD +L+ G+C DG ++EA+ + M + + VV Y++++D C +
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV- 454
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
++AE + M +RGV NV+++N++I CKI+ ++A+KLF M +P+
Sbjct: 455 ------NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ LI L ++ R+ E++D M G D Y L LC V+ A+ +
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEMHYR--GQQPDIITYNSILDALCKKHHVDKAITLL 566
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+K G P + TY +L+ L +++ A +F + +G + Y V
Sbjct: 567 TKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++I G+C ++EA +L EM+ V+ Y++++D +C+ R S A +
Sbjct: 477 NIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI-------SYALE 529
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ EM YRG ++ T+N ++ LCK + A+ L ++ G P+ T+ +L++ L
Sbjct: 530 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC 589
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
Q+ +LE+ ++ + + G+ +LD AY + C + AL + + M+ +GC P
Sbjct: 590 QSGKLEDARKVFEDLLVKGY--NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPD 647
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
KTY++++ L + D A L E RGL
Sbjct: 648 AKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 18/260 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGK---- 60
G + D +L ++ C KG A K +A D+ LI G C G+
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
LE RR G++ + VV YN ++D +C+ D F L+SE ++ R P
Sbjct: 318 LELLRRNDGKLVQPD----VVMYNTIIDGMCKDKHVNDAFDLYSE------KVSKRIFP- 366
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T+N LI+ C + K +DA+ LF++M P+ TF +L+ + ++E ++
Sbjct: 367 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 426
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M D Y + C + V A +F M G +++Y+++++
Sbjct: 427 AMMMKQSIKP--DVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFC 484
Query: 241 AHNRVDKANALFHEAQSRGL 260
VD+A LF E + +
Sbjct: 485 KIKMVDEAMKLFKEMHHKQI 504
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 43/218 (19%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +++ C A ++ K++ + IFPD LI G C G++ A
Sbjct: 468 GVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYA 527
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ G + ++ YN++LD +C+ +A +L ++ +G+ ++ T
Sbjct: 528 LELVDEMHYRGQQPDIITYNSILDALCKKHHV-------DKAITLLTKLKGQGIRPDMNT 580
Query: 125 FNVLITNLCKIRKTEDALKLFH-----------------------------------RMG 149
+ +L+ LC+ K EDA K+F +M
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
E GC P+ T+ ++I SL++ + ++++ M G
Sbjct: 641 ENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678
>Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29928022-29932441 | 20130731
Length = 544
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 114/223 (51%), Gaps = 9/223 (4%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
M +L+ G+C +G+++EA+ + M + G + VV Y++++D C + ++A
Sbjct: 269 MIFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEV-------NKA 321
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
E + M +RGV N ++++++I CKI+ ++A+KLF M +P+ T+ LI
Sbjct: 322 ESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSALIDG 381
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
L ++ R+ +++D+M G ++ Y L LC +V+ A+ + K G +
Sbjct: 382 LCKSGRISYALQLVDQMHDRGVAPNI--VTYNSILDALCKTHQVDKAIALLTKFKDQGIQ 439
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P + TY +L+ L R+ A +F + +G +T Y V
Sbjct: 440 PSVYTYTILIDGLCKGGRLKDARNIFEDLLVKGYNITVNTYTV 482
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C + AE + ++ R + + ++I G+C ++EA
Sbjct: 297 GIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANAKSYSIMINGFCKIKMVDEA 356
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM+ V+ Y+A++D +C+ R S A +++ +M RGV N+ T
Sbjct: 357 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRI-------SYALQLVDQMHDRGVAPNIVT 409
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N ++ LCK + + A+ L + + G P+ T+ +LI L + RL++ + + +
Sbjct: 410 YNSILDALCKTHQVDKAIALLTKFKDQGIQPSVYTYTILIDGLCKGGRLKDARNIFEDLL 469
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +++ Y + C ++ +L + + M+ +GC P TY++++ L ++
Sbjct: 470 VKGYNITVN--TYTVMIQGFCSHGLLDESLALLSKMEENGCIPDAVTYEIIICSLFDKDK 527
Query: 245 VDKANALFHEAQSRGL 260
DKA L E +RGL
Sbjct: 528 NDKAEKLLREMITRGL 543
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 21/265 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C G +A ++ + + + PD LIKG C+ G + +A
Sbjct: 98 GIASDLVTCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQA 157
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V+Y +++ +C++ A ++L D + V +V
Sbjct: 158 LHFHDKVIAMGFHLDQVSYGTLINGLCKVGET-------IAALELLRRFDGKFVQPDVVM 210
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I +CK + DA L+ M PN T+ LI +L++ + ++M
Sbjct: 211 YNTIIDGMCKDKHVNDAFDLYSEMVAKRISPNVVTYSALISGFCIVGKLKDAFDFFNKM- 269
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ + C RV+ A V AMM G +P + TY LM N
Sbjct: 270 ------------IFILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNE 317
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA ++F+ RG+ K Y++
Sbjct: 318 VNKAESIFNTMSHRGVTANAKSYSI 342
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
++ +N +L + +L + LH + M+ G+ ++ T ++LI + C++
Sbjct: 68 IIQFNKILSSLVKLNQYPTVVSLHPQ-------MELNGIASDLVTCSILINSFCQLGHIP 120
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A + ++ + G P+ TF LI+ L + + D++ + GF LD+ +Y
Sbjct: 121 FAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQALHFHDKVIAMGF--HLDQVSYGT 178
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ LC + AL++ +P + Y+ ++ + V+ A L+ E ++
Sbjct: 179 LINGLCKVGETIAALELLRRFDGKFVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEMVAKR 238
Query: 260 LAVTPKEYA 268
++ Y+
Sbjct: 239 ISPNVVTYS 247
>Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr3:33997007-33999751 | 20130731
Length = 579
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 10/270 (3%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDG 59
M R + D +++ LC F + A R+ + +A+ IFP+ +L+ C D
Sbjct: 137 MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDR 196
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K ++A L M + G + VV Y A++D C L Q + +A + M GV
Sbjct: 197 KGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYC-LVNQVN------KALNIFNVMVQEGVE 249
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
NV +N++I LCK ++ ++A+ LF M P+ T+ +LI L + ++ E+
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLEL 309
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+D M+S G ++D Y L LC ++ A+ + +K G +P + TY L+ L
Sbjct: 310 VDEMRS--IGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
R++ A +F E + G +T Y V
Sbjct: 368 CKDGRLEDAYVIFQEILTEGYHITVWTYNV 397
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 122/256 (47%), Gaps = 13/256 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K +L +++ C G ++ ++ + ++ + P+ LIKG C++G+ EA
Sbjct: 40 GIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEA 99
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF+L V+Y +++ +C++ E + + V +V
Sbjct: 100 LLFHDHVVAHGFKLDQVSYAILMNGLCKM----------GETRAAMQMLRKTWVNADVVM 149
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I +LCK + DA +L+ M G +PN TF +L+ +L + + ++ ++ M
Sbjct: 150 YSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMM 209
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y + C + +V AL +F +M +G EP + Y+++++ L R
Sbjct: 210 KKGVKPNV--VTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKR 267
Query: 245 VDKANALFHEAQSRGL 260
VD+A LF E + +
Sbjct: 268 VDEAMNLFKEMHWKKI 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 100/219 (45%), Gaps = 9/219 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +++I G C +++EA L EM+ VV YN ++D +C+L +
Sbjct: 250 PNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI------ 303
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
S + +++ EM G ++ T+N L+ LCK + A+ L + + G PN T+
Sbjct: 304 -STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTT 362
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + RLE+ + + + G+ ++ Y + LC + AL + + M+
Sbjct: 363 LIDGLCKDGRLEDAYVIFQEILTEGYHITV--WTYNVMINGLCKKGLFDEALALLSRMED 420
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ C P +Y+ ++ L K N L RGL+
Sbjct: 421 NACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 8/191 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEAR 65
+ D + ++++ LC G S + +V ++ + D + L+ C + L++A
Sbjct: 283 INPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAI 342
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L E+ G + V Y ++D +C+ R +D +++ E +L E G V T+
Sbjct: 343 TLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQE---ILTE----GYHITVWTY 395
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
NV+I LCK ++AL L RM + C P+ ++ +I +L + + ++++ M
Sbjct: 396 NVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIV 455
Query: 186 AGFGASLDKKA 196
G L KK
Sbjct: 456 RGLSKRLKKKV 466
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 115/227 (50%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++L+ G+C DGK++E + + M + G + VV Y +++D C L ++ +
Sbjct: 292 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC-LVKEVN---- 346
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A+ +L M RGV +++++N+LI CKI+K ++A+ LF M P+ T+
Sbjct: 347 --KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNS 404
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + ++ +++D M G D Y L LC +V+ A+ + +K
Sbjct: 405 LIDGLCKLGKISYALKLVDEMHDRGVPP--DIITYSSILDALCKNHQVDKAIALLTKLKD 462
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G P + TY +L+ L R++ A+ +F + +G +T Y V
Sbjct: 463 QGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 509
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 10/222 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + PD ++LI G+C K++EA L EM+ VV YN+++D +C+L +
Sbjct: 358 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI-- 415
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
S A K++ EM RGVP ++ T++ ++ LCK + + A+ L ++ + G PN
Sbjct: 416 -----SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 470
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ +LI L + RLE+ + + + G+ +++ Y + C + AL + +
Sbjct: 471 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVN--TYTVMIHGFCNKGLFDEALTLLS 528
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
MK + C P TY++++ L + DKA L E +RGL
Sbjct: 529 KMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL-REMITRGL 569
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 16/268 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C G +A + + R+ + P+ LIKG C+ G++ +A
Sbjct: 114 GINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKGQIHQA 173
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF+L V Y ++ +C++ + A +L +D V NV
Sbjct: 174 LLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR-------AALDLLRRVDGNLVQPNVVM 226
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I +CK + DA L+ M G PN T+ LI + +L++ ++ ++M
Sbjct: 227 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 286
Query: 185 SAGFGASLDKKAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
K Y F ++ C +++ VFAMM G +P + TY LM
Sbjct: 287 LENI-----KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 341
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAV 269
V+KA ++ + RG+ + Y +
Sbjct: 342 VKEVNKAKSILYTMSQRGVNPDIQSYNI 369
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S ++++ C A + K++ + I PD + LI G C GK+ A
Sbjct: 359 GVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYA 418
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKD----------PFLLHS 104
+L EM+ G ++ Y+++LD +C+ L + KD L+
Sbjct: 419 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 478
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + ++ +G V T+ V+I C ++AL L +M + C P+
Sbjct: 479 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALTLLSKMKDNSCIPD 538
Query: 157 ETTFVVLIRSLY---QAARLEEGDEMIDR 182
T+ ++IRSL+ + + E+ EMI R
Sbjct: 539 AVTYEIIIRSLFDKDENDKAEKLREMITR 567
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++ G+ + TFN+LI C++ A +F ++ G +PN TF LI+ L
Sbjct: 109 QMEFEGINPDFFTFNILINCFCQLGLIPFAFSVFAKILRMGYHPNTITFTTLIKGLCLKG 168
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ + D + + GF LD+ Y + LC + AL + + + +P +
Sbjct: 169 QIHQALLFHDNVVAMGF--QLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVM 226
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y ++ + V+ A L+ E S+G++ Y+
Sbjct: 227 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 263
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++ C G + A + K ++ I PD +L+ G+C +G+++EA
Sbjct: 226 GISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEA 285
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G + VV Y +++D C L +Q + +A+ + M GV NV++
Sbjct: 286 KNVLAMMMKQGIKPDVVTYCSLMDGYC-LVKQVN------KAKSIFNTMAQGGVTANVQS 338
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I CKI+K ++A+ LF M P+ T+ LI L ++ ++ +++D M
Sbjct: 339 YNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMH 398
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G DK Y L LC +V+ A+ + MK +G +P + TY +L+ L R
Sbjct: 399 DR--GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
+ A +F + +G +T Y V
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTV 481
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 109/212 (51%), Gaps = 9/212 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++I G+C K++EA L EM+ VV YN+++D +C+ + S A K
Sbjct: 340 NIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI-------SYALK 392
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ EM RGVP + T+N ++ LCK + + A+ L +M + G P+ T+ +LI L
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ RL++ + + + G+ ++ Y + C + + AL + + M+ +GC P
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITV--YTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
KTY++++ L + D A L E +RGL
Sbjct: 511 AKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ G ++ + ++ + + P+ LIKG C+ G++ +A
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V Y +++ +C++ + S A ++L +D + V NV
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQT-------SAALQLLRRVDGKLVQPNVVM 198
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I ++CK++ +A L+ M G P+ T+ LI +L + + ++M
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMI 258
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S D + + C RV+ A V AMM G +P + TY LM +
Sbjct: 259 SEEINP--DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA ++F+ G+ + Y +
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNI 341
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 120/260 (46%), Gaps = 18/260 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G + + +L +++ LC KG A + + F +C LI G C G+ A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 65 ----RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
RR+ G++ + VV YN ++D +C++ + F L+SE M +G+
Sbjct: 181 LQLLRRVDGKLVQPN----VVMYNTIIDSMCKVKLVNEAFDLYSE-------MVSKGISP 229
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T++ LI+ C + K DA+ LF++M P+ TF +L+ + R++E ++
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M G D Y + C +++V A +F M G +++Y+++++
Sbjct: 290 AMMMKQGIKP--DVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 241 AHNRVDKANALFHEAQSRGL 260
+VD+A LF E + +
Sbjct: 348 KIKKVDEAMNLFKEMHCKNI 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +++ C A + K++ + I PD + LI G C GK+ A
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYA 390
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKD----------PFLLHS 104
+L EM+ G + YN++LD +C+ L + KD L+
Sbjct: 391 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDG 450
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A+ + ++ +G V T+ V+I C + AL L +M + GC PN
Sbjct: 451 LCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPN 510
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
T+ ++I SL++ + ++++ M + G
Sbjct: 511 AKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
EM++ G+ ++ TFN+LI ++ T + +F + + G PN T LI+ L
Sbjct: 81 EMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKG 140
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ + D++ + GF L+K Y + LC + + AL++ + +P +
Sbjct: 141 QIHQALHFHDKVVALGF--HLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 198
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y+ ++ + V++A L+ E S+G++ Y+
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 16/261 (6%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
EKL ++ + Y++ +VK ++ PD LI G+C+ G+ +EA L EM
Sbjct: 201 EKLVTEAYELYSQMIVKKVS----PDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINP 256
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLH----------SEAEKVLVEMDYRGVPRNVETFNVL 128
V +N ++D +C+ K+ + ++A+ V + R V +V ++ ++
Sbjct: 257 DVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTII 316
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I LCKI+ ++AL LF+ M G P++ T+ LI L ++ R+ E++D+M + G
Sbjct: 317 IKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQ 376
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
A D Y FL LC +V+ A+ + +K G +P I TY++L+ L R + A
Sbjct: 377 PA--DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENA 434
Query: 249 NALFHEAQSRGLAVTPKEYAV 269
+F + +G VT Y +
Sbjct: 435 QVIFQDLLIKGYKVTVWTYNI 455
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 27/273 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAER----MVKDLARV--------------IFPDEAM 47
+ D + ++V+ LC +G + M+K++ +V + PD
Sbjct: 253 NINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHS 312
Query: 48 CDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE 107
++IK C ++EA L EM G V Y++++D +C+ R S A
Sbjct: 313 YTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERI-------SHAW 365
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
++L +M RG P +V T+ + LCK + + A+ L ++ + G PN T+ +LI L
Sbjct: 366 ELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGL 425
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
+ R E + + G+ ++ Y + LC + A+ + M+ +GC P
Sbjct: 426 CKEGRFENAQVIFQDLLIKGYKVTV--WTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTP 483
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ TY+ ++ L ++ KA L E +RGL
Sbjct: 484 DVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 52/295 (17%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ V+ C G +A ++ + ++ + PD LIKG C++GK+ EA +
Sbjct: 85 TFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHV 144
Query: 72 YRGGFELGVVAYNAMLDCVCE--------------------------------LCRQKDP 99
GF L V+Y +++ +C+ LC++K
Sbjct: 145 IARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEK-- 202
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
L +EA ++ +M + V +V TF+ LI C + + ++A LFH M P+ T
Sbjct: 203 --LVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCT 260
Query: 160 FVVLIRSLYQAARLEEGDEM-------IDRMKSAGFGASL--------DKKAYYQFLTIL 204
F +L+ +L + +E + ++++ A ++ D +Y + L
Sbjct: 261 FNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRL 320
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
C I+ V+ AL +F M+ G P TY L+ L R+ A L + +RG
Sbjct: 321 CKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARG 375
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD ++L+ +C +G+++EA+ M + G + +V YN+++D C +
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV---- 331
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ A+ +L M +RGV V ++N++I CKI+ + A+KLF M +PN T+
Sbjct: 332 ---NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITY 388
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ E+ID M G D Y L LC V+ A+ + +
Sbjct: 389 NSLIDGLCKSGRISYALELIDLMHDR--GQQPDIITYSSILDALCKNHLVDKAIALLIKL 446
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L R++ A +F + +G +T Y V
Sbjct: 447 KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTV 495
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 31/284 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C G +A ++ + ++ + PD + IKG+C+ G++ +A
Sbjct: 100 GIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQA 159
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
++ GF L V+Y +++ +C EL R+ D L+
Sbjct: 160 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDS 219
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++A + EM R + N+ T++ LI+ C + K +DA+ LF++M P+
Sbjct: 220 MCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPD 279
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ + + R++E + M G D Y + C + V A +
Sbjct: 280 VYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP--DIVTYNSLMDGYCLVNEVNMAKSI 337
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M G +++Y+++++ VD+A LF E + +
Sbjct: 338 LNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI 381
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++I G+C +++A +L EM+ V+ YN+++D +C+ R S A +
Sbjct: 354 NIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI-------SYALE 406
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ M RG ++ T++ ++ LCK + A+ L ++ + G PN T+ +LI L
Sbjct: 407 LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLC 466
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ RLE+ + + + G+ +++ Y + C + AL + + MK + C P
Sbjct: 467 KGGRLEDARNIFEDLLVKGYNLTVN--TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY++++ L + DKA L E +RGL
Sbjct: 525 AITYEIIICSLFDKDENDKAEKLLREMITRGL 556
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S +V+ C A ++ K++ + IFP+ + LI G C G++ A L M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411
Query: 72 YRGGFELGVVAYNAMLDCVCE----------LCRQKD----------PFLLHS------- 104
+ G + ++ Y+++LD +C+ L + KD L+
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471
Query: 105 -EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+A + ++ +G V T+ V+I C ++AL L +M + C P+ T+ ++
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGF 188
I SL+ ++ ++++ M + G
Sbjct: 532 ICSLFDKDENDKAEKLLREMITRGL 556
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M+YRG+ N FN+LI C++ A + ++ + G P+ T I+
Sbjct: 95 KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKG 154
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ + D++ + GF LD+ +Y + LC + AL++ + + +
Sbjct: 155 QIHQALNFHDKLVALGF--HLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM 212
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y ++ + V+ A L+ E SR ++ Y+
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYS 249
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 19/234 (8%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
+ E M+K+ I PD ++LI G C +G++ +AR L G M + G +L VV Y++++D
Sbjct: 260 FNEMMLKN----IDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKSGVKLNVVTYSSLMD 315
Query: 89 C---VCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
V E+ + KD F +++V GV N+ ++N++I LC + ++A+ LF
Sbjct: 316 GYFQVNEVNKAKDVF-------EIMVRW---GVSPNIHSYNIMIDGLCNSKMVDEAVNLF 365
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
+M PN T+ LI L ++ R+ ++ID M G A++ Y + LC
Sbjct: 366 KKMHLRNMVPNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRGQAANV--ITYTSLMDALC 423
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
++ A+ +F MK G EP + TY++L+ +L R+ A L E RG
Sbjct: 424 KNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADAWYLIDEMHDRG 477
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%), Gaps = 31/285 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+ + S ++++ LC+ A + K + R + P+ + LI G C G++
Sbjct: 336 WGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTYNSLIYGLCKSGRISY 395
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKD----------PFLLH 103
L EM G V+ Y +++D +C+ + KD L+
Sbjct: 396 VLDLIDEMCDRGQAANVITYTSLMDALCKNHNLDKAIALFTKMKDLGVEPNVYTYNILID 455
Query: 104 --------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
++A ++ EM RG P NV T+ LI LCK + A++ F ++ +WG
Sbjct: 456 RLCKSGRIADAWYLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQA 515
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
+ T+ VLI L + RL+ E+ + G+ LD Y ++ LC + L
Sbjct: 516 DVHTYTVLIDGLCKGGRLKNALEVFRILLIKGY--HLDVLTYTVMISGLCKEGLFDEVLT 573
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ + M+ +GC P TY++++ L ++D A L E +RGL
Sbjct: 574 LLSKMEENGCAPDAITYEIIICALFGKGKIDMAEKLLCEMIARGL 618
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ + +L +++ C ++A ++ + ++ + P+ LI G C++G++++A
Sbjct: 92 GIQPNIVTLTILINSFCHLNQLNFAFSILGKILKLGYEPNTVTLTTLINGLCLNGEVKKA 151
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE-------------------------------- 92
++ F+L +Y +++ +C+
Sbjct: 152 FHFYDDVIAKEFQLNQFSYGILINGLCKSGETKAALSLLRMIEGLSVKPDVVMYTTIIDS 211
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
LC+ K L ++A ++ EM + + NV T++ LI C + + +DA++LF+ M
Sbjct: 212 LCKDK----LVTDAYELYSEMVEKKIFPNVVTYSTLIYGFCIVGQLKDAVRLFNEMMLKN 267
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
P+ TF +LI L + + + ++ M + G L+ Y + + V
Sbjct: 268 IDPDVYTFNILIDGLCKNGEMRKARNLLGLMIKS--GVKLNVVTYSSLMDGYFQVNEVNK 325
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
A VF +M G P I +Y++++ L VD+A LF + R + Y
Sbjct: 326 AKDVFEIMVRWGVSPNIHSYNIMIDGLCNSKMVDEAVNLFKKMHLRNMVPNTVTY 380
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ +L+ G+C +G+++EA+ + M + G + VV Y++++D C +
Sbjct: 220 INPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEV---- 275
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++AE + M +RGV NV++++++I CKI+ ++A+KLF M +P+ T+
Sbjct: 276 ---NKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 332
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ E++D M G D Y L LC V+ A+ + +
Sbjct: 333 SALIDGLCKSGRISYALELVDEMHDR--GQQPDIITYNSILDALCKKHHVDKAIALLTKL 390
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L +++ A +F + +G + Y V
Sbjct: 391 KGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTV 439
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C + AE + ++ R + + ++I G+C ++EA
Sbjct: 254 GIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEA 313
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM+ V+ Y+A++D +C+ R S A +++ EM RG ++ T
Sbjct: 314 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRI-------SYALELVDEMHDRGQQPDIIT 366
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N ++ LCK + A+ L ++ G P+ T+ +L++ L ++ +LE+ ++ + +
Sbjct: 367 YNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLL 426
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +LD AY + C + AL + + M+ +GC P KTY++++ L +
Sbjct: 427 VKGY--NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 484
Query: 245 VDKANALFHEAQSRGL 260
D A L E RGL
Sbjct: 485 NDMAEKLLREMIMRGL 500
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 119/284 (41%), Gaps = 31/284 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C G +A + K L PD LIKG C+ G + +A
Sbjct: 44 GIKLDLVNCSILINSFCQLGHIPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQA 103
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
++ GF L V+Y +++ +C EL R+ D L+
Sbjct: 104 LHFHDKVIAMGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDAVMYSSIIDS 163
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++A + EM + + NV T++ LI+ C + K +DA+ LF++M PN
Sbjct: 164 MCKDKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPN 223
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ + R++E ++ M G D Y + C + V A +
Sbjct: 224 VYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP--DVVTYSSLMDGYCLVNEVNKAESI 281
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
F M G +++Y ++++ VD+A LF E + +
Sbjct: 282 FNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQI 325
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 114/229 (49%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ +L+ G+C +G+++EA+ + M + G + VV Y++++D C +
Sbjct: 108 INPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEV---- 163
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++AE + M +RGV NV++++++I CKI+ ++A+KLF M +P+ T+
Sbjct: 164 ---NKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITY 220
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ E++D M G D Y L LC V+ A+ + +
Sbjct: 221 SALIDGLCKSGRISYALELVDEMHDR--GQQPDIITYNSILDALCKKHHVDKAIALLTKL 278
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L +++ A +F + +G + Y V
Sbjct: 279 KGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLLVKGYNLDVYAYTV 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 127/258 (49%), Gaps = 10/258 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C + AE + ++ R + + ++I G+C ++EA
Sbjct: 142 GIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEA 201
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM+ V+ Y+A++D +C+ R S A +++ EM RG ++ T
Sbjct: 202 MKLFKEMHHKQIFPDVITYSALIDGLCKSGRI-------SYALELVDEMHDRGQQPDIIT 254
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N ++ LCK + A+ L ++ G P+ T+ +L++ L ++ +LE+ ++ + +
Sbjct: 255 YNSILDALCKKHHVDKAIALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARKVFEDLL 314
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +LD AY + C + AL + + M+ +GC P KTY++++ L +
Sbjct: 315 VKGY--NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDE 372
Query: 245 VDKANALFHEAQSRGLAV 262
D A L E RGL V
Sbjct: 373 NDMAEKLLREMIMRGLLV 390
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 17/221 (7%)
Query: 44 DEAMCDMLIKGWCVDGK----LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
D+ LI G C G+ LE RR+ G++ +L V Y++++D +C+ D
Sbjct: 6 DQVSYGTLINGLCKVGETRAALELLRRVDGKL----VQLDAVMYSSIIDSMCKDKHVNDA 61
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
F L+SE M + + NV T++ LI+ C + K +DA+ LF++M PN T
Sbjct: 62 FDLYSE-------MAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNVYT 114
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
F +L+ + R++E ++ M G D Y + C + V A +F
Sbjct: 115 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKP--DVVTYSSLMDGYCLVNEVNKAESIFNT 172
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M G +++Y ++++ VD+A LF E + +
Sbjct: 173 MSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQI 213
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF L V+Y +++ +C++ + L + LV++D ++ +I ++CK
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLD-------AVMYSSIIDSMCK 54
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ DA L+ M PN T+ LI +L++ ++ ++M ++
Sbjct: 55 DKHVNDAFDLYSEMAAKRISPNVVTYSALISGFCIVGKLKDAIDLFNKMILENINPNV-- 112
Query: 195 KAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
Y F ++ C RV+ A V AMM G +P + TY LM N V+KA ++
Sbjct: 113 ---YTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYCLVNEVNKAESI 169
Query: 252 FHEAQSRGLAVTPKEYAV 269
F+ RG+ + Y++
Sbjct: 170 FNTMSHRGVTANVQSYSI 187
>Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24933458-24936238 | 20130731
Length = 614
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 120/233 (51%), Gaps = 9/233 (3%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
L + I PD ++L+ G C +G++++AR + M + G + +V YN+++D L +Q
Sbjct: 266 LLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYF-LVKQ 324
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++ +A V M RGV +V++++++I LCK + ++A+ LF M PN
Sbjct: 325 EN------KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPN 378
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI L + R+ + ++++ M + G A D Y L LC +V+ A+ +
Sbjct: 379 TVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPA--DVITYSSLLDALCKNHQVDKAITL 436
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+K G +P I TY +L+ L + R+ A A++ + +G + K Y V
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNV 489
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERM-----VKDLARVIF-----------PDEAMCDM 50
+K+ R L V++++ +Y M VK + F PD +
Sbjct: 290 MKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSI 349
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G C ++EA L EM+ V YN+++D + + R S+A ++
Sbjct: 350 MINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRI-------SDAWDLV 402
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM RG P +V T++ L+ LCK + + A+ L ++ + G PN T+ +L+ L +
Sbjct: 403 NEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKN 462
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
RL++ + + G+ LD K Y + LC + AL + + M+ +GC P
Sbjct: 463 GRLKDAQAVYQDLLIKGY--HLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAV 520
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
TY+ L+ L +++ DKA L E +G AV
Sbjct: 521 TYETLVRALFENDKNDKAVKLLREMIVQGSAV 552
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 118/264 (44%), Gaps = 10/264 (3%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEAR 65
++ D + +++ C G ++A ++ + ++ F PD LIKG C++GK+ EA
Sbjct: 95 IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
++ GF L V+Y +++ +C+ + A +VL ++D V NV +
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETR-------AALQVLRKIDGLLVQPNVVMY 207
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N +I +LCK + A L M +P+ T+ LI RL+E + ++M
Sbjct: 208 NTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLL 267
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
D + + LC ++ A V A+M G + I TY+ LM +
Sbjct: 268 KNIKP--DVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQE 325
Query: 246 DKANALFHEAQSRGLAVTPKEYAV 269
+KA +F+ RG+ + Y++
Sbjct: 326 NKATFVFNTMARRGVTPDVQSYSI 349
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%), Gaps = 16/256 (6%)
Query: 17 VVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
++ C G YA RM+ D I P+ +LI G+C +GK+ EA+ + M
Sbjct: 239 LISGFCVVGKLKYAVDLFNRMISD---NINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
+ +L VV YN+++D C L +Q + +A+ + M RGV +V +++++I
Sbjct: 296 KKNVKLDVVTYNSLMDGYC-LVKQVN------KAKSLFNVMAQRGVTPDVWSYSIMINGF 348
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
CKI+ ++A+KLF M +PN T+ L+ L ++ R E++D M G +++
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNI 408
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y L +C V+ A+ + +K G +P I TY +L++ L R+D A +F
Sbjct: 409 --ITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVF 466
Query: 253 HEAQSRGLAVTPKEYA 268
+ +G + Y
Sbjct: 467 EDLLVKGYSPNIYTYT 482
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 110/222 (49%), Gaps = 9/222 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + PD ++I G+C ++EA +L EM+ VV YN+++D +C+ R
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRT-- 389
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
S A +++ EM RG P N+ T+N ++ +CK + A+ L ++ E G P+
Sbjct: 390 -----SCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ VLI L + RL++ ++ + + G+ ++ Y + C + L + +
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNI--YTYTSLINGFCNKGFFDEGLAMLS 502
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
MK +GC P TY++L+ L + DKA L E +RGL
Sbjct: 503 KMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 31/284 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ G ++ K L + PD +LIKG C+ G++ +A
Sbjct: 88 GIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKA 147
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFL-------------- 101
++ GF+L V+Y +++ +C +L R+ D L
Sbjct: 148 LYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDS 207
Query: 102 -----LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
L ++A + EM + + +V T++ LI+ C + K + A+ LF+RM PN
Sbjct: 208 MCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPN 267
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +LI + ++ E ++ M LD Y + C +++V A +
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKK--NVKLDVVTYNSLMDGYCLVKQVNKAKSL 325
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
F +M G P + +Y ++++ VD+A LF E + +
Sbjct: 326 FNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 22/247 (8%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + E ++K+ I P+ +LI C +GK++EA+ + M + G E VV Y
Sbjct: 205 EAFGLFHEMLLKN----INPNIYTFTILIDALCKEGKIKEAKNVIAVMMKEGVEPTVVTY 260
Query: 84 NAMLDCVC---ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
N ++D C E+ + K+ F + + R + NV ++ ++I LCKI+ ++
Sbjct: 261 NTLMDGYCLDNEVNKAKNVFNV----------IGKRRMTPNVHSYTIIINGLCKIKMVDE 310
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
AL F M C PN T+ LI +L ++ R+ E++D+M G A++ Y
Sbjct: 311 ALNFFKEMH---CEPNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPANI--ITYNSL 365
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
L LC +V+ A+ + +K G +P I TY++L+ L R++ A +F + +G
Sbjct: 366 LHALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGY 425
Query: 261 AVTPKEY 267
V Y
Sbjct: 426 KVKVWTY 432
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 12/222 (5%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + P+ ++I G C ++EA EM+ E V Y++++D +C+ R
Sbjct: 286 RRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMH---CEPNTVTYSSLIDALCKSGRI-- 340
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
S A ++L +M RG P N+ T+N L+ LCK + + A+ L ++ + G PN
Sbjct: 341 -----SHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQGIQPNIN 395
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ +LI L + RLE + + G+ + Y + LC + A+ +
Sbjct: 396 TYNILIDGLCKEGRLENAQVIFQDLLIKGYKVKV--WTYNTMINGLCLEGLFDEAMTLLE 453
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M+ +GC P + TY+ ++ L ++ DKA L E +RGL
Sbjct: 454 KMEDNGCTPDVVTYETIIYALFKNDENDKAEKLLREMITRGL 495
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 113/251 (45%), Gaps = 16/251 (6%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
EKL ++ + Y++ ++K ++ P+ LI G+C+ G+L+EA L EM
Sbjct: 165 EKLVTEAYELYSQMILKKIS----PNVVTLSSLIYGFCIVGQLKEAFGLFHEMLLKNINP 220
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
+ + ++D +C+ + K EA+ V+ M GV V T+N L+ C +
Sbjct: 221 NIYTFTILIDALCKEGKIK-------EAKNVIAVMMKEGVEPTVVTYNTLMDGYCLDNEV 273
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
A +F+ +G+ PN ++ ++I L + ++E M + Y
Sbjct: 274 NKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNFFKEMHCEP-----NTVTYS 328
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC R+ HA ++ M G I TY+ L+ L +++VDKA AL + + +
Sbjct: 329 SLIDALCKSGRISHAWELLDQMHDRGQPANIITYNSLLHALCKNHQVDKAIALVKKIKDQ 388
Query: 259 GLAVTPKEYAV 269
G+ Y +
Sbjct: 389 GIQPNINTYNI 399
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P LI G C+ GKL+EA ++ GF L V+Y A++ +C++ +
Sbjct: 80 PTTITFSTLINGMCLKGKLKEALHFHDDVIGLGFHLDQVSYGALISGLCKIGETR----- 134
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A K+L +++ + V NV +N++I +LCK + +A +L+ +M PN T
Sbjct: 135 --AALKMLRQIEGKLVNTNVVMYNIIIDSLCKEKLVTEAYELYSQMILKKISPNVVTLSS 192
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI +L+E + M ++ + + LC +++ A V A+M
Sbjct: 193 LIYGFCIVGQLKEAFGLFHEMLLKNINPNI--YTFTILIDALCKEGKIKEAKNVIAVMMK 250
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+G EP + TY+ LM N V+KA +F+ R + Y +
Sbjct: 251 EGVEPTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTI 297
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 130/279 (46%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + Y E +VK IFPD + LI G+C+ G+LE+A RL EM
Sbjct: 114 DKLVVDAYDLYCEMVVKR----IFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVP 169
Query: 79 GVVAYNAMLDCVCE-------------LCRQK------------DPFLLHSEAEK---VL 110
V ++N ++D +C+ + +Q D + L +A K +
Sbjct: 170 NVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIF 229
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M GV ++ ++N++I L K + ++A+ LF M P+ T+ LI L +
Sbjct: 230 NAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKL 289
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ ++ID M++ G A++ Y L +LC + A+++F +K G EP +
Sbjct: 290 GRISYVWDLIDEMRATGRSANV--ITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMV 347
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY++L+ L + R+ A +FH+ +G + + Y V
Sbjct: 348 TYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTV 386
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 126/278 (45%), Gaps = 17/278 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++RD +L +++ +YA ++ + ++ + PD L+KG C++ ++++A
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP--FL------------LHSEAEKVL 110
++ GF L V+Y +++ +C+ K P F+ L +A +
Sbjct: 65 LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLY 124
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM + + +V T+N LI C + + EDA++LF+ M PN +F +LI L +
Sbjct: 125 CEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKE 184
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
++ G ++ M D + +++ A +F M +G ++
Sbjct: 185 GDVKGGKSVLAVMIKQSVKP--DVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLR 242
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+Y+++++ L VD+A LF E Q + + Y+
Sbjct: 243 SYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYS 280
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 46/264 (17%)
Query: 13 SLKVVVEKLCS----KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
S ++++ LC KG S M+K + PD C LI G+ + K +AR +
Sbjct: 173 SFNILIDGLCKEGDVKGGKSVLAVMIKQSVK---PDVVTCSSLIDGYFLVKKANKARYIF 229
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE--------------------- 107
M + G + + +YN M++ + + + +L E +
Sbjct: 230 NAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKL 289
Query: 108 -------KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++ EM G NV T++ L+ LCK + A+++F ++ + G PN T+
Sbjct: 290 GRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTY 349
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ L + RL++ E+ + G+ LD + Y + LC AL
Sbjct: 350 NILVDGLCKNGRLKDAQEIFHDLLIKGY--RLDVRLYTVMINGLC-----REAL----FD 398
Query: 221 KADGCEPGIKTYDLLMSKLGAHNR 244
+A GC P TY++++ L +++
Sbjct: 399 EAYGCTPNAVTYEIIIRALFKNDK 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 34/191 (17%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ L A + K++ + + PD LI G G++
Sbjct: 236 GVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYV 295
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G V+ Y+++L+ +C+ A ++ ++ +G N+ T
Sbjct: 296 WDLIDEMRATGRSANVITYSSLLNVLCKSGH-------FDTAIRIFTKIKDKGFEPNMVT 348
Query: 125 FNVLITNLCKIRKTEDALKLFHRM--------------------------GEWGCYPNET 158
+N+L+ LCK + +DA ++FH + +GC PN
Sbjct: 349 YNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGCTPNAV 408
Query: 159 TFVVLIRSLYQ 169
T+ ++IR+L++
Sbjct: 409 TYEIIIRALFK 419
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 10/257 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + + + +++ C KG A R++KD F PDE L+ G+C DG ++A
Sbjct: 316 GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQA 375
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + G ++ YN ++ LC+Q L A +++ EM +G ++ T
Sbjct: 376 MAVFKDGLGKGLRPSIIVYNTLIK---GLCQQG----LILPALQLMNEMAEKGCKPDIWT 428
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I LCK+ DA L GC P+ T+ L+ + +L+ E+++RM
Sbjct: 429 YNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 488
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G + D Y L LC + E +++F M GC P I TY+ ++ L +
Sbjct: 489 SQGM--TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 546
Query: 245 VDKANALFHEAQSRGLA 261
V++A L E +S+GL
Sbjct: 547 VNEAVDLLGEMKSKGLT 563
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 122/256 (47%), Gaps = 11/256 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ +++ LC +G A +++ ++A + PD +++I G C G L +A
Sbjct: 386 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDA 445
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L G+ G + YN ++D CRQ L A +++ M +G+ +V T
Sbjct: 446 NHLIGDAITKGCIPDIFTYNTLVD---GYCRQ----LKLDSAIELVNRMWSQGMTPDVIT 498
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ LCK K+E+ +++F M E GC PN T+ +I SL + ++ E +++ MK
Sbjct: 499 YNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMK 558
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVF-AMMKADGCEPGIKTYDLLMSKLGAHN 243
S G + D ++ +T C + ++ A +F M K TY++++S
Sbjct: 559 SKGL--TPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQL 616
Query: 244 RVDKANALFHEAQSRG 259
+ A LF E + G
Sbjct: 617 NMKMALRLFSEMKKNG 632
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 67/280 (23%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + +++ LC G S A ++ D + + PD + L+ G+C KL+ A
Sbjct: 421 GCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSA 480
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD--------------PFLLH------- 103
L M+ G V+ YN +L+ +C+ + ++ P ++
Sbjct: 481 IELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIES 540
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKI-------------RKTED--- 140
+EA +L EM +G+ +V +F LIT CK+ K D
Sbjct: 541 LCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSH 600
Query: 141 --------------------ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
AL+LF M + GC P+ T+ VLI + + +G + +
Sbjct: 601 TTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFL 660
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
GF SL + + L LC +V+ A+ + +M
Sbjct: 661 LENIEKGFIPSL--TTFGRVLNCLCVEHKVQEAVGIIHLM 698
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 116/259 (44%), Gaps = 10/259 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
+D ++ D + + ++ C G A R+++++ + F + ++ G+ G
Sbjct: 138 KDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDN 197
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ AR L EM V +N ++ +C K F+L E+E++ ++ RGV N
Sbjct: 198 DRARELFDEMLECCLCPDVTTFNKLVHALC-----KKGFVL--ESERLFDKVLKRGVCPN 250
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ TFN+ I LCK + A++L + G P+ T+ +I L + +R+ E +E +
Sbjct: 251 LFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLH 310
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+M + GF + Y + C V A ++ G +P TY L++
Sbjct: 311 KMVNGGFEP--NDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQ 368
Query: 242 HNRVDKANALFHEAQSRGL 260
D+A A+F + +GL
Sbjct: 369 DGDPDQAMAVFKDGLGKGL 387
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 9/202 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK++EA M + V +YNA+++ + E F ++A KV + M + V
Sbjct: 90 GKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVE-------FGYFNQAHKVYMRMKDKKV 142
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+V T+ + I + C+ + AL+L M GC+ N + ++ Y+ + E
Sbjct: 143 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 202
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ D M D + + + LC V + ++F + G P + T+++ +
Sbjct: 203 LFDEMLECCLCP--DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQG 260
Query: 239 LGAHNRVDKANALFHEAQSRGL 260
L +D+A L GL
Sbjct: 261 LCKEGSLDRAVRLLGCVSREGL 282
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 25/270 (9%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERM-----VKDLA-----------RVIFPDEAMCDM 50
+K+ R L V++++ +Y+ M VK++ R + P+ ++
Sbjct: 280 VKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLPLRGVTPNVFSYNI 339
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G C + + EA L EM+ V+YN+++D +C+ R D + +L
Sbjct: 340 MINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKSGRISDVW-------DLL 392
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
VEM G P NV T+N L+ LCK + + A+ L ++ + G PN T+ +L+ L +
Sbjct: 393 VEMHDIGQPANVITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMYTYTILVDGLCKN 452
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
RLE+ E+ + + G+ L+ Y + C + AL + + M+ +GC P
Sbjct: 453 GRLEDAQEIYHDLLTKGY--PLNVSMYNVMVNEFCKEGLFDEALSLLSKMEDNGCTPNAI 510
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY L+ L +N+ DKA L E RGL
Sbjct: 511 TYQTLICALFENNKNDKAVKLLREMIVRGL 540
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL S G+ Y+E +V I P+ + LI G+ + G+++EA L +M
Sbjct: 207 DKLVSDGYDLYSEMIVNK----IHPNVITYNTLIYGFSILGQMKEAVGLLNQMSMKNISP 262
Query: 79 GVVAYNAMLDCVCE-------------LCRQK------------DPFLLHSEAEK---VL 110
V+ + ++D +C+ + +Q+ D + L E K +
Sbjct: 263 DVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLF 322
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ RGV NV ++N++I LCK + +A LF M P+ ++ LI L ++
Sbjct: 323 NTLPLRGVTPNVFSYNIMINGLCKNKMVNEAANLFKEMHSSNMTPDTVSYNSLIDGLCKS 382
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ + +++ M G A++ Y L LC +V+ A+ + +K G +P +
Sbjct: 383 GRISDVWDLLVEMHDIGQPANV--ITYNSLLDALCKNHQVDKAIALLKKIKDQGIQPNMY 440
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L + R++ A ++H+ ++G + Y V
Sbjct: 441 TYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNV 479
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 12/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ + +L +++ C +YA ++ + ++ + P+ LI G C++G++ +A
Sbjct: 84 GIQPNIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 143
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF L V+Y +++ +C+ K L + + +LV+ D V
Sbjct: 144 LYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGLLVKPD-------VVM 196
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I LCK + D L+ M +PN T+ LI +++E ++++M
Sbjct: 197 YNTIIDALCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLIYGFSILGQMKEAVGLLNQMS 256
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S D + + LC V+ A V A+M EP I TY LM
Sbjct: 257 MKNI--SPDVLTFTTLVDGLCKQGEVKKARHVLAVMIKQRVEPDIVTYSSLMDGYFLVKE 314
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVD 270
V+KA LF+ RG VTP ++ +
Sbjct: 315 VNKAKHLFNTLPLRG--VTPNVFSYN 338
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 114/229 (49%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD ++L+ +C +GK++EA+ + M + G + VV Y+A++D C + +
Sbjct: 108 INPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKV---- 163
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++A+ + M GV ++ ++++LI LCKI+ T++A+ LF M P+ T+
Sbjct: 164 ---NKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTY 220
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L + ++ +++D M G D Y L LC +V+ A+ + +
Sbjct: 221 NSLIDGLCKLGKISYALKLVDEMHDRGVPP--DIITYSSILDALCKNHQVDKAIALLTKL 278
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L R+D A+ +F + +G +T Y V
Sbjct: 279 KDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLLVKGYNITVNTYTV 327
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ LC G A ++++ + +++ P M + +I G C D + +A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM V YNA++ C + + KD L +
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDA 121
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EA+ VL M +G+ NV T++ L+ C ++K A +F+ M + G P+
Sbjct: 122 FCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD 181
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
++ +LI L + +E + + M D Y + LC + ++ +ALK+
Sbjct: 182 IHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP--DVVTYNSLIDGLCKLGKISYALKL 239
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M G P I TY ++ L +++VDKA AL + + +G+ Y +
Sbjct: 240 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTI 292
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 10/235 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C + A+ + +A+ + PD +LI G C +EA
Sbjct: 142 GMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEA 201
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ VV YN+++D +C+L + S A K++ EM RGVP ++ T
Sbjct: 202 MNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKI-------SYALKLVDEMHDRGVPPDIIT 254
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ ++ LCK + + A+ L ++ + G PN T+ +LI L + RL++ + + +
Sbjct: 255 YSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLDDAHNIFEDLL 314
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
G+ +++ Y + C + AL + + MK + C P TY++++ L
Sbjct: 315 VKGYNITVN--TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSL 367
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 85/195 (43%), Gaps = 29/195 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ LC A + +++ R I PD + LI G C GK+ A
Sbjct: 177 GVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYA 236
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKD----------PFLLH- 103
+L EM+ G ++ Y+++LD +C+ L + KD L+
Sbjct: 237 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDG 296
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + ++ +G V T+ V+I C ++AL L +M + C+PN
Sbjct: 297 LCKGGRLDDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 356
Query: 157 ETTFVVLIRSLYQAA 171
T+ ++IRSL+
Sbjct: 357 ALTYEIIIRSLFDXT 371
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 129/265 (48%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++ C G + A + K + I PD ++L+ +C DGK++E
Sbjct: 255 GISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G + V YN+++D C L ++ + +A+ + M GV ++++
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYC-LVKEVN------KAKSIFNTMAQGGVNPDIQS 367
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++++I CKI+K ++A+ LF M P+ T+ LI L ++ R+ +++D+M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ + Y L LC I +V+ A+ + +K G +P + TY +L+ L +
Sbjct: 428 DRGVPPTI--RTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGK 485
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
++ A +F +G + Y +
Sbjct: 486 LEDARKVFEGLLVKGHNLNVDTYTI 510
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 116/227 (51%), Gaps = 11/227 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++I G+C K +EA L EM+R VV Y++++D + + R
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI------ 416
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
S A +++ +M RGVP + T+N ++ LCKI + + A+ L ++ + G PN T+ +
Sbjct: 417 -SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L Q+ +LE+ ++ + + G ++D Y + C AL + + M+
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVD--TYTIMIQGFCVEGLFNEALALLSKMED 533
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+GC P KTY++++ L + D A L E +RG V P++ A+
Sbjct: 534 NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG--VRPRQIAI 578
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 125/284 (44%), Gaps = 31/284 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C G +A + + ++ + PD LIKG C+ G++++A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQA 174
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
++ GF ++Y ++ +C +L ++ D L+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+EA + EM +G+ +V T++ LI+ C + K DA+ LF++M P+
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ + + +++EG + D M G + Y + C ++ V A +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF--VTYNSLMDGYCLVKEVNKAKSI 352
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
F M G P I++Y ++++ + D+A LF E + +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++RG+ N+ N+LI C++ A +F ++ + G P+ TF LI+ L
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++++ D++ + GF D+ +Y + LC + AL + + + +P +
Sbjct: 170 QIQQAFLFHDKVVALGF--HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y+ ++ + V++A LF E S+G++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGIS 257
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD ++L+ +C +GK++EA+ + M + G + VV Y+A++D C + +
Sbjct: 108 INPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKV---- 163
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++A+ + M GV ++ ++++LI LCKI+ T++A+ LF M P+ T+
Sbjct: 164 ---NKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIPDVVTY 220
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ ++ +++D M G D Y L LC +V+ A+ + +
Sbjct: 221 NSLIDGLCKSGKISYALKLVDEMHDRGVPP--DIITYSSILDALCKNHQVDKAIALLTNL 278
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L R++ A+ +F + +G +T Y V
Sbjct: 279 KDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 327
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C + A+ + +A+ + PD +LI G C +EA
Sbjct: 142 GMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEA 201
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ VV YN+++D +C+ + S A K++ EM RGVP ++ T
Sbjct: 202 MNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKI-------SYALKLVDEMHDRGVPPDIIT 254
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ ++ LCK + + A+ L + + G PN T+ +LI L + RLE+ + + +
Sbjct: 255 YSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 314
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +++ Y + C + AL + + MK + C P TY++++ L +
Sbjct: 315 VKGYNITVN--TYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEIIIRSLFDKDE 372
Query: 245 VDKANALFHEAQSRGL 260
DKA L E +RGL
Sbjct: 373 NDKAEKLLREMITRGL 388
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 122/293 (41%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ LC G A ++++ + +++ P M + +I G C D + +A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQPSVVMYNTIIDGMCKDKHVNDA 61
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
L EM V YNA++ C + + KD L +
Sbjct: 62 FDLYSEMVSKRISPDVFTYNALISGFCIVGKLKDAIGLFNKMTLENINPDMYTFNILVDA 121
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EA+ VL M +G+ NV T++ L+ C ++K A +F+ M + G P+
Sbjct: 122 FCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPD 181
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
++ +LI L + +E + + M D Y + LC ++ +ALK+
Sbjct: 182 IHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP--DVVTYNSLIDGLCKSGKISYALKL 239
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M G P I TY ++ L +++VDKA AL + +G+ Y +
Sbjct: 240 VDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTI 292
>Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29886574-29887743 | 20130731
Length = 389
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+++ +C + A + ++A + IFPD + LI G+C+ GKL++A L +M
Sbjct: 46 NTIIDGMCKDKHVNDAFDLYSEMASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTS 105
Query: 74 GGFELGVVAYNAMLDCVCELCRQK-------------------------DPFLLHSE--- 105
V +N ++D C+ K D + L +E
Sbjct: 106 KNINPTVYTFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNN 165
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A+ + M RGV NV ++N++I CKI+ T++A+ LF M P+ T+ LI
Sbjct: 166 AKGIFSTMSLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLIN 225
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
L ++ ++ +++D M G D Y L LC +V+ A+ + +K G
Sbjct: 226 GLCKSGKISYALKLVDEMHDR--GQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGI 283
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
P + TY +L+ L R++ A+ +F + +G +T Y V
Sbjct: 284 RPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTV 327
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 31/277 (11%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G A+ ++ + + I P+ L+ G+C+ ++ A+ + M
Sbjct: 114 TFNILVDAFCKEGNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTM 173
Query: 72 YRGGFELGVVAYNAMLDCVCEL--------------CRQKDPFLLH-------------- 103
G V +YN M++ C++ CR+ P ++
Sbjct: 174 SLRGVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKI 233
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
S A K++ EM RG P ++ T++ L+ LCK + + A+ L + + G PN T+ +L
Sbjct: 234 SYALKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLTNLKDQGIRPNMYTYTIL 293
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I L + RLE+ + + + G+ +++ Y + C + AL + + MK +
Sbjct: 294 IDGLCKGGRLEDAHNIFEDLLVKGYNITVN--TYTVMIHGFCNKGLFDEALALLSKMKDN 351
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
C P TY++++ L ++ DKA L E +RGL
Sbjct: 352 SCFPNALTYEIIIRSLFDNDENDKAENLLREMITRGL 388
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 51 LIKGWCVDGK----LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
LI G C G+ LE RR+ G++ + VV YN ++D +C+ D F L+SE
Sbjct: 13 LINGLCKVGETKAALELLRRVDGKLVQPD----VVMYNTIIDGMCKDKHVNDAFDLYSE- 67
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
M + + +V T+N LI+ C + K +DA LF++M P TF +L+ +
Sbjct: 68 ------MASKRIFPDVFTYNALISGFCIVGKLKDATDLFNKMTSKNINPTVYTFNILVDA 121
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+ ++E ++ M G + Y + C + V +A +F+ M G
Sbjct: 122 FCKEGNVKEAKNVLAMMMKQGINP--NAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVT 179
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ +Y+++++ D+A LF E R L
Sbjct: 180 ANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKL 213
>Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:28927923-28926100 | 20130731
Length = 403
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 132/276 (47%), Gaps = 21/276 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMC------DMLIKGWCV- 57
G + + S ++ LC G A ++++ + +++ PD + LI G+C+
Sbjct: 75 GFRFNHVSYGTLINGLCKVGQTRAALQLLRRVDGKLVQPDVGISPEVVTYSALISGFCIL 134
Query: 58 ----DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEM 113
+GK++EA+ + M + GF+ VV Y++++D C L ++ + +A+ + M
Sbjct: 135 AFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYC-LVKEVN------KAKSIFNNM 187
Query: 114 DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARL 173
GV +++++N+LI CKI+ T+ A+ LF M PN T+ LI L ++ ++
Sbjct: 188 AQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKI 247
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYD 233
+++D M G D Y L LC V+ A+ + +K G +P + TY
Sbjct: 248 SYALKLVDEMHDR--GQPPDIITYSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYT 305
Query: 234 LLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+L++ L R + A +F + +G + Y V
Sbjct: 306 ILINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTV 341
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G K + + +++ C + A+ + ++A+ + PD ++LI G+C + A
Sbjct: 156 GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAA 215
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ VV YN+++D +C+ + S A K++ EM RG P ++ T
Sbjct: 216 MNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKI-------SYALKLVDEMHDRGQPPDIIT 268
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ L+ LCK + A+ L ++ + G PN T+ +LI L + R E+ + + +
Sbjct: 269 YSSLLDALCKNHHVDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLL 328
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +++ Y + + C AL + + M+ +GC P TY++++ L +
Sbjct: 329 VKGYNINVN--TYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDE 386
Query: 245 VDKANALFHEAQSRGL 260
DKA L E +RGL
Sbjct: 387 NDKAEKLLLEMITRGL 402
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 8/222 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LIKG C+ G++ +A ++ GF V+Y +++ +C++ + + L
Sbjct: 43 PDAITLTSLIKGLCLKGQIHQALHFHDKLAALGFRFNHVSYGTLINGLCKVGQTRAALQL 102
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITN-----LCKIRKTEDALKLFHRMGEWGCYPNE 157
+ LV+ D G+ V T++ LI+ CK K ++A +F M + G PN
Sbjct: 103 LRRVDGKLVQPDV-GISPEVVTYSALISGFCILAFCKEGKVKEAKNVFAAMMKKGFKPNV 161
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ L+ + + + + M G D ++Y + C I+ + A+ +F
Sbjct: 162 VTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNP--DIQSYNILINGFCKIKMTDAAMNLF 219
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
M P + TY+ L+ L ++ A L E RG
Sbjct: 220 EEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 261
>Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:16349669-16351514 | 20130731
Length = 540
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 25 GFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYN 84
F + E ++K+ I PD ++L+ C +GK++EA+ + M + G E VV YN
Sbjct: 247 AFRLFNEMVMKN----INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYN 302
Query: 85 AMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
++D C + +A+ VL + V N ++N++I CKI+ ++AL L
Sbjct: 303 TLMDGYCLVNEV-------GKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCL 355
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL 204
FH M G P++ T+ LI L +A R+ E++D M + A D Y + +
Sbjct: 356 FHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPA--DIVTYNSLIDVF 413
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
C + V+ A+ + +K G +P + TY++L+ L ++ A +F + +G V
Sbjct: 414 CKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNA 473
Query: 265 KEYAV 269
Y +
Sbjct: 474 WTYNI 478
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 120/284 (42%), Gaps = 43/284 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G+K D +L +++ C G ++A + + ++ G C++GK+ EA
Sbjct: 97 GVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKM-------------GLCLNGKVNEAL 143
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV-------------- 111
+ GF L V Y +++ +C++ + + + + E LV
Sbjct: 144 LFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGL 203
Query: 112 --------------EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
EM + +P V TF+ LI C + K +DA +LF+ M P+
Sbjct: 204 CKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDA 263
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
TF +L+ +L + +++E +I M G ++ Y + C + V A V
Sbjct: 264 YTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTV--VTYNTLMDGYCLVNEVGKAKHVL 321
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+++ P ++Y+++++ VD+A LFHE RG+A
Sbjct: 322 SIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIA 365
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 10/232 (4%)
Query: 30 AERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A+ ++ ++R+ + P+ +++I G+C ++EA L EM G V YN+++D
Sbjct: 317 AKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ R P+ A +++ EM +P ++ T+N LI CK + + A+ L ++
Sbjct: 377 GLCKAGRI--PY-----AWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKI 429
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
E G PN T+ +LI L + +L+ ++ + G+ +++ Y + LC
Sbjct: 430 KEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGY--NVNAWTYNIMINGLCKEG 487
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ A + + M+ +G P TY+ ++ L + +KA L E +GL
Sbjct: 488 LFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGL 539
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ LC G YA +V ++ P D + LI +C + +++A
Sbjct: 363 GIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKA 422
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + YN ++D +C+ + K+ A+ V ++ +G N T
Sbjct: 423 IALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKN-------AQDVFQDLLIKGYNVNAWT 475
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I LCK ++A L +M + G P+ T+ +I++L+ E+ +++ M
Sbjct: 476 YNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMV 535
Query: 185 SAGF 188
G
Sbjct: 536 IKGL 539
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
D + +E +++ +M G VV+YN ++DC C++ L +A +V EM RG
Sbjct: 394 DEQRDEGDQISDQMVSDGLISNVVSYNMLIDCFCKVS-------LMDKASEVFSEMQLRG 446
Query: 118 VPRNVETFNVLITN-----------------------------------LCKIRKTEDAL 142
N+ TFN LI LC++++TE+A
Sbjct: 447 FTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAF 506
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
+ F+ M EWG PN + +LIRSL +++ RM+ G S D +Y +
Sbjct: 507 ECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGI--SPDIYSYNALIQ 564
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
I C + +VE A K+F M G P TY ++ L R+++A +F+ ++ G
Sbjct: 565 IFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYSMEANG--C 622
Query: 263 TPKEY 267
+P Y
Sbjct: 623 SPDSY 627
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 22/259 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + S ++++ C A + ++ R P+ + LI G C DG + +A
Sbjct: 411 GLISNVVSYNMLIDCFCKVSLMDKASEVFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKA 470
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R L + + + ++ ++D +C L R ++ F + EM GV N
Sbjct: 471 RELLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAF-------ECFNEMVEWGVNPNAII 523
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI +LC I +T ++KL RM E G P+ ++ LI+ + ++E+ ++ D M
Sbjct: 524 YNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMS 583
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+GF D Y F+ L R+E A K+F M+A+GC P +++R
Sbjct: 584 KSGFNP--DNYTYSAFIAALSESGRLEEAKKMFYSMEANGCSP------------DSYDR 629
Query: 245 VDKANALFHEAQSRGLAVT 263
V++A + + +G+A+
Sbjct: 630 VEEAQKIVERCRQKGIALN 648
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 110/280 (39%), Gaps = 50/280 (17%)
Query: 28 SYAERMV----KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
S A+ MV K LAR PD ++ ++++ +L EA + + G + G+ Y
Sbjct: 325 SMAKEMVVFIRKALARGYVPDSSVFNVIMACLVKRAELREACEIFEIFTKRGVKPGIGTY 384
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
+ + + + Q+D E +++ +M G+ NV ++N+LI CK+ + A +
Sbjct: 385 LTLAEALYKD-EQRD------EGDQISDQMVSDGLISNVVSYNMLIDCFCKVSLMDKASE 437
Query: 144 LFHRMGEWGCYPNETTFVVLIR-----------------------------------SLY 168
+F M G PN TF LI L
Sbjct: 438 VFSEMQLRGFTPNLVTFNTLINGHCKDGAIIKARELLEMLLENRLKPDIFTFSCIIDGLC 497
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ R EE E + M +G + + Y + LC I ++K+ M+ +G P
Sbjct: 498 RLKRTEEAFECFNEM--VEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPD 555
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
I +Y+ L+ N+V+KA LF G P Y
Sbjct: 556 IYSYNALIQIFCRMNKVEKAKKLFDSMSKSGF--NPDNYT 593
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 44 DEAMCDMLIKGWCVDGKLEEAR---RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
++ +C +L+ W G+L AR + G++ G YN+++D L +
Sbjct: 134 EDLLC-VLMSSW---GRLGLARYCVDVFGQISFLGISPTTRLYNSLID---ALVKSNSID 186
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L +S+ ++++ + + P + T+NVLI +CKI ++AL+L +M + G +PN T+
Sbjct: 187 LAYSKFQQMVGDHCF---PDRI-TYNVLIHGVCKIGVVDEALRLIRQMKDKGLFPNVFTY 242
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSA 186
+LI A R++E ++D MK +
Sbjct: 243 TILIDGFCNAKRVDEAFGVLDMMKES 268
>Medtr3g114700.1 | PPR containing plant-like protein | HC |
chr3:53562677-53565345 | 20130731
Length = 530
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 9/243 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
DYG K D+ S +V+ LC K AS AE L PD + L+ GWC G + +
Sbjct: 206 DYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAK 265
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + +M G + V Y+ ++D +C C Q + A V EM G N
Sbjct: 266 AEEVFSDMKEAGVKPNVYTYSIVIDSLCR-CGQI------TRAHDVFSEMIDAGCDPNAV 318
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN L+ K +TE L+++++M GC + ++ LI S + L+E +++D M
Sbjct: 319 TFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTM 378
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G + + + + V A +++A MK C P TY++LM
Sbjct: 379 VKKGVAP--NASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSK 436
Query: 244 RVD 246
+D
Sbjct: 437 SID 439
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 10/185 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF YN M+D +L R D A ++ M RGV V TF+VL+ +
Sbjct: 138 GFPSSPEPYNEMIDLAGKL-RHFD------LAWHLIDLMKSRGVRITVSTFSVLVRRYVR 190
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+A+ F+RM ++GC P++ +F ++I SL + R E + D +K D
Sbjct: 191 AGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHK---FEPDV 247
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + C + A +VF+ MK G +P + TY +++ L ++ +A+ +F E
Sbjct: 248 IVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSE 307
Query: 255 AQSRG 259
G
Sbjct: 308 MIDAG 312
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
YG + D +++ LC G A + +D+ P L+ GWC +GKL EA
Sbjct: 213 YGCEVDEYVFGCLLDALCKNGSVKEAASLFEDMRYKFTPTVKHFTSLLYGWCKEGKLVEA 272
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + +M G E +V +N +L + + D + L L EM +G N +
Sbjct: 273 KHVLVQMKDAGIEPDIVVFNNLLGGYAQAGKMGDAYDL-------LKEMRRKGCEPNAAS 325
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ VLI +LCK K E+A+++F M GC + T+ LI + +++ G E++D+MK
Sbjct: 326 YTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYELLDQMK 385
Query: 185 SAG---------------------------------FGASLDKKAYYQFLTILCGIERVE 211
G G D Y + + C + V+
Sbjct: 386 QEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLACKLGEVK 445
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
++++ M+A G PGI T+ ++++ + +A F E RGL P+
Sbjct: 446 QGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGLFAAPQ 499
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 29/255 (11%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ A +LI+ C KLEEA R+ EM R G ++ V+ Y ++ C+ + K + L
Sbjct: 321 PNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGCQMDVITYTTLISGFCKWGKIKRGYEL 380
Query: 103 --------HS--------------------EAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
HS E +++ EM G ++ +N++I CK
Sbjct: 381 LDQMKQEGHSPNQLTYMHIMVAHEKKEELEECMELVNEMQKIGCVPDLNIYNIVIRLACK 440
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+ + + ++L++ M G P TFV++I + L E E M G A+
Sbjct: 441 LGEVKQGVRLWNEMEASGLNPGIDTFVIMINGFLEQECLVEACEFFKEMVGRGLFAAPQY 500
Query: 195 KAYYQFLTILCGIERVEHALKVFA-MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
+ + L E++E A ++ + + GCE + + + + L + V +A +
Sbjct: 501 GTLKELMNSLLRAEKLEMAKDTWSCITSSKGCEMNVGAWTIWIHALFSKGHVKEACSFCI 560
Query: 254 EAQSRGLAVTPKEYA 268
+ L P +A
Sbjct: 561 DMMDNDLMPQPDTFA 575
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 114/221 (51%), Gaps = 9/221 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++I G+C K +EA L EM+R VV Y++++D + + R
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI------ 416
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
S A +++ +M RGVP N+ T+N ++ LCK + + A+ L + + G P+ +T+ +
Sbjct: 417 -SYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L Q+ +LE+ ++ + + G+ +LD AY + C AL + + M+
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGY--NLDVYAYTIMIQGFCVEGLFNEALALLSKMED 533
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
+GC P KTY++++ L + D A L E +RGL +
Sbjct: 534 NGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++ C G + K + I PD ++L+ +C DGK++E
Sbjct: 255 GISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEG 314
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G + V YN+++D C L ++ + +A+ + M GV ++++
Sbjct: 315 KTVFDMMMKQGIKPNFVTYNSLMDGYC-LVKEVN------KAKSIFNTMAQGGVNPDIQS 367
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++++I CKI+K ++A+ LF M P+ T+ LI L ++ R+ +++D+M
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y L LC +V+ A+ + K G +P I TY +L+ L +
Sbjct: 428 DRGVPPNI--CTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGK 485
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
++ A +F + +G + Y +
Sbjct: 486 LEDARKVFEDLLVKGYNLDVYAYTI 510
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 125/284 (44%), Gaps = 31/284 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C G +A + + ++ + PD L KG C+ G++++A
Sbjct: 115 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQA 174
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
++ GF ++Y ++ +C +L ++ D L+
Sbjct: 175 FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+EA + EM +G+ +V T++ LI+ C + K +DA+ LF++M P+
Sbjct: 235 MCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPD 294
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ + + +++EG + D M G + Y + C ++ V A +
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF--VTYNSLMDGYCLVKEVNKAKSI 352
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
F M G P I++Y ++++ + D+A LF E + +
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++RG+ N+ N+LI C++ A +F ++ + G P+ TF L + L
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKG 169
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++++ D++ + GF D+ +Y + LC + AL + + + +P +
Sbjct: 170 QIQQAFLFHDKVVALGF--HFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y+ ++ + V++A LF E S+G++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGIS 257
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + ++++ C + A+ + ++ R + P+ ++I G+C K++EA
Sbjct: 312 GIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEA 371
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ VV YN+++D +C+L + S A K++ EM RGVP + T
Sbjct: 372 MNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKI-------SYALKLVDEMHDRGVPHDKIT 424
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N ++ LCK + + A+ L +M + G P+ T+ L+ L + RLE+ + + +
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ LD Y + C + +L + + M+ +GC P TY++++ L +
Sbjct: 485 VKGY--ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDE 542
Query: 245 VDKANALFHEAQSRGL 260
DKA L E +RGL
Sbjct: 543 NDKAEKLLREMITRGL 558
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ LIKG C+ G++ +A + ++ GF L V+Y +++ +C++ +
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQT------ 193
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
S A ++L +D + V NV +N +I ++CK++ +A L+ M G P+ T+
Sbjct: 194 -SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNA 252
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL---CGIERVEHALKVFAM 219
LI ++++ ++ ++M ++ Y F ++ C R++ A V AM
Sbjct: 253 LISGFCIVGKMKDATDLFNKMIFENINPNV-----YTFNILVDGFCKERRLKEAKNVLAM 307
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M G +P + TY+ LM + V+KA +F+ RG+ Y++
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 48/284 (16%)
Query: 20 KLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
KL ++ F Y+E + K ++ PD + LI G+C+ GK+++A L +M
Sbjct: 226 KLVNEAFDLYSEMVSKGIS----PDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPN 281
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN------------- 126
V +N ++D C+ R K EA+ VL M +G+ +V T+N
Sbjct: 282 VYTFNILVDGFCKERRLK-------EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVN 334
Query: 127 ----------------------VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
++I CKI+K ++A+ LF M P+ T+ LI
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
L + ++ +++D M G DK Y L LC +V+ A+ + MK +G
Sbjct: 395 DGLCKLGKISYALKLVDEMHDR--GVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+P I TY L+ L + R++ A +F + +G + Y
Sbjct: 453 IQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYT 496
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++ G+ ++ ++LI ++ + + + ++ + G PN T LI+ L
Sbjct: 97 QMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKG 156
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ + + D++ + GF L+K +Y + LC + + AL++ + +P +
Sbjct: 157 QIHQALQFHDKVVALGF--HLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVM 214
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y+ ++ + V++A L+ E S+G++
Sbjct: 215 YNTIIDSMCKVKLVNEAFDLYSEMVSKGIS 244
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C G +A + + ++ + P+ LIKG C+ G++ +A
Sbjct: 117 GIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF+ ++Y ++D +C++ + A +L +D + V NV
Sbjct: 177 LNFHDKLVALGFQFNQISYGTLIDGLCKVGETR-------AALDLLRRVDGKLVQPNVVM 229
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I +CK + DA L+ M G PN T+ LI + +L++ ++ ++M
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S D + + + C ++ +ALK+ M G P I TY ++ L +R
Sbjct: 290 SENIKP--DVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHR 347
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VDKA AL + + +G+ Y +
Sbjct: 348 VDKAVALLTKLKDQGIRPNMHTYTI 372
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+K + F Y+E + K ++ P+ LI G+ GKL++A L +M +
Sbjct: 240 DKHVNDAFDLYSEMVSKGIS----PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKP 295
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V +N ++D C+ + S A K++ EM RG P N+ T++ ++ LCK +
Sbjct: 296 DVYTFNILVDVFCKSGKI-------SYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
+ A+ L ++ + G PN T+ +LI L + +LE+ + + + G+ ++ Y
Sbjct: 349 DKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITV--VTYI 406
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
C + A + + M+ +GC P KTY+L+ L D A L E +
Sbjct: 407 VMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + ++ S +++ LC G A +++ + +++ P+ M +I G C D + +A
Sbjct: 187 GFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDA 246
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G VV Y+A++ + + KD A + +M + +V T
Sbjct: 247 FDLYSEMVSKGISPNVVTYSALISGFFTVGKLKD-------AVDLFNKMISENIKPDVYT 299
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+L+ CK K ALKL M + G PN T+ ++ +L + R+++ ++ ++K
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y + LC ++E A +F + G + + TY ++
Sbjct: 360 DQGIRPNM--HTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGL 417
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
D+A+AL + + G K Y
Sbjct: 418 FDEASALLSKMEENGCIPDAKTY 440
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 2/157 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++RG+ N+ N+LI C++ A +F ++ + G PN TF LI+ L
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKG 171
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ + D++ + GF ++ +Y + LC + AL + + +P +
Sbjct: 172 QIHQALNFHDKLVALGF--QFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVM 229
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y ++ + V+ A L+ E S+G++ Y+
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYS 266
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 9/221 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++LI G C DG + +AR + + + ++ ++D +C L R ++ F
Sbjct: 8 PNLVTFNILINGHCKDGAIIKAREPLEMLLENRLKPDIFTFSCIIDGLCRLKRTEEAF-- 65
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ EM GV N +N+LI +LC I +T ++KL RM E G P+ ++
Sbjct: 66 -----ECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGISPDIYSYNA 120
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ + ++E+ ++ D M +GF D Y F+ L R+E A K+F ++A
Sbjct: 121 LIQIFCRMNKVEKAKKLFDSMSKSGFNP--DNYTYSAFIAALSESGRLEEAKKMFYSIEA 178
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
+GC P +L++ L H+RV++A + + +G+A+
Sbjct: 179 NGCSPDSYVCNLVIKALVRHDRVEEAQKIVERCRQKGIALN 219
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF +V +N +++ C KD ++ + E + + ++ R P ++ TF+ +I LC+
Sbjct: 5 GFTPNLVTFNILINGHC-----KDGAIIKAR-EPLEMLLENRLKP-DIFTFSCIIDGLCR 57
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+++TE+A + F+ M EWG PN + +LIRSL +++ RM+ G S D
Sbjct: 58 LKRTEEAFECFNEMVEWGVNPNAIIYNILIRSLCSIGETTRSVKLLRRMQEEGI--SPDI 115
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+Y + I C + +VE A K+F M G P TY ++ L R+++A +F+
Sbjct: 116 YSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALSESGRLEEAKKMFYS 175
Query: 255 AQSRGLAVTPKEYAVD 270
++ G +P Y +
Sbjct: 176 IEANG--CSPDSYVCN 189
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 9/219 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ +L+ +C DGK +EA+ + + + G + VV YN+++D C L +Q +
Sbjct: 271 INPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYC-LVKQVN-- 327
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+AE +L M RGV +V++++++I CKI+ ++A+ LF M P+ T+
Sbjct: 328 ----KAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQGRQLVPDTITY 383
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ + E++ M G ++ Y L LC V+ A+ +
Sbjct: 384 SSLIDGLCKSGRISDAWELVSEMSDRGQQPNI--ITYNSLLNALCQNHHVDKAIALLRKF 441
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
K G +P + TY +L+ L R+ A +F + +G
Sbjct: 442 KTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKG 480
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 13/251 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + F Y+E +A+ IFPD + LI G+CV G+L++A L +M
Sbjct: 218 DKLVNDAFNLYSEM----IAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKMILENINP 273
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V + ++D C+ + K EA+ V+ + GV NV T+N LI C +++
Sbjct: 274 NVYTMSILVDAFCKDGKPK-------EAKAVVAVLMKNGVKPNVVTYNSLIDGYCLVKQV 326
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
A + + M + G + ++ ++I + ++E ++ M+ G D Y
Sbjct: 327 NKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDLFKEMQ--GRQLVPDTITYS 384
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC R+ A ++ + M G +P I TY+ L++ L ++ VDKA AL + +++
Sbjct: 385 SLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNALCQNHHVDKAIALLRKFKTQ 444
Query: 259 GLAVTPKEYAV 269
G+ T Y +
Sbjct: 445 GIQPTLCTYTI 455
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C + AE ++ +A R + D ++I G+C ++EA
Sbjct: 305 GVKPNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEA 364
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + Y++++D +C+ R D A +++ EM RG N+ T
Sbjct: 365 IDLFKEMQGRQLVPDTITYSSLIDGLCKSGRISD-------AWELVSEMSDRGQQPNIIT 417
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ LC+ + A+ L + G P T+ +LI+ L + RL++ + +
Sbjct: 418 YNSLLNALCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLL 477
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +LD Y + C + AL + + MK +GC P KTY++++ L +
Sbjct: 478 IKGY--NLDVYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKKDE 535
Query: 245 VDKANALFHEAQSRGL 260
D A L E RGL
Sbjct: 536 NDMAEKLLREMIRRGL 551
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + ++ +++ C G + + + ++ + P+ + +IKG C+ G++ EA
Sbjct: 95 GVASNLITMSILINCFCHLGQNPLSFSVFAKILKMGYEPNVIILTTIIKGLCLKGEVREA 154
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF+L V+Y A+++ +C++ + A ++L +D + V NV
Sbjct: 155 LHFHDKVVAQGFQLNQVSYGALINGLCKVGETR-------AALELLRRVDGKIVQPNVVM 207
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ ++I +CK + DA L+ M +P+ T+ LI +L++ ++ +M
Sbjct: 208 YTMIIDGMCKDKLVNDAFNLYSEMIAKRIFPDVVTYNNLISGFCVVGQLKDAIGLLHKM- 266
Query: 185 SAGFGASLDKKAYYQFLTI--LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+++ Y + + C + + A V A++ +G +P + TY+ L+
Sbjct: 267 ---ILENINPNVYTMSILVDAFCKDGKPKEAKAVVAVLMKNGVKPNVVTYNSLIDGYCLV 323
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+V+KA + + RG+ + Y++
Sbjct: 324 KQVNKAEVILNTMAQRGVIADVQSYSI 350
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 10/242 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D S +V LC +G YA ++V+ + FP + + L+KG C+ GKL ++
Sbjct: 133 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 192
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ + + G VV Y+ +++ + R D EA K+L ++ +G N+ +
Sbjct: 193 MQILDRLIKKGLVPNVVTYSILIEAAYKE-RGVD------EAMKLLDDIIAKGGKPNLVS 245
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NVL+T LCK +TEDA+KLF + E G P + +L+RSL R +E E++ M
Sbjct: 246 YNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMD 305
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G S+ Y +T L R+E A KV M G + +Y+ ++++L R
Sbjct: 306 RDGQAPSV--VTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGR 363
Query: 245 VD 246
VD
Sbjct: 364 VD 365
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ L+ C GK +A R+ M G +Y +++ LCR+ +
Sbjct: 101 PEVTQATQLLYDLCRSGKARKAVRVMEIMVSSGIIPDAASYTFLVN---YLCRRGNV--- 154
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A +++ +M+ G P N T+N L+ LC K ++++ R+ + G PN T+ +
Sbjct: 155 -GYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSI 213
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + Y+ ++E +++D + + G +L +Y LT LC R E A+K+F +
Sbjct: 214 LIEAAYKERGVDEAMKLLDDIIAKGGKPNL--VSYNVLLTGLCKEGRTEDAIKLFKELPE 271
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P + ++++L+ L R D+A L G A + Y V
Sbjct: 272 KGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNV 318
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 34/278 (12%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S +++ LC +G A ++ + R P ++LI +DG++E+A ++ EM
Sbjct: 280 SHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLDEM 339
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQ-----------KDPFLLHSEAEKVLVEMDYRGVPR 120
+ GF++ +YN ++ +C+ R F L+ + + RG+ +
Sbjct: 340 TKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALLCERGMVK 399
Query: 121 NVETFNVL------------------ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
E F +L IT LC+ T A ++ + M G P+ T+
Sbjct: 400 --EAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTPDSYTYSS 457
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LIR + + L+E ++ ++ G+ +D Y + LC +R++ ++++F MM
Sbjct: 458 LIRGMCREGMLDEALQIFGILEEHGYVPHVDN--YNALILGLCKSQRIDMSIEIFQMMVN 515
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GC P TY++L+ L ++ A L +E +G+
Sbjct: 516 KGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGV 553
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 9/222 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + P+ +++I G C + ++EA L EM+ V YN+++D +C+L R D
Sbjct: 314 RGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSD 373
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+ + EM RG P ++ T+N L LCK + + A+ L ++ + G P+
Sbjct: 374 VW-------DFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMY 426
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
++ +L L + RLE+ E+ + G+ LD K Y + LC + AL + +
Sbjct: 427 SYTILFVGLCKNGRLEDAQEVYRDLTIKGY--HLDAKMYTVMINGLCKEGFFDEALSLLS 484
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
MK +GC P TY++++ L +R DKA E +RGL
Sbjct: 485 KMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL S G+ Y+E +V I P+ + LI G+ + G+++EA GE+ + + L
Sbjct: 221 DKLVSDGYDLYSEMIVNK----IHPNVITYNTLIYGFSILGQMKEA---VGEVKKARYVL 273
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVLITNLCKI 135
V+ + + D + L E K + + RGV NV ++N++I LCK
Sbjct: 274 AVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKN 333
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ ++A+ LF M PN T+ LI L + R+ + + ID M G D
Sbjct: 334 KMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDR--GQPTDII 391
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y LC +V+ A+ + +K G +P + +Y +L L + R++ A ++ +
Sbjct: 392 TYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDL 451
Query: 256 QSRGLAVTPKEYAV 269
+G + K Y V
Sbjct: 452 TIKGYHLDAKMYTV 465
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D +L +++ C +YA ++ + ++ + P+ LI G C++G++ +A
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 157
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF L V+Y +++ +C+ K L + + LV+ D V
Sbjct: 158 LYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPD-------VVM 210
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I LCK + D L+ M +PN T+ LI Y + L + E + +K
Sbjct: 211 YNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLI---YGFSILGQMKEAVGEVK 267
Query: 185 SAGFGASL--------DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
A + ++ D Y + ++ V A +F + G P + +Y++++
Sbjct: 268 KARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMI 327
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ L + VD+A LF E S+ + Y
Sbjct: 328 NGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +++ LC A + K++ ++ + P+ + LI G C G++ +
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKDPFLLHS---------- 104
EM+ G ++ YN++ D +C+ L + KD + S
Sbjct: 375 WDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A++V ++ +G + + + V+I LCK ++AL L +M + GC P+
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPD 494
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
T+ ++IR+L+++ R ++ + I M + G
Sbjct: 495 GVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 9/222 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + P+ +++I G C + ++EA L EM+ V YN+++D +C+L R D
Sbjct: 314 RGVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSD 373
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+ + EM RG P ++ T+N L LCK + + A+ L ++ + G P+
Sbjct: 374 VW-------DFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMY 426
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
++ +L L + RLE+ E+ + G+ LD K Y + LC + AL + +
Sbjct: 427 SYTILFVGLCKNGRLEDAQEVYRDLTIKGY--HLDAKMYTVMINGLCKEGFFDEALSLLS 484
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
MK +GC P TY++++ L +R DKA E +RGL
Sbjct: 485 KMKDNGCTPDGVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 12/254 (4%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL S G+ Y+E +V I P+ + LI G+ + G+++EA GE+ + + L
Sbjct: 221 DKLVSDGYDLYSEMIVNK----IHPNVITYNTLIYGFSILGQMKEA---VGEVKKARYVL 273
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVLITNLCKI 135
V+ + + D + L E K + + RGV NV ++N++I LCK
Sbjct: 274 AVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMINGLCKN 333
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ ++A+ LF M PN T+ LI L + R+ + + ID M G D
Sbjct: 334 KMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDVWDFIDEMHDR--GQPTDII 391
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y LC +V+ A+ + +K G +P + +Y +L L + R++ A ++ +
Sbjct: 392 TYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDL 451
Query: 256 QSRGLAVTPKEYAV 269
+G + K Y V
Sbjct: 452 TIKGYHLDAKMYTV 465
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 19/271 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D +L +++ C +YA ++ + ++ + P+ LI G C++G++ +A
Sbjct: 98 GIQPDIVTLSILINSFCHLNQLNYAFSILGKILKLGYQPNTVTLTTLINGLCLNGQIRKA 157
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF L V+Y +++ +C+ K L + + LV+ D V
Sbjct: 158 LYFHDHVIAKGFHLNHVSYGILINGLCKSGETKAALQLLEKIKGFLVKPD-------VVM 210
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I LCK + D L+ M +PN T+ LI Y + L + E + +K
Sbjct: 211 YNTIIDFLCKDKLVSDGYDLYSEMIVNKIHPNVITYNTLI---YGFSILGQMKEAVGEVK 267
Query: 185 SAGFGASL--------DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
A + ++ D Y + ++ V A +F + G P + +Y++++
Sbjct: 268 KARYVLAVMIKQRVEPDIVTYSSLMDGYFLVKEVNKAKHLFNTLSLRGVTPNVFSYNIMI 327
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ L + VD+A LF E S+ + Y
Sbjct: 328 NGLCKNKMVDEAVNLFKEMHSKDMIPNTVTY 358
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +++ LC A + K++ ++ + P+ + LI G C G++ +
Sbjct: 315 GVTPNVFSYNIMINGLCKNKMVDEAVNLFKEMHSKDMIPNTVTYNSLIDGLCKLGRVSDV 374
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE----------LCRQKDPFLLHS---------- 104
EM+ G ++ YN++ D +C+ L + KD + S
Sbjct: 375 WDFIDEMHDRGQPTDIITYNSLFDGLCKNHQVDRAIALLKKIKDQGIQPSMYSYTILFVG 434
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A++V ++ +G + + + V+I LCK ++AL L +M + GC P+
Sbjct: 435 LCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGLCKEGFFDEALSLLSKMKDNGCTPD 494
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
T+ ++IR+L+++ R ++ + I M + G
Sbjct: 495 GVTYEIIIRALFESDRNDKAVKFIREMIARGL 526
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 129/275 (46%), Gaps = 20/275 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-----------FASYAERMVKDLARVIFPDEAMCDMLIKG 54
G K + +L +++ LC G + K + I PD +L+ G
Sbjct: 127 GYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDG 186
Query: 55 WCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD 114
+C +G+++EA+ + M G + GVV YN+++D L +Q + +A+ + M
Sbjct: 187 FCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF-LVKQVN------KAKSIFNTMA 239
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
GV +++++++LI CKI+ ++A++L M PN T+ LI L ++ ++
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
+++D M G ++ Y L LC +V++A+ + MK G +P + TY +
Sbjct: 300 YALKLVDEMHDRGQPPNI--VTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTI 357
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L+ L +++ A +F + +G + Y V
Sbjct: 358 LIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTV 392
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 110/211 (52%), Gaps = 10/211 (4%)
Query: 30 AERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A+ + +A++ + PD +LI G+C ++EA L EM+ VV Y++++D
Sbjct: 231 AKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLID 290
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ + S A K++ EM RG P N+ T++ ++ LCK + ++A+ L +M
Sbjct: 291 GLCKSGKI-------SYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
G PN T+ +LI+ L Q+ +LE+ ++ + + G +L+ Y + C
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVK--GHNLNVYTYTVMIQGFCDKG 401
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ AL + + M+ +GC P KTY++++ L
Sbjct: 402 LFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 43/219 (19%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C A ++K++ + I P+ LI G C GK+ A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM+ G +V Y+++LD +C+ Q D A +L +M +G+ N+ T
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCK-NHQVD------NAIALLTQMKNQGIQPNMYT 354
Query: 125 FNVLITNLCKIRKTEDALKLFH-----------------------------------RMG 149
+ +LI LC+ K EDA K+F +M
Sbjct: 355 YTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKME 414
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
+ GC PN T+ ++I SL++ E ++++ M F
Sbjct: 415 DNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNF 453
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++RG+ N+ N+LI + C++ A + ++ + G PN T LI+ L
Sbjct: 87 KMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG 146
Query: 172 RLEEGDEMIDRMKSAG--FGASLDKKA---YYQFLTIL----CGIERVEHALKVFAMMKA 222
++ + ++ ++K A F + + Y F TIL C RV+ A V AMM
Sbjct: 147 KIHDKHCIVGKLKDAVDLFNKMILENINPDVYTF-TILVDGFCKEGRVKEAKNVLAMMMI 205
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +PG+ TY+ LM +V+KA ++F+ G++ + Y++
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSI 252
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
L+ +M G + +V N +++ C+L F VL ++ G N T N
Sbjct: 84 LSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAF-------SVLTKILKMGYKPNTITLN 136
Query: 127 VLITNLC---KIR-------KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
LI LC KI K +DA+ LF++M P+ TF +L+ + R++E
Sbjct: 137 TLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEA 196
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCG---IERVEHALKVFAMMKADGCEPGIKTYD 233
++ M G K + +++ G +++V A +F M G P I++Y
Sbjct: 197 KNVLAMMMIQGI-----KPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYS 251
Query: 234 LLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+L++ +D+A L E + + Y+
Sbjct: 252 ILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYS 286
>Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:21161413-21160178 | 20130731
Length = 411
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL F Y+E +A IFP+ + LI G+C+ G++++A L EM
Sbjct: 77 DKLVIDAFDLYSEM----VAMRIFPNVVTYNTLIYGFCIVGQMKQAIDLLNEMLLKNISP 132
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
VV +N ++D +C+ K D + L E K V
Sbjct: 133 NVVTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVF 192
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M RGV NV ++ V+I LCK + ++A+ LF M P+ T+ LI L +
Sbjct: 193 NTMVRRGVTSNVHSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKY 252
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ + ++++ M + G A D Y L LC +V+ A+ +F +K G +P I
Sbjct: 253 GRISDAWDLVNEMHNRGQPA--DVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIY 310
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L + R+ A ++ +G + + Y V
Sbjct: 311 TYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDVRMYTV 349
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 9/211 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I G C + ++EA L EM+ +V YN+++D + + R S+A +
Sbjct: 209 VMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRI-------SDAWDL 261
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ EM RG P +V T+N L+ LCK + + A+ LF ++ + G P T+ +L+ L +
Sbjct: 262 VNEMHNRGQPADVITYNSLLDALCKNHQVDMAITLFTKIKDQGIQPYIYTYTILVDGLCK 321
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
RL++ E+ + G+ LD + Y + LC + AL + + MK +GC P
Sbjct: 322 NGRLKDAQEVYQILLIKGY--HLDVRMYTVMINGLCKESLFDKALSLLSKMKDNGCTPNP 379
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
T+++L+ L ++ DKA L + R L
Sbjct: 380 VTFEILIRALFENDMNDKAVELLRKMIVRDL 410
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
+KG C++GK++EA ++ F+L V+Y ++D +C+ + A +VL
Sbjct: 1 MKGLCLNGKVKEALYFHDDVIAKEFQLNQVSYGTLIDGLCKAGETR-------AAMQVLR 53
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+D V NV ++ +I +LCK + DA L+ M +PN T+ LI
Sbjct: 54 NIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSEMVAMRIFPNVVTYNTLIYGFCIVG 113
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++++ ++++ M ++ + + LC ++ A KV A M G E + T
Sbjct: 114 QMKQAIDLLNEMLLKNISPNV--VTFNTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVT 171
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
Y LM V+KA +F+ RG+ Y V
Sbjct: 172 YSFLMDGYFLVKEVNKATFVFNTMVRRGVTSNVHSYTV 209
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 10/254 (3%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
+ ++ S +++ LC G A ++++++ ++ P+ M +I C D + +A
Sbjct: 25 FQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAF 84
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L EM VV YN ++ C + + K +A +L EM + + NV TF
Sbjct: 85 DLYSEMVAMRIFPNVVTYNTLIYGFCIVGQMK-------QAIDLLNEMLLKNISPNVVTF 137
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N L+ LCK + + A K+ M + G N T+ L+ + + + + + M
Sbjct: 138 NTLVDGLCKEGEMKKARKVLAFMIKQGVELNVVTYSFLMDGYFLVKEVNKATFVFNTMVR 197
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G +++ +Y + LC + V+ A+ +F M P I TY+ L+ L + R+
Sbjct: 198 RGVTSNV--HSYTVMINGLCKNKMVDEAVNLFKEMHLKNMAPDIVTYNSLIDGLLKYGRI 255
Query: 246 DKANALFHEAQSRG 259
A L +E +RG
Sbjct: 256 SDAWDLVNEMHNRG 269
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 122/242 (50%), Gaps = 10/242 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D S +V LC +G YA ++V+ + FP + + L+KG C+ GKL ++
Sbjct: 8 GIIPDAASYTFLVNYLCRRGNVGYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQS 67
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ + + G VV Y+ +++ + R D EA K+L ++ +G N+ +
Sbjct: 68 MQILDRLIKKGLVPNVVTYSILIEAAYKE-RGVD------EAMKLLDDIIAKGGKPNLVS 120
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NVL+T LCK +TEDA+KLF + E G P + +L+RSL R +E E++ M
Sbjct: 121 YNVLLTGLCKEGRTEDAIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMD 180
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G S+ Y +T L R+E A KV M G + +Y+ ++++L R
Sbjct: 181 RDGQAPSV--VTYNVLITSLSIDGRIEQAFKVLDEMTKSGFKVSANSYNPIIARLCKEGR 238
Query: 245 VD 246
VD
Sbjct: 239 VD 240
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 34/285 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G K S +++ LC +G A ++ + R P ++LI +DG++E+A
Sbjct: 148 GFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQA 207
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC-----ELCRQ------KDPFLLHSEAEKVLVEM 113
++ EM + GF++ +YN ++ +C +L Q F L+ + +
Sbjct: 208 FKVLDEMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMINRRFHLNGGTYNAIALL 267
Query: 114 DYRGVPRNVETFNVL------------------ITNLCKIRKTEDALKLFHRMGEWGCYP 155
RG+ + E F +L IT LC+ T A ++ + M G P
Sbjct: 268 CERGMVK--EAFLILERLGKKQNYPISDFYKNVITLLCRKGNTYPAFQILYEMTVHGFTP 325
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
+ T+ LIR + + L+E ++ ++ G+ +D Y + LC +R++ +++
Sbjct: 326 DSYTYSSLIRGMCREGMLDEALQIFGILEEHGYVPHVDN--YNALILGLCKSQRIDMSIE 383
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+F MM GC P TY++L+ L ++ A L +E +G+
Sbjct: 384 IFQMMVNKGCMPNEMTYNILVEALAFEEEMELAATLLNELYLKGV 428
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
LCR+ + A +++ +M+ G P N T+N L+ LC K ++++ R+ + G
Sbjct: 23 LCRRGNV----GYAMQLVEKMEANGFPTNTVTYNTLVKGLCMYGKLNQSMQILDRLIKKG 78
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
PN T+ +LI + Y+ ++E +++D + + G +L +Y LT LC R E
Sbjct: 79 LVPNVVTYSILIEAAYKERGVDEAMKLLDDIIAKGGKPNL--VSYNVLLTGLCKEGRTED 136
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
A+K+F + G +P + ++++L+ L R D+A L G A + Y V
Sbjct: 137 AIKLFKELPEKGFKPCVVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNV 193
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 131/274 (47%), Gaps = 25/274 (9%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERM-----VKDLARVIFP-----------DEA 46
+D +K+ R L V++++ A+Y+ M VK++ + + D
Sbjct: 277 KDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVFNTIARRGVALDVQ 336
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
++I G+C + ++EA L EM+ V YN+++D +C+L R S+A
Sbjct: 337 SYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKLGRM-------SDA 389
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+ EM RG P N+ T++ L+ LCK + + A+ L ++ G + T+ +L+
Sbjct: 390 WDFIDEMHDRGQPANIITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIYTYTILVDG 449
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
L + +L + E+ + + + LD + Y + LC + AL + + M+ +GC
Sbjct: 450 LCKNGKLRDAQEVYQVLLNNTY--HLDARIYTVMINGLCKEGFFDEALSLLSKMEDNGCT 507
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P TY++++ L +NR DKA L E +RGL
Sbjct: 508 PDGVTYEIIIRALFENNRNDKAVKLIREMIARGL 541
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 123/264 (46%), Gaps = 10/264 (3%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEAR 65
++ D +L +++ C +YA ++ + ++ + P+ LIKG C++G++ +A
Sbjct: 86 IQPDIFTLSILINCFCHLNQLNYAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKAL 145
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
++ GF L V+Y +++ +C+ K L + E LV+ D V +
Sbjct: 146 YFHNDVIAKGFYLNEVSYGTLINGLCKSGETKAALSLLRKIEGSLVKPD-------VVMY 198
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N +I +LCK + D L+ M YP+ T+ LI +++E +++RM
Sbjct: 199 NTIIDSLCKDKLVSDGYDLYSEMIVKKIYPDAITYNTLIYGFSILGQMKEAVGLLNRMTL 258
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
++ + + +LC V+ A V A+M G EP I TY LM + V
Sbjct: 259 KNVNPNV--YTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEV 316
Query: 246 DKANALFHEAQSRGLAVTPKEYAV 269
+KA +F+ RG+A+ + Y+V
Sbjct: 317 NKATYVFNTIARRGVALDVQSYSV 340
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 122/279 (43%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL S G+ Y+E +VK I+PD + LI G+ + G+++EA L M
Sbjct: 208 DKLVSDGYDLYSEMIVKK----IYPDAITYNTLIYGFSILGQMKEAVGLLNRMTLKNVNP 263
Query: 79 GVVAYNAMLDCVC---ELCRQKDPFLLH-------------------------SEAEKVL 110
V ++ ++D +C E+ + ++ + ++A V
Sbjct: 264 NVYTFSILIDVLCKDGEVKKARNVLAVMIKQGVEPNIATYSSLMDGCFSVKEVNKATYVF 323
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ RGV +V++++V+I CK + ++A+ LF M PN T+ LI L +
Sbjct: 324 NTIARRGVALDVQSYSVMINGFCKNKMVDEAVNLFKEMHSKNMVPNTVTYNSLIDGLCKL 383
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ + + ID M G A++ Y L LC +V+ A+ + +K G + I
Sbjct: 384 GRMSDAWDFIDEMHDRGQPANI--ITYSSLLDGLCKNHQVDKAITLLTKIKNQGIQLDIY 441
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L + ++ A ++ + + + Y V
Sbjct: 442 TYTILVDGLCKNGKLRDAQEVYQVLLNNTYHLDARIYTV 480
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ + LI G+C G +++AR L G M + VV N ++D +C++ R
Sbjct: 313 PNTITYNCLIDGFCKAGNIDKARELFGLMNEEQIQPNVVTLNTLVDGMCKIGRV------ 366
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A + EM +G+ N T+ LI+ C + + A++ F M GC P+ +
Sbjct: 367 -FSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYC 425
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L A R+ + ++ ++K AGFG LD+ Y ++ C +++E ++ M+
Sbjct: 426 LISGLTIAGRMGDASVVVSQLKRAGFG--LDRHCYNVLISGFCKKKKLERVYEMLNEMEE 483
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+G +P I TY+ L+S LG A + + GL + Y
Sbjct: 484 NGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYG 529
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 17/237 (7%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG--------GFELGVVAYNAMLDCVCE 92
I P +LI +C +++EA + ++ RG G E VV YN +++ +C+
Sbjct: 233 IHPSVITFGILINQFCKSRRIDEALGVFDKL-RGKGREKKWIGVEPDVVLYNTLINGLCK 291
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
+ R++ ++ + + P N T+N LI CK + A +LF M E
Sbjct: 292 VGREE-----EGLNLLEEMKTEKKNKP-NTITYNCLIDGFCKAGNIDKARELFGLMNEEQ 345
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
PN T L+ + + R+ E + MK G + Y ++ CG+ ++
Sbjct: 346 IQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKG--NAVTYTALISAFCGVNNIDK 403
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
A++ F M + GC P Y L+S L R+ A+ + + + G + Y V
Sbjct: 404 AMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDASVVVSQLKRAGFGLDRHCYNV 460
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 125/276 (45%), Gaps = 26/276 (9%)
Query: 1 MERDYGLKRDRGSLKVVVEKLC-----SKGFASYAERMVKDLARV----IFPDEAMCDML 51
++ D G D + ++V +L KGFA E +V + ++ +FPD L
Sbjct: 116 LQPDTGFPPDDFTGQIVFGELVKRDRPGKGFAD--EEIVGLVTKLCEYGVFPDTFKLTQL 173
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
I C + K A L + + G + + NA+L L R++D +H E +L
Sbjct: 174 ISKLCGNRKNGVAWELLHAVIKLGGTVEAASCNALL---TGLGRERD---IHKMNE-LLA 226
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM------GEW-GCYPNETTFVVLI 164
EM+ + +V TF +LI CK R+ ++AL +F ++ +W G P+ + LI
Sbjct: 227 EMEEMKIHPSVITFGILINQFCKSRRIDEALGVFDKLRGKGREKKWIGVEPDVVLYNTLI 286
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
L + R EEG +++ MK+ + Y + C ++ A ++F +M +
Sbjct: 287 NGLCKVGREEEGLNLLEEMKTEKKNKP-NTITYNCLIDGFCKAGNIDKARELFGLMNEEQ 345
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+P + T + L+ + RV A F+E + +GL
Sbjct: 346 IQPNVVTLNTLVDGMCKIGRVFSAVEFFNEMKGKGL 381
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 107/257 (41%), Gaps = 11/257 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+L +V+ +C G A ++ + + + LI +C +++A + EM
Sbjct: 352 TLNTLVDGMCKIGRVFSAVEFFNEMKGKGLKGNAVTYTALISAFCGVNNIDKAMQYFDEM 411
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + Y ++ + R D A V+ ++ G + +NVLI+
Sbjct: 412 LSSGCSPDAIVYYCLISGLTIAGRMGD-------ASVVVSQLKRAGFGLDRHCYNVLISG 464
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
CK +K E ++ + M E G P+ T+ L+ L +A +++ +M G S
Sbjct: 465 FCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPS 524
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFA-MMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
+ Y + C + ++ A+K+F M P Y++L+ L +N V++A +
Sbjct: 525 V--VTYGAVIHAYCLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVS 582
Query: 251 LFHEAQSRGLAVTPKEY 267
L + + +G+ Y
Sbjct: 583 LMDDMKVKGVQPNTTTY 599
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + + ++ C A + + L+ PD + LI G + G++ +A
Sbjct: 380 GLKGNAVTYTALISAFCGVNNIDKAMQYFDEMLSSGCSPDAIVYYCLISGLTIAGRMGDA 439
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ ++ R GF L YN ++ C+ + + + ++L EM+ GV ++ T
Sbjct: 440 SVVVSQLKRAGFGLDRHCYNVLISGFCKKKKLERVY-------EMLNEMEENGVKPDIVT 492
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L++ L K A K+ +M + G P+ T+ +I + ++E ++ M
Sbjct: 493 YNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEAMKIFGEMC 552
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
S + Y + LC VE A+ + MK G +P TY+ +
Sbjct: 553 STSM-VPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAI 602
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 9/180 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G DR V++ C K M+ ++ + PD + L+ G A
Sbjct: 450 GFGLDRHCYNVLISGFCKKKKLERVYEMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATA 509
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEM-DYRGVPRNVE 123
++ +M + G + VV Y A++ C L + D EA K+ EM VP N
Sbjct: 510 TKVMKKMIKEGLKPSVVTYGAVIHAYC-LKKNID------EAMKIFGEMCSTSMVPPNTV 562
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+N+LI LCK E A+ L M G PN TT+ + + + L + E++DRM
Sbjct: 563 IYNILIDALCKNNDVERAVSLMDDMKVKGVQPNTTTYNAIFKGVQDKRMLHKAFELMDRM 622
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 9/172 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +V L G FA+ + M K + + P +I +C+ ++EA
Sbjct: 485 GVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAYCLKKNIDEA 544
Query: 65 RRLAGEMYRGGF-ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
++ GEM V YN ++D LC+ D A ++ +M +GV N
Sbjct: 545 MKIFGEMCSTSMVPPNTVIYNILIDA---LCKNNDV----ERAVSLMDDMKVKGVQPNTT 597
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
T+N + + R A +L RM E C P+ T +L L +E+
Sbjct: 598 TYNAIFKGVQDKRMLHKAFELMDRMVEDACNPDYVTMEILTEWLSAIGEIEK 649
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 15/232 (6%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + E ++ + I P+ ++L+ C +G +++A+ + M + G VV Y
Sbjct: 192 QAFGLFHEMVLTN----ILPNVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTY 247
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
+++D C L Q + +A+ V + R + +V ++ ++I LCKI+ ++AL
Sbjct: 248 TSLMDGYC-LVNQVN------KAKHVFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALN 300
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
LF M C PN T+ LI L ++ R+ E++D+M G ++ Y L
Sbjct: 301 LFKEMH---CEPNMVTYSSLIDGLCKSGRVSHAWELLDKMHDDR-GQPVNIITYNSLLHA 356
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
LC V+ A+ + +K G EP + TY++L+ L R+ A LF EA
Sbjct: 357 LCKNHHVDKAIALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEA 408
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 100/223 (44%), Gaps = 41/223 (18%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I PD ++I G C ++EA L EM+ E +V Y++++D +C+ R
Sbjct: 273 RKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMH---CEPNMVTYSSLIDGLCKSGRV-- 327
Query: 99 PFLLHSEAEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
S A ++L +M D RG P N+ T+N L+ LCK + A+ L ++ + G PN
Sbjct: 328 -----SHAWELLDKMHDDRGQPVNIITYNSLLHALCKNHHVDKAIALVKKIKDQGIEPNM 382
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
TT+ +LI L + RL + D A+ +
Sbjct: 383 TTYNILIDGLCKEGRLRNAQGLFDE------------------------------AVTLL 412
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M+ +GC P TY+ ++ L ++ DKA L E +RGL
Sbjct: 413 SKMEDNGCIPDAVTYETIIRALFKNDENDKAEKLLREMIARGL 455
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 16/261 (6%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLA 68
D + +V+ C G ++A ++ + + F P+ LIKG L+ R++
Sbjct: 103 DIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGE-TRAALQMLRKIE 161
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-EAEKVLVEMDYRGVPRNVETFNV 127
G++ VV Y A++D L +L++S +A + EM + NV T N+
Sbjct: 162 GKLVNTD----VVMYTAIIDM---LSFMAFAWLVNSKQAFGLFHEMVLTNILPNVYTSNI 214
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
L+ LCK + A + M + G P+ T+ L+ ++ + + + +
Sbjct: 215 LVDALCKEGNVKQAKNMIAMMMKQGVVPDVVTYTSLMDGYCLVNQVNKAKHVFNILGKRK 274
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D +Y + LC I+ V+ AL +F M CEP + TY L+ L RV
Sbjct: 275 IKP--DVHSYTIIINGLCKIKMVDEALNLFKEMH---CEPNMVTYSSLIDGLCKSGRVSH 329
Query: 248 ANALFHEAQ-SRGLAVTPKEY 267
A L + RG V Y
Sbjct: 330 AWELLDKMHDDRGQPVNIITY 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 94/228 (41%), Gaps = 10/228 (4%)
Query: 36 DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR 95
+L RV PD +++I +C G++ A L G++ + GF+ +V ++
Sbjct: 96 ELNRVT-PDIVTFNIVINCYCHLGEINFAFSLLGKILKFGFQPNIVTLTTLIKGETRAAL 154
Query: 96 QKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
Q + + E LV D ++ + + + ++ A LFH M P
Sbjct: 155 Q-----MLRKIEGKLVNTDVVMYTAIIDMLSFMA--FAWLVNSKQAFGLFHEMVLTNILP 207
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N T +L+ +L + +++ MI M G D Y + C + +V A
Sbjct: 208 NVYTSNILVDALCKEGNVKQAKNMIAMMMKQGVVP--DVVTYTSLMDGYCLVNQVNKAKH 265
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
VF ++ +P + +Y ++++ L VD+A LF E VT
Sbjct: 266 VFNILGKRKIKPDVHSYTIIINGLCKIKMVDEALNLFKEMHCEPNMVT 313
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + Y+E +VK I+P+ + LI G+C+ G+ EEA L EM
Sbjct: 208 DKLVIDAYDLYSEMIVKK----IYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNP 263
Query: 79 GVVAYNAMLDCVC---ELCRQK----------------------DPFLLHSEAEKVLVEM 113
V +N ++D +C E+ R K D + L E K
Sbjct: 264 NVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEPDVVTYNSLMDGYFLVKEVNKATYVF 323
Query: 114 DY---RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
D RGV NV +++V+I LCK++ ++A+ LF M PN T+ LI L ++
Sbjct: 324 DTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKS 383
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ + +ID M+ G D Y + LC R+ A + M G +
Sbjct: 384 GRISDVWYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYLIDEMHDRGQPANVV 443
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
TY L+ L ++ +DKA ALF + + L V P Y +
Sbjct: 444 TYTSLIDGLCKNHNLDKAIALF--TKMKDLGVEPNVYTYN 481
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D +L +++ C G ++A ++ + ++ + P+ LIKG C++G++ +A
Sbjct: 84 GIQPDIFTLSILINCFCQLGQINFAFSILGKILKLGYEPNTVTLTTLIKGLCLNGEVRKA 143
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLHS----------- 104
++ GF L V+Y +++ +C +L R+ + LL
Sbjct: 144 LYFHNDVIAKGFYLNEVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIID 203
Query: 105 ---------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+A + EM + + NV TFN LI C + + E+A+ LF+ M P
Sbjct: 204 SFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQFEEAVGLFNEMILKNTNP 263
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N TF +L+ L + ++ ++ M D Y + ++ V A
Sbjct: 264 NVYTFNILVDGLCKEGEVKRAKSVLTVMIKQHVEP--DVVTYNSLMDGYFLVKEVNKATY 321
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
VF + G P +++Y ++++ L VD+A LF E S+ L Y
Sbjct: 322 VFDTLARRGVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITY 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 10/174 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S V++ LC A + K++ ++ + P+ + LI G C G++ +
Sbjct: 330 GVTPNVRSYSVMINGLCKVKMVDEAVILFKEMHSKSLTPNTITYNSLIDGLCKSGRISDV 389
Query: 65 RRLAGEMYRG--GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
L EM G + V Y+ ++D +C+ R D + L + EM RG P NV
Sbjct: 390 WYLIDEMQIKDLGVKPDVYTYSILIDRLCKSGRIADAWYL-------IDEMHDRGQPANV 442
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
T+ LI LCK + A+ LF +M + G PN T+ +LI L ++ R+ +
Sbjct: 443 VTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILIDRLCKSGRIADA 496
>Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0429:4891-7845 | 20130731
Length = 530
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 119/267 (44%), Gaps = 34/267 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
EKL ++ + Y++ +VK ++ PD + LI G+C+ G+L EA L EM
Sbjct: 224 EKLVTEAYELYSQMIVKKIS----PDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINP 279
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N ++D +C+ K D + L +E K VL
Sbjct: 280 NVYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNVVTYSSIMDGYCLVNEVNKAKHVL 339
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ GVP + +++N++I CKI+ +A LF+ M G PN T+ LI L +
Sbjct: 340 STITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKL 399
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ E +D M+ G D Y + LC V+ A+ + +K G + +
Sbjct: 400 GRISYAWEFVDEMRDN--GQPPDICTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQLNMY 457
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQS 257
TY++L+ L R+ A L +EA++
Sbjct: 458 TYNILIDGLCKQGRLKDAQGLLNEAET 484
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 31/292 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C G ++A + + ++ P + LI G C++GK++EA
Sbjct: 101 GITADTVTFNILINCYCHLGEMTFAFSIFAKILKLGHHPTTITFNTLINGMCLNGKIKEA 160
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
M F L V Y +++ +C +L R+ D L++
Sbjct: 161 LHFHDHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKIDGKLVNNNVIMHNTIIDS 220
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+EA ++ +M + + +V TFN LI C + + +A LFH M PN
Sbjct: 221 LCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVGQLIEAFGLFHEMVLKNINPN 280
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ +L + L+ ++ M G ++ Y + C + V A V
Sbjct: 281 VYTFNILVDALCKEGNLKGAKNLLAVMMKEGVIPNV--VTYSSIMDGYCLVNEVNKAKHV 338
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ + G P ++Y+++++ +++A +LF+E + RG++ Y+
Sbjct: 339 LSTITRMGVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYS 390
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 17/192 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C + A + ++ R I P+ LI G C G++ A
Sbjct: 346 GVPPDAQSYNIMINGFCKIKMINEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYA 405
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
EM G + YN+++D LC+ H + VLV+ + +G+ N+
Sbjct: 406 WEFVDEMRDNGQPPDICTYNSLIDA---LCKNH-----HVDKAIVLVKKIKDQGIQLNMY 457
Query: 124 TFNVLITNLCKIRKTEDALKLFH-------RMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
T+N+LI LCK + +DA L + +M + GC P+ T +IR+L++ + E
Sbjct: 458 TYNILIDGLCKQGRLKDAQGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERA 517
Query: 177 DEMIDRMKSAGF 188
++++ M + G
Sbjct: 518 EKLLREMIARGL 529
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 11/207 (5%)
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L+ ++ G V +N +++C C L F + ++ K+ G
Sbjct: 90 AISLSHQLELNGITADTVTFNILINCYCHLGEMTFAFSIFAKILKL-------GHHPTTI 142
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN LI +C K ++AL M + N+ T+ LI L + + E +++ ++
Sbjct: 143 TFNTLINGMCLNGKIKEALHFHDHMLAHEFHLNQVTYAKLINGLCKMGKTTEALQLLRKI 202
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
G + + + + LC + V A ++++ M P + T++ L+
Sbjct: 203 D--GKLVNNNVIMHNTIIDSLCKEKLVTEAYELYSQMIVKKISPDVVTFNSLIYGFCIVG 260
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAVD 270
++ +A LFHE + + P Y +
Sbjct: 261 QLIEAFGLFHEMVLKN--INPNVYTFN 285
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 115/246 (46%), Gaps = 13/246 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + E ++K+ I PD +L+ C DG + A+ + M + G VV Y
Sbjct: 252 EAFGLFHEMVLKN----INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTY 307
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
++++D C + ++A+ V M GV + ++N++I L KI+ ++AL
Sbjct: 308 SSLMDGYCLVNEV-------NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 360
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
LF M G P+ T+ LI L + R+ +++D M + G A D Y + +
Sbjct: 361 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPA--DILTYNSLIDV 418
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
LC ++ A+ + +K G +P + TY++L+ L R+ A +F + +G +V
Sbjct: 419 LCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVN 478
Query: 264 PKEYAV 269
Y +
Sbjct: 479 AWTYNI 484
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + ++V C G ++A + + ++ + P + LI G C++GKL+EA
Sbjct: 89 GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEA 148
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE-------------------------------- 92
+ GF L V+Y +++ +C+
Sbjct: 149 LHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINS 208
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
LC+ K S+A ++ EM + + +V TFN LI C + + ++A LFH M
Sbjct: 209 LCKDKAV----SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
P+ TF +L+ +L + + M+ M G D Y + C + V
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIP--DVVTYSSLMDGYCLVNEVNK 322
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
A VF+ M G P +Y+++++ LG VD+A +LF E +G+A
Sbjct: 323 AKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIA 371
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
+ D + ++V+ LC G + A+ M+ + + + PD L+ G+C+ ++ +A
Sbjct: 264 NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKA 323
Query: 65 RRLAGEMYRGGFE------------LG-----------------------VVAYNAMLDC 89
+ + M R G LG V YN+++D
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383
Query: 90 VCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMG 149
+C+L R S A +++ EM G+P ++ T+N LI LCK + A+ L ++
Sbjct: 384 LCKLGRI-------SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIK 436
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
+ G P+ T+ +LI L + RL+ ++ + G+ S++ Y + LC
Sbjct: 437 DQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGY--SVNAWTYNIMINGLCKEGL 494
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
A + + M+ +G P TY+ ++ L + +KA L E RGL
Sbjct: 495 FNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+++ +G+ + TFN+L+ C + + A +F ++ + G +P TF LI +
Sbjct: 84 QLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNG 143
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
+L+E D + + GF LD+ +Y + LC I AL++ ++ +
Sbjct: 144 KLKEALHFHDHVIALGF--HLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVM 201
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y+++++ L V A L+ E ++ ++
Sbjct: 202 YNIIINSLCKDKAVSDAYQLYSEMITKRIS 231
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 87/211 (41%), Gaps = 11/211 (5%)
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
+ A L+ ++ G +V +N +++C C L F + ++ K+ G
Sbjct: 72 NNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKL-------G 124
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
TFN LI +C K ++AL + G + ++ ++ LI L +
Sbjct: 125 YHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAAL 184
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+M+ +++ G + D Y + LC + V A ++++ M P + T++ L+
Sbjct: 185 QMLKKIE--GKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLIL 242
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
++ +A LFHE + + P Y
Sbjct: 243 GFCVVGQLKEAFGLFHEMVLKN--INPDVYT 271
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + + ++K+ I P++ ++L+ C +G ++ A+ M +G + VV Y
Sbjct: 251 EAFGLFHQMVLKN----INPNDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTY 306
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
N+++D C + ++A+ VL + GV + +++N++I CKI+ +AL
Sbjct: 307 NSLMDGYCLVNEV-------NKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEALS 359
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
LF+ M PN T+ LI L ++ R+ +++D M G D Y +
Sbjct: 360 LFNEMRCQRISPNTVTYNSLIDGLCKSGRISHAWKLVDEMHVN--GQPPDIFTYSSLIDA 417
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
LC ++ A+ + +K G +P + TY++L+ L R+ A +F + ++G ++
Sbjct: 418 LCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLN 477
Query: 264 PKEYAV 269
+ Y +
Sbjct: 478 IRTYNI 483
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
+K D + +++ C + A+ ++ +AR+ + PD +++I G+C + EA
Sbjct: 298 SIKPDVVTYNSLMDGYCLVNEVNKAKHVLSTIARMGVAPDAQSYNIMINGFCKIKMVNEA 357
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM V YN+++D +C+ R S A K++ EM G P ++ T
Sbjct: 358 LSLFNEMRCQRISPNTVTYNSLIDGLCKSGRI-------SHAWKLVDEMHVNGQPPDIFT 410
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI LCK + A+ L ++ + G PN T+ +LI L + RL+ ++ +
Sbjct: 411 YSSLIDALCKNNHLDKAIALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLL 470
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ G+ SL+ + Y + LC + A + + M+ + P + TY+ ++ L +
Sbjct: 471 TKGY--SLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFYKDY 528
Query: 245 VDKANALFHEAQSRGL 260
+KA L E +RGL
Sbjct: 529 NEKAEKLLREMVARGL 544
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 10/258 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+L +V+ C ++A + + ++ + PD + L+KG+C++GK++EA +
Sbjct: 95 TLGIVINCYCHLREINFAFSLFGKILKMGYQPDTITLNTLVKGFCLNGKVKEALHFHDRV 154
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
GF+L V Y +++ +C++ + A +VL ++D + V +V ++++I +
Sbjct: 155 LALGFQLNQVTYATLINGLCKMGETR-------AALQVLRKIDGKLVNTDVVMYSIIIDS 207
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK + DA +L+ M P+ TF LI RL+E + +M
Sbjct: 208 LCKDKLVIDAYELYSEMIAKTISPDVVTFNSLIYGFCIVGRLKEAFGLFHQMVLKNINP- 266
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ + + LC V+ A AMM +P + TY+ LM N V+KA +
Sbjct: 267 -NDYTFNILVDALCKEGNVKGAKNALAMMIKGSIKPDVVTYNSLMDGYCLVNEVNKAKHV 325
Query: 252 FHEAQSRGLAVTPKEYAV 269
G+A + Y +
Sbjct: 326 LSTIARMGVAPDAQSYNI 343
>Medtr1g056160.1 | PPR containing plant protein | HC |
chr1:24577487-24578941 | 20130731
Length = 484
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 167 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 226
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 227 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 279
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 280 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 336
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 337 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 390
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 152 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 204
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 205 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 263
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 264 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 318
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 319 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 346
>Medtr1g056160.3 | PPR containing plant protein | HC |
chr1:24576326-24582031 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.8 | PPR containing plant protein | HC |
chr1:24576341-24582031 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.5 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.4 | PPR containing plant protein | HC |
chr1:24576341-24581268 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.6 | PPR containing plant protein | HC |
chr1:24576326-24581268 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.7 | PPR containing plant protein | HC |
chr1:24576340-24582031 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr1g056160.2 | PPR containing plant protein | HC |
chr1:24576341-24582024 | 20130731
Length = 501
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 184 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 243
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 244 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 296
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K E+AL++ RM GC P+ F LI +L +A R+++ + K
Sbjct: 297 TTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVF---KV 353
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
A AS+ + Y +++ C + E A + M+ G C+P I+TY L+
Sbjct: 354 AMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI 407
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 169 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 221
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 222 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 280
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ E AL+V M A GC P ++ L+
Sbjct: 281 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLI 335
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPK 265
LG R+D A +F A + +V P
Sbjct: 336 YTLGRAGRIDDATHVFKVAMPKA-SVAPN 363
>Medtr3g008430.2 | PPR containing plant-like protein | HC |
chr3:1537892-1535131 | 20130731
Length = 503
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
+++ LC G+ +A + + D M +LI GWC G+ + A EM G
Sbjct: 172 LLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGV 231
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSE---------AEKVLVEMDYRGVPRNVETFNV 127
E VV YN +L+ +C LH E AEKV EM G+ +V +F++
Sbjct: 232 EPNVVTYNVILNGICRKAS------LHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSI 285
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
++ + K + L M E G PN T+ +I+ L R+EE +++ID M G
Sbjct: 286 VLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNG 345
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLMSKLGAHNRVD 246
Y F G + + ALK F MK DG CEP TY +L++ + +
Sbjct: 346 VSPC--AATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIG 403
Query: 247 KANALFHEAQSRGLAVTPKEYAV 269
++++ G+ Y V
Sbjct: 404 VVKEIWNDMMESGVGPDLDSYTV 426
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
L + +YN ++D V ++ Q D A +++VEMD +P TF +LI L
Sbjct: 93 LSLQSYNLLIDIVSKV-HQFD------LASQLIVEMDQINLPPTPTTFFILIKRLISANL 145
Query: 138 TEDALKLFHRMGEWG-CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
T A++ F+ + + F L+ +L + ++ E+ +R S F A D K
Sbjct: 146 TRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNR-NSNRFVA--DVKM 202
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
Y + C I R + AL MK G EP + TY+++++
Sbjct: 203 YTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILN 243
>Medtr3g008430.1 | PPR containing plant-like protein | HC |
chr3:1537892-1533804 | 20130731
Length = 503
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
+++ LC G+ +A + + D M +LI GWC G+ + A EM G
Sbjct: 172 LLDTLCKYGYVKHACELFNRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGV 231
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSE---------AEKVLVEMDYRGVPRNVETFNV 127
E VV YN +L+ +C LH E AEKV EM G+ +V +F++
Sbjct: 232 EPNVVTYNVILNGICRKAS------LHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSI 285
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
++ + K + L M E G PN T+ +I+ L R+EE +++ID M G
Sbjct: 286 VLHVYSRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNG 345
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLMSKLGAHNRVD 246
Y F G + + ALK F MK DG CEP TY +L++ + +
Sbjct: 346 VSPC--AATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIG 403
Query: 247 KANALFHEAQSRGLAVTPKEYAV 269
++++ G+ Y V
Sbjct: 404 VVKEIWNDMMESGVGPDLDSYTV 426
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
L + +YN ++D V ++ Q D A +++VEMD +P TF +LI L
Sbjct: 93 LSLQSYNLLIDIVSKV-HQFD------LASQLIVEMDQINLPPTPTTFFILIKRLISANL 145
Query: 138 TEDALKLFHRMGEWG-CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
T A++ F+ + + F L+ +L + ++ E+ +R S F A D K
Sbjct: 146 TRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNR-NSNRFVA--DVKM 202
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
Y + C I R + AL MK G EP + TY+++++
Sbjct: 203 YTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILN 243
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ I+ Y LM L +VD+A A+
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAML 328
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ I+ Y LM L +VD+A A+
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAML 328
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ I+ Y LM L +VD+A A+
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAML 328
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ I+ Y LM L +VD+A A+
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAML 328
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
+ I+ Y LM L +VD+A A+
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAML 328
>Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891540-24889511 | 20130731
Length = 548
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 31/277 (11%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G + A+ ++ + + I PD + L+ G+C K+ +A+ + M
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Query: 72 YRGGFELGVVAYNAMLDCVCEL--------------CRQKDPFLLHSE------------ 105
GG V Y M++ C++ CR+ P ++
Sbjct: 333 ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI 392
Query: 106 --AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A K++ EM RG P N+ T++ ++ LCK + A+ L + + G P+ T+ +L
Sbjct: 393 FYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTIL 452
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I+ L Q+ RLE+ + + + G+ +LD AY + C + AL + + M+ +
Sbjct: 453 IKGLCQSGRLEDAQNVFEDLLVKGY--NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GC P KTY+L++ L + D A L E RGL
Sbjct: 511 GCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ ++L+ G+C +GK+ +A+ + M + + VV YN+++D C + +
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV---- 322
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++A+ + M GV NV+ + ++ CKI+ ++A+ LF M PN T+
Sbjct: 323 ---NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L + R+ +++D M G ++ Y L LC V+ A+ + +
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI--VTYSSILDALCKNHHVDKAIALLTNL 437
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L R++ A +F + +G + Y V
Sbjct: 438 KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D + +++ G S + + K L + P + LIKG C+ G + +A
Sbjct: 91 GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA 150
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V+Y +++ +C++ R + A ++L +D + V N
Sbjct: 151 LHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI-------TAALQLLKRVDGKLVQPNAVM 203
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I N+CK + DA L+ +M P+ T+ LI ++L ++ ++MK
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263
Query: 185 SAGFGASLDKKAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
++ Y F ++ C +V A V A+M D +P + TY+ LM +
Sbjct: 264 KENINPNV-----YTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
N+V+KA +F S G+ + Y
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYT 345
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ LC G + A +++K + +++ P+ M +M+I C + +A
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M V YNA++ + + + A + +M + NV T
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKL-------NYAIDLFNKMKKENINPNVYT 273
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+L+ CK K DA + M + P+ T+ L+ ++ + ++ D M
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G A++ + Y + C I+ V+ A+ +F M+ P + TY L+ L R
Sbjct: 334 SGGVIANV--QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391
Query: 245 VDKANALFHEAQSRG 259
+ A L E RG
Sbjct: 392 IFYALKLVDEMHDRG 406
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
HS A + +M+ G+ + TFN+LI ++ + +F ++ + G +P TF
Sbjct: 77 HSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNT 136
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L + + D++ + GF LD+ +Y + LC + R+ AL++ +
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGF--HLDQVSYGTLINGLCKVGRITAALQLLKRVDG 194
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL---------------AVTPKEY 267
+P Y++++ + V+ A L+ + ++ + AV+ Y
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254
Query: 268 AVD 270
A+D
Sbjct: 255 AID 257
>Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24891533-24888467 | 20130731
Length = 548
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 127/277 (45%), Gaps = 31/277 (11%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G + A+ ++ + + I PD + L+ G+C K+ +A+ + M
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSM 332
Query: 72 YRGGFELGVVAYNAMLDCVCEL--------------CRQKDPFLLHSE------------ 105
GG V Y M++ C++ CR+ P ++
Sbjct: 333 ASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRI 392
Query: 106 --AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A K++ EM RG P N+ T++ ++ LCK + A+ L + + G P+ T+ +L
Sbjct: 393 FYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTIL 452
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I+ L Q+ RLE+ + + + G+ +LD AY + C + AL + + M+ +
Sbjct: 453 IKGLCQSGRLEDAQNVFEDLLVKGY--NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GC P KTY+L++ L + D A L E RGL
Sbjct: 511 GCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ ++L+ G+C +GK+ +A+ + M + + VV YN+++D C + +
Sbjct: 267 INPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV---- 322
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++A+ + M GV NV+ + ++ CKI+ ++A+ LF M PN T+
Sbjct: 323 ---NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTY 379
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L + R+ +++D M G ++ Y L LC V+ A+ + +
Sbjct: 380 SSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI--VTYSSILDALCKNHHVDKAIALLTNL 437
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
K G P + TY +L+ L R++ A +F + +G + Y V
Sbjct: 438 KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTV 486
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 16/267 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D + +++ G S + + K L + P + LIKG C+ G + +A
Sbjct: 91 GIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQA 150
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V+Y +++ +C++ R + A ++L +D + V N
Sbjct: 151 LHFHDKVVAQGFHLDQVSYGTLINGLCKVGRI-------TAALQLLKRVDGKLVQPNAVM 203
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I N+CK + DA L+ +M P+ T+ LI ++L ++ ++MK
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263
Query: 185 SAGFGASLDKKAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
++ Y F ++ C +V A V A+M D +P + TY+ LM +
Sbjct: 264 KENINPNV-----YTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCS 318
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
N+V+KA +F S G+ + Y
Sbjct: 319 INKVNKAKDIFDSMASGGVIANVQIYT 345
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ LC G + A +++K + +++ P+ M +M+I C + +A
Sbjct: 161 GFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDA 220
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M V YNA++ + + + A + +M + NV T
Sbjct: 221 FDLYSQMVAKRICPDVFTYNALISGFSAVSKL-------NYAIDLFNKMKKENINPNVYT 273
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+L+ CK K DA + M + P+ T+ L+ ++ + ++ D M
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G A++ + Y + C I+ V+ A+ +F M+ P + TY L+ L R
Sbjct: 334 SGGVIANV--QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391
Query: 245 VDKANALFHEAQSRG 259
+ A L E RG
Sbjct: 392 IFYALKLVDEMHDRG 406
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 17/183 (9%)
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
HS A + +M+ G+ + TFN+LI ++ + +F ++ + G +P TF
Sbjct: 77 HSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNT 136
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L + + D++ + GF LD+ +Y + LC + R+ AL++ +
Sbjct: 137 LIKGLCLKGHIHQALHFHDKVVAQGF--HLDQVSYGTLINGLCKVGRITAALQLLKRVDG 194
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL---------------AVTPKEY 267
+P Y++++ + V+ A L+ + ++ + AV+ Y
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254
Query: 268 AVD 270
A+D
Sbjct: 255 AID 257
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 45/291 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++++ LC KG+ A + ++ + F P+ +LI G+C G EEA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M G L V YN ++ +C+ + +D ++ E M +G ++ T
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGE-------MSSKGCKPDIYT 479
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI LCK K E+AL L+ M G N T+ LI + + +++ D+++ M+
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539
Query: 185 SAGFGASLDKKAYYQFLTILCG----------IE-------------------------R 209
G LD Y + LC IE +
Sbjct: 540 FRG--CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
V AL+ M G P I TY+ L++ L R +A LF+ Q++G+
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGI 648
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + ++ LC G A +M +++ + PD + LI G C + K+EEA
Sbjct: 437 GLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M G V YN ++ L L +A+K++ EM +RG P + T
Sbjct: 497 LGLYRDMLLEGVIANTVTYNTLIHAFLRL-------ELIQQADKLVGEMRFRGCPLDNIT 549
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI LCK TE L L +M +P+ + +LI S + ++ + + + M
Sbjct: 550 YNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI 609
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G + D Y + LC + R + AL +F ++A G P TY+ L+S+
Sbjct: 610 QRGL--TPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGL 667
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A L + S G +++ Y
Sbjct: 668 FNDACQLLFKGVSNGFIPNEITWSILINY 696
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 120/264 (45%), Gaps = 15/264 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + V+ LC G A ++ + L R D + L+ G C GK++EA
Sbjct: 265 GCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA 324
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVE-MDYRGVPRNVE 123
R + ++ V YN +++ R EA+ +L + M G +
Sbjct: 325 RAMLSKIPNPN----TVLYNTLINGYVVSGR-------FEEAKDLLYKNMVIAGFEPDAF 373
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TFN++I LCK AL+ M + G PN T+ +LI + EE ++++ M
Sbjct: 374 TFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSM 433
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G SL+ Y + LC +++ AL+++ M + GC+P I T++ L+ L ++
Sbjct: 434 SAKGL--SLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKND 491
Query: 244 RVDKANALFHEAQSRGLAVTPKEY 267
++++A L+ + G+ Y
Sbjct: 492 KMEEALGLYRDMLLEGVIANTVTY 515
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 8/174 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + +++ LC G +++ + IFP C++LI +C GK+ +A
Sbjct: 542 GCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDA 601
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M + G +V YN++++ +C++ R EA + + +G+ + T
Sbjct: 602 LQFLRDMIQRGLTPDIVTYNSLINGLCKMGR-------FQEALNLFNGLQAKGIHPDAVT 654
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+N LI+ C DA +L + G PNE T+ +LI + + + D
Sbjct: 655 YNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKKHQRDNSDS 708
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A V +M RG+ V TF V++ C + + + A L M + GC PN + +LI
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKAD 223
+L + R+ E ++++ M G D + + + LC R+ A K+ +++
Sbjct: 244 ALSENNRVNEAMKLLEEMFL--MGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ I+ Y LM L +VD+A A+ +
Sbjct: 302 TADALIQGY--LMHGLCRMGKVDEARAMLSK 330
>Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr6:29083748-29087017 | 20130731
Length = 593
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 13/224 (5%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD ++L+ G+C D K++E + + M + G VV YN+++D C L ++ +
Sbjct: 269 IKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC-LVKEVN-- 325
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A+ + M GV ++ ++N+LI CKI+K + A+ LF+ M PN T+
Sbjct: 326 ----TAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTY 381
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ +++D+M G ++ Y + L +V+ A+ +
Sbjct: 382 NSLIDGLSKSGRISYALQLVDQMHDRGVPPNI--LTYNSIIDALFKTHQVDKAIALITKF 439
Query: 221 KADGCEPGIKTYDLLMSKL----GAHNRVDKANALFHEAQSRGL 260
K G +P + TY +L+ L G V+ N + H +GL
Sbjct: 440 KDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGL 483
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 114/278 (41%), Gaps = 44/278 (15%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
V V + S F+ +A K L P+ + LIKG C+ G++ +A ++ G
Sbjct: 108 VSVNWVLSLAFSVFA----KILKMGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALG 163
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
F L V+Y ++ +C++ + A +L +D + V N +N +I +CK
Sbjct: 164 FHLDQVSYGTLIHGLCKVGETR-------AALDLLQRVDGKLVQLNAVMYNTVIYGMCKD 216
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR-----MKSAGF-- 188
+ DA L+ M G PN T+ LI + +L++ ++ ++ +K G+
Sbjct: 217 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTF 276
Query: 189 --------------------------GASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
G D Y + C ++ V A +F M
Sbjct: 277 NILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 336
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P I++Y++L++ +VDKA LF+E + +
Sbjct: 337 GGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNI 374
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 25/258 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C A + ++ + I P+ + LI G G++ A
Sbjct: 338 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 397
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDC----------VCELCRQKDPFLLHS-EAEKVLVE- 112
+L +M+ G ++ YN+++D + + + KD + S +L++
Sbjct: 398 LQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDG 457
Query: 113 -MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
G V T+NV+I CK ++AL L +M + C PN T+ + IRSL
Sbjct: 458 LCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNN 517
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC--EPGI 229
++ +++ M + G L++ A Y C ++ +L + D C +P
Sbjct: 518 ENDKAEKLFREMITRGL---LNRSASYP-----CSSMKIHQSLTMVQHTWCDSCSHQPK- 568
Query: 230 KTYDLLMSKLGAHNRVDK 247
K LL+S N +K
Sbjct: 569 KDVRLLLSTDNKSNTTEK 586
>Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24740195-24738748 | 20130731
Length = 452
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 9/223 (4%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
L + I PD ++L+ G C +G++++AR + M + + V+ YN+++D L +Q
Sbjct: 181 LLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYF-LVKQ 239
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++ +A V M RGV +V +++V+I LCK + ++A+ L M PN
Sbjct: 240 EN------KATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPN 293
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ LI L+++ R+ + ++++ M + G A D Y L LC +V+ A+ +
Sbjct: 294 TVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPA--DVITYNSLLDALCKNHQVDKAITL 351
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+K G +P I TY +L+ L + R+ A ++ +G
Sbjct: 352 LTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKG 394
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + PD ++I G C ++EA L EM+ V Y++++D + + R D
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
A ++ EM RG P +V T+N L+ LCK + + A+ L ++ + G P+
Sbjct: 313 -------AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 365
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ +L+ L + RL++ E+ + G+ LD + AL + +
Sbjct: 366 TYTILVDGLCKNGRLKDAQEVYQILLIKGY--HLD--------------SLFDKALSLLS 409
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M+ +GC P T+++L+ L ++ DKA L E +RGL
Sbjct: 410 KMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARGL 451
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 15/217 (6%)
Query: 56 CVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY 115
C++ K++E ++ GF+L V+Y ++D +C+ + A +VL +D
Sbjct: 60 CLNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETR-------AAMQVLRNIDG 112
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
V NV ++ +I +LCK + DA L+ +M P+ T+ L+ RL+E
Sbjct: 113 LLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKE 172
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTI---LCGIERVEHALKVFAMMKADGCEPGIKTY 232
+ ++M K Y F + LC ++ A V A+M +P + TY
Sbjct: 173 AVGLFNQMLLKNI-----KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITY 227
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ LM + +KA +F+ RG+ Y+V
Sbjct: 228 NSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSV 264
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + ++ S +++ LC G A ++++++ ++ P+ M +I C D + +A
Sbjct: 79 GFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDA 138
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M V+ YN ++ + R K EA + +M + + ++ T
Sbjct: 139 FDLYSQMLLKRISPDVITYNTLMYGCLIVGRLK-------EAVGLFNQMLLKNIKPDIYT 191
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN+L+ LCK + + A + M + P+ T+ L+ + + + + + M
Sbjct: 192 FNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM- 250
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
A G + D +Y + LC + V+ A+ + M + P TY L+ L R
Sbjct: 251 -ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309
Query: 245 VDKANALFHEAQSRG 259
+ A L +E +RG
Sbjct: 310 IFDAWDLVNEMHNRG 324
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
GLK +L +V LC +G + A + +++ + P+ L+ G C G + A
Sbjct: 137 GLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVNGLCKIGDMVSA 196
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+M +E VV YNA++D C K F+ SEA + EM+ +GV ++ T
Sbjct: 197 VGCIRDMVERNYEPNVVVYNAIMDGFC-----KGGFV--SEALSLFAEMNEKGVKGSLVT 249
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI +C I + + A L + M E G P+ TF +L+ + + E +I M
Sbjct: 250 YNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEAKSVISFMV 309
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G ++ Y + C + ++ A+KVF +M C P + TY+ L+
Sbjct: 310 QMGVEPNV--VTYNSLIGGYCLMNEIDEAIKVFRLMVLKKCLPSVVTYNSLIHGWCKVKD 367
Query: 245 VDKANALFHEAQSRGL 260
VDKA L +E + GL
Sbjct: 368 VDKAMCLLNEMVNEGL 383
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + +++ +CS G A ++ ++ + + PD +L+ G+C +G + EA
Sbjct: 242 GVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTILVDGFCKEGLILEA 301
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G E VV YN+++ C L + D EA KV M + +V T
Sbjct: 302 KSVISFMVQMGVEPNVVTYNSLIGGYC-LMNEID------EAIKVFRLMVLKKCLPSVVT 354
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI CK++ + A+ L + M G YP+ T+ L+ + + E+ MK
Sbjct: 355 YNSLIHGWCKVKDVDKAMCLLNEMVNEGLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMK 414
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G +L A I C R E A+ +F ++ + I Y++++ L +
Sbjct: 415 QYGMVPTLLTCAVVLDGLIKCHF-RFE-AMLLFRALEESDLDLDIVIYNVMIDGLCKDGK 472
Query: 245 VDKANALFHEAQSRGL 260
++ A + +GL
Sbjct: 473 LNDARKVLARLLVKGL 488
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 8/186 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + +V C G A+ + + + + P C +++ G EA
Sbjct: 382 GLYPDVVTWTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEA 441
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L + +L +V YN M+D +C KD L ++A KVL + +G+ + T
Sbjct: 442 MLLFRALEESDLDLDIVIYNVMIDGLC-----KDGKL--NDARKVLARLLVKGLRFDSYT 494
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN++I LC+ +DA L +M E GC PN+ ++ + ++ L + + + + MK
Sbjct: 495 FNIMIGGLCRKGLLDDAEDLLMKMEENGCQPNKCSYNIFVQGLLRKRDVLRSKKYLQIMK 554
Query: 185 SAGFGA 190
+ GF
Sbjct: 555 NKGFAV 560
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 122/291 (41%), Gaps = 41/291 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++V+ C +G A+ ++ + ++ + P+ + LI G+C+ +++EA
Sbjct: 277 GVMPDVQTFTILVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEA 336
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M VV YN+++ C+ KD +A +L EM G+ +V T
Sbjct: 337 IKVFRLMVLKKCLPSVVTYNSLIH---GWCKVKDV----DKAMCLLNEMVNEGLYPDVVT 389
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA----------RLE 174
+ L++ C++ K A +LF M ++G P T V++ L + LE
Sbjct: 390 WTTLVSGFCEVGKPLAAKELFFTMKQYGMVPTLLTCAVVLDGLIKCHFRFEAMLLFRALE 449
Query: 175 EGD---------EMIDRMKSAGF--------------GASLDKKAYYQFLTILCGIERVE 211
E D MID + G G D + + LC ++
Sbjct: 450 ESDLDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLD 509
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
A + M+ +GC+P +Y++ + L V ++ +++G AV
Sbjct: 510 DAEDLLMKMEENGCQPNKCSYNIFVQGLLRKRDVLRSKKYLQIMKNKGFAV 560
>Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0573:3775-4583 | 20130731
Length = 268
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 55 WCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD 114
+C +GK++EA+ + M + GF+ VV Y++++D C L ++ + +A+ + M
Sbjct: 1 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYC-LVKEVN------KAKSIFNNMA 53
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
GV +++++N+LI CKI+ T+ A+ LF M PN T+ LI L ++ ++
Sbjct: 54 QGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKIS 113
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
+++D M G D Y L LC + A+ + +K G +P + TY +
Sbjct: 114 YALKLVDEMHDR--GQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 171
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L++ L R + A +F + +G + Y V
Sbjct: 172 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTV 206
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G K + + +++ C + A+ + ++A+ + PD ++LI G+C + A
Sbjct: 21 GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSYNILINGFCKIKMTDAA 80
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ VV YN+++D +C+ + S A K++ EM RG P ++ T
Sbjct: 81 MNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKI-------SYALKLVDEMHDRGQPPDIIT 133
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ L+ LCK + A+ L ++ + G PN T+ +LI L + R E+ + + +
Sbjct: 134 YSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPEDAQNIFEDLL 193
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +++ Y + + C AL + + M+ +GC P TY++++ L +
Sbjct: 194 VKGYNINVN--TYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYEIIIRSLFDKDE 251
Query: 245 VDKANALFHEAQSRGL 260
DKA L E +RGL
Sbjct: 252 NDKAEKLLLEMITRGL 267
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + E ++K+ I PD ++L+ C +G L+ A+ + M + G VV Y
Sbjct: 261 EAFGLFREMVLKN----INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTY 316
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
++++D C L Q + +A+ VL + G N ++ +I CKI+ ++AL
Sbjct: 317 SSLMDGYC-LVNQVN------KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
LF+ M G P++ T+ LI L ++ R+ E++D M G A++ Y +
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI--FTYNCLIDA 427
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
LC V+ A+ + +K G +P + T+++L+ L R+ A +F + S+G +V
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVN 487
Query: 264 PKEYAV 269
Y +
Sbjct: 488 AWTYNI 493
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G+ D + +++ C ++A M+ + ++ + PD + LIKG C++GK++E
Sbjct: 97 HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + GF L +Y +++ +C++ + A ++L ++D + V NV
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETR-------TALQMLRKIDGKLVKINVV 209
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+N +I +LCK + DA +L+ +M P+ TF LI +LEE + M
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269
Query: 184 KSAGFGASLDKKAYYQFLTI---LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
YY F + LC ++ A + +M +G P + TY LM
Sbjct: 270 VLKNINPD-----YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEY 267
N+V+KA + + G A Y
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSY 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
+ C M I G+C ++EA L +M G V YN+++D +C+ R S
Sbjct: 349 HSYCTM-INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRI-------S 400
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
A +++ EM G P N+ T+N LI LCK + A+ L ++ + G P+ TF +LI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
L + RL+ ++ + S G+ S++ Y + LC + A + + M +G
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGY--SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P TY+ L+ L + +KA L E +RGL
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIARGL 554
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D+ + +++ LC G SYA +V ++ P + LI C + +++A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + +N ++ +C++ R K+ A+ V ++ +G N T
Sbjct: 438 IALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKN-------AQDVFQDLLSKGYSVNAWT 490
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+++ LCK ++A L +M + G P+ T+ LI++L+ E+ ++++ M
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Query: 185 SAGF 188
+ G
Sbjct: 551 ARGL 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
+++ G+ ++ TFN+LI C + + A + ++ + G P+ TF LI+ L +
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
++E D + + GF LD+ +Y + LC I AL++ + + + Y
Sbjct: 154 VKEALHFHDHVLALGF--HLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ ++ L H V A L+ + ++ ++
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKIS 240
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%), Gaps = 13/246 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ F + E ++K+ I PD ++L+ C +G L+ A+ + M + G VV Y
Sbjct: 261 EAFGLFREMVLKN----INPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTY 316
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
++++D C L Q + +A+ VL + G N ++ +I CKI+ ++AL
Sbjct: 317 SSLMDGYC-LVNQVN------KAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
LF+ M G P++ T+ LI L ++ R+ E++D M G A++ Y +
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANI--FTYNCLIDA 427
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
LC V+ A+ + +K G +P + T+++L+ L R+ A +F + S+G +V
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVN 487
Query: 264 PKEYAV 269
Y +
Sbjct: 488 AWTYNI 493
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 118/267 (44%), Gaps = 16/267 (5%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G+ D + +++ C ++A M+ + ++ + PD + LIKG C++GK++E
Sbjct: 97 HGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKE 156
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + GF L +Y +++ +C++ + A ++L ++D + V NV
Sbjct: 157 ALHFHDHVLALGFHLDQFSYGTLINGLCKIGETR-------TALQMLRKIDGKLVKINVV 209
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+N +I +LCK + DA +L+ +M P+ TF LI +LEE + M
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269
Query: 184 KSAGFGASLDKKAYYQFLTI---LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
YY F + LC ++ A + +M +G P + TY LM
Sbjct: 270 VLKNINPD-----YYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEY 267
N+V+KA + + G A Y
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSY 351
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 10/216 (4%)
Query: 45 EAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS 104
+ C M I G+C ++EA L +M G V YN+++D +C+ R S
Sbjct: 349 HSYCTM-INGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRI-------S 400
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
A +++ EM G P N+ T+N LI LCK + A+ L ++ + G P+ TF +LI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
L + RL+ ++ + S G+ S++ Y + LC + A + + M +G
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGY--SVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P TY+ L+ L + +KA L E +RGL
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIARGL 554
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 89/184 (48%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ D+ + +++ LC G SYA +V ++ P + LI C + +++A
Sbjct: 378 GIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + +N ++ +C++ R K+ A+ V ++ +G N T
Sbjct: 438 IALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKN-------AQDVFQDLLSKGYSVNAWT 490
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+++ LCK ++A L +M + G P+ T+ LI++L+ E+ ++++ M
Sbjct: 491 YNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMI 550
Query: 185 SAGF 188
+ G
Sbjct: 551 ARGL 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
+++ G+ ++ TFN+LI C + + A + ++ + G P+ TF LI+ L +
Sbjct: 94 LEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGK 153
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
++E D + + GF LD+ +Y + LC I AL++ + + + Y
Sbjct: 154 VKEALHFHDHVLALGF--HLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMY 211
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ ++ L H V A L+ + ++ ++
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKIS 240
>Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0051:44584-42871 | 20130731
Length = 443
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 33/264 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
EKL ++ + Y++ +VK ++ PD + LI G+C G+L EA L EM
Sbjct: 138 EKLVTEAYELYSQMIVKKIS----PDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINP 193
Query: 79 GVVAYNAMLDCVCE-------------LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
V +N ++D +C+ + +Q + ++A+ VL + GVP + +++
Sbjct: 194 NVYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEV---NKAKHVLSTITQMGVPPDAQSY 250
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
N++I CKI+ +A LF+ M G PN T+ LI L + R+ E++D M+
Sbjct: 251 NIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRD 310
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
G D Y + LC V+ G + + TY++L+ L R+
Sbjct: 311 N--GQQPDICTYNSLIDALCKNHHVDQ-----------GIQLDMYTYNILIDGLCKQGRL 357
Query: 246 DKANALFHEAQSRGLAVTPKEYAV 269
A +F + +G +T Y +
Sbjct: 358 KDAQVIFQDLLIKGYNLTVWTYTI 381
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 22/238 (9%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
LA V ++ +LI G C GK EA + ++ + V+ +N ++D LC++
Sbjct: 82 LAHVFHLNQVTYAILINGLCKMGKTTEALQFLRKIDGKLVNINVLMHNTIID---SLCKE 138
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
K L +EA ++ +M + + +V TFN LI C + + +A LFH M PN
Sbjct: 139 K----LVTEAYELYSQMIVKKISPDVVTFNSLIYGFCFVGQLIEAFGLFHEMVLKNINPN 194
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKS---------------AGFGASLDKKAYYQFL 201
TF +L+ +L + ++ ++ M G D ++Y +
Sbjct: 195 VYTFNILVDALCKEGNVKGAKNLLAMMMKQVNEVNKAKHVLSTITQMGVPPDAQSYNIMI 254
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
C I+ V A +F M+ G P TY L+ L R+ A L E + G
Sbjct: 255 NGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYAWELVDEMRDNG 312
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C + A + ++ R I P+ LI G C G++ A
Sbjct: 242 GVPPDAQSYNIMINGFCKIKMVNEAFSLFNEMRCRGISPNTVTYSSLIDGLCKLGRISYA 301
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE---------------------LCRQKDPFLLH 103
L EM G + + YN+++D +C+ LC+Q
Sbjct: 302 WELVDEMRDNGQQPDICTYNSLIDALCKNHHVDQGIQLDMYTYNILIDGLCKQGRL---- 357
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+A+ + ++ +G V T+ ++I LC ++A L +M + GC P+ T +
Sbjct: 358 KDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLDEAEALLSKMEDNGCVPDAVTCETI 417
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGF 188
IR+L++ + E ++++ M G
Sbjct: 418 IRALFENDKNERAEKLLREMIVRGL 442
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 118/300 (39%), Gaps = 42/300 (14%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
MER+ G+ D S ++ C +G A RM ++ I P+ LI G+C +
Sbjct: 261 MERE-GINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKDAI-PNHVTYTTLIDGYCKANE 318
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
EEA RL M G GVV YN++L +C R +D A K+L EM R V
Sbjct: 319 FEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRD-------ANKLLHEMSERKVQA 371
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+ T N LI CKI ALK +M E G PN T+ LI + + LE E++
Sbjct: 372 DSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELL 431
Query: 181 DRMKSAGF---------------------------------GASLDKKAYYQFLTILCGI 207
M AGF G L+ Y + LC I
Sbjct: 432 FGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKI 491
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
ER+E A K+ M+ G Y L + A+ + E R L +T K Y
Sbjct: 492 ERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIY 551
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 11/216 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P C +L+ DG ++ M + G + YN ++ C R +
Sbjct: 163 PHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIH-ACSKSRDVE---- 217
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
AE +L EM+ +GV ++ T+N LI CK +AL + +M G + ++
Sbjct: 218 --RAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNS 275
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + ++ E M +K A + Y + C E AL++ MM A
Sbjct: 276 LIYGFCKEGKMREAMRMFGEIKD----AIPNHVTYTTLIDGYCKANEFEEALRLREMMVA 331
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
G PG+ TY+ ++ KL + R+ AN L HE R
Sbjct: 332 KGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSER 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 11/228 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ PD + LI +C G EA + +M R G L +V+YN+++ C+ + ++
Sbjct: 231 VVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAM 290
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ E + +P +V T+ LI CK + E+AL+L M G YP T+
Sbjct: 291 RMFGEIKD--------AIPNHV-TYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTY 341
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
++R L R+ + ++++ M A D + C I + ALK M
Sbjct: 342 NSILRKLCSDGRIRDANKLLHEMSERKVQA--DSVTCNTLINAYCKIGDLNSALKFKTKM 399
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
G P TY L+ + ++ A L G + + Y+
Sbjct: 400 LEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYS 447
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
EKL ++ + Y+E + K ++ P LI G+C+ G+ ++A RL EM
Sbjct: 207 EKLVTEAYELYSEMITKTIS----PTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKNINP 262
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N ++D +C+ + K D + L +E K +
Sbjct: 263 NVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALF 322
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M RGV NV ++V+I LCK + ++A+ F M PN T+ LI L ++
Sbjct: 323 NTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKS 382
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ E++D M G A++ + L LC V+ A+++ +K +P +
Sbjct: 383 GRISHAWELLDEMHDRGQPANV--ITFSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMY 440
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY++L+ L R+ A +F + +G +T Y +
Sbjct: 441 TYNILIDGLCKQGRLKDAQVIFQDLFIKGYNLTVWTYNI 479
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 126/296 (42%), Gaps = 39/296 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + +V+ C ++A ++ + +V F PD LIKG C++GK++EA
Sbjct: 84 GITPSIVTFNIVINCYCHLSEMNFAFSLLGKILKVGFHPDIVTLTTLIKGMCLNGKVKEA 143
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE-------------------------------- 92
+ GF L V+Y +++ +C+
Sbjct: 144 LHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTDVVMYNTIIDS 203
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
LC++K L +EA ++ EM + + V TF+ LI C + + +DA +LF+ M
Sbjct: 204 LCKEK----LVTEAYELYSEMITKTISPTVVTFSSLIYGFCIVGQFKDAFRLFNEMVLKN 259
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
PN TF +L+ +L + +++E ++ M G D + + C + V
Sbjct: 260 INPNVYTFNILVDALCKEGKMKEAKNVLAMMVKQGVKP--DIVTHTSLMDGYCLVNEVNK 317
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A +F M G P + Y ++++ L + +D+A F E QS+ + Y+
Sbjct: 318 AKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEAMDFFKEMQSKKIIPNTVTYS 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 123/256 (48%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C + A+ + + R + P+ ++I G C + ++EA
Sbjct: 294 GVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGLCKNKLIDEA 353
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
EM V Y++++D +C+ R S A ++L EM RG P NV T
Sbjct: 354 MDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRI-------SHAWELLDEMHDRGQPANVIT 406
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F+ L+ LCK R + A++L ++ + PN T+ +LI L + RL++ + +
Sbjct: 407 FSSLLHALCKNRHVDKAIELVKKLKDRDIQPNMYTYNILIDGLCKQGRLKDAQVIFQDLF 466
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +L Y + LC ++ AL + + M+ +GC P T+++++ L ++
Sbjct: 467 IKGY--NLTVWTYNIMINGLCLEGLLDEALALLSKMEDNGCIPNAVTFEIIVHALFKNDE 524
Query: 245 VDKANALFHEAQSRGL 260
+KA L E +RGL
Sbjct: 525 NEKAEKLLREMIARGL 540
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 125/274 (45%), Gaps = 18/274 (6%)
Query: 1 MERDYGLKRDRGSLKVVVEKLC-----SKGFASYAERMVKDLARVIFPDEAMCDMLIKGW 55
+ER + D ++++ LC + F Y+E + K ++ PD LI G+
Sbjct: 188 IERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRIS----PDVFTYTSLIHGF 243
Query: 56 CVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY 115
C+ G+L+E L EM V +N ++D + + + K EA+ ++ M
Sbjct: 244 CIVGQLKEVFVLLNEMVLKNINPDVYTFNTLVDALFKEGKVK-------EAKCLIAVMMK 296
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
GV N+ T++VL+ C + + A +F+ M + G P+ ++ ++I L + L+E
Sbjct: 297 EGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDE 356
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
+ + M S +LD Y + LC R+ A K+F M G P + TY+ L
Sbjct: 357 AVSLFEEMHSTNM--TLDVITYSSLINGLCKSGRLISAWKLFDEMLDRGQPPDVITYNSL 414
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ L ++ DKA AL + + +G+ Y +
Sbjct: 415 LDALCKSHQTDKAIALLSKMKDQGIQADIFTYNI 448
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 9/224 (4%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
+ R + PD ++I G C L+EA L EM+ L V+ Y+++++ +C+ R
Sbjct: 330 MQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSGRL 389
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
A K+ EM RG P +V T+N L+ LCK +T+ A+ L +M + G +
Sbjct: 390 -------ISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQAD 442
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ +LI L + RL++ ++ + + ++D Y + LC ++ AL +
Sbjct: 443 IFTYNILIDGLCKDGRLDDAQKIFRDLLIKSY--NVDVVTYNVMINGLCKESLLDEALTL 500
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M+A GC P TY++++ L DKA L E +RGL
Sbjct: 501 LSKMEAKGCIPDAITYEIIIRALFGKGVNDKAEKLLREMIARGL 544
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 108/233 (46%), Gaps = 17/233 (7%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + L+ +GK++EA+ L M + G E +V Y+ ++D C +
Sbjct: 264 INPDVYTFNTLVDALFKEGKVKEAKCLIAVMMKEGVEPNIVTYSVLMDGYCLVNEV---- 319
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++A+ + M RG+ +++++ ++I LCK++ ++A+ LF M + T+
Sbjct: 320 ---NKAKDIFNSMMQRGMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITY 376
Query: 161 VVLIRSLYQAARLEEG----DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
LI L ++ RL DEM+DR G D Y L LC + + A+ +
Sbjct: 377 SSLINGLCKSGRLISAWKLFDEMLDR------GQPPDVITYNSLLDALCKSHQTDKAIAL 430
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ MK G + I TY++L+ L R+D A +F + + V Y V
Sbjct: 431 LSKMKDQGIQADIFTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNV 483
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 14/230 (6%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + + LIKG C++ ++EA ++ GF+L V+Y +++ +C++ + + L
Sbjct: 125 PDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGFQLSKVSYGTLINGLCKVGQTQAALQL 184
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
E+ L+ +R +V ++++I NLCK + DA L+ M P+ T+
Sbjct: 185 LRRIERQLL---FRP---DVVMYSIIIDNLCKDKHVNDAFDLYSEMIRKRISPDVFTYTS 238
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAM 219
LI +L+E +++ M + Y F T++ + +V+ A + A+
Sbjct: 239 LIHGFCIVGQLKEVFVLLNEMVLKNINPDV-----YTFNTLVDALFKEGKVKEAKCLIAV 293
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M +G EP I TY +LM N V+KA +F+ RG+ + Y +
Sbjct: 294 MMKEGVEPNIVTYSVLMDGYCLVNEVNKAKDIFNSMMQRGMTPDIQSYTI 343
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 31/217 (14%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
M+R G+ D S +++ LC A + +++ + D LI G C G
Sbjct: 330 MQR--GMTPDIQSYTIMINGLCKMKMLDEAVSLFEEMHSTNMTLDVITYSSLINGLCKSG 387
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR----------------QKDPFLLH 103
+L A +L EM G V+ YN++LD +C+ + Q D F +
Sbjct: 388 RLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADIFTYN 447
Query: 104 ------------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
+A+K+ ++ + +V T+NV+I LCK ++AL L +M
Sbjct: 448 ILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSKMEAK 507
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
GC P+ T+ ++IR+L+ ++ ++++ M + G
Sbjct: 508 GCIPDAITYEIIIRALFGKGVNDKAEKLLREMIARGL 544
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
++ +N +L + ++ K+ F S + +M+++ + ++ T ++LI +R+ +
Sbjct: 55 IIEFNQILTSLVKI--DKNNF---STVISLFRQMEFQRIHPSIVTLSILINCYSHLRQMK 109
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A LF ++ + GC+P+ F LI+ L ++E D++ + GF L K +Y
Sbjct: 110 FAFSLFGKILKMGCHPDVIIFNTLIKGLCLNNDVKEALHFHDKLVAQGF--QLSKVSYGT 167
Query: 200 FLTILCGIERVEHALKVFAMMKADGC-EPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ LC + + + AL++ ++ P + Y +++ L V+ A L+ E
Sbjct: 168 LINGLCKVGQTQAALQLLRRIERQLLFRPDVVMYSIIIDNLCKDKHVNDAFDLYSE 223
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL ++ + Y+E + K ++ P+ + LI G+C+ G+ ++A RL E+
Sbjct: 216 DKLVTEAYVLYSEMITKRIS----PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N M+D +C+ + K D + L +E K VL
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ + V + +++++I LCK++ ++AL LF+ M G PN T+ LI L ++
Sbjct: 332 IIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKS 391
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R +++D M G ++ Y + LC +++ A+ + +K G +P +
Sbjct: 392 GRYSYAWDLVDEMHDHGHPPNI--FTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMC 449
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY++L+ L R+ A +F + +G ++ + Y +
Sbjct: 450 TYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNI 488
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 39/297 (13%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G+ D + +++ C ++ M+ + ++ + PD + LIKG CV+GK++E
Sbjct: 92 HGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCE------------------------------- 92
A + GF L V+Y +++ +C+
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 93 -LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
LC+ K L +EA + EM + + NV TFN LI C + + +DA +LFH +
Sbjct: 212 SLCKDK----LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLK 267
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
P+ TF +++ +L + +++E +I M D Y + C + V
Sbjct: 268 NINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMP--DVVTYNSLMDGYCLVNEVN 325
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A V ++ P +Y ++++ L VD+A +LF+E + RG+A Y+
Sbjct: 326 KAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYS 382
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++I G C ++EA L EM G V Y++++D +C+ R
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR------- 393
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+S A ++ EM G P N+ T+N LI LCK + + A+ L ++ + G P+ T+ +
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + RL ++ + G+ SLD + Y + LC + + A + + M+
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGY--SLDVQTYNIMINGLCKVGLFDEAEVLLSKMED 511
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G P TY+ ++ + +KA L E +RGL
Sbjct: 512 NGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIARGL 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ + + +++ LC G SYA +V ++ P + LI C + ++++A
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + YN ++D +C+ R LH+ A V ++ +G +V+T
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGR------LHN-ARDVFQDLLIKGYSLDVQT 485
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I LCK+ ++A L +M + G P+ T+ +IR+ + E+ ++++ M
Sbjct: 486 YNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMI 545
Query: 185 SAGF 188
+ G
Sbjct: 546 ARGL 549
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++ A M+R ++ +N +L + + P A + ++++ G+
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYP-----TAISLFHQLEFHGITP 96
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
++ TFN+LI C +R+ + + + ++ + G P+ TF LI+ L +++E
Sbjct: 97 DIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFH 156
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D + S GF LD+ +Y + LC I AL++ ++ + Y ++ L
Sbjct: 157 DHVISLGF--HLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLC 214
Query: 241 AHNRVDKANALFHEAQSRGLA 261
V +A L+ E ++ ++
Sbjct: 215 KDKLVTEAYVLYSEMITKRIS 235
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL ++ + Y+E + K ++ P+ + LI G+C+ G+ ++A RL E+
Sbjct: 216 DKLVTEAYVLYSEMITKRIS----PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N M+D +C+ + K D + L +E K VL
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ + V + +++++I LCK++ ++AL LF+ M G PN T+ LI L ++
Sbjct: 332 IIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKS 391
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R +++D M G ++ Y + LC +++ A+ + +K G +P +
Sbjct: 392 GRYSYAWDLVDEMHDHGHPPNI--FTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMC 449
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY++L+ L R+ A +F + +G ++ + Y +
Sbjct: 450 TYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNI 488
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 39/297 (13%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G+ D + +++ C ++ M+ + ++ + PD + LIKG CV+GK++E
Sbjct: 92 HGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCE------------------------------- 92
A + GF L V+Y +++ +C+
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 93 -LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
LC+ K L +EA + EM + + NV TFN LI C + + +DA +LFH +
Sbjct: 212 SLCKDK----LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLK 267
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
P+ TF +++ +L + +++E +I M D Y + C + V
Sbjct: 268 NINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMP--DVVTYNSLMDGYCLVNEVN 325
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A V ++ P +Y ++++ L VD+A +LF+E + RG+A Y+
Sbjct: 326 KAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYS 382
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++I G C ++EA L EM G V Y++++D +C+ R
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR------- 393
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+S A ++ EM G P N+ T+N LI LCK + + A+ L ++ + G P+ T+ +
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + RL ++ + G+ SLD + Y + LC + + A + + M+
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGY--SLDVQTYNIMINGLCKVGLFDEAEVLLSKMED 511
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G P TY+ ++ + +KA L E +RGL
Sbjct: 512 NGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIARGL 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ + + +++ LC G SYA +V ++ P + LI C + ++++A
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + YN ++D +C+ R LH+ A V ++ +G +V+T
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGR------LHN-ARDVFQDLLIKGYSLDVQT 485
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I LCK+ ++A L +M + G P+ T+ +IR+ + E+ ++++ M
Sbjct: 486 YNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMI 545
Query: 185 SAGF 188
+ G
Sbjct: 546 ARGL 549
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++ A M+R ++ +N +L + + P A + ++++ G+
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYP-----TAISLFHQLEFHGITP 96
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
++ TFN+LI C +R+ + + + ++ + G P+ TF LI+ L +++E
Sbjct: 97 DIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFH 156
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D + S GF LD+ +Y + LC I AL++ ++ + Y ++ L
Sbjct: 157 DHVISLGF--HLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLC 214
Query: 241 AHNRVDKANALFHEAQSRGLA 261
V +A L+ E ++ ++
Sbjct: 215 KDKLVTEAYVLYSEMITKRIS 235
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 34/279 (12%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL ++ + Y+E + K ++ P+ + LI G+C+ G+ ++A RL E+
Sbjct: 216 DKLVTEAYVLYSEMITKRIS----PNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLKNINP 271
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N M+D +C+ + K D + L +E K VL
Sbjct: 272 DVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMPDVVTYNSLMDGYCLVNEVNKAKHVL 331
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ + V + +++++I LCK++ ++AL LF+ M G PN T+ LI L ++
Sbjct: 332 IIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKS 391
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R +++D M G ++ Y + LC +++ A+ + +K G +P +
Sbjct: 392 GRYSYAWDLVDEMHDHGHPPNI--FTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMC 449
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY++L+ L R+ A +F + +G ++ + Y +
Sbjct: 450 TYNILIDGLCKGGRLHNARDVFQDLLIKGYSLDVQTYNI 488
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 128/297 (43%), Gaps = 39/297 (13%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G+ D + +++ C ++ M+ + ++ + PD + LIKG CV+GK++E
Sbjct: 92 HGITPDIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKE 151
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCE------------------------------- 92
A + GF L V+Y +++ +C+
Sbjct: 152 ALHFHDHVISLGFHLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIID 211
Query: 93 -LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
LC+ K L +EA + EM + + NV TFN LI C + + +DA +LFH +
Sbjct: 212 SLCKDK----LVTEAYVLYSEMITKRISPNVVTFNSLIYGFCIVGQFKDAFRLFHEIVLK 267
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
P+ TF +++ +L + +++E +I M D Y + C + V
Sbjct: 268 NINPDVYTFNIMVDALCKEGKMKEAKSVIAVMMKECVMP--DVVTYNSLMDGYCLVNEVN 325
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A V ++ P +Y ++++ L VD+A +LF+E + RG+A Y+
Sbjct: 326 KAKHVLIIISKIRVAPDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYS 382
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 103/218 (47%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++I G C ++EA L EM G V Y++++D +C+ R
Sbjct: 341 PDAHSYSIMINGLCKVKMVDEALSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR------- 393
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+S A ++ EM G P N+ T+N LI LCK + + A+ L ++ + G P+ T+ +
Sbjct: 394 YSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNI 453
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + RL ++ + G+ SLD + Y + LC + + A + + M+
Sbjct: 454 LIDGLCKGGRLHNARDVFQDLLIKGY--SLDVQTYNIMINGLCKVGLFDEAEVLLSKMED 511
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+G P TY+ ++ + +KA L E +RGL
Sbjct: 512 NGIIPDAVTYETIIRAFFHKDENEKAEKLLREMIARGL 549
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 91/184 (49%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G+ + + +++ LC G SYA +V ++ P + LI C + ++++A
Sbjct: 373 GIAPNTVTYSSLIDGLCKSGRYSYAWDLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKA 432
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ G + + YN ++D +C+ R LH+ A V ++ +G +V+T
Sbjct: 433 IALVKKIKDQGIQPDMCTYNILIDGLCKGGR------LHN-ARDVFQDLLIKGYSLDVQT 485
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I LCK+ ++A L +M + G P+ T+ +IR+ + E+ ++++ M
Sbjct: 486 YNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAFFHKDENEKAEKLLREMI 545
Query: 185 SAGF 188
+ G
Sbjct: 546 ARGL 549
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 89/201 (44%), Gaps = 7/201 (3%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++ A M+R ++ +N +L + + P A + ++++ G+
Sbjct: 42 VDNAVSSFNHMFRMNPSPSIIQFNKILGSLVKSNNNHYP-----TAISLFHQLEFHGITP 96
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
++ TFN+LI C +R+ + + + ++ + G P+ TF LI+ L +++E
Sbjct: 97 DIVTFNILINCYCHLREMDFSFSMLAKILKMGYQPDTITFNTLIKGLCVNGKVKEALHFH 156
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D + S GF LD+ +Y + LC I AL++ ++ + Y ++ L
Sbjct: 157 DHVISLGF--HLDQVSYGTLINGLCKIGETRAALQMLRKIEGKLVNTNVVMYSTIIDSLC 214
Query: 241 AHNRVDKANALFHEAQSRGLA 261
V +A L+ E ++ ++
Sbjct: 215 KDKLVTEAYVLYSEMITKRIS 235
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
DE + L+ +C +G + E + + M + G + ++ YN+++D C L ++ D
Sbjct: 272 DEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYC-LVKEVD----- 325
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+A+ + M RGV NV +++++I CK++ ++A+ LF M P+ + L
Sbjct: 326 -KAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSL 384
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I ++ R+ + E++D M G ++ Y L LC I VE + + +K
Sbjct: 385 IDGFCKSGRIPQALELVDEMHDRGQPPNI--ITYNSILYALCKIHHVEKTIALLRKIKVK 442
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
G +P TY +L + L R+++A +F
Sbjct: 443 GIQPDAYTYTILTNGLFKDGRLEEAREIF 471
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K D + V++ G +A + + L R PD + LI G C+ G++ +A
Sbjct: 93 GIKPDLFTYNVLINCFSQLGHTHFAFSLFANILKRGYHPDIVTFNTLINGLCLKGEVHKA 152
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ F+L V+Y +++ +C++ + L E + +V+ D V
Sbjct: 153 LNFFEKLVVLKFQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYD-------VVM 205
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I LCK + +DA L+ M P+ T+ +I RL++ + + MK
Sbjct: 206 YTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMK 265
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
A D+ + ++ C V V A+M +G +P I TY+ LM
Sbjct: 266 LENVEA--DEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKE 323
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
VDKA +F+ RG+ + Y++
Sbjct: 324 VDKAKNIFNTMVQRGVTANVRSYSI 348
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 119/292 (40%), Gaps = 31/292 (10%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEAR 65
+ DR S + ++ LC G A R++K++ +++ D M +I G C D +++A
Sbjct: 164 FQLDRVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAF 223
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS--------------------- 104
L EM V YNAM+ C + R KD L +
Sbjct: 224 DLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAF 283
Query: 105 -------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
E + V+ M GV ++ T+N L+ C +++ + A +F+ M + G N
Sbjct: 284 CKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANV 343
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
++ ++I + ++E + M D AY + C R+ AL++
Sbjct: 344 RSYSIMINGFCKVKMMDEAMNLFQEMHCKEIIP--DTIAYSSLIDGFCKSGRIPQALELV 401
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M G P I TY+ ++ L + V+K AL + + +G+ Y +
Sbjct: 402 DEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTI 453
>Medtr7g029515.1 | PPR containing plant protein | HC |
chr7:10579080-10580534 | 20130731
Length = 484
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 111/232 (47%), Gaps = 9/232 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L I P+ ++LI GWC ++EEA
Sbjct: 167 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAH 226
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
EM G V++Y+ ++ C C Q+ F +L EM + NV T+
Sbjct: 227 WTIQEMKGYGCRPCVISYSTIIQCYC----QEQNF---DRVYDLLDEMQAQNCSPNVVTY 279
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K ++AL++ RM GC P+ F I +L +A R+++ + ++
Sbjct: 280 TTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTLGRAGRIDDATYVF-KVAM 338
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
+ + Y +++ C R E A + M+ G C+P I+T+ L+
Sbjct: 339 PKANVAPNTSTYNSMVSMFCYYAREERAFGILKEMEKSGLCKPDIQTFHPLI 390
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ ++A R+ ++ G E + N +LD +C K+ F+ +A ++ +E+ + P
Sbjct: 152 QWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC-----KEKFV--EQAREIYLELKHYIAP 204
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
N TFN+LI C IR+ E+A M +GC P ++ +I+ Q + ++
Sbjct: 205 -NAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDL 263
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGI---ERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+D M++ ++ + TI+C + E+ + AL+V M A GC P ++ +
Sbjct: 264 LDEMQAQNCSPNV-----VTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFI 318
Query: 237 SKLGAHNRVDKANALFHEAQSRG 259
LG R+D A +F A +
Sbjct: 319 YTLGRAGRIDDATYVFKVAMPKA 341
>Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29954706-29953247 | 20130731
Length = 409
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + P+ +++I G C + + EA L +M+ ++YN+++D +C+ D
Sbjct: 196 RGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNSLIDGLCKSGSISD 255
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+ ++ EM R P NV T+N L+ LCK + + A+ L +M + G PN
Sbjct: 256 VW-------DLIDEMHNRCQPVNVITYNSLLDALCKNHQVDKAIALLKKMKDQGIQPNMY 308
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ +L+ L + RL + E+ + + G+ L+ Y + C + AL + +
Sbjct: 309 TYTILVDGLCKNGRLADAREIYHDLLTKGY--PLNVSMYNVMVNEFCKEGLFDEALSLLS 366
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M+ +GC P TY L+ L +N+ DKA L E RGL
Sbjct: 367 KMEDNGCTPDAITYQTLICALFENNKNDKAVKLLREMIVRGL 408
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 35/287 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D +L ++V C G +YA ++ + ++ + PD LIKG C G++E
Sbjct: 73 GIQTDIVNLNILVNCFCQLGQLNYAFSVLAKILKMGYQPDTVTLTTLIKGLCRSGQIEGL 132
Query: 65 ------------------RRLAGE-MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE 105
+L+G M + G E VV Y +++D + L E
Sbjct: 133 LVKPNVVMYSTIIDSLCKDKLSGAVMIKQGVEPNVVTYTSLMD----------GYFLVKE 182
Query: 106 AEK---VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
K + + RGV + ++NV+I LCK + +A LF M P+ ++
Sbjct: 183 VNKATYIFNTIAQRGVTPELHSYNVMINGLCKNKMVNEAANLFKDMHSRNMTPDTISYNS 242
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L ++ + + ++ID M + ++ Y L LC +V+ A+ + MK
Sbjct: 243 LIDGLCKSGSISDVWDLIDEMHNRC--QPVNVITYNSLLDALCKNHQVDKAIALLKKMKD 300
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P + TY +L+ L + R+ A ++H+ ++G + Y V
Sbjct: 301 QGIQPNMYTYTILVDGLCKNGRLADAREIYHDLLTKGYPLNVSMYNV 347
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 10/236 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
R +G+ D V+ C G S A ++ ++ R I PD +I G C GK+
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM 398
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EAR + EM G E V Y A++D C+ K+ F +H+ +M +G+ N
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHN-------QMVQKGLTPN 451
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+ L LCK + + A +L H M G PN T+ ++ L + +E+ ++++
Sbjct: 452 VVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLME 511
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
M AGF D Y + C + + A ++ +M +P + T+++LM+
Sbjct: 512 EMDLAGFYP--DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMN 565
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 116/269 (43%), Gaps = 14/269 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
+ G+ + S +V+ LC G A ++ + R FPD +++ G+C G+L+
Sbjct: 235 ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELD 294
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV-PRN 121
+ +L E+ G + YN + + LC+ + EAE++L M GV P N
Sbjct: 295 KVLKLVDELKGKGLKPDEYIYN---NIILLLCKNGEVV----EAEQLLRGMRKWGVFPDN 347
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V + +I+ CK+ A KLF M P+ T+ +I + ++ ++ E EM +
Sbjct: 348 V-VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M G D+ Y + C ++ A V M G P + TY L L
Sbjct: 407 EMLVKGLEP--DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAVD 270
+ +D AN L HE +GL P Y +
Sbjct: 465 NGEIDVANELLHEMSRKGLQ--PNVYTYN 491
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + +++ C G + A +++ L + + P ++L+ G+C+ G LE+
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG 576
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL M G +N+++ C K+ +E K M RGV + T
Sbjct: 577 ERLIEWMLEKGIMPNATTFNSLMKQYC----IKNNMRATTEIYKA---MHDRGVMPDSNT 629
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI CK R ++A L M E G T+ LIR Y+ + E ++ + M+
Sbjct: 630 YNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMR 689
Query: 185 SAGFGASLD 193
G A D
Sbjct: 690 KHGLVAEKD 698
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL ++ + Y+E + K ++ PD LI G+C+ G+L+EA L EM
Sbjct: 103 DKLVTEAYVLYSEMITKRIS----PDVVTFSALIYGFCIVGQLKEAFGLFHEMVLKNINP 158
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V +N ++D C+ K EA+ V+ M GV +V T+ L+ C + K
Sbjct: 159 DVYTFNILVDAFCKEGNTK-------EAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKV 211
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF--------GA 190
A + + G PN ++ ++I + ++E + + M G G
Sbjct: 212 NKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQ 271
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
+ Y FL LC +V+ A+ +K G +P I TY++L+ L R++ A
Sbjct: 272 HANVITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQV 331
Query: 251 LFHEAQSRGLAVTPKEYAV 269
+F + +G VT Y +
Sbjct: 332 IFQDLLIKGYKVTVWTYNI 350
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE---------- 92
PD + LIKG CV+GK++EA + GF L V+Y +++ +C+
Sbjct: 18 PDIITFNTLIKGLCVNGKVKEALHFHDHVISLGFHLDQVSYGTLINGLCKMGKTTEALQV 77
Query: 93 ----------------------LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
LC+ K L +EA + EM + + +V TF+ LI
Sbjct: 78 LRKIDGKLVNTDVVMYSTIIDSLCKDK----LVTEAYVLYSEMITKRISPDVVTFSALIY 133
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
C + + ++A LFH M P+ TF +L+ + + +E +I M G
Sbjct: 134 GFCIVGQLKEAFGLFHEMVLKNINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIP 193
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
D Y + C + +V A V +++ G P +Y+++++ VD+A
Sbjct: 194 --DVVTYGSLMDGYCLVNKVNKAKHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALN 251
Query: 251 LFHEAQSRGLA 261
LF+E RG+A
Sbjct: 252 LFNEMCCRGIA 262
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 117/259 (45%), Gaps = 6/259 (2%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
+ D + ++V+ C +G A+ ++ + + + PD L+ G+C+ K+ +A
Sbjct: 155 NINPDVYTFNILVDAFCKEGNTKEAKNVIAMMMKEGVIPDVVTYGSLMDGYCLVNKVNKA 214
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA---EKVLVEMDYRGVPRN 121
+ + + R G +YN +++ C++ + L +E +M RG N
Sbjct: 215 KHVLSLISRMGLTPNANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHAN 274
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+N + LCK + + A+ ++ + G P T+ +LI L + RLE +
Sbjct: 275 VITYNSFLHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQ 334
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+ G+ ++ Y + LC + A+ + M+ +GC P + TY+ ++ L
Sbjct: 335 DLLIKGYKVTV--WTYNIMINGLCLEGLFDQAMILLEKMEENGCIPDVVTYETIIRALFK 392
Query: 242 HNRVDKANALFHEAQSRGL 260
++ D+A L E +RGL
Sbjct: 393 NDENDRAEKLLREMIARGL 411
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ CS G + + + K + + PD+ ++LI C +G++ EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G + +V YNA+++ C R+ +H EA ++ M RG+ +V
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCS--REN----VH-EARELFNRMVKRGLEPDVLN 337
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NVLI CK + ++A+ LF + P ++ LI L + R+ +++D M
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D Y + LC R+ AL V MM G +P I TY+ +M N
Sbjct: 398 --GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+ A +F+ GL Y V
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNV 480
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + + + ++ C G A ++L A+ D+ LI G +G+++ A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + + +V Y+A++D +C KD F+ S+A + ++ RG+ + T
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLC-----KDGFV--SDALGLCSQIGERGILLDAVT 232
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI C + + ++ +L +M P++ TF +LI +L + R+ E ++ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D Y + C E V A ++F M G EP + Y++L+
Sbjct: 293 KR--GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
VD+A LF E ++ L T Y
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASY 373
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 123/263 (46%), Gaps = 11/263 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C + + A+ + + + + PD ++LI G+C ++EA
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + +YN+++D +C L R +++L EM G +V T
Sbjct: 495 IVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIP-------HVQELLDEMCDSGQSPDVIT 547
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+L+ CK + + A+ LF ++ E G +P+ T ++ +L + +L+ ++ + +
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHL- 605
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G S + + Y + LC A+ + + M+ + P T+++++ L N
Sbjct: 606 -LMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
DKA L E +RGL K Y
Sbjct: 665 TDKAEKLREEMIARGLVNIEKSY 687
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
S +++ LC+ G S+ ++++ ++ PD ++LI C +G++ EA +
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M + G + +V YNAM+D C R + A+ + M G+ ++ +NVLI
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYC--LRNN-----VNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
CK ++A+ LF M P+ ++ LI L R+ E++D M + G
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS--GQ 541
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
S D Y L C + + A+ +F + +G P T ++ L ++ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 251 LFHEAQSRGLAVTPKEYAV 269
G + + Y +
Sbjct: 601 ALKHLLMHGCSPNVQTYTI 619
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + +++ + ++A ++ + + + P+ + +I G+C++G + +A
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G+ Y +++ + + + K A +L EM+ V N+
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK-------AALHLLQEMEKSSVQPNLVM 197
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI LCK DAL L ++GE G + T+ LI R +E +++ +M
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D + + LC R+ A V AMM G +P I TY+ LM +
Sbjct: 258 RENVDP--DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V +A LF+ RGL Y V
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNV 340
>Medtr7g451470.1 | PPR containing plant-like protein | LC |
chr7:17351106-17346828 | 20130731
Length = 1071
Score = 93.6 bits (231), Expect = 2e-19, Method: Composition-based stats.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G + D ++++ LC KG+ A + ++ F P+ +LI G+C DGK+++A
Sbjct: 308 GFEPDAFMFNIMIDGLCKKGYLVSALEFLNEMVEKGFEPNVITYTILINGFCKDGKIQDA 367
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF--------------------LLHS 104
++ GEM G + + +N+++ +C+ + ++ L+H+
Sbjct: 368 FQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYHDMFLEGVIANTITYNTLIHA 427
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLI-----TNLCKIRKTEDALKLFHRMGEW 151
+A K++ EM +RG P + T+N LI T LCK K E+ L L+H M
Sbjct: 428 FLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLYHDMFLE 487
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
G N T+ LI + + +++ ++++ M GF LD Y + LC +E
Sbjct: 488 GVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGF--PLDNITYNGLIKALCKTGAIE 545
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
L + M G P I + ++L + + +V+ A + RGL
Sbjct: 546 KGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGL 594
Score = 68.9 bits (167), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 101/245 (41%), Gaps = 35/245 (14%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE--LCRQK--------- 97
+ LI + +++A +L EM GF L + YN ++ +C+ LC+
Sbjct: 422 NTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKTGLCKNDKMEETLGLY 481
Query: 98 -DPFL-------------LHS--------EAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
D FL +H+ +A K++ EM +RG P + T+N LI LCK
Sbjct: 482 HDMFLEGVIANTITYNTLIHAFLRGDSIQQAYKLVNEMLFRGFPLDNITYNGLIKALCKT 541
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
E L L M G +P+ + +L S ++ + + M G + D
Sbjct: 542 GAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDALRFLRDMIHRGL--TPDIV 599
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y + LC R++ AL +F ++ +G P TY+ L+S + + A L +
Sbjct: 600 TYNSLINGLCKNGRIQEALNLFNRLQTEGMCPNAVTYNTLISSFCYEDLFNDACLLLFKG 659
Query: 256 QSRGL 260
S G
Sbjct: 660 VSNGF 664
Score = 65.1 bits (157), Expect = 8e-11, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 28/269 (10%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKD-LARVIFPD--------EAMC---DMLIKGWCVDGK 60
S VV+E L S A + D L+R I P +A C + +I G C G+
Sbjct: 167 SYNVVLEILVSGNCPKVAPNVFYDMLSRGISPTVHTFGIVMKAFCMTFNDVIHGLCKAGR 226
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+ EA +L M GF + Y ++ +C + + + +L S+ +P
Sbjct: 227 IHEAAKLLDRMLLHGFTTDALIYGCLMPGLCRMGQVDEARVLLSK------------IPN 274
Query: 121 -NVETFNVLITNLCKIRKTEDALKLFHR-MGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
N +N LI + E+A L ++ M G P+ F ++I L + L E
Sbjct: 275 PNTVLYNTLINGYVASGRFEEAKDLLYQNMVIAGFEPDAFMFNIMIDGLCKKGYLVSALE 334
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++ M GF ++ Y + C +++ A +++ M + GC+P I T++ L+
Sbjct: 335 FLNEMVEKGFEPNV--ITYTILINGFCKDGKIQDAFQMYGEMSSKGCKPDIYTFNSLIYG 392
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKEY 267
L ++++++A L+H+ G+ Y
Sbjct: 393 LCKNDKMEEALGLYHDMFLEGVIANTITY 421
Score = 62.8 bits (151), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 30 AERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A ++V ++ FP D + LIK C G +E+ L EM+ G + + N + +
Sbjct: 512 AYKLVNEMLFRGFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSN 571
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
C + + D A + L +M +RG+ ++ T+N LI LCK + ++AL LF+R+
Sbjct: 572 SFCSIGKVND-------ALRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQEALNLFNRL 624
Query: 149 GEWGCYPNETTFVVLIRSL 167
G PN T+ LI S
Sbjct: 625 QTEGMCPNAVTYNTLISSF 643
Score = 60.8 bits (146), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + +++ LC G +++++ + IFP C++L +C GK+ +A
Sbjct: 523 GFPLDNITYNGLIKALCKTGAIEKGLGLIEEMFGKGIFPSINSCNILSNSFCSIGKVNDA 582
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R +M G +V YN++++ +C+ R + EA + + G+ N T
Sbjct: 583 LRFLRDMIHRGLTPDIVTYNSLINGLCKNGRIQ-------EALNLFNRLQTEGMCPNAVT 635
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+N LI++ C DA L + G PNE T+ +LI + + + +ID
Sbjct: 636 YNTLISSFCYEDLFNDACLLLFKGVSNGFIPNEITWSILINCFVKKYQRDYPPSIID 692
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 121/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ CS G + + + K + + PD+ ++LI C +G++ EA
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + G + +V YNA+++ C R+ +H EA ++ M RG+ +V
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNALMEGYCS--REN----VH-EARELFNRMVKRGLEPDVLN 337
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NVLI CK + ++A+ LF + P ++ LI L + R+ +++D M
Sbjct: 338 YNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMH 397
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D Y + LC R+ AL V MM G +P I TY+ +M N
Sbjct: 398 --GSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+ A +F+ GL Y V
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNV 480
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + + + ++ C G A ++L A+ D+ LI G +G+++ A
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + + +V Y+A++D +C KD F+ S+A + ++ RG+ + T
Sbjct: 180 LHLLQEMEKSSVQPNLVMYSALIDGLC-----KDGFV--SDALGLCSQIGERGILLDAVT 232
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI C + + ++ +L +M P++ TF +LI +L + R+ E ++ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D Y + C E V A ++F M G EP + Y++L+
Sbjct: 293 KR--GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
VD+A LF E ++ L T Y
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASY 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
S +++ LC+ G S+ ++++ ++ PD ++LI C +G++ EA +
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVM 430
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M + G + +V YNAM+D C R + A+ + M G+ ++ +NVLI
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYC--LRNN-----VNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
CK ++A+ LF M P+ ++ LI L R+ E++D M + G
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS--GQ 541
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
S D Y L C + + A+ +F + +G P T ++ L ++ A
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 251 LFHEAQSRGLAVTPKEYAV 269
G + + Y +
Sbjct: 601 ALKHLLMHGCSPNVQTYTI 619
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + +++ C + + A+ + + + + PD ++LI G+C ++EA
Sbjct: 435 GVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEA 494
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + +YN+++D +C L R +++L EM G +V T
Sbjct: 495 IVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI-------PHVQELLDEMCDSGQSPDVIT 547
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+L+ CK + + A+ LF ++ E G +P+ T ++ +L + +L+ ++ + +
Sbjct: 548 YNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLL 606
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G S + + Y + LC A+ + + M+ + P T+++++ L N
Sbjct: 607 M--HGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664
Query: 245 VDKANALFHEAQSRGLA 261
DKA L E +RGL
Sbjct: 665 TDKAEKLREEMIARGLV 681
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + +++ + ++A ++ + + + P+ + +I G+C++G + +A
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G+ Y +++ + + + K A +L EM+ V N+
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIK-------AALHLLQEMEKSSVQPNLVM 197
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI LCK DAL L ++GE G + T+ LI R +E +++ +M
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D + + LC R+ A V AMM G +P I TY+ LM +
Sbjct: 258 RENVDP--DDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSREN 315
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V +A LF+ RGL Y V
Sbjct: 316 VHEARELFNRMVKRGLEPDVLNYNV 340
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ D + V++ C A + K++ + + PD A + LI G C G++
Sbjct: 470 GLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHV 529
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCE---------LCRQ------KDPFLLHS----- 104
+ L EM G V+ YN +LD C+ L RQ D + H+
Sbjct: 530 QELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNL 589
Query: 105 -------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
AE L + G NV+T+ +LI LCK +A+ L +M + P+
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
TF ++I L Q ++ +++ + M + G +++K+ Y+
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARGL-VNIEKRLMYE 690
>Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC |
chr4:44263594-44262119 | 20130731
Length = 440
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 118/261 (45%), Gaps = 30/261 (11%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE---- 92
+ + IFPD LI G+C+ G+ +EA L +M L V +N ++D +C+
Sbjct: 120 IVKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEV 179
Query: 93 ---------LCRQ------------KDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVL 128
+ +Q D + L E K V + GV +V++++V+
Sbjct: 180 KQARNVLAVMIKQGVDPDIFTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQSYSVM 239
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I LCK + ++A+ LF + P+ T+ LI L ++ R+ + ++ID M + G
Sbjct: 240 INGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEMHNIGQ 299
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
A D Y L LC +V+ A+ + +K G +P + TY +L+ L + R+ A
Sbjct: 300 PA--DVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRLKDA 357
Query: 249 NALFHEAQSRGLAVTPKEYAV 269
++ +G + K Y+V
Sbjct: 358 QVVYQNLLIKGYHLDVKMYSV 378
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 9/220 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P ++I G C ++EA L E+ + YN+++D +C+ R D +
Sbjct: 229 VIPSVQSYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVW 288
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L E + G P +V T+N L+ LCK + + A+ L ++ + G PN T+
Sbjct: 289 DLIDEMHNI-------GQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTY 341
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ L + RL++ + + G+ LD K Y + LC + AL + + M
Sbjct: 342 TILVDGLCKNGRLKDAQVVYQNLLIKGY--HLDVKMYSVMVNGLCKEGLFDDALSLVSKM 399
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ + C P TY+ L+ L + + DK L E RG+
Sbjct: 400 EDNSCTPNAVTYETLIRALFENGKNDKTVKLLREMIVRGI 439
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 123/270 (45%), Gaps = 23/270 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G++ D + +++ C G +YA ++ + ++ F PD ++KG C+ G++ +A
Sbjct: 5 GIQTDVVNSSILINCFCHLGHLNYAFSVLTKILKLGFEPDTITLTTVMKGMCLTGQVRKA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAM--LDCV--------CELCRQKDPFLLHSEAEKVLVEMD 114
+ GF+L V + + D V C LC+ K L +A + EM
Sbjct: 65 LHFHDHVIAKGFKLNHVTFMGLWSTDYVNLEKQELPCSLCKNK----LIIDASALCSEMI 120
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
+ + +V T+ LI C + + ++A+ L ++M + TF L+ L + ++
Sbjct: 121 VKRIFPDVVTYTTLIHGFCIVGQFKEAVGLLNQMLLKNISLDVQTFNTLVDGLCKEGEVK 180
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCG---IERVEHALKVFAMMKADGCEPGIKT 231
+ ++ M G + + +++++ G ++ V A VF + G P +++
Sbjct: 181 QARNVLAVMIKQGVDPDI-----FTYISLMDGYFLVKEVNKATYVFNTIARSGVIPSVQS 235
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y ++++ L VD+A LF E Q + +A
Sbjct: 236 YSVMINGLCKKKMVDEAVNLFKELQIKNMA 265
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S V++ LC K A + K+L + + PD + LI G C G++ + L EM
Sbjct: 235 SYSVMINGLCKKKMVDEAVNLFKELQIKNMAPDTITYNSLIDGLCKSGRISDVWDLIDEM 294
Query: 72 YRGGFELGVVAYNAMLDCVCE----------LCRQKDPFLLHS----------------- 104
+ G V+ YN++LD +C+ L + KD + +
Sbjct: 295 HNIGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPNMYTYTILVDGLCKNGRL 354
Query: 105 -EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+A+ V + +G +V+ ++V++ LCK +DAL L +M + C PN T+ L
Sbjct: 355 KDAQVVYQNLLIKGYHLDVKMYSVMVNGLCKEGLFDDALSLVSKMEDNSCTPNAVTYETL 414
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGF 188
IR+L++ + ++ +++ M G
Sbjct: 415 IRALFENGKNDKTVKLLREMIVRGI 439
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 121/264 (45%), Gaps = 21/264 (7%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
YGL + ++ + K F+ + E ++K+ I P+ ++L+ C DGK++EA
Sbjct: 316 YGLYSEMIVKRIPPTVVTFKAFSLFHEMVLKN----INPNVYTFNILVDALCKDGKIKEA 371
Query: 65 RRLAGEMYRGGFEL--------GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYR 116
+ + +M L V+YN ++D C+ R S A K+L +M R
Sbjct: 372 KNVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRL-------SHAWKLLDQMRDR 424
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G P NV T+N L+ LCK + A+ L + + G P+ T+ L+ L + RL++
Sbjct: 425 GQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDA 484
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ + G+ +L Y + LC ++ A + + M+ +GC P + TY ++
Sbjct: 485 QLIFQDLLIKGY--NLPTWTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTII 542
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
L + DKA L E RGL
Sbjct: 543 HALFEKDENDKAEKLVRELIVRGL 566
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 114/287 (39%), Gaps = 65/287 (22%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCE---------- 92
P+ LIKG C++GK+ EA + GF L V Y +++ +C+
Sbjct: 224 PNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQV 283
Query: 93 ----------------------LCRQK---DPFLLHSE--------------AEKVLVEM 113
LC+ K D + L+SE A + EM
Sbjct: 284 LRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTFKAFSLFHEM 343
Query: 114 DYRGVPRNVETFNVLITNLCK-----------IRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ + NV TFN+L+ LCK I+ ++AL LF M C PN ++
Sbjct: 344 VLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEM---HCKPNTVSYNT 400
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI ++ RL +++D+M+ G ++ Y L LC V+ A+ + K
Sbjct: 401 LIDGFCKSGRLSHAWKLLDQMRDRGQPPNV--ITYNSLLHALCKNHHVDKAIALVNNFKD 458
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P + TY+ L+ L R+ A +F + +G + Y +
Sbjct: 459 QGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNI 505
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 130/284 (45%), Gaps = 42/284 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR--VIFPDEAMCDMLIKGWCVDGKLEE 63
G++ D S ++ CS G A +++ ++ ++PD ++LI G C G++ E
Sbjct: 240 GIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSE 299
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A + M + G++ +V+YNA+++ C EA++V +M R NV
Sbjct: 300 AYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSV-------GEAKQVFDKMVERTALPNVI 352
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
++ LI CK+R ++A+ L M P+ T+ L+ L ++ R ++++ M
Sbjct: 353 SYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAM 412
Query: 184 KSAG---------------------------------FGASLDKKAYYQFLTILCGIERV 210
+++G G S + + Y L LC R+
Sbjct: 413 RASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRL 472
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
++A ++F ++ A GC+P I+TY++++ L +D+A AL ++
Sbjct: 473 KYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYK 516
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
D G + D ++ LC G A +M + ++ ++P+ M + +I G C G ++
Sbjct: 168 DRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVD 227
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRN 121
EA L EM G EL V +YN+M+ C + R A K+L EM RG V +
Sbjct: 228 EACGLCTEMVENGIELDVYSYNSMIHGFCSVGR-------FQAAVKLLDEMVVRGKVYPD 280
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V TFN+LI LCK+ + +A + M + G P+ ++ L+ + + E ++ D
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+M A + +Y + C + V+ A+ + M P TY+ L+ L
Sbjct: 341 KMVER--TALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398
Query: 242 HNR 244
R
Sbjct: 399 SGR 401
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 10/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P +LI + G++ A L G + + GF++ V ++ +C R
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVL----- 157
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA +L E RG + + +I LCKI KT DA+++F +M + YPN +
Sbjct: 158 --EAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNT 215
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I L + ++E + M G LD +Y + C + R + A+K+ M
Sbjct: 216 VIDGLCKQGLVDEACGLCTEMVENGI--ELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVV 273
Query: 223 DG-CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G P + T+++L+ L RV +A + RG
Sbjct: 274 RGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D S ++ C G A+++ K + R P+ LI G+C ++EA
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK-------------------------DP 99
L EM+ V YN +LD + + R D
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDD 430
Query: 100 FLLHSEAEKVLVEMDYR---GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+ H + +K L + G+ N+ T+N+L+ LCK + + A ++F + GC PN
Sbjct: 431 YFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPN 490
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
T+ ++I L + L+E + ++ +M + +
Sbjct: 491 IRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 125/284 (44%), Gaps = 38/284 (13%)
Query: 15 KVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+++ LC F + A + + + + I P+ + LI G+C+ G+L+EA L +M
Sbjct: 201 NTIIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGLFYQMLL 260
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL----- 128
+ +N ++D +C+ + K EA+ V+ M GV +V T+N L
Sbjct: 261 KNINPDIYTFNILVDVLCKEGKIK-------EAKNVIAVMMKEGVEPDVVTYNSLMDGYC 313
Query: 129 -----------------------ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
I +LCKI+ ++AL LF+ M G P++ T+ LI
Sbjct: 314 LVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLID 373
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
L +A R+ E +D M + G A++ Y + LC V+ A+ + +K G
Sbjct: 374 GLCKARRIPCAWEFVDEMHANGIPANI--FTYNSLIDALCKNHHVDKAIVLVKKIKDQGI 431
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ + TY +L+ L R+ A +F + +G + Y++
Sbjct: 432 QSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKGYNLNVCTYSI 475
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 40/293 (13%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDG 59
+ + ++ D +L +++ C +A + + ++ F +A+ L+KG C++G
Sbjct: 82 LSKKLEIRPDIFTLNILINCYCHVQQMPFAFSIFAKILKMGFESDAITLTTLMKGLCLNG 141
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K++E+ + GF+L V Y +++ +C++ K L+ + E LVE D
Sbjct: 142 KVKESLHFHDHVLALGFQLDHVTYGTLINGLCKIGETKAALLMLRKIEGRLVESD----- 196
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
V N +I +LCK + DA +L+ M PN TF LI +L+E +
Sbjct: 197 --VVMHNTIIDSLCKHKFVTDAYELYSEMITKRISPNIITFNSLIYGFCIVGQLKEAFGL 254
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM--- 236
+M D + + +LC +++ A V A+M +G EP + TY+ LM
Sbjct: 255 FYQMLLKNINP--DIYTFNILVDVLCKEGKIKEAKNVIAVMMKEGVEPDVVTYNSLMDGY 312
Query: 237 ----------------SKLGAH---------NRVDKANALFHEAQSRGLAVTP 264
S++GA +D+A +LF+E +S+G +TP
Sbjct: 313 CLVKEVYEAKHVLNIISRMGAAPDIQSLCKIKMIDEALSLFNEMRSKG--ITP 363
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
I+ C ++EA L EM G V YN+++D +C+ ++ P A + +
Sbjct: 337 IQSLCKIKMIDEALSLFNEMRSKGITPDKVTYNSLIDGLCK--ARRIPC-----AWEFVD 389
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
EM G+P N+ T+N LI LCK + A+ L ++ + G + T+ +LI L +
Sbjct: 390 EMHANGIPANIFTYNSLIDALCKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQG 449
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
RL++ + + G+ +L+ Y + LC + A + + M+ +GC P T
Sbjct: 450 RLKDAQVIFQDLLIKGY--NLNVCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVT 507
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGL 260
Y+ + L ++ DKA L E +RGL
Sbjct: 508 YEPINRALFKNDENDKAEQLLREMIARGL 536
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 87/187 (46%), Gaps = 8/187 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKL 61
R G+ D+ + +++ LC A V ++ P + LI C + +
Sbjct: 357 RSKGITPDKVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPANIFTYNSLIDALCKNHHV 416
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++A L ++ G + + Y+ ++D +C+ R KD A+ + ++ +G N
Sbjct: 417 DKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKD-------AQVIFQDLLIKGYNLN 469
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T++++I LC ++A L +M + GC P+ T+ + R+L++ ++ ++++
Sbjct: 470 VCTYSIMINGLCSKGLFDEATTLLSKMEDNGCIPDAVTYEPINRALFKNDENDKAEQLLR 529
Query: 182 RMKSAGF 188
M + G
Sbjct: 530 EMIARGL 536
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 53/279 (18%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + F Y+E +++ IFPD + LI G+C+ GKL++A L +M
Sbjct: 254 DKLDNDAFDLYSEM----VSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMTSENINP 309
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N ++D C+ R K D + L +E K +
Sbjct: 310 DVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIF 369
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M +RGV NV +++++I CKI+ + A+KLF M +PN T+ LI L ++
Sbjct: 370 NTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKS 429
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ E+ D M G + + + +K G P +
Sbjct: 430 GRISYALELNDEMHDRGQQPDI---------------------ITLTRQLKDQGIRPNMF 468
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L R++ A +F + +G +T Y V
Sbjct: 469 TYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTV 507
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L+ RR+ G++ + +V YN ++D +C+ D F L+SE M + +
Sbjct: 226 LQLLRRVDGKL----LQPNLVMYNTIIDSMCKDKLDNDAFDLYSE-------MVSKRIFP 274
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T+N LI C + K +DA+ LF++M P+ TF +L+ + + R++E +
Sbjct: 275 DVNTYNALINGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGL 334
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M G D Y + C + V A +F M G +++Y +++++
Sbjct: 335 AMMMKQGIKP--DVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFC 392
Query: 241 AHNRVDKANALFHEAQSRGL 260
VD+A LF E + +
Sbjct: 393 KIKMVDQAMKLFKEMHHKQI 412
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 9/222 (4%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
+++ P+ M + +I C D +A L EM V YNA+++ C + + K
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
D L + +M + +V TFN+L+ CK + ++A M + G P+
Sbjct: 294 DAIGLFN-------KMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ L+ + + + + M G A++ ++Y + C I+ V+ A+K+F
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANV--RSYSIMINRFCKIKMVDQAMKLF 404
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
M P + TY L+ L R+ A L E RG
Sbjct: 405 KEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRG 446
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S +++ + C A ++ K++ + IFP+ LI G C G++ A
Sbjct: 376 GVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYA 435
Query: 65 RRLAGEMY-RG---------------GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
L EM+ RG G + Y ++D +C+ R +D A
Sbjct: 436 LELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLED-------ARN 488
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ ++ +G V T+ V+I C ++A+ L +M + C PN T+ ++IRSL+
Sbjct: 489 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLF 548
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + SL +++ C G YA ++ + ++ + P+ + L+KG C++GK+ EA
Sbjct: 91 GIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNGKVNEA 150
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF L V Y +++ +C++ + K EA +VL ++ + V NV
Sbjct: 151 IHFHDHVLALGFHLDQVTYGTLINGLCKMGKTK-------EALQVLRRIEAKLVNTNVVM 203
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I +LCK + DA +L+ M P TF LI +L+E ++ +M
Sbjct: 204 YNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLKEAFGLVHQMV 263
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D + + LC V+ A +M +G P + TY+ +M N
Sbjct: 264 LKNINP--DVYTFNILVDALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNE 321
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA L G+A + Y++
Sbjct: 322 VNKAKHLLSIISRIGVAPSAYSYSI 346
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 40/282 (14%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL S + Y+E + K ++ P LI G+C+ G+L+EA L +M
Sbjct: 214 DKLVSDAYELYSEMITKKIS----PTVVTFSALIYGFCIVGQLKEAFGLVHQMVLKNINP 269
Query: 79 GVVAYNAMLDCVCELCRQKD-----PFLL--------------------H------SEAE 107
V +N ++D LC++ D FL+ H ++A+
Sbjct: 270 DVYTFNILVD---ALCKEGDVKGAKSFLVVMMKEGVIPDVVTYNSIMDGHCLVNEVNKAK 326
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+L + GV + +++++I CKI+ ++AL LF+ M G PN T+ LI L
Sbjct: 327 HLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEALSLFYEMRCRGIAPNTVTYSSLIDGL 386
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
++ R E++D M G ++ Y + LC ++ A+ + +K G +P
Sbjct: 387 CKSGRFSCAWELVDEMHVNGQPPNI--FTYSSLIDALCKNNHLDKAMTLVKKIKDQGIQP 444
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ TY++L+ L R+ A +F + ++G ++ + Y +
Sbjct: 445 DMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNI 486
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 121/256 (47%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ C + A+ ++ ++R+ + P ++I G+C ++EA
Sbjct: 301 GVIPDVVTYNSIMDGHCLVNEVNKAKHLLSIISRIGVAPSAYSYSIMINGFCKIKMIDEA 360
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G V Y++++D +C+ R S A +++ EM G P N+ T
Sbjct: 361 LSLFYEMRCRGIAPNTVTYSSLIDGLCKSGR-------FSCAWELVDEMHVNGQPPNIFT 413
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI LCK + A+ L ++ + G P+ T+ +LI L + RL+ ++ +
Sbjct: 414 YSSLIDALCKNNHLDKAMTLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLL 473
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ G+ SL+ ++Y + LC + A + + MK + P TY+ ++ L +
Sbjct: 474 TKGY--SLNIRSYNILINGLCKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHSLFYKDE 531
Query: 245 VDKANALFHEAQSRGL 260
+KA L E RGL
Sbjct: 532 NEKAEKLLREMLGRGL 547
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 74/157 (47%), Gaps = 2/157 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
++++ G+ N+ + ++LI C + + A + ++ + G +PN TF L++ L
Sbjct: 86 QLEFNGIKPNIVSLSILINCYCHLGQMRYAFSILAKIFKMGYHPNTITFNTLMKGLCLNG 145
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
++ E D + + GF LD+ Y + LC + + + AL+V ++A +
Sbjct: 146 KVNEAIHFHDHVLALGF--HLDQVTYGTLINGLCKMGKTKEALQVLRRIEAKLVNTNVVM 203
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
Y+ ++ L V A L+ E ++ ++ T ++
Sbjct: 204 YNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFS 240
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
L+ ++ G + +V+ + +++C C L + + F +L ++ G N TFN
Sbjct: 83 LSYQLEFNGIKPNIVSLSILINCYCHLGQMRYAF-------SILAKIFKMGYHPNTITFN 135
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
L+ LC K +A+ + G + ++ T+ LI L + + +E +++ R+++
Sbjct: 136 TLMKGLCLNGKVNEAIHFHDHVLALGFHLDQVTYGTLINGLCKMGKTKEALQVLRRIEAK 195
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
++ Y + LC + V A ++++ M P + T+ L+ ++
Sbjct: 196 LVNTNV--VMYNTVIDSLCKDKLVSDAYELYSEMITKKISPTVVTFSALIYGFCIVGQLK 253
Query: 247 KANALFHEAQSRGLAVTPKEYAVD 270
+A L H+ + + P Y +
Sbjct: 254 EAFGLVHQMVLKN--INPDVYTFN 275
>Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:28329250-28330881 | 20130731
Length = 543
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 13/285 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
+K + ++ +++ A+ A M L ++ + P+ + L+K C +G+++ A
Sbjct: 85 NMKPNFHTINILLNCFAQAKKANLAFSMFAKLLKLGYEPNIITFNSLLKAMCFNGEVQMA 144
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ + G L +V+Y ++ +C++ R H A VL +M VP +
Sbjct: 145 LDLHDKLKKAGVPLTIVSYGTLISGLCKINR-------HDAAMLVLKKMKV-CVPPDAII 196
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I LCK K E AL+L+ M E G +P+ T+ LI L + + E M
Sbjct: 197 YKTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMV 256
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S ++ Y + LC +RV + + M DG EP + ++ LM + ++
Sbjct: 257 SNEINPTV--YTYSALMAYLCKRKRVRESKALLNTMIKDGLEPDLAIFNTLMEGHCSLHQ 314
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRYXXXXXXXXXXXRETLP 289
+ KA +F+ RG +TP Y+ + + ETLP
Sbjct: 315 MQKAKRIFYSLPQRG--ITPDIYSYNILFKGLLSQGLNIPEETLP 357
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 12/258 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG--KLE 62
GL+ D ++E CS A+R+ L R I PD ++L KG G E
Sbjct: 294 GLEPDLAIFNTLMEGHCSLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPE 353
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
E L +M ++ YN ++ +C R A + EM +G+ +
Sbjct: 354 ETLPLFEDMKSKKVSPDLITYNTIIHGMCNFSRM-------DCAWDFIGEMVDKGIQPDA 406
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N L+ LC+ +K ++A+ L +R+ G + TF +LI + +++ R E
Sbjct: 407 ATYNPLLKALCREKKIDEAIALTNRISGQGIQLDAYTFTILIDAFWKSGRFEAAQATFWD 466
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
G+ +L ++ L LC + A+K+ + MK GC P Y++++ L +
Sbjct: 467 AFKKGYDLTL--AVFHVMLKGLCENHMFDEAIKILSKMKKKGCTPNKAIYEVIVYALFEN 524
Query: 243 NRVDKANALFHEAQSRGL 260
+ ++KA L +E G
Sbjct: 525 DEIEKATKLVYEMSRMGF 542
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 111/258 (43%), Gaps = 12/258 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
K +++ LC A + ++ IFPD LI G C+ + A EM
Sbjct: 198 KTIIDCLCKDSKVETALELYTEMIESGIFPDVFTYTTLIHGLCISDNFKAAFEFFKEMVS 257
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
V Y+A++ +C+ R + E++ +L M G+ ++ FN L+ C
Sbjct: 258 NEINPTVYTYSALMAYLCKRKRVR-------ESKALLNTMIKDGLEPDLAIFNTLMEGHC 310
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY-QAARL-EEGDEMIDRMKSAGFGAS 191
+ + + A ++F+ + + G P+ ++ +L + L Q + EE + + MKS S
Sbjct: 311 SLHQMQKAKRIFYSLPQRGITPDIYSYNILFKGLLSQGLNIPEETLPLFEDMKSKK--VS 368
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D Y + +C R++ A M G +P TY+ L+ L ++D+A AL
Sbjct: 369 PDLITYNTIIHGMCNFSRMDCAWDFIGEMVDKGIQPDAATYNPLLKALCREKKIDEAIAL 428
Query: 252 FHEAQSRGLAVTPKEYAV 269
+ +G+ + + +
Sbjct: 429 TNRISGQGIQLDAYTFTI 446
>Medtr1g031720.1 | PPR containing plant-like protein | LC |
chr1:11120039-11114706 | 20130731
Length = 1001
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 22 CSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
C G A+ M D+ + + PD +L++G+C G L A+ L EM G +
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
+AY + V EL + +P S+A + EM G P ++ T+NVLI LCK+ +D
Sbjct: 453 IAYTTRI--VGEL-KLGNP----SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDD 505
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A +L +M G P+ T+ +I + + L + +E+ M G S+ Y
Sbjct: 506 ANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSV---VTYTV 562
Query: 201 LTILCGIE-RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
L + R++ A K F M+ G P + TY+ L+ L N +D A LF E +S+G
Sbjct: 563 LIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKG 622
Query: 260 LAVTPKEYA 268
V+P +Y
Sbjct: 623 --VSPNKYT 629
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 121/291 (41%), Gaps = 37/291 (12%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKL 61
R +G + S V+V L KG A+ +++ ++ + A + LI+G+C
Sbjct: 234 RMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMF 293
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD--------------PFLLH---- 103
EEA L EM G VV YN ++ +C L R D P L+
Sbjct: 294 EEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTL 353
Query: 104 ----------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
+EA + E+ + + +V T+N LI C+ + A + M + G
Sbjct: 354 IYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGL 413
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHA 213
P+ TF +L+R Q L E+ D M S G K + T + G ++ +
Sbjct: 414 CPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL-----KPDCIAYTTRIVGELKLGNP 468
Query: 214 LKVFAM---MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
K F M MKA+G P + TY++L++ L D AN L + + G+
Sbjct: 469 SKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIV 519
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + V++ LC G A +V+ + I PD +I + G L +A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M + G VV Y ++ R + F A+K EM +GV NV T
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYA--VRGRLDF-----AKKYFDEMQDKGVSPNVIT 594
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS----LYQAARLEEGDEMI 180
+N LI LCK + A LF M G PN+ T+ +LI Y L+ +M+
Sbjct: 595 YNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDML 654
Query: 181 DR 182
DR
Sbjct: 655 DR 656
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 15/197 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + ++ G AE + D L + I P +LI + V G+L+ A
Sbjct: 517 GIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFA 576
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ EM G V+ YNA+ + LC++ + A + EM+ +GV N T
Sbjct: 577 KKYFDEMQDKGVSPNVITYNAL---IYGLCKEN----MMDVAYNLFAEMESKGVSPNKYT 629
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ------AARLEEGDE 178
+ +LI ++ +DALKL+ M + P+ T L++ L + RLE
Sbjct: 630 YTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRLENVIR 689
Query: 179 MIDRMKSAGFGASLDKK 195
D KS GF +LD K
Sbjct: 690 EGDTWKSVGF-INLDSK 705
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 24/248 (9%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGK 60
ME+ +K D G L V+V C + +E VK + D+LI+ +
Sbjct: 108 MEKAIEVKVDGGVLDVLVGIGCGRN----SEVSVK-----------LLDLLIQVFAKKLI 152
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
LE+ + +M G V N +L +L + K + +E E+V M +
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVL----KLLKDKS---MVNEVEEVYSVMIKCQIRP 205
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+ TFN ++ + CK + A+++ M +GC PN+ ++ VL+ L + E+I
Sbjct: 206 TIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELI 265
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
++M G S Y + C E E A + M G P + TY+ +M L
Sbjct: 266 EQMSMLGLKVS--AHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC 323
Query: 241 AHNRVDKA 248
RV A
Sbjct: 324 RLGRVSDA 331
>Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29902734-29903683 | 20130731
Length = 276
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC---ELCRQK 97
I P+ +L+ G+C +G+++EA+ + M + G + VV YN+++D C E+ + K
Sbjct: 41 INPNVYTFTILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYNSLMDGYCIVKEVNKAK 100
Query: 98 DPFLLH-----------------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
+ + S A +++ EM RG ++ T+N ++ LCK
Sbjct: 101 KKCIANKFFRSTLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGK 160
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A+ L ++ + G PN T+ +L++ L ++ +LE+ ++ + + G +LD AY
Sbjct: 161 AIALLTKLKDQGIRPNMNTYTILVKGLCRSGKLEDARKVFEDL-----GYNLDVYAYTVM 215
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C + L + + M+ +GC P KTY++++ L + D A L E RGL
Sbjct: 216 IQGFCDKGLFDEVLALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 17/191 (8%)
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
VV Y+A++ C + + +D A +M + + NV TF +L+ CK +
Sbjct: 9 NVVTYSALISGFCIVGKLRD-------AIDFFNKMIFENINPNVYTFTILVDGFCKEGRV 61
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
++A + M + G P+ T+ L +G ++ + A +K
Sbjct: 62 KEAKNVLAMMMKQGIKPDVVTY----------NSLMDGYCIVKEVNKAKKKCIANKFFRS 111
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ +LC RV +AL++ M G +P I TY+ ++ L + KA AL + + +
Sbjct: 112 TLIDVLCKSRRVSYALELVDEMHDRGQQPDIITYNSILDALCKKHHAGKAIALLTKLKDQ 171
Query: 259 GLAVTPKEYAV 269
G+ Y +
Sbjct: 172 GIRPNMNTYTI 182
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 31/277 (11%)
Query: 13 SLKVVVEKLCSKGFASYAERMVK-DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G A+ M+ + + I D + L+ G+C+ ++ +A+ + M
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341
Query: 72 YRGGFELGVVAYNAMLDCVCEL--------------CRQKDPFLLH-------------- 103
G V +Y M++ +C++ CR+ P ++
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKI 401
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
S K++ EM RG P N+ T+N ++ LCK + A+ L + + G P+ T+ VL
Sbjct: 402 SCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVL 461
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I+ L Q+ +LE+ ++ + + G+ +LD Y + C + AL + + M+ +
Sbjct: 462 IKGLCQSGKLEDAQKVFEDLLVKGY--NLDVYTYTVMIQGFCVKGLFDAALALLSKMEDN 519
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
GC P KTY++++ L + D A L E +RGL
Sbjct: 520 GCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+L+ +C +GK++EA+ + G + L VV YN+++D C L ++ + +A+ +
Sbjct: 285 ILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC-LVKEIN------KAKDI 337
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
M RGV NV+++ +I LCKI+ ++A+ LF M PN T+ LI L +
Sbjct: 338 FDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGK 397
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
++ +++D M G ++ Y L LC V+ A+ + +K G P +
Sbjct: 398 LGKISCVLKLVDEMHDRGQPPNI--ITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDM 455
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +L+ L +++ A +F + +G + Y V
Sbjct: 456 YTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTV 495
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 10/264 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +++ G S + + + + F P+ + LIKG C+ G + +A
Sbjct: 100 GIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQA 159
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V+Y +++ +C++ R + A ++L +D + V N
Sbjct: 160 LNFHDKVVAQGFHLDQVSYGTLINGLCKVGRI-------TAALQLLKRVDGKLVQPNAVM 212
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I N+CK + DA L+ +M P++ T LI +L+E ++ +M
Sbjct: 213 YNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMI 272
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ + + C +V+ A + + + TY+ LM
Sbjct: 273 LENINPRM--YTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKE 330
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
++KA +F SRG+ + Y
Sbjct: 331 INKAKDIFDSMASRGVIANVQSYT 354
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
HS A + +M+ G+ + TFN+LI ++ + +F ++ + G PN TF
Sbjct: 86 HSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNT 145
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L + + D++ + GF LD+ +Y + LC + R+ AL++ +
Sbjct: 146 LIKGLCLKGHIHQALNFHDKVVAQGF--HLDQVSYGTLINGLCKVGRITAALQLLKRVDG 203
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
+P Y++++ + V+ A L+ + ++ ++P ++ +
Sbjct: 204 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK--RISPDDFTCN 249
>Medtr7g007400.1 | PPR containing plant-like protein | HC |
chr7:1471949-1474797 | 20130731
Length = 636
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 15/269 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
D GL+ + + ++E LC +G A M++++ + P+ LI G C G E
Sbjct: 208 DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTE 267
Query: 63 EARRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A RL ++ R + V+ Y AM+ C ++D + AE +L M +G+ N
Sbjct: 268 KAFRLFLKLVRSENHKPNVLTYTAMISGYC----REDKL---NRAEMLLSRMKEQGLVPN 320
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+ LI CK E A L + M G PN T+ ++ L + R++E +M++
Sbjct: 321 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 380
Query: 182 RMKSAGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
GF L DK Y ++ C E + AL +F M G +P I +Y L++
Sbjct: 381 D----GFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVF 436
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYA 268
NR+ ++ F EA G+ T K Y
Sbjct: 437 CRENRMKESEMFFEEAVRIGIIPTNKTYT 465
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + + +V LC +G A +M++D + PD+ ++L+ C + +A
Sbjct: 351 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 410
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M + G + + +Y ++ C R K+ + EA ++ + +P N +T
Sbjct: 411 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGI------IPTN-KT 463
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I C+ A+K FHR+ + GC P+ T+ +I L + ++ +E + D M
Sbjct: 464 YTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMI 523
Query: 185 SAGF 188
G
Sbjct: 524 EKGL 527
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
++ +VE G A MV ++ + + P+ + +IK G +E A L EM
Sbjct: 78 MRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMC 137
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
G + ++Y M+ C++ EA+K L M RG + TF ++I+
Sbjct: 138 VRGVQPDSISYRVMVVMYCKIGNIL-------EADKWLSVMLERGFVVDNATFTLIISRF 190
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
T AL F R+ + G PN F +I L + +++ EM++ M G+ ++
Sbjct: 191 SGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNV 250
Query: 193 DKKAYYQFLTILCGIERVEHALKVF-AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ + LC E A ++F +++++ +P + TY ++S +++++A L
Sbjct: 251 --YTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 308
Query: 252 FHEAQSRGLAVTPKEYAV 269
+ +GL Y
Sbjct: 309 LSRMKEQGLVPNTNTYTT 326
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 15/225 (6%)
Query: 36 DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCR 95
DL VIF + + G+C GK++EA RL M + G V YN + + +C+L R
Sbjct: 389 DLNLVIF------NTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHR 442
Query: 96 QKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+ EA+ +L M +GV NV TF + I CK +A +LF M + G P
Sbjct: 443 -------YDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP 495
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N T+ LI + + ++++ ++ M + G L Y + C + RV+ ALK
Sbjct: 496 NIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL--YTYSSLIHGECIVGRVDEALK 553
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+F M+ G + TY ++S L R D+A L+ E GL
Sbjct: 554 LFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGL 598
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 13/245 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
+ FA + E +D I P+ LI G C G++E A L EM G +L +V +
Sbjct: 340 RAFALFDEMSQRD----IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIF 395
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
N +D C + + L + EK +G+ +V T+N+L LCK+ + ++A
Sbjct: 396 NTTMDGYCRRGKMDEALRLQAIMEK-------KGINADVFTYNILANGLCKLHRYDEAKC 448
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
+ + M E G PN TF + I + L E + + M+ G ++ Y +
Sbjct: 449 ILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNI--ITYNTLIDA 506
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
C E+V+ A K+ + M G P + TY L+ RVD+A LF+E + +G+
Sbjct: 507 YCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566
Query: 264 PKEYA 268
Y
Sbjct: 567 VATYT 571
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 8/165 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + + +E C +G + AER+ +D+ + P+ + LI +C K+++A
Sbjct: 457 GVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQA 516
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ EM G + Y++++ C + R EA K+ EM +G+ RNV T
Sbjct: 517 HKIKSEMINKGLLPDLYTYSSLIHGECIVGRV-------DEALKLFNEMRLKGITRNVAT 569
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ +I+ L K + ++A KL+ M + G P++ F L+ S ++
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 35/298 (11%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
++G +D S +++ LC A + K L D +++ GWC+ +
Sbjct: 163 EHGCHQDLNSFNTILDVLCKTKRVEMANNLFKTLRGRFKCDSVSYNIMANGWCLIKRTPM 222
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCV--------------------CELCRQKDPFLLH 103
A ++ EM G + +V YN +L CE+ ++H
Sbjct: 223 ALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVH 282
Query: 104 S--------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+++V M G+ +V T+N LI LCK ++AL +F M GC P
Sbjct: 283 GFGVAGEVKRSKRVFDAMVKEGLVPSVATYNALIQVLCKKDSVQNALLVFDEMVGKGCVP 342
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N TT+ V+IR L + +E G E + RM+ G S+ + Y + C +E L+
Sbjct: 343 NLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSV--QTYNVVIRYYCDEGELEKGLE 400
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK---ANALFHEAQSRGLAVTPKEYAVD 270
+F M C P + TY++L+S + + + A L E RG P+++ +
Sbjct: 401 LFEKMGNGTCLPNLDTYNILISAMFVRKKSEDLVLAGKLLIEMVGRGFL--PRKFTFN 456
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 10/218 (4%)
Query: 56 CVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY 115
C ++E A L + RG F+ V+YN M + C + ++ P L +VL EM
Sbjct: 181 CKTKRVEMANNLFKTL-RGRFKCDSVSYNIMANGWCLI--KRTPMAL-----QVLKEMVE 232
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
RGV + T+N L+ + + +A + F M + C + T+ ++ A ++
Sbjct: 233 RGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKR 292
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
+ D M G S+ Y + +LC + V++AL VF M GC P + TY+++
Sbjct: 293 SKRVFDAMVKEGLVPSV--ATYNALIQVLCKKDSVQNALLVFDEMVGKGCVPNLTTYNVV 350
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ L +++ + G + + Y V RY
Sbjct: 351 IRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRY 388
>Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0054:54977-53081 | 20130731
Length = 521
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 13/241 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+K + F Y+E + K ++ PD LI+G+ + GKL++A L +M +
Sbjct: 236 DKHVNDAFDLYSEMVAKRIS----PDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKP 291
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V +N ++D C+ R K +A+ VL M + + NV TFN L+ CK RK
Sbjct: 292 DVYTFNILVDGFCKEGRLK-------KAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKM 344
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
++ +F M + G PN T+ L+ ++ + ++ + M G A++ +Y
Sbjct: 345 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANV--HSYN 402
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ C I++V+ A+K+F M P + TY+ L+ L ++ A L +E R
Sbjct: 403 IMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDR 462
Query: 259 G 259
G
Sbjct: 463 G 463
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 30/254 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAER-----MVKDLARVIFPDEAMCDMLIKGWCVDGK 60
+K D + ++V+ C +G A+ M++D+ P+ + + L+ G+C D K
Sbjct: 288 NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK----PNVSTFNTLVDGFCKDRK 343
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
++E + + M + G + VV Y +++D C L +Q + +A+K+ M RGV
Sbjct: 344 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC-LVKQVN------KAKKIFNTMSQRGVTA 396
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NV ++N++I CKI+K + A+KLF M P+ T+ LI L ++ ++ +++
Sbjct: 397 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLV 456
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+ M G ++ Y L L +K G +P + T +L+ L
Sbjct: 457 NEMHDRGQPPNI--ITYNSILNAL------------LTKLKDQGIQPNMHTDTILIKGLC 502
Query: 241 AHNRVDKANALFHE 254
+++ A +F +
Sbjct: 503 QSGKLEAARKVFED 516
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 127/293 (43%), Gaps = 31/293 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ C G +A ++ + ++ + PD + IKG+C+ G++ +A
Sbjct: 113 GINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQA 172
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH------------ 103
++ GF L V+Y +++ +C +L R+ D L+
Sbjct: 173 LNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG 232
Query: 104 -------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++A + EM + + +V T++ LI + K +DA+ LF++M P+
Sbjct: 233 MYKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPD 292
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF +L+ + RL++ ++D M ++ + + C +++ V
Sbjct: 293 VYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVS--TFNTLVDGFCKDRKMKEGKTV 350
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
FAMM G +P + TY LM +V+KA +F+ RG+ Y +
Sbjct: 351 FAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNI 403
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 10/232 (4%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
AR I P+E +LIK +C+ GKL+ A + EM G V YNA ++ + +
Sbjct: 166 ARCI-PNEDTYALLIKAYCMSGKLQSAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGN-- 222
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
+AE++ M G ++E++ +LI K K+ ALK+F M C PN
Sbjct: 223 -----FDKAEEIFKRMKRDGCKLSLESYTMLINLYGKAGKSYMALKVFDEMLSQKCKPNI 277
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ L+ + + E+ +E+ ++M+ AG D AY + A ++F
Sbjct: 278 CTYTALVNAFAREGLCEKAEEIFEQMQEAGLEP--DVYAYNALMEAYSRAGFPYGAAEIF 335
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++M+ GCEP +Y++L+ G D A A+F + G+ T K + V
Sbjct: 336 SLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMV 387
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 13/262 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD--LARVIFPDEAMCDMLIKGWCVD 58
M+RD G K S +++ L K SY V D L++ P+ L+ + +
Sbjct: 233 MKRD-GCKLSLESYTMLI-NLYGKAGKSYMALKVFDEMLSQKCKPNICTYTALVNAFARE 290
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G E+A + +M G E V AYNA+++ R P+ A ++ M + G
Sbjct: 291 GLCEKAEEIFEQMQEAGLEPDVYAYNALMEAYS---RAGFPY----GAAEIFSLMQHMGC 343
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ ++N+L+ K +DA +F M G P + +VL+ + + + + ++
Sbjct: 344 EPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGITPTMKSHMVLLSAYSKMGNVTKCED 403
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
++++M +G LD L + + + +V +M+ I T+++L+ +
Sbjct: 404 ILNQMCKSGL--KLDTFVLNSMLNLYGRLGQFGKMEEVLTVMEKGSYVVDISTFNILIHR 461
Query: 239 LGAHNRVDKANALFHEAQSRGL 260
G ++K F ++GL
Sbjct: 462 YGQAGFIEKMEEQFQLLLTKGL 483
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V +N+LI + ++A + ++ E C PNE T+ +LI++ + +L+ + +
Sbjct: 136 DVICYNLLIDAFGQKFLYKEAESTYLQLHEARCIPNEDTYALLIKAYCMSGKLQSAEAVF 195
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
M++ G +S Y ++ L + A ++F MK DGC+ +++Y +L++ G
Sbjct: 196 AEMRNYGLPSS--AVVYNAYINGLMKGGNFDKAEEIFKRMKRDGCKLSLESYTMLINLYG 253
Query: 241 AHNRVDKANALFHEAQSR 258
+ A +F E S+
Sbjct: 254 KAGKSYMALKVFDEMLSQ 271
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
YG+++D +L +++ L A ++ + + ++LI GWC E+A
Sbjct: 232 YGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKA 291
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R++ E GFE V YN ++ C KD + ++VL EM G P N T
Sbjct: 292 RKVMEERKEHGFEPDVFTYNNFIES---YCHDKD----FRKVDEVLEEMRGNGCPPNAVT 344
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +L+ K + AL+ + RM + G P+ + L+ L +A RL++ E+ D M
Sbjct: 345 YTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMP 404
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
G D Y ++ C + E AL++ M+ C+P ++TY L+
Sbjct: 405 KQ--GVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLL 454
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 14/210 (6%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
+ D L+KG + E A + E ++ L ++N +++ C++ +A
Sbjct: 244 LLDALVKGQSI----EIAHNVLDE-FKSSVPLSSPSFNILINGWCKVRN-------FEKA 291
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
KV+ E G +V T+N I + C + ++ M GC PN T+ +L+
Sbjct: 292 RKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLG 351
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+A +L + E +RMK G D Y + IL R++ A +VF M G
Sbjct: 352 YGKAGQLSKALEEYERMKKDGIVP--DTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVV 409
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
+ TY+ ++S AH++ + A L E +
Sbjct: 410 RDVVTYNTMISTACAHSKEETALRLLKEME 439
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 14/240 (5%)
Query: 3 RDYGLKRDRGSLKVVVEKLC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
+++G + D + +E C K F E + + P+ +L+ G+ G+L
Sbjct: 299 KEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQL 358
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A M + G Y++++ + + R KD A +V +M +GV R+
Sbjct: 359 SKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKD-------ACEVFDDMPKQGVVRD 411
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+N +I+ C K E AL+L M E C P+ T+ L++ + R++ ++D
Sbjct: 412 VVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLD 471
Query: 182 RMKSAGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
M F L D+ Y + L ++ A F M + G P T LL KL
Sbjct: 472 HM----FKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 527
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 10/260 (3%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
M G+K D L VV+ LC ++ ++ + ++ + P +LI G CV G
Sbjct: 117 MHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKG 176
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ A L + + G+ V Y +++ +C++ + SEA L +M+ R
Sbjct: 177 DVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKT-------SEAVGWLRKMEERNWN 229
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
NV ++ ++ LCK +AL L M G PN T+ LI+ L R +E +
Sbjct: 230 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 289
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+D M G D ++ + +LC ++ A V M G P + TY+ L+ +
Sbjct: 290 LDEMMKMGVMP--DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 347
Query: 240 GAHNRVDKANALFHEAQSRG 259
N++D+A +F SRG
Sbjct: 348 CLQNQMDEATRVFELMVSRG 367
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V++ LC G S A + +++ + I P+ LI+G C G+ +EA L EM +
Sbjct: 236 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 295
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G + + N ++D +C+ + +A+ V+ M G +V T+N LI C
Sbjct: 296 MGVMPDLQSLNILVDVLCKEGKIM-------QAKSVIGFMILVGEVPDVFTYNSLIDRYC 348
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ ++A ++F M GC P+ + LI + + + ++D M GF + D
Sbjct: 349 LQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGF--TPD 406
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
+ + C + R A ++F M G P ++T +++ L + +A +LFH
Sbjct: 407 VVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFH 466
Query: 254 EAQSRGLAVTPKEYAV 269
+ L + Y++
Sbjct: 467 AMEKSNLDLNIVIYSI 482
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 16/250 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++++ C + A R+ + + +R PD LI GWC + +A L EM + G
Sbjct: 343 LIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 402
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
F VV + ++ C++ R P A+++ + M G N++T +++ LCK
Sbjct: 403 FTPDVVTWTTLIGGFCQVGR---PL----AAKELFLNMHKYGQVPNLQTCAIILDGLCKS 455
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ +AL LFH M + N + +++ + A +L E+ + + G ++
Sbjct: 456 QLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINV--- 512
Query: 196 AYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y + ++ G + ++ A + + M+ +GC P TY++ + L A + ++
Sbjct: 513 --YAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYL 570
Query: 253 HEAQSRGLAV 262
+ +G +V
Sbjct: 571 TMMRDKGFSV 580
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ + NV+I +LC ++ + M + G P+ TF +LI L +
Sbjct: 122 GIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRA 181
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
E++D ++ G+ + D K Y + LC + + A+ M+ P + Y +M
Sbjct: 182 VELVDHVEKTGYRS--DVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVM 239
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
L V +A L E +G+
Sbjct: 240 DGLCKDGLVSEALGLCLEMSGKGI 263
>Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:24225916-24227245 | 20130731
Length = 393
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 13/234 (5%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
++ + P+ L+ G C DG++++AR + M + E +V YN+++D
Sbjct: 116 SKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGY------- 168
Query: 98 DPFLLH--SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
FL+ ++A+++ + RG+ NV ++ V+I LCK + ++A LF M P
Sbjct: 169 --FLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVP 226
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
+ + LI L ++ R+ + + I M G A++ Y L LC +V+ A+
Sbjct: 227 DTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANI--ITYNSLLDGLCKNHQVDKAIT 284
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +K G P I TY +L+ L + R+ A ++ + ++G + + Y V
Sbjct: 285 LLTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTV 338
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 25/258 (9%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERM-----VKDL--ARVIF---------PDEA 46
+D +K+ R L +++++ +Y M VK++ A+ +F P+
Sbjct: 135 KDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVR 194
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
++I G C + ++EA L EM+ VAYN+++D +C+ R D +
Sbjct: 195 SYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDVW------ 248
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+ EM RG P N+ T+N L+ LCK + + A+ L ++ G PN T+ +L+
Sbjct: 249 -DFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
L + RL + E+ + + G+ LD + Y + LC ++ AL + + M+ + C
Sbjct: 308 LCKNGRLRDAQEVYQDLLNKGY--QLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCT 365
Query: 227 PGIKTYDLLMSKLGAHNR 244
P TY++ + L +R
Sbjct: 366 PDGVTYEITIRALFESDR 383
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + S KV++ LC A + K++ ++ + PD + LI G C ++ +
Sbjct: 188 GMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIYDV 247
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------- 104
GEM+ G ++ YN++LD +C+ + L +
Sbjct: 248 WDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILVDG 307
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A++V ++ +G + + V+I LCK ++AL L +M + C P+
Sbjct: 308 LCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCTPD 367
Query: 157 ETTFVVLIRSLYQAARLE 174
T+ + IR+L+++ R E
Sbjct: 368 GVTYEITIRALFESDRNE 385
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 92/230 (40%), Gaps = 44/230 (19%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
+KG C++G++ +A + GF L + E++LV
Sbjct: 1 MKGLCLNGEVRKALYFHDHVIAKGFHL-------------------------NHIERLLV 35
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL---- 167
+ D V +N +I LCK + D L+ M + YP+ T+ LI SL
Sbjct: 36 KPD-------VVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIYPDVVTYNTLIYSLLNFV 88
Query: 168 YQAARLEEGDEMIDRMKSA-GFGASLDKKAYY----QFLTI---LCGIERVEHALKVFAM 219
Y R E G ++ +MK A G + K F T+ LC V+ A V A+
Sbjct: 89 YIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAI 148
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M EP I TY+ LM V+KA LF+ RG+ + Y V
Sbjct: 149 MIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKV 198
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 51/294 (17%)
Query: 19 EKLCSKGF-ASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE 77
+ + +KGF ++ ER++ + PD M + +I C D + + L EM
Sbjct: 18 DHVIAKGFHLNHIERLL------VKPDVVMYNTIIDILCKDKLVSDGCDLYSEMIDKKIY 71
Query: 78 LGVVAYN----AMLDCVCELCRQKDPFLL---HSEAEKVLVEMDYRGVPRNVETFNVLIT 130
VV YN ++L+ V R++ F + EA +L +M + V N+ TF L+
Sbjct: 72 PDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVTPNIRTFTTLVD 131
Query: 131 NLCK-----------------------------------IRKTEDALKLFHRMGEWGCYP 155
LCK +++ A +LF+ + G P
Sbjct: 132 GLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTISLRGMTP 191
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
N ++ V+I L + ++E + M S D AY + LC R+
Sbjct: 192 NVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVP--DTVAYNSLIDGLCKSRRIYDVWD 249
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M G I TY+ L+ L +++VDKA L + +++G+ Y +
Sbjct: 250 FIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTI 303
>Medtr1g052810.1 | PPR containing protein, putative | HC |
chr1:21845899-21845696 | 20130731
Length = 67
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 1 MERD-YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDG 59
ME D YGL DR +KVVVEKLC KG+ASYAE+M K+LA+ PDE +CD+LI G+C+DG
Sbjct: 1 MENDIYGLNWDRSLVKVVVEKLCLKGYASYAEKMTKNLAKEFLPDEEICDLLIAGYCIDG 60
Query: 60 KLEEAR 65
K++EAR
Sbjct: 61 KIDEAR 66
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 8/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ D ++ CSKG + + ++ R + P+ L+ C K +EA
Sbjct: 229 GLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEA 288
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M VVAY + D + + R D A KVL M RG N T
Sbjct: 289 AQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASD-------AIKVLDLMVKRGEEPNNVT 341
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I LCK + +DAL + M + G P+ T+ L++ L +++E ++++ +
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLM 401
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S F D A+ + LC R+ HA +V+ M G I TY++L+ + +
Sbjct: 402 SKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGK 461
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
+ KA L+ +A G++ Y V
Sbjct: 462 LTKALELWKDAVDSGISPNAATYTV 486
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 12/223 (5%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ LC +G A +++ +A+ PD L+KG C GK++EA L +
Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404
Query: 76 FEL--GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
F + V A+N ++ ELC+Q+ L H A++V M RG P N+ T+N+LI
Sbjct: 405 FHIKPDVFAFNLVIQ---ELCKQRR--LRH--AKRVYYTMVERGFPSNIVTYNILIDGYL 457
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
K AL+L+ + G PN T+ VLI L + L + ++ +++G ++
Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVS 517
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ Y + LC VE A +F M+ +P + ++++++
Sbjct: 518 E--YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIII 558
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + + ++++ C G + A + + R + PD + +I G C +L EA
Sbjct: 124 GFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEA 183
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L EM G + V ++A++D C+ ++ F L E EK+ +E D V
Sbjct: 184 KELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD-------VFV 236
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI+ C E +LF+ M PN T+ L+ +L + + +E +M+D M
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM- 295
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D AY L R A+KV +M G EP TY+ +++ L R
Sbjct: 296 -TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354
Query: 245 VDKANALFHEAQSRG 259
VD A + +G
Sbjct: 355 VDDALGILETMAKKG 369
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+FP LI+ + K A + G + + GF L V +N +L C+ D
Sbjct: 90 VFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLK---GFCQSGDS- 145
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+A + M + + ++N +I LCK ++ +A +LF M C PN TF
Sbjct: 146 ---HKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTF 202
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI + +EEG +++ M+ G D Y ++ C +E ++F M
Sbjct: 203 SALIDGFCKNGDVEEGFGLLEEMEKMGLEG--DVFVYSALISGFCSKGDIERGKELFNEM 260
Query: 221 KADGCEPGIKTYDLLMSKL 239
P + TY LM+ L
Sbjct: 261 LRKNVTPNVVTYSCLMNAL 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ + + V++ LC S A+ + K A P + + L+ C + +E
Sbjct: 474 DSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVE 533
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+AR L EM + VV++N ++D + D + S E +L ++ VP N+
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTL---KAGD---VESAKELLLEMLNMNLVPDNI 587
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TF++LI K+ + ++A L+ RM G P+ F L++ + E+ M+ +
Sbjct: 588 -TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQ 646
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLM 236
M A LD K L LC + + +E L F+ + G IK +LLM
Sbjct: 647 M--ADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGAS--IKCNELLM 699
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDG 59
M +++ +K D + +V+++LC + +A+R+ + FP + ++LI G+ G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
KL +A L + G Y +++ +C++ + S A+ + + G
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKM-------QMLSIAKGLFNKKRASGTR 513
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
V +N L+ +LC+ E A LF M P+ +F ++I +A +E
Sbjct: 514 PTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA 570
>Medtr6g080040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30062096-30061545 | 20130731
Length = 183
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 92/183 (50%), Gaps = 10/183 (5%)
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
VVAYN+++D C+ + S A K++ EM RG P N+ T+N ++ LCK +
Sbjct: 10 VVAYNSLIDGFCKSGKI-------SYALKLVDEMHDRGQPPNIITYNSILDALCKRHHLD 62
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A+ L ++ + G PN T+ +LI L + RLE+ ++ + + G+ +LD AY
Sbjct: 63 KAITLLSKLKDQGIQPNIYTYTILIGGLCKGGRLEDARKVFEVILVKGY--NLDVYAYAV 120
Query: 200 FLTILCGIERVEHALKVFAMMKAD-GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ C + AL + + M D C P T ++++ L N +DKA L HE R
Sbjct: 121 MIHGFCNNGLFDEALAMLSKMTTDNNCNPNAATNEIIICSLFDKNEIDKAKRLLHEMIVR 180
Query: 259 GLA 261
GL
Sbjct: 181 GLV 183
>Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29072402-29074378 | 20130731
Length = 362
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 48/261 (18%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD ++L+ G+C DGK++E + + M + G + VV Y +++D C L +Q +
Sbjct: 108 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC-LVKQVN-- 164
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+A + M GV + +++N++I CKI+K ++A+ LF +M PN T+
Sbjct: 165 ----KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTY 220
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGF-------------------------------- 188
LI L ++ ++ +++D M G
Sbjct: 221 TSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD 280
Query: 189 ---------GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
G +LD AY + C AL + + M+ +G P KTY++++ L
Sbjct: 281 QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSL 340
Query: 240 GAHNRVDKANALFHEAQSRGL 260
+ D A L E +RGL
Sbjct: 341 FKKDENDMAEKLLREMIARGL 361
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 20 KLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
KL ++ F Y+E + + ++ PD LI G+ + GKL++A L +M +
Sbjct: 56 KLVNEAFDLYSEMVSEGIS----PDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPD 111
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
V +N ++D C+ + K E + V M +G+ NV T+ L+ C +++
Sbjct: 112 VYTFNILVDGFCKDGKMK-------EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 164
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A +F+ M + G P+ ++ ++I + +++E + +M ++ Y
Sbjct: 165 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV--VTYTS 222
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC ++ +ALK+ M G P I TY ++ L +++VDKA AL + + +
Sbjct: 223 LIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 44 DEAMCDMLIKGWCVDGK----LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
D+ LI G C G+ L+ RR+ G++ + VV YN ++D +C++ +
Sbjct: 6 DQVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN----VVMYNTIIDSMCKVKLVNEA 61
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
F L+SE M G+ +V T++ LI+ + K +DA+ LF++M P+ T
Sbjct: 62 FDLYSE-------MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYT 114
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
F +L+ + +++EG + M G ++ Y + C +++V A +F
Sbjct: 115 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNV--VTYCSLMDGYCLVKQVNKANSIFNT 172
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M G P ++Y+++++ +VD+A LF + + +
Sbjct: 173 MAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 213
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
GF L V+Y +++ +C++ + + A ++L +D + V NV +N +I ++CK
Sbjct: 2 GFHLDQVSYGTLINGLCKVGQAR-------AALQLLRRVDGKLVQPNVVMYNTIIDSMCK 54
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
++ +A L+ M G P+ T+ LI + +L++ ++ ++M K
Sbjct: 55 VKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENI-----K 109
Query: 195 KAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
Y F ++ C +++ VFAMM G +P + TY LM +V+KAN++
Sbjct: 110 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSI 169
Query: 252 FHEAQSRGLAVTPKEYAV 269
F+ G+ + Y +
Sbjct: 170 FNTMAQGGVNPDTQSYNI 187
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 9/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
+ Y K S+ +++ L + AE + + L P+ +L+ GWC L
Sbjct: 143 KKYKFKVGVHSVNFLLDSLGATKLVKEAEVVYEKLRDRFVPNLQTYTILLNGWCRVRNLL 202
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA R+ EM GF +VA+N ML+ + C++K S+ K+ M +G NV
Sbjct: 203 EAGRVWNEMIDKGFNPDIVAHNIMLEGLLR-CQKK------SDGIKLFEVMKAKGPLPNV 255
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++ +LI +LCK +A++ F+ M + GC + + LI + +++ +++
Sbjct: 256 RSYTILIQDLCKQMMMREAVEYFNEMVDRGCRSDVALYTCLITGFGRQKKMDVVYDLLKE 315
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M+ G D + Y + ++ + A++V+ M G EP I TY ++M
Sbjct: 316 MRER--GCPPDGRTYNALIKLMTSQHMPDDAVRVYKKMIQSGVEPTIHTYTMIMKSYFVT 373
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +++ E + +G Y V
Sbjct: 374 KNYEMGRSVWDEMRHKGCCPDDNSYTV 400
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
A+ P+ +LI+ C + EA EM G V Y + + RQK
Sbjct: 248 AKGPLPNVRSYTILIQDLCKQMMMREAVEYFNEMVDRGCRSDVALYTCL---ITGFGRQK 304
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
+++ +L EM RG P + T+N LI + +DA++++ +M + G P
Sbjct: 305 KMDVVYD----LLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRVYKKMIQSGVEPTI 360
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
T+ ++++S + E G + D M+ G D +Y F+ L R + A K
Sbjct: 361 HTYTMIMKSYFVTKNYEMGRSVWDEMRHK--GCCPDDNSYTVFIGGLIRQGRPDEACKYI 418
Query: 218 AMMKADGCEPGIKTYDLLMSKLGA 241
M + G+K L +K GA
Sbjct: 419 DEM----MQKGMKAPQLDYNKFGA 438
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 48/259 (18%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++L+ G+C DGK++E + + M + G + VV Y +++D C L +Q +
Sbjct: 246 PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC-LVKQVN---- 300
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A + M GV + +++N++I CKI+K ++A+ LF +M PN T+
Sbjct: 301 --KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTS 358
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGF---------------------------------- 188
LI L ++ ++ +++D M G
Sbjct: 359 LIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQV 418
Query: 189 -------GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
G +LD AY + C AL + + M+ +G P KTY++++ L
Sbjct: 419 FEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFK 478
Query: 242 HNRVDKANALFHEAQSRGL 260
+ D A L E +RGL
Sbjct: 479 KDENDMAEKLLREMIARGL 497
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 112/239 (46%), Gaps = 13/239 (5%)
Query: 20 KLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
KL ++ F Y+E + + ++ PD LI G+ + GKL++A L +M +
Sbjct: 192 KLVNEAFDLYSEMVSEGIS----PDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPD 247
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
V +N ++D C+ + K E + V M +G+ NV T+ L+ C +++
Sbjct: 248 VYTFNILVDGFCKDGKMK-------EGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 300
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A +F+ M + G P+ ++ ++I + +++E + +M ++ Y
Sbjct: 301 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNV--VTYTS 358
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC ++ +ALK+ M G P I TY ++ L +++VDKA AL + + +
Sbjct: 359 LIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 417
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 17/214 (7%)
Query: 51 LIKGWCVDGK----LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
LI G C G+ L+ RR+ G++ + VV YN ++D +C++ + F L+SE
Sbjct: 149 LINGLCKVGQARAALQLLRRVDGKLVQPN----VVMYNTIIDSMCKVKLVNEAFDLYSE- 203
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
M G+ +V T++ LI+ + K +DA+ LF++M P+ TF +L+
Sbjct: 204 ------MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDG 257
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+ +++EG + M G ++ Y + C +++V A +F M G
Sbjct: 258 FCKDGKMKEGKTVFAMMMKQGIKPNV--VTYCSLMDGYCLVKQVNKANSIFNTMAQGGVN 315
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P ++Y+++++ +VD+A LF + + +
Sbjct: 316 PDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349
>Medtr1g035250.1 | PPR containing plant-like protein | HC |
chr1:12584008-12586490 | 20130731
Length = 662
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 15/232 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ + + V+++ LC G A +++ +++ + PD+ +I C G +++A
Sbjct: 174 GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA 233
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R LA + FE V YNA++ VC+ CR K+ F L +E M RGV NV +
Sbjct: 234 RELAMK-----FEPVVPVYNALIHGVCKECRFKEAFDLMNE-------MVDRGVDPNVIS 281
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I+ L + E +L +F RM GC PN TF LI+ + R+ + + + M
Sbjct: 282 YSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMI 341
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
G S + AY + LC ++ A+ V+ M+ D P + TY ++
Sbjct: 342 RE--GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTII 391
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ LIKG+ V G++ +A L M R G VVAYN ++ +C
Sbjct: 312 PNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM------ 365
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA V +M+ + NV T++ +I K A + +++M GC PN +
Sbjct: 366 -DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTC 424
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
++ L Q + ++ ++ID M S G ++ + F+ LC RVE A+ V M+
Sbjct: 425 MVDVLCQMSMFDQAFDLIDNMISDGCPPTV--ITFNNFIKGLCRAGRVEWAMNVLDQMEK 482
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
C P I+TY+ L+ L N +A L E + R
Sbjct: 483 YECLPNIRTYNELLDGLFRANAFREACGLIRELEER 518
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 14/179 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKG----FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G+ + + ++ LCS G S +M KD R P+ +I G+ G L
Sbjct: 344 GVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIR---PNVTTYSTIIYGFAKSGDL 400
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
A +M G VV Y M+D +C++ + +A ++ M G P
Sbjct: 401 VSACETWNKMINCGCRPNVVVYTCMVDVLCQMS-------MFDQAFDLIDNMISDGCPPT 453
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
V TFN I LC+ + E A+ + +M ++ C PN T+ L+ L++A E +I
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLI 512
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 90/230 (39%), Gaps = 49/230 (21%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G E V YN +LD L Q L + M G+ NV T+NVL+ LC+
Sbjct: 139 GCEPSVKIYNLVLD---ALLSQN----LFKMINALYNNMKSEGLEPNVFTYNVLLKALCQ 191
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL----------------------YQA-- 170
K + A KL M GC P++ ++ +I S+ Y A
Sbjct: 192 NGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALI 251
Query: 171 ------ARLEEG----DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
R +E +EM+DR G + +Y ++ L + VE +L VF M
Sbjct: 252 HGVCKECRFKEAFDLMNEMVDR------GVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
GC P ++T+ L+ RV A L++ G V+P A +
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREG--VSPNVVAYN 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+L +M VP + E F +I + E LK+F+R+ E+GC P+ + +++ +L
Sbjct: 96 LLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALL 155
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + + + MKS G ++ Y L LC +V+ A K+ M GC+P
Sbjct: 156 SQNLFKMINALYNNMKSEGLEPNV--FTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPD 213
Query: 229 IKTYDLLMSKLGAHNRVDKANAL 251
+Y ++S + VDKA L
Sbjct: 214 DVSYTTVISSMCKLGDVDKAREL 236
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ ++ G+ +G ++ +L G+M G +L + N ++ C+L + K + +
Sbjct: 528 NTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKV---LDN 584
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ E ++R ++ T +++ +C TE+A+ H M + G +PN T+ VL+R +
Sbjct: 585 ISAEKEFRA---DIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF 641
Query: 169 Q 169
Sbjct: 642 S 642
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 111/233 (47%), Gaps = 9/233 (3%)
Query: 35 KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELC 94
K + R++FP+ ++I G+ + +L+ A L +M R + ++ YN ++D +C+
Sbjct: 405 KTVKRMVFPNITSFSIVIDGFLKNDQLDLALSLFNDMRRFVDKPTILIYNNLIDSLCKSN 464
Query: 95 RQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
R + + ++L EM G+ T+N + LCK + A + MG G
Sbjct: 465 RLEKSY-------ELLREMKELGIEPTHFTYNSIYGCLCKRKDVSAACVMLKEMGSCGHG 517
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL 214
P +L++ L R+ E E +D M GF D +Y + L I+ V+HA+
Sbjct: 518 PWIKHTTLLVKELCDHGRVIEACEFLDNMTQQGFLP--DIVSYSAAIGGLVNIQEVDHAM 575
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
K+F + + G P + +++L+ L NR +A LFHE RGL+ + Y
Sbjct: 576 KIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTY 628
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 8/172 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D S + L + +A ++ KDL + PD ++LI+G C + EA
Sbjct: 550 GFLPDIVSYSAAIGGLVNIQEVDHAMKIFKDLWSHGHCPDVVCFNVLIRGLCKVNRFTEA 609
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L E+ + G VV YN +DC C+ D + H L M +V T
Sbjct: 610 EDLFHELVKRGLSPSVVTYNLFIDCWCK-NGNVDKAMAH------LFRMTKEDKVPSVVT 662
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
+ L+ CK + +DA+ LF M + GC PN+ TF+ LI L + R E
Sbjct: 663 YTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLCKCCRPTEA 714
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 8/185 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEE 63
+G D V++ LC + AE + +L R + P ++ I WC +G +++
Sbjct: 584 HGHCPDVVCFNVLIRGLCKVNRFTEAEDLFHELVKRGLSPSVVTYNLFIDCWCKNGNVDK 643
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A M + VV Y ++D C+ R D LL E EK G P N
Sbjct: 644 AMAHLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEK-------NGCPPNQI 696
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TF LI LCK + +AL M + P+ +V L+ + L E+ M
Sbjct: 697 TFMALIYGLCKCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREM 756
Query: 184 KSAGF 188
GF
Sbjct: 757 VDLGF 761
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 123/269 (45%), Gaps = 12/269 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
++ G+ S +++ L F A + +D+ P+ ++L+ ++
Sbjct: 788 KNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRI 847
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ L EM G E + +N ++ + + L+ E L+ D+ P
Sbjct: 848 NKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYE----LMSGDFSPTPC- 902
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+ LI L K ++E A+K+F M ++GC PN + +LI ++ ++ E+
Sbjct: 903 --TYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFK 960
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
+M G D K+Y + LC R++ A++ F +K G +P +Y+ +++ LG
Sbjct: 961 KMVKEGIRP--DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGK 1018
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAVD 270
R+D+A +LF E ++RG ++P Y +
Sbjct: 1019 SRRLDEALSLFSEMKNRG--ISPDLYTYN 1045
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I P A C+ + G++ EA + ++++ G V YN ++ C + Q D
Sbjct: 474 RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSK-AGQID 532
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
+A ++L EM +G +V N LI L K + + A K+F R+ P
Sbjct: 533 ------KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVV 586
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ +L+ L + ++ + E+ M +G + + L L + V+ ALK+F
Sbjct: 587 TYNILLTGLGKEGKILKALELFGSMTESG--CPPNTITFNSLLDCLSKNDAVDLALKMFC 644
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
M C P + TY+ ++ L R+D A FH+ +
Sbjct: 645 RMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 45/302 (14%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G D + V+++ LC+ G A+ + VK A PD L+ + G LE
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+R EM G+ VV Y +++ LC+ D A +L M +G+ N+
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEA---LCKSGDV----DRAFDMLDVMTTKGIFPNL 410
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI------------------ 164
T+N +I L K R+ ++AL+L M G P ++V+ I
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470
Query: 165 --------------RSLYQAA---RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
SLY A R+ E +++ + + G S D Y +
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGL--SPDSVTYNMLMKCYSKA 528
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+++ A ++ + M + GCEP + + L++ L RVD A +F ++ LA T Y
Sbjct: 529 GQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTY 588
Query: 268 AV 269
+
Sbjct: 589 NI 590
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +++I L +A L E+ G F Y ++D + + R +
Sbjct: 864 PNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSE----- 918
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A K+ EM G N +N+LI K + + A +LF +M + G P+ ++ +
Sbjct: 919 --QAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L R++E + + +K G D +Y + L R++ AL +F+ MK
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDP--DTVSYNFIINGLGKSRRLDEALSLFSEMKN 1034
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P + TY+ L+ LG +VD A ++ E Q GL
Sbjct: 1035 RGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGL 1072
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 113/238 (47%), Gaps = 16/238 (6%)
Query: 25 GFASYAERMVKDLARVI--FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
G A +A R + ++ ++ + + +L+ G+C EA ++ M G + +
Sbjct: 183 GRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFC-----NEALKVYKRMISEGMKPSMKT 237
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
Y+A++ L R+ D + +L EM G+ N+ T+ + I L + R+ +DA
Sbjct: 238 YSALM---VALGRRGDT----RKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAW 290
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
+F M + GC P+ T+ VLI +L A +L++ E+ +M+++ S D+ Y +
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRAS--SHSPDRVTYITLMD 348
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ +E + + M+ DG P + TY +L+ L VD+A + ++G+
Sbjct: 349 KFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGI 406
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 11/260 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDG 59
ME D G D + +++E LC G A M+ + + IFP+ + +I G
Sbjct: 366 MEVD-GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKAR 424
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+L+EA L M G + +Y +D + DP ++A M RG+
Sbjct: 425 RLDEALELLENMESLGVKPTAFSYVLFID---YYGKSGDP----AKAIDTFETMKKRGIM 477
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ N + L + + +A +F+ + + G P+ T+ +L++ +A ++++ ++
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ M S G D + L RV+ A K+F +K P + TY++L++ L
Sbjct: 538 LSEMISKG--CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGL 595
Query: 240 GAHNRVDKANALFHEAQSRG 259
G ++ KA LF G
Sbjct: 596 GKEGKILKALELFGSMTESG 615
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 116/264 (43%), Gaps = 17/264 (6%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAG 69
D + ++ L +G YA + + + PD LI G G++E+A ++
Sbjct: 654 DVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVM 713
Query: 70 E-MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY---RGVPRNVETF 125
E +++ + + +++C+ L +E E+ + + V ++
Sbjct: 714 EFVHQACLQTNSQFWGELMECI----------LTEAEIEEAISFAEILVCNSVCQDDHVM 763
Query: 126 NVLITNLCKIRKTEDALKLFHRMGE-WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
LI LCK +K DA +F + + G +P ++ L+ L + E+ E+ + MK
Sbjct: 764 LPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK 823
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
SAG + Y L +R+ +++ M++ GCEP T+++++S L N
Sbjct: 824 SAG--THPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
++KA L++E S + TP Y
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYG 905
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 33/260 (12%)
Query: 23 SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
+K Y E M D + P LI G G+ E+A ++ EM G V
Sbjct: 883 NKALDLYYELMSGDFS----PTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938
Query: 83 YNAML---------DCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
YN ++ D CEL ++ M G+ +++++ +L+ LC
Sbjct: 939 YNILINGFGKSGEIDFACELFKK----------------MVKEGIRPDLKSYTILVECLC 982
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ ++A++ F + G P+ ++ +I L ++ RL+E + MK+ G L
Sbjct: 983 ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042
Query: 194 KKAYYQFLTILCGIE-RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y L + GI +V+ A+K++ ++ G EP + TY+ L+ D+A ++F
Sbjct: 1043 T---YNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVF 1099
Query: 253 HEAQSRGLAVTPKEYAVDPR 272
+ G + + +A P
Sbjct: 1100 KKMMVVGCSPNTETFAQLPN 1119
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 21/247 (8%)
Query: 28 SYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-GFELGVVAYNAM 86
S+AE +V + D+ + LIK C K +A+ + + + G + +YN +
Sbjct: 746 SFAEILV---CNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCL 802
Query: 87 LDCVCELCRQKDPFLLHS----EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
+D LL S +A ++ +M G N T+N+L+ K ++
Sbjct: 803 MDG-----------LLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLY 851
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
L+ M GC PN T ++I +L ++ L + ++ + S F + Y +
Sbjct: 852 DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPT--PCTYGPLID 909
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
L R E A+K+F M GC P Y++L++ G +D A LF + G+
Sbjct: 910 GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969
Query: 263 TPKEYAV 269
K Y +
Sbjct: 970 DLKSYTI 976
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 8/185 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
DYG + +++ G +A + K + + I PD +L++ C+ G+++
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA + E+ G + V+YN +++ + + R+ D EA + EM RG+ ++
Sbjct: 989 EAVQYFEELKLTGLDPDTVSYNFIINGLGK-SRRLD------EALSLFSEMKNRGISPDL 1041
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI +L K + A+K++ + G P+ T+ LIR + ++ + +
Sbjct: 1042 YTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKK 1101
Query: 183 MKSAG 187
M G
Sbjct: 1102 MMVVG 1106
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 22/166 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G++ D S ++VE LC G A + ++L + PD + +I G +L+EA
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH-------SEAEKVLVEMDYRG 117
L EM G + YNA++ LH A K+ E+ G
Sbjct: 1026 LSLFSEMKNRGISPDLYTYNALI--------------LHLGIAGKVDVAVKMYEELQLVG 1071
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ +V T+N LI + A +F +M GC PN TF L
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P +L+ +C +GK++EA+ + M + + +V YN++++ C +
Sbjct: 275 INPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEV---- 330
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
++AE + M GV +V +++++I+ CKI+ ++A+KLF M +P+ T+
Sbjct: 331 ---NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTY 387
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
LI L ++ R+ ++I M G ++ Y L LC V+ A+++ +
Sbjct: 388 NSLIDGLCKSGRISYALKLIGEMHDRGQPPNI--ITYNSLLDALCKNHHVDKAIELLTKL 445
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
K +P + TY++L++ L R+ A +F + G + Y
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTY 492
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 113/251 (45%), Gaps = 13/251 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + F Y+E +A+ I P + LI G C+ G+L++A L +M
Sbjct: 222 DKLVNDAFDFYSEM----VAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINP 277
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V ++ ++D C+ + K EA+ V V M + V N+ T+N L+ C + +
Sbjct: 278 TVYTFSILVDAFCKEGKVK-------EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEV 330
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
A +F+ M + G P+ ++ ++I + ++E ++ + M D Y
Sbjct: 331 NKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFP--DVVTYN 388
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC R+ +ALK+ M G P I TY+ L+ L ++ VDKA L + +
Sbjct: 389 SLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDH 448
Query: 259 GLAVTPKEYAV 269
+ + Y +
Sbjct: 449 NIQPSVCTYNI 459
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 119/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+ + +L +++ G S + + ++ + + PD LIKG C+ G + +A
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF+L V+Y +++ +C++ + K A ++L +D + V +V
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTK-------AALEMLRRIDGKLVRLDVVM 211
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I +CK + DA + M P T+ LI L +L++ ++ +M
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
++ + + C +V+ A VF +M +P I TY+ LM+ N
Sbjct: 272 LENINPTV--YTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA ++F+ G+A Y++
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSI 354
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + ++ S + ++ LC G A M++ + +++ D M + +I G C D + +A
Sbjct: 169 GFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDA 228
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF-LLHSEAEKVLVEMDYRGVPRNVE 123
EM VV YN ++ +C + + KD LLH +M + V
Sbjct: 229 FDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH--------KMILENINPTVY 280
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
TF++L+ CK K ++A +F M + PN T+ L+ + + + + + M
Sbjct: 281 TFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
A G + D +Y ++ C I+ V+ A+K+F M P + TY+ L+ L
Sbjct: 341 --AQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSG 398
Query: 244 RVDKANALFHEAQSRG 259
R+ A L E RG
Sbjct: 399 RISYALKLIGEMHDRG 414
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 91/177 (51%), Gaps = 10/177 (5%)
Query: 30 AERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
AE + +A++ + PD ++I G+C ++EA +L EM+ VV YN+++D
Sbjct: 333 AESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID 392
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ R S A K++ EM RG P N+ T+N L+ LCK + A++L ++
Sbjct: 393 GLCKSGRI-------SYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
+ P+ T+ +LI L ++ RL++ ++ + + G+ ++D Y + C
Sbjct: 446 KDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGY--NIDVYTYNTMIKGFC 500
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 10/225 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G A+ + V + + + P+ + L+ G+C+ ++ +A + M
Sbjct: 281 TFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ G V +Y+ M+ C++ + D EA K+ EM + + +V T+N LI
Sbjct: 341 AQIGVAPDVHSYSIMISGFCKI-KMVD------EAMKLFEEMHCKQIFPDVVTYNSLIDG 393
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK + ALKL M + G PN T+ L+ +L + +++ E++ ++K S
Sbjct: 394 LCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPS 453
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ Y + LC R++ A KVF + +G + TY+ ++
Sbjct: 454 V--CTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMI 496
>Medtr4g021220.1 | PPR containing plant-like protein | HC |
chr4:6857254-6858736 | 20130731
Length = 449
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 9/258 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
D+ +K D VV++ +C +G E+++KD++ I PD +I+G C G+LE
Sbjct: 133 DFEMKPDTVMYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLE 192
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EA + M G V +A+LD +C L + L E EK NV
Sbjct: 193 EAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEK------SGDCCPNV 246
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+ LI + CK + +AL + RM +GC+ N T LI SL R++E +++D+
Sbjct: 247 VTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDEAYKVVDK 306
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ + D Y + ++++E A +F M A +P LL+ +L
Sbjct: 307 LVVEHCVSRGD--CYNSLVISFIRVKKLEGAENLFKEMLAAEIKPDTLASSLLLKELCLK 364
Query: 243 NRVDKANALFHEAQSRGL 260
+RV L ++ G
Sbjct: 365 DRVLDGFYLLDTIENMGF 382
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 97/241 (40%), Gaps = 28/241 (11%)
Query: 27 ASYAERMVKDLARVIFPDEAMCDMLIKGWCVDG------KLEEARRLAGEMYRGGFELGV 80
+ Y R V +L + E +CD +IK + VDG E +L E L V
Sbjct: 69 SGYMYRKVCNLFEIDKNPEIICD-VIKAYEVDGCVVNVNMFREVLKLCKEAENVDLGLWV 127
Query: 81 -------------VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNV 127
V YN ++ VC +Q D + EK++ +M G+ ++ T+
Sbjct: 128 LRKMEDFEMKPDTVMYNVVIKLVC---KQGDVEM----GEKLMKDMSLNGICPDLITYMT 180
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+I LC + E+A ++ M GC PN ++ L + +E E++D M+ +G
Sbjct: 181 MIEGLCSAGRLEEAYEMVKVMRGNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSG 240
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
+ Y + C AL + M+A GC T L+ L RVD+
Sbjct: 241 -DCCPNVVTYTSLIQSFCKRGEWTEALNILDRMRAFGCFANHVTVFTLIESLCTEGRVDE 299
Query: 248 A 248
A
Sbjct: 300 A 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 25/243 (10%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+ +E SK + V + FP ++ + W + R +G MYR
Sbjct: 20 ITIENALSKTKPKLDSQCVIQVLNKCFPKQSQLGVRFFIW---AGFQSGYRHSGYMYRKV 76
Query: 76 FELGVVAYNAML-----------DCVCELCRQKDPFLLHSEAEKVLVEM-------DYRG 117
L + N + CV + ++ L EAE V + + D+
Sbjct: 77 CNLFEIDKNPEIICDVIKAYEVDGCVVNVNMFREVLKLCKEAENVDLGLWVLRKMEDFEM 136
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
P V +NV+I +CK E KL M G P+ T++ +I L A RLEE
Sbjct: 137 KPDTV-MYNVVIKLVCKQGDVEMGEKLMKDMSLNGICPDLITYMTMIEGLCSAGRLEEAY 195
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTYDLLM 236
EM+ M+ G G S + L LC ++ +E AL++ M+ G C P + TY L+
Sbjct: 196 EMVKVMR--GNGCSPNSVVLSAVLDGLCRLDSMERALELLDEMEKSGDCCPNVVTYTSLI 253
Query: 237 SKL 239
Sbjct: 254 QSF 256
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 15 KVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+V++ LC GF ++ + P+E LI+G C GK E L EM R
Sbjct: 194 SIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR 253
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G ++ V + ++D +C K+ L+ EA ++ EM RG N+ T L+ C
Sbjct: 254 RGLDVSVYVFTVLIDGLC-----KNGMLV--EAREMFDEMVNRGYEPNIVTCTALMGGYC 306
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ A +LF +GEWG + T+ V I + R+ + + D M G ++
Sbjct: 307 LKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI- 365
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y + LC V A ++ M G P I T +L+ L R+D+A LF+
Sbjct: 366 -VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFN 424
Query: 254 EAQSRGLAVTPKEYAV 269
+ GL Y +
Sbjct: 425 QLVESGLTPDVWSYTI 440
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 22 CSKGFASYAERMVKDLARVIFP---------DEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
C+ Y + D+AR +F D ++ I G+C G++ +A R+ EM
Sbjct: 298 CTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMC 357
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
R G +V YN+++DC+C+ S A +++ M G+ ++ T +L+ L
Sbjct: 358 REGVVPNIVTYNSLIDCLCKAGEV-------SGAWEIVKTMHRSGLTPDIVTCCILLDGL 410
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
CK ++ + A+ LF+++ E G P+ ++ +LI + R+ E ++ M +
Sbjct: 411 CKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHI 470
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y + LC R+ +A ++ M G P TY +L+ L +D+A LF
Sbjct: 471 --VTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLF 528
Query: 253 HEAQSRGL 260
++ RGL
Sbjct: 529 NQMIKRGL 536
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 10/267 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
++G KRD + V + C G A R+ ++ R + P+ + LI C G++
Sbjct: 323 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 382
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A + M+R G +V +LD +C+ R LL ++ LVE G+ +V
Sbjct: 383 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ----LVE---SGLTPDV 435
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
++ +LI C R+ +A+ L M P+ T+ LI L ++ R+ +++
Sbjct: 436 WSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNE 495
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G D Y L L + ++ A+ +F M G EP + Y +++
Sbjct: 496 MHVKG--PLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 553
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
R+D+A LF E + L Y +
Sbjct: 554 ERIDEAINLFREMHMKNLVPDIVTYTI 580
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 104/224 (46%), Gaps = 10/224 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC G S A +VK + R + PD C +L+ G C +L++A L ++ G
Sbjct: 371 LIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 430
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
V +Y ++ C R EA +L +M + + ++ T++ LI LC+
Sbjct: 431 LTPDVWSYTILIHGCCTSRRM-------GEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 483
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ +A +L + M G P+ T+ +L+ +L++ L+E + ++M G D
Sbjct: 484 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP--DVM 541
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
Y + C ER++ A+ +F M P I TY +L + +
Sbjct: 542 CYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAV 585
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF-LL 102
D + ++KG CV+G + +A E+ GF L V+Y +++ +CE R + LL
Sbjct: 111 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 170
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
++ E D V NV ++++I LC+ ++ + ++ M G PNE T+
Sbjct: 171 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 230
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LIR L + EG ++D M G S+ + + LC + A ++F M
Sbjct: 231 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSV--YVFTVLIDGLCKNGMLVEAREMFDEMVN 288
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G EP I T LM VD A LF G Y V
Sbjct: 289 RGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 119/301 (39%), Gaps = 43/301 (14%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDG 59
++R YGL D +L V++ LC G A ++ F +E +LI G C +G
Sbjct: 104 LKRGYGL--DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENG 161
Query: 60 KLEEARRL-------AGEMYRGGFELG-VVAYNAMLDCVCELCRQKDPFLLHSE------ 105
++ EA L + G F G VV Y+ ++DC+C + F ++E
Sbjct: 162 RVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGV 221
Query: 106 ----------------------AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
++ EM RG+ +V F VLI LCK +A +
Sbjct: 222 CPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEARE 281
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
+F M G PN T L+ ++ E+ D + GF D Y F+
Sbjct: 282 MFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGF--KRDVWTYNVFIHG 339
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
C + RV A++VF M +G P I TY+ L+ L V A + GL T
Sbjct: 340 YCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGL--T 397
Query: 264 P 264
P
Sbjct: 398 P 398
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D S +++ C+ A +++D+ + + P LI G C G++ A
Sbjct: 430 GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNA 489
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL EM+ G + Y+ +LD + K L EA + +M RG+ +V
Sbjct: 490 WRLLNEMHVKGPLPDTITYSILLDAL-----WKKQHL--DEAVFLFNQMIKRGLEPDVMC 542
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+ ++I CK + ++A+ LF M P+ T+ +L +++++
Sbjct: 543 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSG 589
>Medtr7g405940.1 | PPR containing plant-like protein | HC |
chr7:313415-311451 | 20130731
Length = 654
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 15/269 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
D GL+ + + ++E LC +G A M++++ + P+ LI G C G E
Sbjct: 226 DMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTE 285
Query: 63 EARRLAGEMYRG-GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A RL ++ R + V+ Y AM+ C ++D + AE +L M +G+ N
Sbjct: 286 KAFRLFLKLVRSENHKPNVLTYTAMISGYC----REDKL---NRAEMLLSRMKEQGLVPN 338
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+ LI CK E A L + M G PN T+ ++ L + R++E +M++
Sbjct: 339 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNVCTYNAIVNGLCKRGRVQEAYKMLE 398
Query: 182 RMKSAGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
GF L D+ Y ++ C + AL +F M G +P I +Y L++
Sbjct: 399 D----GFQNGLKPDRFTYNILMSEHCKQANIRQALVLFNKMVKSGIQPDIHSYTTLIAVF 454
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYA 268
NR+ ++ F EA G+ T + Y
Sbjct: 455 CRENRMKESEMFFEEAVRIGIIPTNRTYT 483
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 119/270 (44%), Gaps = 19/270 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G D + +++ + C KG+A+ A + L + + P+ +I+G C G +++A
Sbjct: 193 GFVVDNATFTLIISRFCEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQA 252
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF-----LLHSEAEKVLVEMDYRGVP 119
+ EM G++ V + +++D +C+ + F L+ SE K
Sbjct: 253 FEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHK----------- 301
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
NV T+ +I+ C+ K A L RM E G PN T+ LI +A E ++
Sbjct: 302 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 361
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
++ M S GF ++ Y + LC RV+ A K+ +G +P TY++LMS+
Sbjct: 362 MNLMSSEGFSPNV--CTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEH 419
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +A LF++ G+ Y
Sbjct: 420 CKQANIRQALVLFNKMVKSGIQPDIHSYTT 449
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 37/270 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + + +V LC +G A +M++D + PD ++L+ C + +A
Sbjct: 369 GFSPNVCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDRFTYNILMSEHCKQANIRQA 428
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L +M + G + + +Y ++ C R K+ + EA ++ + +P N T
Sbjct: 429 LVLFNKMVKSGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGI------IPTN-RT 481
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I C+ A+K FHR+ + GC P+ T+ +I L + ++L+E + D M
Sbjct: 482 YTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKLDEARGLYDSMI 541
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG------------IKTY 232
G + C + R+ A + K D C I+T
Sbjct: 542 EKGL--------------VPCEVTRITLA---YEYCKVDDCLSAMVILERLEKKLWIRTA 584
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
L+ KL + +V A F++ L V
Sbjct: 585 TTLVRKLCSEKKVGMAALFFNKLLDMDLHV 614
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 114/258 (44%), Gaps = 11/258 (4%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
++ +VE G A MV ++ + + P+ +++IK G +E A L EM
Sbjct: 96 MRCMVENFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNLIIKVTSEMGLVEYAELLFEEMC 155
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
G + V+Y M+ C++ EA++ L M RG + TF ++I+
Sbjct: 156 VRGVQPDSVSYRVMVVMYCKIGNIL-------EADRWLSAMLERGFVVDNATFTLIISRF 208
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
C+ AL F R+ + G PN F +I L + +++ EM++ M G+ ++
Sbjct: 209 CEKGYATRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNV 268
Query: 193 DKKAYYQFLTILCGIERVEHALKVF-AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ + LC E A ++F +++++ +P + TY ++S +++++A L
Sbjct: 269 --YTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 326
Query: 252 FHEAQSRGLAVTPKEYAV 269
+ +GL Y
Sbjct: 327 LSRMKEQGLVPNTNTYTT 344
>Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29945975-29946805 | 20130731
Length = 262
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 104/231 (45%), Gaps = 4/231 (1%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
+++ PD M ++I G C D + + L EM +V YN ++ C + + D
Sbjct: 14 KLVQPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHGFCIVGQLND 73
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
F L + M +GV + +++ ++I CKI+ ++A+ LF M +PN
Sbjct: 74 AFGLLQLF--IFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVV 131
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ LI L ++ R+ E++D M G ++ Y L +LC V+ A+
Sbjct: 132 TYNSLINGLCRSGRISYALELVDEMHDRGQPPNI--ITYNSILDVLCKNYDVDKAIVFLT 189
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+K +P + TY++L+ L R+ A +F +G ++ Y +
Sbjct: 190 KLKDQDIQPSMYTYNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTI 240
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C A + +++ + IFP+ + LI G C G++ A
Sbjct: 90 GVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCKQIFPNVVTYNSLINGLCRSGRISYA 149
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM+ G ++ YN++LD LC+ D +A L ++ + + ++ T
Sbjct: 150 LELVDEMHDRGQPPNIITYNSILDV---LCKNYDV----DKAIVFLTKLKDQDIQPSMYT 202
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI LCK+ + +DA K+F + GC + T+ ++I E ++ +MK
Sbjct: 203 YNILIYGLCKVGRLKDARKVFEYLLVKGCSLDAYTYTIMIHGFCSKGLFGEAFTLLSKMK 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 14/178 (7%)
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+++L +D + V +V ++V+I +CK + D + L+ M PN T+ LI
Sbjct: 5 QQLLRRVDRKLVQPDVVMYSVIIDGMCKDKLVNDVVDLYSEMVTKRISPNIVTYNTLIHG 64
Query: 167 LYQAARLEEGDEMIDRM---KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+L + ++ A G + D +Y + C I+ V+ A+ +F M
Sbjct: 65 FCIVGQLNDAFGLLQLFIFGIMARKGVTPDTDSYIIMINGFCKIKMVDEAMNLFEEMHCK 124
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG-----------LAVTPKEYAVD 270
P + TY+ L++ L R+ A L E RG L V K Y VD
Sbjct: 125 QIFPNVVTYNSLINGLCRSGRISYALELVDEMHDRGQPPNIITYNSILDVLCKNYDVD 182
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++ GWC +Y G + V YN ++D C L + +
Sbjct: 60 PECCFASLVSSGWCF-------------LYLG---MVXVTYNTLMDGYC-LANEVN---- 98
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A+ V + R + V ++ ++I LCKI+ ++AL LF M C PN T+
Sbjct: 99 --KAKNVFNVIGKRRMTPYVFSYIIIINGLCKIKMVDEALNLFTEMH---CKPNTVTYNS 153
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L ++ R+ E++D+M G A D Y FL LC +V+ A+ + +K
Sbjct: 154 LIDGLCKSGRISHAWELLDQMHDRGQPA--DVITYNSFLHALCKNHQVDKAIALVKKIKD 211
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P I TY +L+ L R++ A +F + +G VT Y +
Sbjct: 212 QGIQPNINTYSILIDGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTI 258
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I G C ++EA L EM+ + V YN+++D +C+ R S A ++
Sbjct: 121 IIINGLCKIKMVDEALNLFTEMH---CKPNTVTYNSLIDGLCKSGRI-------SHAWEL 170
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
L +M RG P +V T+N + LCK + + A+ L ++ + G PN T+ +LI L +
Sbjct: 171 LDQMHDRGQPADVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILIDGLCK 230
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
RLE + + G+ +L Y + LC + A+ + M+ +GC P
Sbjct: 231 EGRLENAQVIFQDLLIKGYKVTL--WTYTIMINGLCLEGLFDEAMTLLEKMEDNGCIPNA 288
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY ++ L ++ DKA L E +RGL
Sbjct: 289 VTYATIIHALFKNDENDKAEKLLREMIARGL 319
>Medtr7g024140.1 | PPR containing plant-like protein, putative | HC
| chr7:7909644-7911925 | 20130731
Length = 457
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY-RGGFELGVVAYNAMLDCVCELCRQKDP 99
I PD ++L+ + GK EEA + +++ RG + +YN M++ +C+ +
Sbjct: 108 IRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNA 167
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
+L + RG V T+N +I LCK R+ DA ++ + ++G PN T
Sbjct: 168 LMLFRNLRR-------RGFVPEVLTYNAMINGLCKARRLADARRVLNEFCDFGFEPNAIT 220
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ +++ ++ RLE+G E++ M+ GF + D AY + L R+E A ++
Sbjct: 221 YTTVMKCCFRCGRLEQGLEILSEMRRKGF--TFDGFAYCTVVAALVKTGRIEEADEIAEK 278
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M ++G P + +Y+ +++ R D+A L E + +G+
Sbjct: 279 MMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGM 319
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 109/240 (45%), Gaps = 31/240 (12%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLAGE 70
S V++ LC G+ + A + ++L R F E + + +I G C +L +ARR+ E
Sbjct: 149 ASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNE 208
Query: 71 MYRGGFELGVVAYNAMLDC-------------VCELCRQKDPF-----------LLHS-- 104
GFE + Y ++ C + E+ R+ F L+ +
Sbjct: 209 FCDFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGR 268
Query: 105 --EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA+++ +M G+ ++ ++N +I C+ + ++AL+L + + G ++ T +
Sbjct: 269 IEEADEIAEKMMSNGLVPDLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTI 328
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I L + E ++ +D M + GFG +L A+ L L ++ A+KVF M+
Sbjct: 329 IIHGLCKDGNFEGAEKHLDYMNTLGFGFNL--VAFNSILDCLGKAGDIDKAVKVFDSMEV 386
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 10/247 (4%)
Query: 15 KVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
V+++++C + A + + LA+ I P+ + L+ G C+ G+L++A L M
Sbjct: 212 NVLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVS 271
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
V +N ++D C+ + KD A+ VL M GV N T++ LI C
Sbjct: 272 ENINPTVYTFNILVDGFCKEGKVKD-------AKVVLAVMMKAGVKLNAVTYSTLIRGFC 324
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ K ++A+ LF++M PN TF +L+ + + ++++ + +++ M ++
Sbjct: 325 IVGKLKEAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNV- 383
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
Y L C + V A ++F M G + +Y +++SK VD+A LF
Sbjct: 384 -ITYSCLLYGYCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFE 442
Query: 254 EAQSRGL 260
E QS+ +
Sbjct: 443 EMQSKQI 449
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 33/294 (11%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDG 59
ME + G+K + + +++ G S+A ++ + ++ + PD + LI G+C+ G
Sbjct: 93 MELNDGVKPNLVTFNILLNCYSHLGQMSFAFSVLAKIIKIGYHPDVVTFNTLINGYCLKG 152
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLL--HSEAEK 108
+ +E R ++ GF+L ++Y +++ +C +L RQ D L+ H
Sbjct: 153 ENDELLRFYDKVVGLGFQLNQISYGTLINKLCKGGETREALQLLRQVDGKLVQPHVVMYN 212
Query: 109 VLV-----------------EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
VL+ EM + + NV T+N L+ LC + + +DA+ LF M
Sbjct: 213 VLIDRMCKDKLVNVAFDLYYEMLAKRISPNVITYNTLLHGLCIVGQLKDAISLFKIMVSE 272
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
P TF +L+ + ++++ ++ M A G L+ Y + C + +++
Sbjct: 273 NINPTVYTFNILVDGFCKEGKVKDAKVVLAVMMKA--GVKLNAVTYSTLIRGFCIVGKLK 330
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
A+ +F M P + T+ +L+ ++DKAN + + + VTP
Sbjct: 331 EAVDLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKD--VTPN 382
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 30 AERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A+R+ K + R + D ++I +C ++EAR+L EM VV Y++++D
Sbjct: 402 AKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFPDVVTYSSLVD 461
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+C+ ++ P A K++ EM RG P N+ T++ ++ L K + E+A++LF
Sbjct: 462 GLCK--SERIP-----NALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIELFKEF 514
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
+ G PN T+ + I L + RLE+ E+ + + + + +K + + C
Sbjct: 515 KDKGIQPNVYTYTIFIDGLCKNGRLEDAWEVFEDLLVNSYNHNRNKYTWTVMIHGFCRKG 574
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ AL + + MK + C P TY ++S L DKA L
Sbjct: 575 LFDEALTLLSNMKDNSCIPDTVTYKTIISSLLDKGEKDKARKL 617
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 120/258 (46%), Gaps = 10/258 (3%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLAGEM 71
+ ++V+ C +G A+ ++ + + A+ LI+G+C+ GKL+EA L +M
Sbjct: 280 TFNILVDGFCKEGKVKDAKVVLAVMMKAGVKLNAVTYSTLIRGFCIVGKLKEAVDLFNKM 339
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G V + ++D C+ +K +A VL M + V NV T++ L+
Sbjct: 340 ILGKVNPNVYTFTILVDAFCK--EEKI-----DKANYVLNVMMEKDVTPNVITYSCLLYG 392
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C + + +A ++F M + G + ++ ++I + ++E ++ + M+S
Sbjct: 393 YCLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQIFP- 451
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D Y + LC ER+ +ALK+ M G P I TY ++ L ++V++A L
Sbjct: 452 -DVVTYSSLVDGLCKSERIPNALKLVDEMHDRGQPPNIFTYSSILDALLKKHQVEEAIEL 510
Query: 252 FHEAQSRGLAVTPKEYAV 269
F E + +G+ Y +
Sbjct: 511 FKEFKDKGIQPNVYTYTI 528
>Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25194945-25193304 | 20130731
Length = 513
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 9/229 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD LI+G+C G+ E ++L EM V +N ++D CR+
Sbjct: 212 IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID---AFCRKGKMI 268
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
EA+ + M RG ++ TFN LI+ C +A KLF + E G P+ ++
Sbjct: 269 ----EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSY 324
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+LI + R++E + + M+ LD Y + LC R+ +A ++F+ +
Sbjct: 325 TILIIGYCKCKRIDEAVSLFNEMRCKNM--VLDIVLYSSLIDGLCKSGRISYAWELFSTI 382
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
DG P + TY++L+ +D LF +GL T Y +
Sbjct: 383 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 431
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ C G A ++ + R I PD +LI G+C +++EA
Sbjct: 281 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 340
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM L +V Y++++D +C+ R S A ++ ++ G P NV T
Sbjct: 341 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI-------SYAWELFSTINNDGPPPNVIT 393
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI CKI+ + ++LF M G P T+ +LI ++ R+ E ++ M+
Sbjct: 394 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 453
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
S D Y LC R+ A ++F +M G + TY++L+
Sbjct: 454 SKNLAP--DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 503
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 119/262 (45%), Gaps = 16/262 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D + ++ C G + + M + + + I P+ ++LI +C GK+
Sbjct: 209 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 268
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVP 119
EA+ + M + G + +V +N ++ C LH EA K+ + RG+
Sbjct: 269 EAQGMFNLMVKRGQQPDIVTFNTLISGHC----------LHGNVLEARKLFDTVFERGIL 318
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V ++ +LI CK ++ ++A+ LF+ M + + LI L ++ R+ E+
Sbjct: 319 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 378
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ + G + Y + C I+ ++ +++F +M G P + TY++L++
Sbjct: 379 FSTINNDG--PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 436
Query: 240 GAHNRVDKANALFHEAQSRGLA 261
R+ +A L QS+ LA
Sbjct: 437 CKSKRIREAMNLLSVMQSKNLA 458
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ +L + + C G +A ++ L R P+ ++KG C++G++++A
Sbjct: 71 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 130
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G L V Y +++ +C++ R D F ++L EM+ + V N+
Sbjct: 131 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF-------QLLQEMEGQVVKPNIVI 183
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I + CK T A L+ ++ + G P+ T+ LIR + + E +++ M
Sbjct: 184 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 243
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ ++ + + C ++ A +F +M G +P I T++ L+S H
Sbjct: 244 NKNINPNV--YTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 301
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V +A LF RG+ Y +
Sbjct: 302 VLEARKLFDTVFERGILPDVWSYTI 326
>Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196306-25191240 | 20130731
Length = 529
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI+G+C G+ E ++L EM V +N ++D CR+
Sbjct: 230 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID---AFCRKGKMI-- 284
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA+ + M RG ++ TFN LI+ C +A KLF + E G P+ ++ +
Sbjct: 285 --EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 342
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + R++E + + M+ LD Y + LC R+ +A ++F+ +
Sbjct: 343 LIIGYCKCKRIDEAVSLFNEMRCKNM--VLDIVLYSSLIDGLCKSGRISYAWELFSTINN 400
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
DG P + TY++L+ +D LF +GL T Y +
Sbjct: 401 DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 447
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ C G A ++ + R I PD +LI G+C +++EA
Sbjct: 297 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 356
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM L +V Y++++D +C+ R S A ++ ++ G P NV T
Sbjct: 357 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI-------SYAWELFSTINNDGPPPNVIT 409
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI CKI+ + ++LF M G P T+ +LI ++ R+ E ++ M+
Sbjct: 410 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 469
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
S D Y LC R+ A ++F +M G + TY++L+
Sbjct: 470 SKNLAP--DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 519
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D + ++ C G + + M + + + I P+ ++LI +C GK+
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVP 119
EA+ + M + G + +V +N ++ C LH EA K+ + RG+
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHC----------LHGNVLEARKLFDTVFERGIL 334
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V ++ +LI CK ++ ++A+ LF+ M + + LI L ++ R+ E+
Sbjct: 335 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 394
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ + G + Y + C I+ ++ +++F +M G P + TY++L++
Sbjct: 395 FSTINNDG--PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 452
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEY 267
R+ +A L QS+ LA Y
Sbjct: 453 CKSKRIREAMNLLSVMQSKNLAPDSITY 480
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ +L + + C G +A ++ L R P+ ++KG C++G++++A
Sbjct: 87 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 146
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G L V Y +++ +C++ R D F ++L EM+ + V N+
Sbjct: 147 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF-------QLLQEMEGQVVKPNIVI 199
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I + CK T A L+ ++ + G P+ T+ LIR + + E +++ M
Sbjct: 200 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 259
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ ++ + + C ++ A +F +M G +P I T++ L+S H
Sbjct: 260 NKNINPNV--YTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 317
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V +A LF RG+ Y +
Sbjct: 318 VLEARKLFDTVFERGILPDVWSYTI 342
>Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:25196280-25191240 | 20130731
Length = 529
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD LI+G+C G+ E ++L EM V +N ++D CR+
Sbjct: 230 PDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID---AFCRKGKMI-- 284
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA+ + M RG ++ TFN LI+ C +A KLF + E G P+ ++ +
Sbjct: 285 --EAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTI 342
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + R++E + + M+ LD Y + LC R+ +A ++F+ +
Sbjct: 343 LIIGYCKCKRIDEAVSLFNEMRCKNM--VLDIVLYSSLIDGLCKSGRISYAWELFSTINN 400
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
DG P + TY++L+ +D LF +GL T Y +
Sbjct: 401 DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNI 447
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ C G A ++ + R I PD +LI G+C +++EA
Sbjct: 297 GQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEA 356
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM L +V Y++++D +C+ R S A ++ ++ G P NV T
Sbjct: 357 VSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRI-------SYAWELFSTINNDGPPPNVIT 409
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI CKI+ + ++LF M G P T+ +LI ++ R+ E ++ M+
Sbjct: 410 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 469
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
S D Y LC R+ A ++F +M G + TY++L+
Sbjct: 470 SKNLAP--DSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLL 519
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ D + ++ C G + + M + + + I P+ ++LI +C GK+
Sbjct: 225 DMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMI 284
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS---EAEKVLVEMDYRGVP 119
EA+ + M + G + +V +N ++ C LH EA K+ + RG+
Sbjct: 285 EAQGMFNLMVKRGQQPDIVTFNTLISGHC----------LHGNVLEARKLFDTVFERGIL 334
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V ++ +LI CK ++ ++A+ LF+ M + + LI L ++ R+ E+
Sbjct: 335 PDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 394
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ + G + Y + C I+ ++ +++F +M G P + TY++L++
Sbjct: 395 FSTINNDG--PPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGY 452
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEY 267
R+ +A L QS+ LA Y
Sbjct: 453 CKSKRIREAMNLLSVMQSKNLAPDSITY 480
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ +L + + C G +A ++ L R P+ ++KG C++G++++A
Sbjct: 87 GVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKA 146
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ G L V Y +++ +C++ R D F ++L EM+ + V N+
Sbjct: 147 MDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAF-------QLLQEMEGQVVKPNIVI 199
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I + CK T A L+ ++ + G P+ T+ LIR + + E +++ M
Sbjct: 200 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 259
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ ++ + + C ++ A +F +M G +P I T++ L+S H
Sbjct: 260 NKNINPNV--YTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 317
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V +A LF RG+ Y +
Sbjct: 318 VLEARKLFDTVFERGILPDVWSYTI 342
>Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:38145334-38144441 | 20130731
Length = 297
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 114/255 (44%), Gaps = 12/255 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
+L +++ LC G A +++ PD ++ I +C+ G ++EA+ + G M
Sbjct: 47 TLTTLLKALCLNGDVQKALHFHENIVN---PDVCTFNIFIDEFCLQGNMKEAKNILGVMM 103
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
G + VV Y+A++D C L ++A+ M GV ++V +N++I
Sbjct: 104 IQGMKPNVVTYSALMDGYCLLNGV-------NKAKHTFNTMVAVGVAKDVHNYNIVINGF 156
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
CK + ++AL LF M P T+ +I L ++ R+ +++ M+ G A
Sbjct: 157 CKSKMMDEALDLFEEMYSKNIIPTIVTYNTVIDGLCKSGRISYAWKLVREMRDMGQPA-- 214
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
D+ Y FL C +++ A+ + + G + + T +L+ L R+ A +F
Sbjct: 215 DEITYNSFLHTFCKNHQLDKAIALVKEIHNQGIQVDLYTCSMLIDGLSKGGRLKDAQQIF 274
Query: 253 HEAQSRGLAVTPKEY 267
+ +G V Y
Sbjct: 275 KDLLIKGYNVDVVTY 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M+++G+ ++ T N+LI C + + A LF ++ + G +PN T L+++L
Sbjct: 1 MEFQGIRPDIVTINILINRYCHLSQMTFAFSLFGKILKMGYHPNIITLTTLLKALCLNGD 60
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+++ + + + D + F+ C ++ A + +M G +P + TY
Sbjct: 61 VQKALHFHENIVNP------DVCTFNIFIDEFCLQGNMKEAKNILGVMMIQGMKPNVVTY 114
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
LM N V+KA F+ + G+A Y +
Sbjct: 115 SALMDGYCLLNGVNKAKHTFNTMVAVGVAKDVHNYNI 151
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 120/271 (44%), Gaps = 16/271 (5%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKL 61
+ YG+ + + +++ LC G A ++ + L + P L+K + K
Sbjct: 691 KSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKA 750
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ ++ ++ G +L + YN ++ +C L + +A+ VL EM RG+ +
Sbjct: 751 DTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTR-------KAKVVLDEMVKRGISAD 803
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+N LI C E A K + +M G PN TT+ L+ L A ++ D+++
Sbjct: 804 YVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLWGLSNAGLMKGTDKIVR 863
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERV---EHALKVFAMMKADGCEPGIKTYDLLMSK 238
MK GF + A Y L + G RV E + K + M G P TY++L++
Sbjct: 864 GMKERGF---VPNAATYDIL--VSGYGRVGNKEESTKFYREMLTKGFVPTTGTYNVLINC 918
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
R+ KA LF+E +++G Y +
Sbjct: 919 FAKAGRMHKAGELFNEMRTKGRIPNSSTYDI 949
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 110/276 (39%), Gaps = 15/276 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + ++V+ C GF YAE ++ +L + D + LI G+C G + +A
Sbjct: 186 GLCVDSITCNILVKGYCRIGFVRYAEWVMYNLVDGGVTKDVIGLNTLIDGYCECGLMSQA 245
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA------------EKVLVE 112
L + +RG E+ VV YN +L C++ K L +E V+ +
Sbjct: 246 MDLMEKRWRGDVEIDVVTYNTLLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVTQ 305
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
+ R + + T+ LI+ CK E++L L +M G + T ++ +L + +
Sbjct: 306 NEIRNLQPTLVTYTTLISAYCKFVGVEESLSLSEQMIMNGIMSDVVTCSSILYALCRHGK 365
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
L E M G + +Y + L RV A + + M G I T
Sbjct: 366 LTEAAVFFKEMYEMGLDP--NHVSYATIINSLFKSGRVMEAFNLQSQMVVRGVSFDIVTC 423
Query: 233 DLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+M L + +A +F LA Y+
Sbjct: 424 TTIMDGLFKVRKTKEAEEMFETILKLNLAPNCVTYS 459
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 111/323 (34%), Gaps = 77/323 (23%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++ L G A +VKD+ ++ I PD LI G+ +G A + EM
Sbjct: 565 ILLNNLKRVGRMDAARPLVKDMHSKGIDPDIVNYTSLIDGYFKEGNESAALSIVQEMTEK 624
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
VVA N ++ + L + DP + V M G+ N T+N +I + C
Sbjct: 625 NTRFDVVACNTLIKGLLRLGKY-DP-------QNVCSRMIELGLAPNCVTYNTIINSYCI 676
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG------- 187
EDAL + M +G PN T+ +LI L + +++ ++++ M G
Sbjct: 677 KGNIEDALGILIEMKSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPIT 736
Query: 188 --------------------------FGASLDKKAYYQFLTILC--GIER---------- 209
G L Y +T+LC G+ R
Sbjct: 737 HKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLTVYNTLITVLCRLGMTRKAKVVLDEMV 796
Query: 210 -----------------------VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
VE A K + M DG P I TY+ L+ L +
Sbjct: 797 KRGISADYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLWGLSNAGLMK 856
Query: 247 KANALFHEAQSRGLAVTPKEYAV 269
+ + + RG Y +
Sbjct: 857 GTDKIVRGMKERGFVPNAATYDI 879
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 31/273 (11%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + V+ C KG ++ ++ R + D C++L+KG+C G + A +
Sbjct: 155 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCVDSITCNILVKGYCRIGFVRYAEWVM 214
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRNVETFNV 127
+ GG V+ N ++D CE C L S+A L+E +RG V +V T+N
Sbjct: 215 YNLVDGGVTKDVIGLNTLIDGYCE-CG------LMSQAMD-LMEKRWRGDVEIDVVTYNT 266
Query: 128 LITNLCKIRKTEDALKLFHRMGEW-------------------GCYPNETTFVVLIRSLY 168
L+ CK+ + A LF+ + + P T+ LI +
Sbjct: 267 LLKAFCKMGDLKRAESLFNEIFAFQKDEDQLTNNDVVTQNEIRNLQPTLVTYTTLISAYC 326
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ +EE + ++M G + D L LC ++ A F M G +P
Sbjct: 327 KFVGVEESLSLSEQMIMNGIMS--DVVTCSSILYALCRHGKLTEAAVFFKEMYEMGLDPN 384
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+Y +++ L RV +A L + RG++
Sbjct: 385 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGVS 417
>Medtr5g090210.1 | PPR containing plant-like protein | HC |
chr5:39298399-39301458 | 20130731
Length = 730
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + ++ LC A+ + K++ R +FPD LI G+C DG + +A
Sbjct: 443 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA 502
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L M + VV YN ++D C++ + +A+++ +M R + + +
Sbjct: 503 LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEME-------KAKELWYDMISREIFPSYIS 555
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F++LI C + +A +L+ M E G P T +I+ +A L + ++ ++ M
Sbjct: 556 FSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMI 615
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S G D Y + E + A + M+ G P + TY+ ++ H R
Sbjct: 616 SEGVPP--DCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGR 673
Query: 245 VDKANALFHEAQSRGLAVTPKEYA 268
+ +A + H+ +G+ Y
Sbjct: 674 MQEAEMVLHKMIDKGINPDKSTYT 697
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 12/258 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+L ++V LC G + ++ + ++ D + L+ +C G + EA L M
Sbjct: 240 TLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCM 299
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + G+ YNA+++ LC++ + A++VL EM G+ N TFN ++
Sbjct: 300 AGKGLKPGLFTYNALIN---GLCKEGS----YERAKRVLDEMLGVGLCPNAATFNPMLVE 352
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C+ +A ++F+ M + G P+ +F ++ + L ++MK G G
Sbjct: 353 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK--GVGLV 410
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D Y + C + V ALK+ M GC + TY+ L++ L +D A+ L
Sbjct: 411 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 470
Query: 252 FHEAQSRGLAVTPKEYAV 269
F E RG V P Y +
Sbjct: 471 FKEMVERG--VFPDFYTL 486
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 10/223 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
LK D + +++ C G A+ + D ++R IFP +LI G+C G + EA
Sbjct: 513 SLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEA 572
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL EM G + +V N ++ S+A L M GVP + T
Sbjct: 573 FRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNL-------SKANDFLNTMISEGVPPDCIT 625
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI + K + A L + M E G PN T+ ++ + R++E + ++ +M
Sbjct: 626 YNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI 685
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
G DK Y + + ++ A +V M G P
Sbjct: 686 DKGINP--DKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVP 726
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 36/251 (14%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC--------- 91
+ PD + +LI G+C + + A ++ EM G + VV YN +L+ +C
Sbjct: 409 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDAD 468
Query: 92 ELCRQ---KDPF--------LLH--------SEAEKVLVEMDYRGVPRNVETFNVLITNL 132
EL ++ + F L+H ++A + M R + +V T+N L+
Sbjct: 469 ELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGF 528
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
CK+ + E A +L++ M +P+ +F +LI + E + D MK G +L
Sbjct: 529 CKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTL 588
Query: 193 DKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
TI+ G R + A M ++G P TY+ L++ D+A
Sbjct: 589 VTCN-----TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAF 643
Query: 250 ALFHEAQSRGL 260
L + + RGL
Sbjct: 644 FLINNMEERGL 654
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 10/259 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ + C K AER+ + L R + PD ++ + +G+L A
Sbjct: 338 GLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRA 397
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+M G V Y +++ CR D S A K+ EM RG +V T
Sbjct: 398 LAYFEKMKGVGLVPDTVIYTILIN---GYCRNDDV----SGALKMRNEMVERGCVMDVVT 450
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ LC+ + +DA +LF M E G +P+ T LI + + + + + M
Sbjct: 451 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 510
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + C + +E A +++ M + P ++ +L++ +
Sbjct: 511 LRSLKP--DVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 568
Query: 245 VDKANALFHEAQSRGLAVT 263
V +A L+ E + +G+ T
Sbjct: 569 VSEAFRLWDEMKEKGIKPT 587
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 9/222 (4%)
Query: 48 CDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE 107
C+ L+ G ++ A ++ + + G + V N M++ +C KD L
Sbjct: 206 CNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALC-----KDGKL--DNVG 258
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
L EM+ +GV ++ T+N L+ C+ +A L M G P T+ LI L
Sbjct: 259 VYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGL 318
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
+ E ++D M G G + + L C E V A +VF M G P
Sbjct: 319 CKEGSYERAKRVLDEM--LGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP 376
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ ++ ++ + + +A A F + + GL Y +
Sbjct: 377 DLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 418
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 9/213 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
D+LI+ + KL E + + GF + + A NA+L + ++ A K
Sbjct: 172 DLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWV-------DLAWK 224
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
V + G NV T N+++ LCK K ++ M E G Y + T+ L+ +
Sbjct: 225 VYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYC 284
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + E ++D M G L Y + LC E A +V M G P
Sbjct: 285 RRGLVSEAFGLVDCMAGKGLKPGL--FTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 342
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
T++ ++ + V +A +F+E RG+
Sbjct: 343 AATFNPMLVESCRKEDVWEAERVFNEMLQRGVV 375
>Medtr6g075180.1 | PPR containing plant-like protein | HC |
chr6:27846701-27844575 | 20130731
Length = 524
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 12/261 (4%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ LC AE + K + + I P+ ++L+ GWC ++ EM
Sbjct: 190 NAFNFLLDALCKCCLVEEAEGLYKRMRKKINPNGDTYNILVFGWCRVRNPSRGMKVLEEM 249
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG---VPRNVETFNVL 128
+ G + YN LD C K+ + ++A ++ M +G +++++L
Sbjct: 250 IQLGHKPDNFTYNTALDTYC-----KEGMI--TDAVELFEFMRTKGSIISSPTAKSYSIL 302
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I L + + E+ K M GC P+ TT+ +I + +++E + ++ M G+
Sbjct: 303 IVALVQNDRMEECFKFMGHMISSGCLPDVTTYKDIIEGMCLCGKIDEAYKFLEEMGKKGY 362
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D + FL +LC ++ E ALK++ M C P ++TY++L+S + D A
Sbjct: 363 PP--DIVTHNCFLKVLCHNKKSEEALKLYGRMIELSCIPSVQTYNMLISMFFKMDDPDGA 420
Query: 249 NALFHEAQSRGLAVTPKEYAV 269
+HE + RG Y V
Sbjct: 421 FETWHEMEKRGCRPDTDTYGV 441
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 48/266 (18%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G K D + ++ C +G + A E M + + P +LI + ++
Sbjct: 253 GHKPDNFTYNTALDTYCKEGMITDAVELFEFMRTKGSIISSPTAKSYSILIVALVQNDRM 312
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EE + G M G V Y +++ +C LC + D EA K L EM +G P +
Sbjct: 313 EECFKFMGHMISSGCLPDVTTYKDIIEGMC-LCGKID------EAYKFLEEMGKKGYPPD 365
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ T N + LC +K+E+ALKL+ RM E C P+ T+ +LI ++
Sbjct: 366 IVTHNCFLKVLCHNKKSEEALKLYGRMIELSCIPSVQTYNMLISMFFK------------ 413
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
++ + A + + M+ GC P TY +++ L
Sbjct: 414 -------------------------MDDPDGAFETWHEMEKRGCRPDTDTYGVMIEGLFN 448
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
N+ + A L E ++G+ + +++
Sbjct: 449 CNKAEDACILLEEVINKGIKLPYRKF 474
>Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:138663-140807 | 20130731
Length = 452
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 45/264 (17%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + Y+E +A+ I+PD LI G+C+ G+ ++A RL EM
Sbjct: 147 DKLVLDAYGLYSEM----IAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKNINR 202
Query: 79 GVVAYNAMLDCVCELCRQK-------------------------DPFLLHSEAEK---VL 110
V +N ++D +C+ K D + L +E K V
Sbjct: 203 DVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVF 262
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+ GV + T++++I CKI+ ++AL LF M G PN T+ LI L ++
Sbjct: 263 NIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKS 322
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R+ E++D M + G A D Y + LC ++ G +P +
Sbjct: 323 GRIPYAWELVDTMHNNGQPA--DIFTYNSLIDALCKNHHIDQ-----------GIQPDMY 369
Query: 231 TYDLLMSKLGAHNRVDKANALFHE 254
TY++L+ L R+ A +F +
Sbjct: 370 TYNILIDGLCKGGRLKNAQDIFQD 393
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 20/235 (8%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG----FELGVVAYNAMLDCVCE 92
L+ + D +CD CVD K+ E R A +M R VV +N ++D +C
Sbjct: 94 LSVNVVSDTCVCD------CVDCKMGETRA-ALQMLRKIEGKLINTNVVMHNTIIDSLC- 145
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
KD +L +A + EM + + +V TF+ LI C + + +DA +LFH M
Sbjct: 146 ----KDKLVL--DAYGLYSEMIAKKIYPDVVTFSSLIYGFCIVGQFKDAFRLFHEMVLKN 199
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
+ TF +L+ +L + ++ ++ M G D Y + C + V
Sbjct: 200 INRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIP--DVVTYGSLMDGYCLVNEVNK 257
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
A VF ++ G P TY ++++ VD+A +LF E + RG+A Y
Sbjct: 258 AKHVFNIISQMGVAPDAHTYSIMINGFCKIKMVDEALSLFDEMRRRGIAPNTVTY 312
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 12/240 (5%)
Query: 22 CSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
C G A +M++ + ++I + M + +I C D + +A L EM V
Sbjct: 110 CKMGETRAALQMLRKIEGKLINTNVVMHNTIIDSLCKDKLVLDAYGLYSEMIAKKIYPDV 169
Query: 81 VAYNAMLDCVCELCRQKDPF-LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
V +++++ C + + KD F L H EM + + R+V TFN+L+ LCK +
Sbjct: 170 VTFSSLIYGFCIVGQFKDAFRLFH--------EMVLKNINRDVYTFNILVDALCKEGDVK 221
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A L M + G P+ T+ L+ + + + + + G D Y
Sbjct: 222 VAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKAKHVFNIISQMGVAP--DAHTYSI 279
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ C I+ V+ AL +F M+ G P TY+ L+ L R+ A L + G
Sbjct: 280 MINGFCKIKMVDEALSLFDEMRRRGIAPNTVTYNSLIDGLCKSGRIPYAWELVDTMHNNG 339
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 20/264 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
+ RD + ++V+ LC +G A+ ++ + + + PD L+ G+C+ ++ +A
Sbjct: 199 NINRDVYTFNILVDALCKEGDVKVAKNLLAVMMKEGVIPDVVTYGSLMDGYCLVNEVNKA 258
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + + + G Y+ M++ C++ + D EA + EM RG+ N T
Sbjct: 259 KHVFNIISQMGVAPDAHTYSIMINGFCKI-KMVD------EALSLFDEMRRRGIAPNTVT 311
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE------ 178
+N LI LCK + A +L M G + T+ LI +L + +++G +
Sbjct: 312 YNSLIDGLCKSGRIPYAWELVDTMHNNGQPADIFTYNSLIDALCKNHHIDQGIQPDMYTY 371
Query: 179 --MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ID + G + + +Q L I G+ AL + M +G P TY ++
Sbjct: 372 NILIDGLCKG--GRLKNAQDIFQDLLIKEGLFDEVDAL--MSKMDDNGIIPDAVTYVTII 427
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
L + ++A L E +RGL
Sbjct: 428 RALFHKDENEQAEKLLREMIARGL 451
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 34 VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCEL 93
+K+ A+ D+LIK + ++ A R GF GV++YN++LD +
Sbjct: 108 IKETYHTTNSSSAVFDLLIKSYSQLNLIDNAIHTLHLATRHGFSPGVLSYNSILDSII-- 165
Query: 94 CRQKDPFLLHS--EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
+ P L S +A +V +M V N+ T+NV+I + + + + L + M
Sbjct: 166 --RSGPHSLLSIQQANRVFCDMVRNNVSPNIYTYNVMIRGMVSVGRFDSGLHFMNEMETK 223
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
GC PN T+ +I + +L+E ++ M A+L +Y + LCG R+
Sbjct: 224 GCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANL--ISYNAVINGLCGQGRMN 281
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++V M G P TY+ L++ +A L HE +GL+ Y
Sbjct: 282 ETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEMSGKGLSPNVVTYTT 339
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ +I G C G++ E + EM G V YN +++ C KD +A
Sbjct: 268 NAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFC-----KDGNF--HQALV 320
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+L EM +G+ NV T+ LI +CK++ A+++ M + G PNE T+ L+
Sbjct: 321 LLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFC 380
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ + E +++ M +GF S+ Y + C + RVE A+ V M G P
Sbjct: 381 RQGLMNEAYKVLSEMVDSGFVPSV--VTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPD 438
Query: 229 IKTYDLLMSKLGAHNRVDKA 248
+ +Y ++S + + KA
Sbjct: 439 VVSYSTVISLFCRNGELGKA 458
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 10/250 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S V+ LC +G + ++++++ + + PD + L+ G+C DG +A L EM
Sbjct: 266 SYNAVINGLCGQGRMNETMEVIEEMSLKGLSPDCVTYNTLVNGFCKDGNFHQALVLLHEM 325
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G VV Y +++ +C++ S A ++L M RG+ N T+ L+
Sbjct: 326 SGKGLSPNVVTYTTLINGMCKVKNL-------SRAMEILSLMRDRGLSPNERTYTTLVDG 378
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
C+ +A K+ M + G P+ T+ L+ R+EE ++ M G
Sbjct: 379 FCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFP- 437
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D +Y +++ C + A ++ M P TY L+ L ++ +A L
Sbjct: 438 -DVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAVTYSSLIQGLCCQRKLSEAFDL 496
Query: 252 FHEAQSRGLA 261
F E RGL+
Sbjct: 497 FQEMLGRGLS 506
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 9/214 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R + P+E L+ G+C G + EA ++ EM GF VV YNA+++ C L R +
Sbjct: 363 RGLSPNERTYTTLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVE- 421
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
EA VL +M RG+ +V +++ +I+ C+ + A ++ M E P+
Sbjct: 422 ------EAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKRILPDAV 475
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ LI+ L +L E ++ M G G S D+ Y + C + AL +
Sbjct: 476 TYSSLIQGLCCQRKLSEAFDLFQEM--LGRGLSPDEVTYTTLMNGYCVEGELSKALDLHD 533
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
M G P + TY +L++ L R +A L
Sbjct: 534 EMMQKGFLPDVVTYSVLINGLNKKARTREAKKLL 567
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 21/265 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLE 62
D G + +V C G A ++KD+ R +FPD +I +C +G+L
Sbjct: 397 DSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGLFPDVVSYSTVISLFCRNGELG 456
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A ++ EM V Y++++ +C C++K SEA + EM RG+ +
Sbjct: 457 KAFQMKLEMVEKRILPDAVTYSSLIQGLC--CQRK-----LSEAFDLFQEMLGRGLSPDE 509
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+ L+ C + AL L M + G P+ T+ VLI L + AR E +++ +
Sbjct: 510 VTYTTLMNGYCVEGELSKALDLHDEMMQKGFLPDVVTYSVLINGLNKKARTREAKKLLLK 569
Query: 183 M-------KSAGFGASLDKKAYYQFLTIL------CGIERVEHALKVFAMMKADGCEPGI 229
+ + ++ + +F +++ C ++ A +VF M +P
Sbjct: 570 LFYDESVPNDVTYETLIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDG 629
Query: 230 KTYDLLMSKLGAHNRVDKANALFHE 254
Y+L++ H V KA ++ E
Sbjct: 630 TVYNLIIHGHCRHGNVRKAYNMYTE 654
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + +++ LC + S A + ++ L R + PDE L+ G+CV+G+L +A L
Sbjct: 473 DAVTYSSLIQGLCCQRKLSEAFDLFQEMLGRGLSPDEVTYTTLMNGYCVEGELSKALDLH 532
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDY-RGVPRNVETFNV 127
EM + GF VV Y+ +++ + + R + EA+K+L+++ Y VP +V T+
Sbjct: 533 DEMMQKGFLPDVVTYSVLINGLNKKARTR-------EAKKLLLKLFYDESVPNDV-TYET 584
Query: 128 LITN---------------LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
LI N C ++A ++F M + P+ T + ++I +
Sbjct: 585 LIENCSGNEFKSVVGLVKGFCMKGLMDEADRVFETMHQRNFKPDGTVYNLIIHGHCRHGN 644
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+ + M M GF V H + V A++KA
Sbjct: 645 VRKAYNMYTEMVHCGF---------------------VSHMVTVIALIKA 673
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 13/267 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D+G++ + V LC+ A ++K+L+ + PD + L+K C L
Sbjct: 158 GISPDKGTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLV 217
Query: 65 RRLAGEMYRGGFEL--GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
EM R F++ +V Y ++D VC + EA +++ ++ G +
Sbjct: 218 YAFIDEM-RTKFDVKPNLVTYTILIDNVCNTKNLR-------EATRLVDILEEEGFKPDC 269
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
+N ++ C + + +A+++++RM E G P+ T+ LI L ++ R+ E +++
Sbjct: 270 FLYNTIMKGYCMLSRGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRV 329
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G D+ Y + +C AL + M+ GC P TY+ L+ L
Sbjct: 330 MAEKGHFP--DEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKS 387
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
DKA L+ +S GL + YA
Sbjct: 388 RMFDKAMELYGAMKSDGLKLDMASYAT 414
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDG 59
M + +K + + ++++ +C+ A R+V L F PD + + ++KG+C+
Sbjct: 224 MRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLS 283
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+ EA + M G E ++ YN ++ + + R SEA+K+L M +G
Sbjct: 284 RGSEAIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRV-------SEAKKLLRVMAEKGHF 336
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ T+ L+ +C+ +T AL L M GC PN T+ L+ L ++ ++ E+
Sbjct: 337 PDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMEL 396
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
MKS G LD +Y F+ LC + RV A +VF + Y L S L
Sbjct: 397 YGAMKSDGL--KLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAYSTLESTL 454
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 14/256 (5%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIF---PDEAMCDMLIKGWCVDGKLEEARR 66
D S +V+ LC S + ++ R F P+ +LI C L EA R
Sbjct: 197 DIYSYNFLVKNLCKSRTLSLVYAFIDEM-RTKFDVKPNLVTYTILIDNVCNTKNLREATR 255
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
L + GF+ YN ++ C L R SEA +V M +GV ++ T+N
Sbjct: 256 LVDILEEEGFKPDCFLYNTIMKGYCMLSRG-------SEAIEVYNRMKEKGVEPDLITYN 308
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
LI L K + +A KL M E G +P+E T+ L+ + + +++ M+
Sbjct: 309 TLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMK 368
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
G S + Y L LC + A++++ MK+DG + + +Y + L + RV
Sbjct: 369 G--CSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVA 426
Query: 247 KANALFHEA-QSRGLA 261
A +F A +S+ L+
Sbjct: 427 DAYEVFDYAVESKSLS 442
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 13/251 (5%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL F Y E K +FP+ LI G+C+ G+L++A L EM
Sbjct: 163 DKLVRDAFDLYCEMFEKR----VFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNP 218
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
V +N ++D +C+ + + EA+ ++ M GV +V T+N L+ +++
Sbjct: 219 NVCTFNTLVDGLCKEGKMR-------EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEA 271
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
A +F+ M + G + ++ V+I L + L+E ++ + M++ D AY
Sbjct: 272 GKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIP--DVVAYS 329
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC R+ ALK M G P + TY L+ L ++VDKA AL + + +
Sbjct: 330 SLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQ 389
Query: 259 GLAVTPKEYAV 269
G+ Y +
Sbjct: 390 GIQANMYTYNI 400
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
K F E ++K+ + P+ + L+ G C +GK+ EA+ L M + G V Y
Sbjct: 203 KAFGLLNEMVLKN----VNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 258
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
NA++D + L EA K V M GV +V +++V+I+ L K++ ++
Sbjct: 259 NALMD----------GYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDE 308
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A+ LF M P+ + LI L ++ R+ + +D M G ++ Y
Sbjct: 309 AMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNV--ITYTSL 366
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ LC +V+ A+ + +K G + + TY++L+ L R+ A +F + +G
Sbjct: 367 IDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGH 426
Query: 261 AVTPKEYAV 269
V Y++
Sbjct: 427 NVDVVTYSI 435
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 9/211 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I G L+EA L M VVAY++++D +C+ R + A K
Sbjct: 295 VMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRI-------NSALKY 347
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ EM RG P NV T+ LI LCK + + A+ L ++ + G N T+ +L+ L +
Sbjct: 348 VDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCK 407
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
RL + ++ + G ++D Y + LC + AL + + M+ GC P
Sbjct: 408 DGRLTDAQKVFQDLLMKGH--NVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDA 465
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
Y+ +++ + DKA L E +R L
Sbjct: 466 IAYETIINAFFEKDMNDKAEKLLREMIARRL 496
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 5 YGLKRDRGSLKVVVEKLC-----SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDG 59
+G++ + +L +++ C + F+ +A K L PD LI+G C++G
Sbjct: 39 HGIQSNYITLNILINSYCHLRQINSAFSVFA----KILKLGYQPDIITYTTLIRGLCLNG 94
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+++E+ + G +L V+Y +++ +C++ Q P A ++L +++
Sbjct: 95 QVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKI-GQTGP------ALRLLRKIEGEICR 147
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V +N +I LCK + DA L+ M E +PN T+ LI +L++ +
Sbjct: 148 PDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGL 207
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
++ M ++ + + LC ++ A + A+M +G P + TY+ LM
Sbjct: 208 LNEMVLKNVNPNV--CTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 265
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
KA +F+ G+ Y+V
Sbjct: 266 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSV 295
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 7/156 (4%)
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
P ++H + M+ G+ N T N+LI + C +R+ A +F ++ + G P+
Sbjct: 27 PIVIH-----LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDII 81
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+ LIR L +++E DR+ S G LD +Y + LC I + AL++
Sbjct: 82 TYTTLIRGLCLNGQVKESLNFHDRLVSQGI--KLDHVSYGTLINGLCKIGQTGPALRLLR 139
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
++ + C P + Y+ ++ L V A L+ E
Sbjct: 140 KIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCE 175
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 8/168 (4%)
Query: 17 VVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LC G + A + V ++ R P+ LI C ++++A L ++ G
Sbjct: 331 LIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQG 390
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ + YN ++D +C+ R D A+KV ++ +G +V T++++I LCK
Sbjct: 391 IQANMYTYNILVDGLCKDGRLTD-------AQKVFQDLLMKGHNVDVVTYSIMINGLCKE 443
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
++AL L +M + GC P+ + +I + ++ ++ ++++ M
Sbjct: 444 SLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 491
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 12/223 (5%)
Query: 30 AERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A R+ DL R FPD M +IKG+C G L EAR+L EM + G YN M
Sbjct: 290 AFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKLWFEMIQKGLVPNEYTYNVM-- 347
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ C+ +D +EA K+ +M RG NV +++ +I+ L KT++AL LFH M
Sbjct: 348 -IYGYCKVRD----FAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEM 402
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
G + ++ LI+ L Q L + +++++ G S+ ++ + LC +
Sbjct: 403 SRKGIARDLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSV--SSFTPLIKCLCKVG 460
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
E A+++ M EP T+D ++ +G + D A +
Sbjct: 461 DTEGAMRLLKDMHDRHLEPIASTHDYMI--IGLSKKGDFAQGM 501
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 94/211 (44%), Gaps = 9/211 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LIK +C + K+ L ++ G + +NA+++ C+QK + ++L
Sbjct: 207 LIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALIN---GFCKQKQ----YDRVSEIL 259
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M ++ T+ +I L K RK ++A ++F+ + + G +P+ + +I+
Sbjct: 260 HIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDM 319
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
L E ++ M G ++ Y + C + A K++ M G +
Sbjct: 320 GLLAEARKLWFEMIQKGLVP--NEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVV 377
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+Y ++S L H + D+A +LFHE +G+A
Sbjct: 378 SYSTMISGLYLHGKTDEALSLFHEMSRKGIA 408
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 101/256 (39%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D ++ C K + +E + +A P +I G K +EA
Sbjct: 231 GLCVDNTVFNALINGFCKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEA 290
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R+ ++ G+ V Y ++ C++ L +EA K+ EM +G+ N T
Sbjct: 291 FRVFNDLKDRGYFPDRVMYTTVIKGFCDMG-------LLAEARKLWFEMIQKGLVPNEYT 343
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+NV+I CK+R +A KL+ M G N ++ +I LY + +E + M
Sbjct: 344 YNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYLHGKTDEALSLFHEMS 403
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D +Y + LC + A + + G EP + ++ L+ L
Sbjct: 404 RKGIAR--DLISYNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGD 461
Query: 245 VDKANALFHEAQSRGL 260
+ A L + R L
Sbjct: 462 TEGAMRLLKDMHDRHL 477
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 9 RDRGSLKVVVEKLCSKGFA----SYAERMVKDLARVIFPDEAMC---------------- 48
RD + + + +C +G+A SY+ M+ L DEA+
Sbjct: 355 RDFAEARKLYDDMCGRGYAENVVSYST-MISGLYLHGKTDEALSLFHEMSRKGIARDLIS 413
Query: 49 -DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE 107
+ LIKG C +G+L +A L ++ G E V ++ ++ C+C++ + A
Sbjct: 414 YNSLIKGLCQEGELAKATNLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEG-------AM 466
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
++L +M R + T + +I L K ++ +M W PN TF LI L
Sbjct: 467 RLLKDMHDRHLEPIASTHDYMIIGLSKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCL 526
Query: 168 YQAARLEEGDEMIDRMKSAGF 188
+ RL++ ++D M G+
Sbjct: 527 KRENRLDDILIVLDLMFREGY 547
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 107/227 (47%), Gaps = 10/227 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +C LIKG+ K+E+A ++ + + G + V AYNA++ C+ R
Sbjct: 110 PDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRV------ 162
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A KVL M RG +V T+N+LI N C + + AL++ ++ + C P T+ +
Sbjct: 163 -DHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTI 221
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + ++E +++D M S G D+ Y + +C ++ A + + +
Sbjct: 222 LIEATITQGGIDEAMKLLDEMLSRGLRP--DRYTYNVVVNGMCKEGMLDRAFEFLSRISK 279
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+GC G+ TY++L+ L + + L + +G P Y+
Sbjct: 280 NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYST 326
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 10/253 (3%)
Query: 8 KRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARR 66
K D + V+ C +A +++ + + F PD ++LI +C G+L+ A R
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
+ ++ + + V+ Y +++ EA K+L EM RG+ + T+N
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGI-------DEAMKLLDEMLSRGLRPDRYTYN 255
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
V++ +CK + A + R+ + GC +T+ +L+R L + E G++++ M
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
G + Y +T LC +++ A V +MK P +YD L+S L +VD
Sbjct: 316 G--CEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVD 373
Query: 247 KANALFHEAQSRG 259
A + S G
Sbjct: 374 LAIEFLDDMISGG 386
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 114/239 (47%), Gaps = 11/239 (4%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGE 70
+ +++ L ++G Y E+++ D L + P+ LI C DGK++EA+ +
Sbjct: 287 STYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKV 346
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M +Y+ + + LCR+ L A + L +M G ++ ++N ++
Sbjct: 347 MKEKALAPDGYSYDPL---ISALCREGKVDL----AIEFLDDMISGGHLPDILSYNSILA 399
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+LCK ++AL +F ++GE GC PN ++ L +L+ + MI M S G
Sbjct: 400 SLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDP 459
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFA-MMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
D+ Y ++ LC V+ A+++ M +++ C+P + +Y+ ++ L R+ A
Sbjct: 460 --DEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDA 516
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 10/246 (4%)
Query: 16 VVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++E ++G A +++ + L+R + PD ++++ G C +G L+ A + +
Sbjct: 221 ILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKN 280
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G GV YN +L + + + EK++ +M +G N T++ LIT LC+
Sbjct: 281 GCVAGVSTYNILLRDLLNEGKWE-------YGEKLMSDMLVKGCEPNPITYSTLITALCR 333
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
K ++A + M E P+ ++ LI +L + +++ E +D M S G D
Sbjct: 334 DGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP--DI 391
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+Y L LC + AL +F + GC P +Y+ L L + +A + E
Sbjct: 392 LSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILE 451
Query: 255 AQSRGL 260
S G+
Sbjct: 452 MLSNGI 457
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 11/230 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++ LC G A+ ++K + + + PD D LI C +GK++ A +M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
GG +++YN++L LC+ + EA + ++ G P N ++N L
Sbjct: 383 ISGGHLPDILSYNSIL---ASLCKNGNA----DEALNIFEKLGEVGCPPNAGSYNTLFGA 435
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM-IDRMKSAGFGA 190
L AL + M G P+E T+ LI L + +++ E+ +D +S
Sbjct: 436 LWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQP 495
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
++ +Y L LC ++R+ A++V A M +GC P TY LL+ +G
Sbjct: 496 TV--ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIG 543
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 10/263 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + +++ C +G A R++ L + P +LI+ G ++EA
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM G YN +++ +C K+ L A + L + G V T
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMC-----KEGML--DRAFEFLSRISKNGCVAGVST 288
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+L+ +L K E KL M GC PN T+ LI +L + +++E ++ MK
Sbjct: 289 YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMK 348
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D +Y ++ LC +V+ A++ M + G P I +Y+ +++ L +
Sbjct: 349 EKALAP--DGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGN 406
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
D+A +F + G Y
Sbjct: 407 ADEALNIFEKLGEVGCPPNAGSY 429
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 31/284 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y ++ + ++ LC A+ + + PD +L++GW + L +A
Sbjct: 160 YDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKA 219
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS 104
R + GEM G +V Y M+D +C E+ ++ D L+H+
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHT 279
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + +EM+ G+ +V +N LI CK K ++ ++ M G PN
Sbjct: 280 YGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPN 339
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T V++ SL ++ + RM D Y + + C V+ ALK+
Sbjct: 340 SRTCNVIMSSLISQGETDKAFSVFRRMIKL---CEPDADTYTMLIKMFCERNEVDMALKI 396
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ MK+ P + T+ +L++ L A KA L E +G+
Sbjct: 397 WKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAA 171
MD P+N+ FN L++ LCK R A ++F M G + P+ T+ +L+ +
Sbjct: 157 MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGWGKEP 214
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
L + E+ M SAG + D Y + ILC RV+ A++V M + C P
Sbjct: 215 NLPKAREVFGEMVSAG--CNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI 272
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y +L+ G +R++ A +F E + G+A
Sbjct: 273 YSVLVHTYGVESRIEDAIDMFMEMEKNGIA 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NVETF +++ + K ++A+ F+ M ++ N F L+ +L ++ + + E+
Sbjct: 130 NVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIF 189
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D MK D K Y L + A +VF M + GC P I TY +++ L
Sbjct: 190 DSMKGR---FEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILC 246
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
RVD+A + E T Y+V
Sbjct: 247 KAGRVDEAVEVVKEMDDNDCRPTSFIYSV 275
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 31/284 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y ++ + ++ LC A+ + + PD +L++GW + L +A
Sbjct: 160 YDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKA 219
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS 104
R + GEM G +V Y M+D +C E+ ++ D L+H+
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHT 279
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + +EM+ G+ +V +N LI CK K ++ ++ M G PN
Sbjct: 280 YGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPN 339
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T V++ SL ++ + RM D Y + + C V+ ALK+
Sbjct: 340 SRTCNVIMSSLISQGETDKAFSVFRRMIKL---CEPDADTYTMLIKMFCERNEVDMALKI 396
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ MK+ P + T+ +L++ L A KA L E +G+
Sbjct: 397 WKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAA 171
MD P+N+ FN L++ LCK R A ++F M G + P+ T+ +L+ +
Sbjct: 157 MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGWGKEP 214
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
L + E+ M SAG + D Y + ILC RV+ A++V M + C P
Sbjct: 215 NLPKAREVFGEMVSAG--CNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI 272
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y +L+ G +R++ A +F E + G+A
Sbjct: 273 YSVLVHTYGVESRIEDAIDMFMEMEKNGIA 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NVETF +++ + K ++A+ F+ M ++ N F L+ +L ++ + + E+
Sbjct: 130 NVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIF 189
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D MK D K Y L + A +VF M + GC P I TY +++ L
Sbjct: 190 DSMKGR---FEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILC 246
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
RVD+A + E T Y+V
Sbjct: 247 KAGRVDEAVEVVKEMDDNDCRPTSFIYSV 275
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 31/284 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y ++ + ++ LC A+ + + PD +L++GW + L +A
Sbjct: 160 YDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKA 219
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS 104
R + GEM G +V Y M+D +C E+ ++ D L+H+
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHT 279
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + +EM+ G+ +V +N LI CK K ++ ++ M G PN
Sbjct: 280 YGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPN 339
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T V++ SL ++ + RM D Y + + C V+ ALK+
Sbjct: 340 SRTCNVIMSSLISQGETDKAFSVFRRMIKL---CEPDADTYTMLIKMFCERNEVDMALKI 396
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ MK+ P + T+ +L++ L A KA L E +G+
Sbjct: 397 WKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAA 171
MD P+N+ FN L++ LCK R A ++F M G + P+ T+ +L+ +
Sbjct: 157 MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGWGKEP 214
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
L + E+ M SAG + D Y + ILC RV+ A++V M + C P
Sbjct: 215 NLPKAREVFGEMVSAG--CNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI 272
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y +L+ G +R++ A +F E + G+A
Sbjct: 273 YSVLVHTYGVESRIEDAIDMFMEMEKNGIA 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NVETF +++ + K ++A+ F+ M ++ N F L+ +L ++ + + E+
Sbjct: 130 NVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIF 189
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D MK D K Y L + A +VF M + GC P I TY +++ L
Sbjct: 190 DSMKGR---FEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILC 246
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
RVD+A + E T Y+V
Sbjct: 247 KAGRVDEAVEVVKEMDDNDCRPTSFIYSV 275
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 116/284 (40%), Gaps = 31/284 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y ++ + ++ LC A+ + + PD +L++GW + L +A
Sbjct: 160 YDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFEPDSKTYSILLEGWGKEPNLPKA 219
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKD-----------PFLLHS 104
R + GEM G +V Y M+D +C E+ ++ D L+H+
Sbjct: 220 REVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFIYSVLVHT 279
Query: 105 --------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+A + +EM+ G+ +V +N LI CK K ++ ++ M G PN
Sbjct: 280 YGVESRIEDAIDMFMEMEKNGIAADVVVYNALIGAFCKANKLKNVHRVLKEMESNGIAPN 339
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T V++ SL ++ + RM D Y + + C V+ ALK+
Sbjct: 340 SRTCNVIMSSLISQGETDKAFSVFRRMIKL---CEPDADTYTMLIKMFCERNEVDMALKI 396
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ MK+ P + T+ +L++ L A KA L E +G+
Sbjct: 397 WKYMKSKQFVPSLHTFSVLINGLCAKGNAMKACILLEEMIEKGI 440
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-GEWGCYPNETTFVVLIRSLYQAA 171
MD P+N+ FN L++ LCK R A ++F M G + P+ T+ +L+ +
Sbjct: 157 MDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIFDSMKGRFE--PDSKTYSILLEGWGKEP 214
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
L + E+ M SAG + D Y + ILC RV+ A++V M + C P
Sbjct: 215 NLPKAREVFGEMVSAG--CNPDIVTYGIMVDILCKAGRVDEAVEVVKEMDDNDCRPTSFI 272
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
Y +L+ G +R++ A +F E + G+A
Sbjct: 273 YSVLVHTYGVESRIEDAIDMFMEMEKNGIA 302
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NVETF +++ + K ++A+ F+ M ++ N F L+ +L ++ + + E+
Sbjct: 130 NVETFCIIMRKYARAHKVDEAVYTFNVMDKYDTPQNLAAFNGLLSALCKSRNVRKAQEIF 189
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
D MK D K Y L + A +VF M + GC P I TY +++ L
Sbjct: 190 DSMKGR---FEPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILC 246
Query: 241 AHNRVDKANALFHEAQSRGLAVTPKEYAV 269
RVD+A + E T Y+V
Sbjct: 247 KAGRVDEAVEVVKEMDDNDCRPTSFIYSV 275
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 126/291 (43%), Gaps = 41/291 (14%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ C + A++ +++ + + P+ + LI G C +GKLEEA L +M
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + +V YNA+++ C++K + EA KVL ++ + + NV TFN +I
Sbjct: 335 VGLGLKPNIVTYNALIN---GFCKKK----MMKEATKVLDDVSKQELVPNVITFNTMIDA 387
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF--- 188
CK E+ L M E G PN +T+ LI L + L+ E+++ M++ G
Sbjct: 388 YCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGD 447
Query: 189 ------------------------------GASLDKKAYYQFLTILCGIERVEHALKVFA 218
G + Y + C +++ AL V
Sbjct: 448 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRK 507
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M+ + +P + TY++L+ N+++ AN L +E +GL Y +
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + + ++ C K A +++ D+++ + P+ + +I +C +G +EE
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L M G V Y + + LCR++D A+++L EM+ +G+ +V T
Sbjct: 398 FSLCSSMLEEGILPNVSTYKCL---IAGLCRKQD----LQAAKELLNEMENKGLKGDVVT 450
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI LCK K+ +A KL + M G PN T+ L+ +L+ + RM+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRKRME 510
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++ Y + C I ++E A + M G P TYD++
Sbjct: 511 KERKQPNV--VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWC---VDGKLE 62
+ + + + + LC G + AE ++D+ A I P + L+ G+C GK+
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPKVVTYNTLVDGYCKRGSAGKMY 255
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A EM V +N ++D C KD + + A+K EM +G+ N+
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFC-----KDENV--AAAKKAFEEMQKQGLKPNI 308
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI LC K E+A+ L+ +M G PN T+ LI + ++E +++D
Sbjct: 309 VTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVLDD 368
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ ++ + + C +E + + M +G P + TY L++ L
Sbjct: 369 VSKQELVPNV--ITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPNVSTYKCLIAGLCRK 426
Query: 243 NRVDKANALFHEAQSRGL 260
+ A L +E +++GL
Sbjct: 427 QDLQAAKELLNEMENKGL 444
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 18/220 (8%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
+ DML+ + + +L A GF+L + N +L + + + D
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSQTSCNPLLSALVKENKIGD-------V 184
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLC---KIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
E V EM R + N+ TFN+ I LC K+ K EDA++ M WG P T+ L
Sbjct: 185 EYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE---DMKAWGISPKVVTYNTL 241
Query: 164 IRSLYQ---AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+ + A ++ + + + M + ++ + + C E V A K F M
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICP--NEVTFNTLIDGFCKDENVAAAKKAFEEM 299
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ G +P I TY+ L++ L + ++++A L+ + GL
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL 78
+KL + + Y+E + K ++ P + LI G+C+ G+ +EA L EM
Sbjct: 215 DKLVNDAYELYSEMITKRIS----PTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINP 270
Query: 79 GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV-------------------- 118
V +N ++D +C+ + K EA+ + M GV
Sbjct: 271 DVYTFNILVDALCKEGKIK-------EAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYIIS 323
Query: 119 ----PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
N +++++I CKI+ + AL LF+ M P+ T+ LI L ++ R+
Sbjct: 324 RMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRIS 383
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
E++D M+ +G A D Y + LC V+ A+ + +K G + + TY++
Sbjct: 384 YAWELVDEMRDSGQPA--DIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNI 441
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
L+ L R+ A +F + +G +T Y +
Sbjct: 442 LIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTI 476
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++I G+C +++A L EM V YN+++D +C+ R
Sbjct: 329 PNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI------ 382
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
S A +++ EM G P ++ T+N LI LCK + A+ L ++ + G + T+ +
Sbjct: 383 -SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNI 441
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI L + RL++ + + G+ +L Y + LC + A + + M+
Sbjct: 442 LIDGLCKQGRLKDAQVIFQDLLIKGY--NLTVWTYTIMINGLCLEGLLNEAETLLSKMED 499
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+GC P T + ++ L +++ ++A L E +RGL
Sbjct: 500 NGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 537
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 115/281 (40%), Gaps = 34/281 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + SL +++ C G +A + + ++ + P+ L+KG+C++ K++EA
Sbjct: 92 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 151
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF V+Y +++ +C++ + + + E LV D V
Sbjct: 152 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTD-------VVM 204
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I LCK + DA +L+ M P T LI + +E ++ M
Sbjct: 205 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 264
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS------- 237
D + + LC +++ A A+M +G P + TY LM
Sbjct: 265 LKNINP--DVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLYII 322
Query: 238 ---KLGAHNR--------------VDKANALFHEAQSRGLA 261
++ + R VDKA +LF+E + R +A
Sbjct: 323 SRMRVAPNARSYSIVINGFCKIKMVDKALSLFYEMRCRRIA 363
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLA 68
D + +++ LC G SYA +V ++ P + + + LI C + +++A L
Sbjct: 365 DTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALV 424
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
++ G +L + YN ++D +C+ R KD A+ + ++ +G V T+ ++
Sbjct: 425 KKIKDQGIQLDMYTYNILIDGLCKQGRLKD-------AQVIFQDLLIKGYNLTVWTYTIM 477
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I LC +A L +M + GC P+ T +IR+L++ + E ++++ M + G
Sbjct: 478 INGLCLEGLLNEAETLLSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIARGL 537
>Medtr5g095130.1 | PPR containing plant-like protein | HC |
chr5:41578336-41574902 | 20130731
Length = 906
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL D S +++ L GF+ ++ ++ + + D + +I G+C GK+++A
Sbjct: 582 GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM G + VV Y +++D + ++ R + ++L EA+ + GV NV
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSI-------GVDLNVVI 694
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ LI K+ + ++A + + + G PN T+ L+ +L +A ++E MK
Sbjct: 695 YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMK 754
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ S + Y + LC I + A + M+ G +P TY +++ L
Sbjct: 755 N--LKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812
Query: 245 VDKANALFHEAQSRG 259
V +A LF ++ G
Sbjct: 813 VMEARGLFDRFKASG 827
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 9/223 (4%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
A+ + PD +LI G G E +L EM G L V+AYN ++D C+ +
Sbjct: 580 AQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKV- 638
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
+A ++L EM +G+ V T+ ++ L KI + ++A LF G N
Sbjct: 639 ------DKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF 217
+ LI + R++E +++ + G + + + L L E ++ A F
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGL--TPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
MK C P TY ++++ L + +KA + E Q +GL
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 10/267 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
++ GL + ++ +++++LC A + L +V PD LI G G++
Sbjct: 439 KEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRV 498
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++A L +M VV Y +++ + R++D K+ EM +RG +
Sbjct: 499 DDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKED-------GHKIYKEMVHRGCSPD 551
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+ N + + K + E LF + G P+ ++ +LI L +A E ++
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
MK G LD AY + C +V+ A ++ MK G +P + TY ++ L
Sbjct: 612 EMKEQGL--HLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK 669
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYA 268
+R+D+A LF EA+S G+ + Y+
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYS 696
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 29/248 (11%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE--- 105
+ +I G+ GK +EA L R G V+AYN +L C+ + ++ +H E
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406
Query: 106 ------------------------AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
A KV M G+ N+ T N++I LCK +K ++A
Sbjct: 407 DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEA 466
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+F + C P+ TF LI L + R+++ + ++M + ++ Y +
Sbjct: 467 CSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNV--VVYTSLI 524
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
R E K++ M GC P + + M + V+K ALF E +++GL
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584
Query: 262 VTPKEYAV 269
+ Y++
Sbjct: 585 PDVRSYSI 592
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 107/237 (45%), Gaps = 9/237 (3%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
KG A R+ ++ + P+ ++LI C G+LE A ++ M G ++
Sbjct: 391 KGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
N M+D +C+ QK EA + + +D++ + TF LI L + + +DA
Sbjct: 451 NIMIDRLCK--AQK-----LDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYS 503
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
L+ +M + PN + LI++ ++ R E+G ++ M G S D ++
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHR--GCSPDLMLLNSYMDC 561
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ VE +F +KA G P +++Y +L+ L + LF+E + +GL
Sbjct: 562 VFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGL 618
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 107/230 (46%), Gaps = 17/230 (7%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
P+ + LI+ + G+ E+ ++ EM G ++ N+ +DCV +
Sbjct: 514 IPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFK--------- 564
Query: 102 LHSEAEK---VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
E EK + E+ +G+ +V ++++LI L K + + KLF+ M E G + +
Sbjct: 565 -AGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL 623
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
+ +I ++ ++++ ++++ MK+ G ++ Y + L I+R++ A +F
Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTV--VTYGSVVDGLAKIDRLDEAYMLFE 681
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
K+ G + + Y L+ G R+D+A + E +GL TP Y
Sbjct: 682 EAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL--TPNSYT 729
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 110/275 (40%), Gaps = 31/275 (11%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
++ GL D + V++ C G A ++++++ + + P ++ G +L
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH------------------ 103
+EA L E G +L VV Y++++D ++ R + +L+
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733
Query: 104 ----------SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC 153
EA+ M N T++++I LC IRK A + M + G
Sbjct: 734 LDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGL 793
Query: 154 YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHA 213
PN T+ +I L +A + E + DR K++ G D Y + L + A
Sbjct: 794 KPNNITYTTMIAGLAKAGNVMEARGLFDRFKAS--GGVPDSACYNAMIEGLSSANKAMDA 851
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
VF + GC KT +L+ L + +++A
Sbjct: 852 YIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 10/189 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L++ + +G+++ A L EM F +V YN +DC ++ + A K
Sbjct: 244 LVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKV-------DMAWKFF 296
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM +G+ + T+ LI LCK R+ ++A++LF + P + +I A
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSA 356
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+ +E +++R K G S+ AY LT L +VE AL++ M+ D P +
Sbjct: 357 GKFDEAYSLLERQKRKGCIPSV--IAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLT 413
Query: 231 TYDLLMSKL 239
TY++L+ L
Sbjct: 414 TYNILIDML 422
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 49 DMLIKGWCVD-----GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D+++ C+D GK++ A + EM G V Y ++ +C+ R+ D
Sbjct: 272 DLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCK-ARRLD----- 325
Query: 104 SEAEKVLVEMDY-RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA ++ E+D R VP V +N +I K ++A L R GC P+ +
Sbjct: 326 -EAVELFEELDLNRSVP-CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
++ L + ++EE + D M+ A+ + Y + +LC +E ALKV MK
Sbjct: 384 ILTCLGRKGKVEEALRIHDEMRQ---DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE 440
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
G P I T ++++ +L ++D+A ++F
Sbjct: 441 AGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI L + + L LFH+M E G N F L+R + R++ ++D MK
Sbjct: 206 YTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMK 265
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S F A L Y + + +V+ A K F MKA G P TY L+ L R
Sbjct: 266 SNSFTADL--VLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARR 323
Query: 245 VDKANALFHE 254
+D+A LF E
Sbjct: 324 LDEAVELFEE 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
A +L EM ++ +NV I K+ K + A K FH M G P++ T+ LI
Sbjct: 257 ALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIG 316
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKA--YYQFLTILCG---IERVEHALKVFAMM 220
L +A RL+E E+ + + L++ Y + T++ G + + A +
Sbjct: 317 VLCKARRLDEAVELFEEL-------DLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQ 369
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKA 248
K GC P + Y+ +++ LG +V++A
Sbjct: 370 KRKGCIPSVIAYNCILTCLGRKGKVEEA 397
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + ++ K C G + AER VK + + + P + LI G+ +
Sbjct: 387 GLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRC 446
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ E+ G + V +Y ++++C+C KD LL +AE VL +M RGV N +
Sbjct: 447 FEIFEEIENKGMKPNVKSYGSLINCLC-----KDGKLL--DAEIVLGDMVTRGVSPNADI 499
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI C + K +DA + + M + G T+ LI + + R+ E + + M
Sbjct: 500 YNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGRVTEAENLFLHMT 559
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
G+ D Y +++ E L+++ MK G +P I T+ L++
Sbjct: 560 RKGYKP--DVITYNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLIN 610
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 128/300 (42%), Gaps = 45/300 (15%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDG 59
ME+D G++ +V+ LC A ++ + + R + P+ + LI G+C G
Sbjct: 180 MEKD-GIRPTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVG 238
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-V 118
++EA RL M + VV YN +L +C L R +D A++VL+EM+ +G +
Sbjct: 239 GIDEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLED-------AKRVLLEMERKGFL 291
Query: 119 PRNVE---------------------------TFNVLITNLCKIRKTEDALKLFHRMGEW 151
PR T N L+ LCK+ K E A ++ ++
Sbjct: 292 PRGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESN 351
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL---CGIE 208
G P+ ++ +L+ + Q L +G + M+ G K +Y F T++ C
Sbjct: 352 GVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGL-----KPSYVTFNTLINKFCETG 406
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ A + M G P ++TY+ L++ G + +F E +++G+ K Y
Sbjct: 407 DLNQAERWVKKMIEKGVSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYG 466
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 112/255 (43%), Gaps = 10/255 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G + D + ++ LC G A+ ++ L + + P ++L+ +C G L +
Sbjct: 317 GTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNAYCQKGDLNKG 376
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
A EM + G + V +N +++ CE ++AE+ + +M +GV +ET
Sbjct: 377 ILTAEEMEKRGLKPSYVTFNTLINKFCETGDL-------NQAERWVKKMIEKGVSPTLET 429
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI ++F + G PN ++ LI L + +L + + ++ M
Sbjct: 430 YNSLINGYGMTCDFVRCFEIFEEIENKGMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMV 489
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+ G + D Y + C + + + A + M +G + I TY+ L++ +G + R
Sbjct: 490 TRGVSPNAD--IYNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLINGIGKNGR 547
Query: 245 VDKANALFHEAQSRG 259
V +A LF +G
Sbjct: 548 VTEAENLFLHMTRKG 562
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 15/267 (5%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + S ++ LC G AE ++ D+ R + P+ + +MLI+ C K ++A
Sbjct: 457 GMKPNVKSYGSLINCLCKDGKLLDAEIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDA 516
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R EM + G + +V YN +++ + + R +EAE + + M +G +V T
Sbjct: 517 FRFLNEMIQNGIDATIVTYNTLINGIGKNGRV-------TEAENLFLHMTRKGYKPDVIT 569
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L++ E L+L+ M + G P+ TF LI S + +G +++M
Sbjct: 570 YNSLMSVYAMSGNPEKCLELYDNMKKRGIKPSIGTFHPLINSCRK-----KGVVTMEKMF 624
Query: 185 SAGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
G L D+ Y + + V A+ + M G + TY+ L+
Sbjct: 625 QEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAMSLHQQMVDQGIDSDKVTYNCLILAHLRD 684
Query: 243 NRVDKANALFHEAQSRGLAVTPKEYAV 269
RV + + + +++GL Y +
Sbjct: 685 QRVSEIKHILDDMKAKGLVPKADTYKI 711
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 91/226 (40%), Gaps = 33/226 (14%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L + L M + G YN +L +C+ + KD A KV EM R V
Sbjct: 170 LNKCFELINLMEKDGIRPTTYVYNLVLGGLCKAKKIKD-------ARKVFDEMIQRNVVP 222
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N TFN LI CK+ ++A +L RM N T+ L+ L RLE+ ++
Sbjct: 223 NTVTFNTLIDGYCKVGGIDEAFRLRARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVL 282
Query: 181 DRMKSAGF--------------------------GASLDKKAYYQFLTILCGIERVEHAL 214
M+ GF G +D+ L LC + +VE A
Sbjct: 283 LEMERKGFLPRGFSSLVFDDQLMSGNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAK 342
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
++ A ++++G P +Y++L++ ++K E + RGL
Sbjct: 343 EILAKLESNGVVPSPVSYNILVNAYCQKGDLNKGILTAEEMEKRGL 388
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 7/180 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G+K G+ ++ KG + + + L + PD A+ + +I G+ DG + +A
Sbjct: 597 GIKPSIGTFHPLINSCRKKGVVTMEKMFQEMLGMKLIPDRAVYNEMIYGYAEDGNVLKAM 656
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L +M G + V YN ++ L +D + SE + +L +M +G+ +T+
Sbjct: 657 SLHQQMVDQGIDSDKVTYNCLI-----LAHLRDQRV--SEIKHILDDMKAKGLVPKADTY 709
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
+L+ C ++ A + M + G N+ LI L + L E + + + S
Sbjct: 710 KILVKGHCDLKDFNGAYFWYREMFDSGFILNDCICSQLISGLREEEMLHEAEIVSSELTS 769
>Medtr5g007250.1 | PPR containing plant-like protein | HC |
chr5:1257943-1262153 | 20130731
Length = 1084
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 118/280 (42%), Gaps = 22/280 (7%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLE 62
D G+ ++ ++ LC G A +++ ++ + PD++ +I C K+E
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVE 477
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A L EM R G V Y ++D C+ L +A K EM ++G NV
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAG-------LIQQARKWFDEMLHKGCTPNV 530
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+ LI K ++ A +LF M GC PN T+ LI +A ++E+ ++ R
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590
Query: 183 MKSAGFGASLDKK--------------AYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
M+ + +DK Y + LC RV+ A ++ M A GCEP
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
YD ++ ++ A +F + RG + Y+
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYS 690
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL-----------------GVVAYNA 85
P+ LI G C G++E+A ++ M RG E V+ Y A
Sbjct: 563 PNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGPNVITYGA 621
Query: 86 MLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
++D +C+ R K EA ++L M G N ++ +I CKI K +DA ++F
Sbjct: 622 LVDGLCKANRVK-------EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
+M E G PN T+ I L++ RL+ +++ +M + + Y + + LC
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENS--CTPNVVIYTEMVDGLC 732
Query: 206 GIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
I + + A K+ M+ GC P + TY ++ G ++++ LF + S+G A
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792
Query: 266 EYAV 269
Y V
Sbjct: 793 TYRV 796
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 107/270 (39%), Gaps = 14/270 (5%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
Y DR +L LC G A ++ D A PD + ++ G C EEA
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLI-DEAEDFVPDTVFYNRMVSGLCEASLFEEA 298
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ M VV Y +L C +K +++L M G N E
Sbjct: 299 MDILHRMRSSSCIPNVVTYRILLSG----CLRKGQL---GRCKRILSMMITEGCYPNREI 351
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI CK R A KLF +M + GC P + + I S+ D ++D ++
Sbjct: 352 FNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSD-ILDLVE 410
Query: 185 SA-----GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
A G L+K F LCG + + A K+ M G P TY ++ L
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++V+KA +LF E + G+ + Y +
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTI 500
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 45/239 (18%)
Query: 17 VVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+V+ LC A ++ LA P++ + D +I G+C GKL++A+ + +M G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ + Y++ +DC+ + R D L KVL +M NV + ++ LCKI
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRL-DLVL------KVLSKMLENSCTPNVVIYTEMVDGLCKI 734
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
KT++A KL +M E GC PN T+ MID GFG S
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTA----------------MID-----GFGKS---- 769
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
++E L++F M + GC P TY +L++ ++ +D+A L E
Sbjct: 770 ------------GKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 14/255 (5%)
Query: 16 VVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++++ C G A + + L + P+ LI + ++ A L M
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLH---------SEAEKVLVEMDYRGVP-RNVET 124
G + VV Y A++D C+ + + ++ S+ +K ++D+ NV T
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYF-KLDHNNCEGPNVIT 618
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ L+ LCK + ++A +L M GC PN+ + +I + +L++ E+ +M
Sbjct: 619 YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G+ +L Y F+ L R++ LKV + M + C P + Y ++ L +
Sbjct: 679 ERGYSPNL--YTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGK 736
Query: 245 VDKANALFHEAQSRG 259
D+A L + + +G
Sbjct: 737 TDEAYKLMLKMEEKG 751
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 123/279 (44%), Gaps = 34/279 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL--ARVIFPDEAMCDMLIKGWCVDGKLEE 63
G++ + S +V++ LC A R++ DL + ++PD L+ G+C GK+ E
Sbjct: 358 GIEPNIYSYNIVMDGLCRNHMMLDARRLM-DLMVSNGVYPDTVTYTTLLHGYCSKGKVFE 416
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A+ + EM R G N +L+ + + R+ SEAE++L +M+ + +
Sbjct: 417 AKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRK-------SEAEEMLQKMNEKSYQLDTV 469
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGC----------------------YPNETTFV 161
T N+++ LC+ + E A ++ M G P+ T+
Sbjct: 470 TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYT 529
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI L + +LEE + M + D Y F+ C ++ AL+V M+
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEMMAKNLHP--DSVTYDTFVLNFCKQGKISSALRVLKDME 587
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+GC ++TY+ L+ LG+ ++ + L E + RG+
Sbjct: 588 RNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGI 626
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 18/240 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + ++++ LC +A + ++ + P++ +L++G+C G+ ++A
Sbjct: 146 GVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQA 205
Query: 65 RRLA-GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
G+M G + V YN + V C+Q ++ EAEK++ M +G+ +V
Sbjct: 206 LEFVDGKM---GGNVNRVVYNTL---VSSFCKQD----MNDEAEKLVERMTEKGLLPDVV 255
Query: 124 TFNVLITNLCKIRKTEDALKLFHRM---GEWGC-YPNETTFVVLIRSLYQAARLEEGDEM 179
TFN I+ LC+ K +A ++F M GE G PN TF ++++ Q +EE +
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
++ MK G SL+ +Y +L L ++ V M +G EP I +Y+++M L
Sbjct: 316 VETMKKGGNFVSLE--SYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGL 373
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 125/317 (39%), Gaps = 71/317 (22%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-----VIFPDEAMCDMLIKGWCVDGK 60
GL D + + LC G A R+ +D+ + P+ ++++KG+C +G
Sbjct: 249 GLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGM 308
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+EEAR L M +GG + + +YN L L ++ LL E VL EM G+
Sbjct: 309 MEEARSLVETMKKGGNFVSLESYNTWL-----LGLLRNGKLL--EGRSVLDEMVENGIEP 361
Query: 121 NVETFNVLITNLCKIRKTEDALKL-----------------------------------F 145
N+ ++N+++ LC+ DA +L
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAIL 421
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC 205
+ M GC+PN T L+ SL++ R E +EM+ +M + LD + LC
Sbjct: 422 NEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSY--QLDTVTCNIVVNGLC 479
Query: 206 GIERVEHALKVFAMMKADGCE----------------------PGIKTYDLLMSKLGAHN 243
+E A +V + M DG P + TY L++ L
Sbjct: 480 RNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVG 539
Query: 244 RVDKANALFHEAQSRGL 260
++++A F E ++ L
Sbjct: 540 KLEEAKKKFIEMMAKNL 556
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+M GV TFN+LI +LC+ + A +LF +M E GC PN+ T +L+R +A
Sbjct: 140 TDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRA 199
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
R ++ E +D G ++++ Y ++ C + + A K+ M G P +
Sbjct: 200 GRTKQALEFVD----GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
T++ +S L +V +A+ +F + Q G PK V
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVV 294
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 33/246 (13%)
Query: 15 KVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
++ L +G S AE M++ + + D C++++ G C +G+LE+A + EM+
Sbjct: 437 NTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWT 496
Query: 74 GGFE-LG---------------------VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
G LG V+ Y +++ +C++ + + EA+K +
Sbjct: 497 DGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLE-------EAKKKFI 549
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
EM + + + T++ + N CK K AL++ M GC T+ LI L
Sbjct: 550 EMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKG 609
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIK 230
++ E ++D M+ G D Y + LC + + A + M G P +
Sbjct: 610 QIFEMYGLMDEMRERGIHP--DICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVS 667
Query: 231 TYDLLM 236
++ +L+
Sbjct: 668 SFKILI 673
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + + ++ C K A ++ D+++ + P+ + +I +C +G +EE
Sbjct: 338 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 397
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L M G V YN + + LCR++D A+++L EM+ +G+ +V T
Sbjct: 398 FSLCSSMLDEGILPNVSTYNCL---IAGLCRKQD----LQAAKELLNEMENKGLKGDVVT 450
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI LCK K+ +A KL + M G PN T+ L+ +L+ + RM+
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++ Y + C I ++E A + M G P TYD++
Sbjct: 511 KERKQPNV--VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ C + A++ +++ + + P+ + LI G C +GKLEEA L +M
Sbjct: 275 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + +V YNA+++ C++K + EA KV ++ + + NV TFN +I
Sbjct: 335 VGLGLKPNIVTYNALIN---GFCKKK----MMKEATKVFDDVSKQELVPNVITFNTMIDA 387
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF--- 188
CK E+ L M + G PN +T+ LI L + L+ E+++ M++ G
Sbjct: 388 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD 447
Query: 189 ------------------------------GASLDKKAYYQFLTILCGIERVEHALKVFA 218
G + Y + C +++ AL V
Sbjct: 448 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRT 507
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M+ + +P + TY++L+ N+++ AN L +E +GL Y +
Sbjct: 508 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 558
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWC---VDGKLE 62
+ + + + + LC G + AE ++D+ A I P+ + L+ G+C GK+
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A EM V +N ++D C KD + + A+K EM +G+ N+
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFC-----KDENV--AAAKKAFEEMQKQGLKPNI 308
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI LC K E+A+ L+ +M G PN T+ LI + ++E ++ D
Sbjct: 309 VTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD 368
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ ++ + + C +E + + M +G P + TY+ L++ L
Sbjct: 369 VSKQELVPNV--ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 243 NRVDKANALFHEAQSRGL 260
+ A L +E +++GL
Sbjct: 427 QDLQAAKELLNEMENKGL 444
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 99/235 (42%), Gaps = 7/235 (2%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
+DYG K S ++ L + E + K++ R I + ++ I G C GKL
Sbjct: 157 KDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKL 216
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A +M G VV YN ++D C+ + +AE + EM + N
Sbjct: 217 NKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY----KAEAFMKEMLANKICPN 272
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
TFN LI CK A K F M + G PN T+ LI L +LEE ++ D
Sbjct: 273 EVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWD 332
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+M G G + Y + C + ++ A KVF + P + T++ ++
Sbjct: 333 KM--VGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMI 385
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
+ DML+ + + +L A GF+L + + N +L + + + D
Sbjct: 132 IIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGD-------V 184
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLC---KIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
E V EM R + N+ TFN+ I LC K+ K EDA++ M WG PN T+ L
Sbjct: 185 EYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE---DMKAWGISPNVVTYNTL 241
Query: 164 IRSLYQ---AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+ + A ++ + + + M + ++ + + C E V A K F M
Sbjct: 242 VDGYCKRGSAGKMYKAEAFMKEMLANKICP--NEVTFNTLIDGFCKDENVAAAKKAFEEM 299
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ G +P I TY+ L++ L + ++++A L+ + GL
Sbjct: 300 QKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGL 339
>Medtr2g041700.1 | PPR containing plant-like protein | HC |
chr2:18319616-18321262 | 20130731
Length = 548
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 17/249 (6%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
++ +++ LC G A +++ DL PD + +I G+C +++ AR E+
Sbjct: 215 TINILMRGLCRAGEIDEACKLLGDLRSFGCSPDVITYNTIIHGFCRISEVDRARSFLNEV 274
Query: 72 -YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
G VV+Y ++ C+L R K EA + EM G N TFN LI
Sbjct: 275 CLNGQVAPDVVSYTTIISGYCKLSRMK-------EASSLFDEMIRSGTMPNAFTFNALID 327
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
K+ +L ++H+M GC P+ TF LI + +++ EM + M S A
Sbjct: 328 GFVKLGDMASSLAMYHKMLFRGCNPDVVTFTSLINGYFVVGQVKPALEMWNEMNSRKVAA 387
Query: 191 SLDKKAYYQFLTIL---CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
SL Y F ++ C R+ A + +K P Y+ ++ VD+
Sbjct: 388 SL-----YTFSVLVNGFCKNNRLHEARDILTRLKQSDVVPQSFVYNPVIDGYCKSGNVDE 442
Query: 248 ANALFHEAQ 256
AN + E +
Sbjct: 443 ANKILAEME 451
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 10/231 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + + ++ C K A ++ D+++ + P+ + +I +C +G +EE
Sbjct: 204 GLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEG 263
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L M G V YN + + LCR++D A+++L EM+ +G+ +V T
Sbjct: 264 FSLCSSMLDEGILPNVSTYNCL---IAGLCRKQD----LQAAKELLNEMENKGLKGDVVT 316
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI LCK K+ +A KL + M G PN T+ L+ +L+ + RM+
Sbjct: 317 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 376
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++ Y + C I ++E A + M G P TYD++
Sbjct: 377 KERKQPNV--VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 425
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 41/291 (14%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ +++ C + A++ +++ + + P+ + LI G C +GKLEEA L +M
Sbjct: 141 TFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 200
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
G + +V YNA+++ C++K + EA KV ++ + + NV TFN +I
Sbjct: 201 VGLGLKPNIVTYNALIN---GFCKKK----MMKEATKVFDDVSKQELVPNVITFNTMIDA 253
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF--- 188
CK E+ L M + G PN +T+ LI L + L+ E+++ M++ G
Sbjct: 254 YCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD 313
Query: 189 ------------------------------GASLDKKAYYQFLTILCGIERVEHALKVFA 218
G + Y + C +++ AL V
Sbjct: 314 VVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRT 373
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M+ + +P + TY++L+ N+++ AN L +E +GL Y +
Sbjct: 374 RMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI 424
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 13/258 (5%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWC---VDGKLE 62
+ + + + + LC G + AE ++D+ A I P+ + L+ G+C GK+
Sbjct: 62 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 121
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A EM V +N ++D C KD + + A+K EM +G+ N+
Sbjct: 122 KAEAFMKEMLANKICPNEVTFNTLIDGFC-----KDENV--AAAKKAFEEMQKQGLKPNI 174
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N LI LC K E+A+ L+ +M G PN T+ LI + ++E ++ D
Sbjct: 175 VTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDD 234
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
+ ++ + + C +E + + M +G P + TY+ L++ L
Sbjct: 235 VSKQELVPNV--ITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 292
Query: 243 NRVDKANALFHEAQSRGL 260
+ A L +E +++GL
Sbjct: 293 QDLQAAKELLNEMENKGL 310
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC- 133
GF+L + + N +L + + + D E V EM R + N+ TFN+ I LC
Sbjct: 26 GFKLSLTSCNPLLSALVKENKIGD-------VEYVYKEMIKRRIHTNLNTFNIFINGLCR 78
Query: 134 --KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ---AARLEEGDEMIDRMKSAGF 188
K+ K EDA++ M WG PN T+ L+ + A ++ + + + M +
Sbjct: 79 AGKLNKAEDAIE---DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKI 135
Query: 189 GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
++ + + C E V A K F M+ G +P I TY+ L++ L + ++++A
Sbjct: 136 CP--NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEA 193
Query: 249 NALFHEAQSRGL 260
L+ + GL
Sbjct: 194 IDLWDKMVGLGL 205
>Medtr6g080130.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30127216-30126608 | 20130731
Length = 202
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G+C ++ EA L EM VV Y++++D C+ + S A ++
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKI-------SHALNLV 53
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM RG P ++ +N ++ LCK + + A+ L + G P+ T+ +LI L +
Sbjct: 54 NEMHDRGQPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKG 113
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
RLE+ + + G+ +++ Y + LC + + AL + MK + C P +
Sbjct: 114 ERLEDARNIFKDLLVKGYNITVN--TYTDMIHGLCNMGLFDEALALLLEMKDNSCIPNVV 171
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY++++ L + DKA + E +R L
Sbjct: 172 TYEIIIRSLFDKDENDKAEKIIREMITRDL 201
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+I CKI++ +A+ LF M P+ T+ LI ++ ++ +++ M G
Sbjct: 1 MINGFCKIKRVGEAINLFEEMQCKKIIPDVVTYSSLIDGFCKSEKISHALNLVNEMHDRG 60
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D Y L LC +V+ A+ + K G +P + TY +L+ L R++
Sbjct: 61 --QPPDIIIYNSILDALCKNHQVDKAIALLTKFKNQGIQPSVYTYTILIDGLCKGERLED 118
Query: 248 ANALFHEAQSRGLAVTPKEYA 268
A +F + +G +T Y
Sbjct: 119 ARNIFKDLLVKGYNITVNTYT 139
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 10/248 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEAR 65
+ D + ++ LC + A + ++ + + P+ LI G C GK++ A
Sbjct: 292 ISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLAL 351
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
R M G ++ YNA+++ LCR D EA K+L EM G + TF
Sbjct: 352 RNFEIMKDRGIRPDLITYNALIN---GLCRDGDL----KEARKLLNEMIGNGFKPDKITF 404
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
L+ CK + AL++ RM E G ++ F LI L + R+ + + M+ M S
Sbjct: 405 TTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLS 464
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
AG D Y + C V+ K+ M+ DG PG+ TY+ LM+ ++
Sbjct: 465 AGHKP--DDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQM 522
Query: 246 DKANALFH 253
A L H
Sbjct: 523 KNAKMLLH 530
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 10/257 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
DYG + +++ C G A + +++R + P + LI G+C +E
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
E L M V Y+A+++ +C+ R + EA + EM G+ N
Sbjct: 279 EGFVLKSVMESERISPDVFTYSALINGLCKESRVE-------EANGLFDEMCEMGLVPNG 331
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
TF LI CK K + AL+ F M + G P+ T+ LI L + L+E ++++
Sbjct: 332 VTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNE 391
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M GF DK + + C ++ AL++ M +G E + L+S L
Sbjct: 392 MIGNGFKP--DKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRD 449
Query: 243 NRVDKANALFHEAQSRG 259
RV A + + S G
Sbjct: 450 GRVRDAERMLKDMLSAG 466
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G K D+ + +++ C G A +RMV++ + D+ LI G C DG++
Sbjct: 396 GFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIEL---DDVAFTALISGLCRDGRV 452
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+A R+ +M G + Y ++DC C+ K K+L EM G
Sbjct: 453 RDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVK-------MGAKLLKEMQRDGRVPG 505
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
V T+N L+ CK + ++A L H M PN+ TF +L+
Sbjct: 506 VVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILL 548
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 8/212 (3%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
D LI + +E+A + + + F + V + +L V +L +Q E
Sbjct: 159 DALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPG-----HCWEF 213
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
L +DY G P NV FN+L+ CKI +A +F + G P+ +F LI
Sbjct: 214 YLEVLDY-GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
++ +EEG + M+S S D Y + LC RVE A +F M G P
Sbjct: 273 RSKNVEEGFVLKSVMESERI--SPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPN 330
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
T+ L+ H ++D A F + RG+
Sbjct: 331 GVTFTTLIDGQCKHGKIDLALRNFEIMKDRGI 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKL 61
+D G++ D + ++ LC G A +++ ++ F PD+ L+ G C DG +
Sbjct: 358 KDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDM 417
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ A + M G EL VA+ A++ +C R +D AE++L +M G +
Sbjct: 418 DSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRD-------AERMLKDMLSAGHKPD 470
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+ ++I CK + KL M G P T+ L+ + +++ ++
Sbjct: 471 DPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLH 530
Query: 182 RM 183
M
Sbjct: 531 AM 532
>Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:5845943-5843116 | 20130731
Length = 790
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G++R + V+ G A R++ + + + PD ++C+ I KLE+A
Sbjct: 227 GIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKA 286
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R M G E +V+YN ++ C++ R D A +++ EM ++G P + +
Sbjct: 287 LRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDD-------ALELIAEMPFKGCPPDKVS 339
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGE-WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ ++ LCK RK E+ +L M + P++ T+ LI +L + ++ +
Sbjct: 340 YYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREA 399
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ GF +DK Y + C + ++ A + M + GC P + TY ++
Sbjct: 400 EEKGF--HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVG 457
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
++D+A + + G Y V
Sbjct: 458 KIDEAKKMLQQMYKHGCKPNTVTYTV 483
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 11/270 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ VV+ C A+ +V D+ ++ PD +I G+C GK++EA
Sbjct: 403 GFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEA 462
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+++ +MY+ G + V Y +L+ +C + + E + V ++ P N T
Sbjct: 463 KKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEA------REMINVSEEHWWTP-NAIT 515
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ ++ L + K +A L M E G PN +LI+SL + + + ++
Sbjct: 516 YSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECL 575
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G +++ + + C I ++ AL + M P TY L LG +R
Sbjct: 576 HKG--CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSR 633
Query: 245 VDKANALFHEAQSRGLAVTPKEY-AVDPRY 273
+D+A+ L + +G+ TP Y AV R+
Sbjct: 634 LDEASELIVKMLGKGIDPTPVTYRAVIHRF 663
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV--IFPDEAMCDMLIKGWCVDGKLEE 63
G D+ S V+ LC +R+++++ + + PD+ + LI G ++
Sbjct: 332 GCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADD 391
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A E GF + V Y+A++D C+ K+ +A+ ++++M +G +V
Sbjct: 392 ALVFLREAEEKGFHIDKVGYSAVVD---SFCKNKNI----DKAKSLVIDMYSKGCNPDVV 444
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+ +I C++ K ++A K+ +M + GC PN T+ VL+ L + E EMI+
Sbjct: 445 TYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVS 504
Query: 184 KSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+ + + + ++ G+ R + A + M G P +LL+ L
Sbjct: 505 EEHWWTPNA-----ITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLC 559
Query: 241 AHNRVDKANALFHEAQSRGLAVT 263
+ V A E +G AV
Sbjct: 560 RNQNVVGAKKYLEECLHKGCAVN 582
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 12/236 (5%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEE 63
+G K + + V++ LC G + A M+ + P+ ++ G +GKL E
Sbjct: 472 HGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSE 531
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L EM GF V N ++ LCR ++ A+K L E ++G NV
Sbjct: 532 ACDLTREMIEKGFLPNPVDINLLIQ---SLCRNQNVV----GAKKYLEECLHKGCAVNVV 584
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
F +I C+I + AL + M +P+ T+ L +L + +RL+E E+I +M
Sbjct: 585 NFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKM 644
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
G + Y + C RV+ +K+ M A +P Y+ ++ KL
Sbjct: 645 LGKGIDPT--PVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKL 696
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 81 VAYNAMLDCVCE--LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
+ Y MLD + + LC+ A ++L M RG+ R+ E F+ ++ + +
Sbjct: 198 IVYYTMLDILSKTRLCQG---------ARRILRLMTRRGIERSPEAFSYVMVSYSRAGML 248
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
+AL++ M + G P+ + I L + +LE+ ++RMK AG D +Y
Sbjct: 249 RNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEP--DIVSYN 306
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+ C + R++ AL++ A M GC P +Y +M+ L +V++ L
Sbjct: 307 CLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRL 359
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 121/305 (39%), Gaps = 45/305 (14%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
+E D L D V+V+ C G A R+ ++ RV + + +C+ LIKG+C G
Sbjct: 322 VEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLG 381
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
++ EA R+ M + +YN +LD C + F+L E M G+
Sbjct: 382 QVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEE-------MLGDGIT 434
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT-------------------- 159
V T+N +I L + +DAL L+H M E G PNE +
Sbjct: 435 PTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMML 494
Query: 160 ---------------FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL 204
F +I L + +L E + DRMK G S D+ Y
Sbjct: 495 WKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGL--SPDEITYRTLSDGY 552
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
C V+ A ++ +M+ I+ Y+ L+ L +++ L E Q+RGL+
Sbjct: 553 CKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV 612
Query: 265 KEYAV 269
Y
Sbjct: 613 VTYGT 617
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 33/289 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GLK + +++ C G AER+ + + PD + L+ G+C +GK+ +A
Sbjct: 362 GLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKA 421
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCEL-------------------------CRQKDP 99
L EM G VV YN ++ + ++ C D
Sbjct: 422 FMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDC 481
Query: 100 FLLHSEAEKVLV---EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
F ++++ ++ E+ RG ++ FN +I+ LCK+ K +A +F RM E G P+
Sbjct: 482 FFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPD 541
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
E T+ L + ++E ++ M+ AS++ Y + L I ++ +
Sbjct: 542 EITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIE--MYNSLIDGLFKIRKLNDVTDL 599
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
M+ G P + TY L+S ++DKA L+ E RG TP
Sbjct: 600 LVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGF--TPN 646
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 47/292 (16%)
Query: 6 GLKRDRGSLKVVVEKLCSKG----FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKL 61
G + + ++ LC G + +RM K+L + PDE L G+C +G +
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM-KELG--LSPDEITYRTLSDGYCKNGNV 558
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+EA ++ G M R + YN+++D + ++ + D +LVEM RG+ N
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLND-------VTDLLVEMQTRGLSPN 611
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+ LI+ C +K + A L+ M E G PN ++ SLY+ R+ E ++D
Sbjct: 612 VVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILD 671
Query: 182 RM-----------------------KSAGFGASLDKK----------AYYQFLTILCGIE 208
+M ++ SLDK Y + LC
Sbjct: 672 KMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSG 731
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+++ A V +++ + G P TY L+ VD+A L E +GL
Sbjct: 732 KLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 44/291 (15%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
S ++ KL KG A + + I PD MC +++ C G+++ A + +M
Sbjct: 193 SCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKM 252
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ G E VV YN +++ + F E+VL M RGV RNV T +L+
Sbjct: 253 VKEGLEPNVVTYNGLVNGYV----GRGDF---EGVERVLRLMSERGVSRNVVTCTMLMRG 305
Query: 132 LCKIRKTEDALKLFHRMGE-WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
CK K ++A KL + E +E + VL+ Q R+E+ + D M G
Sbjct: 306 YCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKV 365
Query: 191 SL---------------------------------DKKAYYQFLTILCGIERVEHALKVF 217
++ D +Y L C +V A +
Sbjct: 366 NMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLC 425
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
M DG P + TY+ ++ L D A L+H RG VTP E +
Sbjct: 426 EEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERG--VTPNEIS 474
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 107/261 (40%), Gaps = 30/261 (11%)
Query: 30 AERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML-- 87
+ +V+ R + P+ LI GWC + KL++A L EM GF VV + ++
Sbjct: 597 TDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSS 656
Query: 88 ----DCVCELCRQKDPFL-------------------LHSEAEKVLVEMDYRGVPRNVET 124
D + E D L L EA+K+ +D + ++
Sbjct: 657 LYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSN 716
Query: 125 ---FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+N+ I LCK K ++A + + G P+ T+ LI + + ++E ++ D
Sbjct: 717 NIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRD 776
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M G ++ Y + LC + ++ A ++F + G P TY++L+
Sbjct: 777 EMLEKGLIPNI--TIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCR 834
Query: 242 HNRVDKANALFHEAQSRGLAV 262
+DKA+ L + G++
Sbjct: 835 IGDLDKASRLREKMTEEGIST 855
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++ I G C GKL+EAR + + GF Y ++ C + D EA K
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIH-ACSVSGNVD------EAFK 773
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ EM +G+ N+ +N LI LCK+ + A +LF+++ + G PN T+ +LI
Sbjct: 774 LRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833
Query: 169 QAARLEEGDEMIDRMKSAGFGASL 192
+ L++ + ++M G +
Sbjct: 834 RIGDLDKASRLREKMTEEGISTRI 857
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 15 KVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
+ ++ LC G A ++ L +R PD LI V G ++EA +L EM
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
G + YNA+++ +C+L A+++ ++ +G+ N T+N+LI C
Sbjct: 781 KGLIPNITIYNALINGLCKLGNI-------DRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833
Query: 134 KIRKTEDALKLFHRMGEWG 152
+I + A +L +M E G
Sbjct: 834 RIGDLDKASRLREKMTEEG 852
>Medtr8g102710.1 | PPR containing plant-like protein | HC |
chr8:43240632-43242952 | 20130731
Length = 520
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 9/266 (3%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
++G+K + +++ LC K A++ + +LI GW G +
Sbjct: 172 EFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGK 231
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
AR L M G + ++AYN +L+ +C+ EA L +M + V +
Sbjct: 232 ARELFDAMLEQGCHVDLLAYNNLLEALCKGGHV-------DEAMDFLNDMLSKKVEPDAF 284
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+++ I + C A + +M PN T+ +I+ L + ++EE +++D M
Sbjct: 285 TYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEM 344
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
S+G D +Y C V ALK+ + M+ D C P TY++++ L
Sbjct: 345 ISSGLKP--DTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIG 402
Query: 244 RVDKANALFHEAQSRGLAVTPKEYAV 269
R DKA ++ + + Y+V
Sbjct: 403 RFDKATEVWECMGDKKFYPSVSTYSV 428
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 11/231 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D + ++E LC G A + D L++ + PD + I+ +C + A
Sbjct: 243 GCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHSA 302
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M R V YN ++ +C++ + + EA ++L EM G+ + +
Sbjct: 303 FGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVE-------EAYQLLDEMISSGLKPDTWS 355
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N + C + ALKL RM + C+P+ T+ ++++ L + R ++ E+ + M
Sbjct: 356 YNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMG 415
Query: 185 SAGFGASLDKKAYYQFLTILCGIE-RVEHALKVFAMMKADGCEPGIKTYDL 234
F S+ Y + LC + ++E A K FAMM +G P T ++
Sbjct: 416 DKKFYPSV--STYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEM 464
>Medtr8g071970.1 | PPR containing plant-like protein | HC |
chr8:30370460-30375133 | 20130731
Length = 823
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 19/263 (7%)
Query: 8 KRDRGSLKVVVEKLCSK----GFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+R G L +++ LCS+ GF + + ++ +FP C+ L+ +L +
Sbjct: 169 ERSHGELDLLIYILCSQFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHK 228
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
+ R+ M RGG + V Y ++ C+ + EA + ++M GV NV
Sbjct: 229 SFRVFDAMCRGGVLIDVYTYATAINAYCKGGKI-------DEAVGLFLKMGEGGVLPNVV 281
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N LI LCK + E+AL RM E P+ T+ +L+ L + + +E + ++ M
Sbjct: 282 TYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEM 341
Query: 184 KSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
S GF + + F ++ G R ++ AL+V M G +P T++ L+
Sbjct: 342 YSKGFSPN-----EFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFC 396
Query: 241 AHNRVDKANALFHEAQSRGLAVT 263
N++++A + S L+V
Sbjct: 397 RTNQMEQAEQVLEYLLSNVLSVN 419
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 39/260 (15%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD---- 98
P+E + + LI G+ G +++A R+ +M G + V +N +L C + +
Sbjct: 348 PNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQV 407
Query: 99 ----------------PFLLH--------SEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
++LH A K++ + R + N +L+ LCK
Sbjct: 408 LEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCK 467
Query: 135 IRKTEDALKLFHRMGEW-GCYPNETTFVVLIRSLYQAARLEE----GDEMIDRMKSAGFG 189
K +A+ L+ R+ + G N TT L+ L + +EE EM++R G
Sbjct: 468 CGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER------G 521
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
LD +Y + C ++E A K+ M G +P TY+ LM L ++D
Sbjct: 522 LVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVG 581
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
+ HEA+ G+ YA+
Sbjct: 582 RVLHEAKDHGVVPNIYTYAL 601
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 14/224 (6%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+ + LI G C G+LEEA G M +V Y +++ + + F
Sbjct: 276 VLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVK-------F 328
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
EA VLVEM +G N FN LI + +DAL++ M G PN T
Sbjct: 329 EKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTH 388
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L++ + ++E+ +++++ + S + D +Y L +LC + + ALK+ +
Sbjct: 389 NTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKAL 446
Query: 221 KADGCEPGIKTYDLL---MSKLGAHNRVDKANALFHEAQSRGLA 261
+ LL + K G H ++ + F A +GLA
Sbjct: 447 LLRNIKVNDSLLTLLVCGLCKCGKH--LEAIDLWFRLADKKGLA 488
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 9/217 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
+ + L+ G C G +EE + EM G L ++YN ++ C+ + ++ F L
Sbjct: 490 NTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLK 549
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ K +G + T+N L+ L K +D ++ H + G PN T+ ++
Sbjct: 550 EKMMK-------QGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALM 602
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ A R++ + +++ L Y + A K+ M++
Sbjct: 603 LEGYCNADRIDNAVSLFNKLVYN--KVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSS 660
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P I TY ++ + ++ V++A +F E ++ GL
Sbjct: 661 NIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGL 697
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 118/300 (39%), Gaps = 45/300 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + + ++ LC +G + K++ R + D + LI G C GK+EEA
Sbjct: 486 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEA 545
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L +M + GF+ YN ++ + + + D +VL E GV N+ T
Sbjct: 546 FKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD-------VGRVLHEAKDHGVVPNIYT 598
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +++ C + ++A+ LF+++ + + +LI + +A E ++ D M+
Sbjct: 599 YALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMR 658
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI--------------- 229
S+ ++ Y + +C + VE A +F M+ +G P +
Sbjct: 659 SSNIHPTI--FTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQ 716
Query: 230 --------------------KTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
TY +++ +A L +E + G++ Y V
Sbjct: 717 MDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTV 776
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 10/231 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + +++ L KG R++ + + P+ ++++G+C +++ A
Sbjct: 556 GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNA 615
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L ++ EL V YN ++ + +EA K+ M + + T
Sbjct: 616 VSLFNKLVYNKVELSYVVYNILIAAHSKAGN-------FTEAFKLRDAMRSSNIHPTIFT 668
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I +C E+A +F M G PN + LI + ++++ + ++ M
Sbjct: 669 YSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMT 728
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
S +K Y + C + + A K+ M A+G P TY +L
Sbjct: 729 SNCIQP--NKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVL 777
>Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:43095820-43097298 | 20130731
Length = 391
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 52/303 (17%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAM--CDMLIKGWCVDGKLEEARRLAGE 70
+ ++++ +C +G A+ ++ ++ RV FP M C++++ G+C G+L+EA
Sbjct: 60 TYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLKEALSFVWL 119
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS-------------------------- 104
+ + GF L +Y ++++ + R ++ + ++
Sbjct: 120 IKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYAIMIRGLSEEGR 179
Query: 105 --EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA K+L EM+ G+ + +NV+I LC + +A +LF+RM + GC + TF
Sbjct: 180 VGEAGKMLEEMNQIGLTHDAYCYNVVIQGLCDVGMVVEAKELFNRMEKLGCELSIVTFNA 239
Query: 163 LIRSLYQAARLEEGDEMIDRMK-----------SAGF-----GASLDKKAYYQFLTILCG 206
LI L +A LEE + +M S G GASL KK + +C
Sbjct: 240 LINGLCKAKNLEEAMNLFYKMDVGRKYSFRFSLSQGSCQVSDGASLQKK-----VKEMCE 294
Query: 207 IERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKE 266
++ A K+ D I +Y++L++ + A LF E Q +GL+
Sbjct: 295 AGQILKAYKLITDHAGD-LRLDIISYNILINAFCLDREFNAAYNLFEELQKKGLSPDSVT 353
Query: 267 YAV 269
Y
Sbjct: 354 YGT 356
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG-VVAYNAMLDCVCELCRQKDPFL 101
P+ +MLI G C G+++ A+ L EM R GF +++ N +L+ C+ R K
Sbjct: 56 PNFYTYNMLIDGICKRGEVKGAQELLDEMKRVGFPPSDMISCNVVLNGFCKTGRLK---- 111
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
EA + + G N ++ LI K R+ +A + +M E G P+ +
Sbjct: 112 ---EALSFVWLIKKDGFSLNRNSYTSLINGFFKARRYREARVWYTKMFEEGIVPDVVLYA 168
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
++IR L + R+ E +M++ M G + D Y + LC + V A ++F M+
Sbjct: 169 IMIRGLSEEGRVGEAGKMLEEMNQIGL--THDAYCYNVVIQGLCDVGMVVEAKELFNRME 226
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
GCE I T++ L++ L +++A LF++
Sbjct: 227 KLGCELSIVTFNALINGLCKAKNLEEAMNLFYK 259
>Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29897140-29898259 | 20130731
Length = 346
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 112/248 (45%), Gaps = 3/248 (1%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ L G A +++ + +++ + M + +I G C D + +A
Sbjct: 75 GFHLDQVSYGTLINGLGKVGETKEALELLRRVDGKLVQLNAVMYNTVIDGMCKDKHVNDA 134
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM GVV Y+A++ C + + KD EA+ V M + + NV T
Sbjct: 135 FDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMMMKQDIKPNVFT 194
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L+ C +++ A +F+ M + G P+ ++ +LI ++ +E + + M
Sbjct: 195 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILINGFCKSKMTDEAMNLFEEMH 254
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D Y + LC + + +ALK+ M G P I TY +++ L +++
Sbjct: 255 CRKLIP--DVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPNIITYSSILNALCKNHQ 312
Query: 245 VDKANALF 252
VDKA L
Sbjct: 313 VDKAITLL 320
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 19/264 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K S +++ C G S+A ++ + + + PD IK C+ G++ +A
Sbjct: 5 GIKPSFVSCNILINCFCQLGLISFAFSILAKILKNGYEPDTITLTTFIKVLCLKGQIHQA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L V+Y +++ + ++ K EA ++L +D + V N
Sbjct: 65 LHFHDKVIAMGFHLDQVSYGTLINGLGKVGETK-------EALELLRRVDGKLVQLNAVM 117
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I +CK + DA L+ M YP T+ LI +L++ I R+K
Sbjct: 118 YNTVIDGMCKDKHVNDAFDLYSEMVAKRIYPGVVTYSALIIGFCIVGKLKDA---IGRVK 174
Query: 185 SAGFGASLDKK--------AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
A ++ K Y + C ++ V A +F M G P I +Y++L+
Sbjct: 175 EAKNVFAMMMKQDIKPNVFTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIHSYNILI 234
Query: 237 SKLGAHNRVDKANALFHEAQSRGL 260
+ D+A LF E R L
Sbjct: 235 NGFCKSKMTDEAMNLFEEMHCRKL 258
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 19 EKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE-------EARRLAGEM 71
+K + F Y+E +A+ I+P LI G+C+ GKL+ EA+ + M
Sbjct: 128 DKHVNDAFDLYSEM----VAKRIYPGVVTYSALIIGFCIVGKLKDAIGRVKEAKNVFAMM 183
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ + V YN+++D C L ++ + +A+ + M GV ++ ++N+LI
Sbjct: 184 MKQDIKPNVFTYNSLMDGYC-LVKEVN------KAKSIFNTMAQGGVNPDIHSYNILING 236
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
CK + T++A+ LF M P+ T+ LI L + + +++D M G +
Sbjct: 237 FCKSKMTDEAMNLFEEMHCRKLIPDVVTYNSLIDGLCKLGKFSYALKLVDEMHDRGQPPN 296
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+ Y L LC +V+ A+ + +K + + + T LLM
Sbjct: 297 I--ITYSSILNALCKNHQVDKAITLLTKIKDEFSQIFVHTQHLLM 339
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 23 SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
S G ERM D I PDE ++ G C G++EEA G + V
Sbjct: 368 SDGALRLFERMKMD---GIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
Y++++D + + R EAEKV EM +G P + +N LI LCK + +DAL
Sbjct: 425 YSSLIDGLGKAGRV-------DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDAL 477
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
L RM GC TF +LI L++ R EE +M D M G ++ A ++ L+
Sbjct: 478 ALVKRMERDGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNV---ACFRALS 534
Query: 203 I-LCGIERVEHALKVF 217
I LC +V A KV
Sbjct: 535 IGLCLSGKVARACKVL 550
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 10/263 (3%)
Query: 8 KRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWC-VDGKLEEARR 66
K D + +++ C G A MV+++ + + + M + C +G ++
Sbjct: 244 KPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLS 303
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
L EM GFE+ Y+ + +C LC+ E + M G N +
Sbjct: 304 LYHEMEDKGFEVPSHGYSLV---ICGLCKMGKVL----EGYALFENMIRNGCKGNKAVYT 356
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
LI K ++ AL+LF RM G P+E T+ ++ L ++ R+EE
Sbjct: 357 ALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNEN 416
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
G ++ Y + L RV+ A KVF M GC P Y+ L+ L R+D
Sbjct: 417 G--VVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRID 474
Query: 247 KANALFHEAQSRGLAVTPKEYAV 269
A AL + G T + +
Sbjct: 475 DALALVKRMERDGCEQTVYTFTI 497
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 23 SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
S G ERM D I PDE ++ G C G++EEA G + V
Sbjct: 368 SDGALRLFERMKMD---GIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNENGVVVNAVF 424
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
Y++++D + + R EAEKV EM +G P + +N LI LCK + +DAL
Sbjct: 425 YSSLIDGLGKAGRV-------DEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDAL 477
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
L RM GC TF +LI L++ R EE +M D M G ++ A ++ L+
Sbjct: 478 ALVKRMERDGCEQTVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNV---ACFRALS 534
Query: 203 I-LCGIERVEHALKVF 217
I LC +V A KV
Sbjct: 535 IGLCLSGKVARACKVL 550
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 105/263 (39%), Gaps = 10/263 (3%)
Query: 8 KRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWC-VDGKLEEARR 66
K D + +++ C G A MV+++ + + + M + C +G ++
Sbjct: 244 KPDVVTYNTMIKGYCKAGKTRKAIEMVREMEVINLEPDVVSYMTVMQACYAEGDVDFCLS 303
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFN 126
L EM GFE+ Y+ + +C LC+ E + M G N +
Sbjct: 304 LYHEMEDKGFEVPSHGYSLV---ICGLCKMGKVL----EGYALFENMIRNGCKGNKAVYT 356
Query: 127 VLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSA 186
LI K ++ AL+LF RM G P+E T+ ++ L ++ R+EE
Sbjct: 357 ALIDCYGKSGNSDGALRLFERMKMDGIEPDEVTYSAIVNGLCKSGRVEEALSYFQFCNEN 416
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
G ++ Y + L RV+ A KVF M GC P Y+ L+ L R+D
Sbjct: 417 G--VVVNAVFYSSLIDGLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRID 474
Query: 247 KANALFHEAQSRGLAVTPKEYAV 269
A AL + G T + +
Sbjct: 475 DALALVKRMERDGCEQTVYTFTI 497
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL-GVVAYNAMLDCVCELCRQKDPFL 101
P+ + ++L+K C G ++ A + EM + V+ Y+ ++D +C R K+ F
Sbjct: 235 PNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFE 294
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
L E +V D + VP + T+NVLI C+ K + A + M GC PN +
Sbjct: 295 LFEE----MVSKD-QIVPDPL-TYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYS 348
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
L+ L +A +L++ ++ MKS+G D Y + +++ A+++ MK
Sbjct: 349 ALVDGLCKAGKLQDAKGVLAEMKSSGLKP--DAITYTSLINFFSRNGQIDEAIELLTEMK 406
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ C+ T+++++ L R D+A + + +G+ + Y +
Sbjct: 407 ENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRI 454
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 12/251 (4%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDL--ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
++V+ C +G A +VK++ ++ +P+ L+ G C +G+L+EA L EM
Sbjct: 240 FNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEM 299
Query: 72 Y-RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
+ + YN +++ C + A V+ M G NV ++ L+
Sbjct: 300 VSKDQIVPDPLTYNVLINGFCREGKA-------DRARNVIEFMKNNGCCPNVFNYSALVD 352
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
LCK K +DA + M G P+ T+ LI + +++E E++ MK A
Sbjct: 353 GLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQA 412
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
D + L LC R + AL + + G +Y ++++ L + + KAN
Sbjct: 413 --DTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANK 470
Query: 251 LFHEAQSRGLA 261
L SRG
Sbjct: 471 LLGLMLSRGFV 481
>Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G C G L+ AR++ EM G + VV NAML+ +C+ + + F L E
Sbjct: 299 LIHGLCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEE----- 353
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL--- 167
M G RNV ++NV + L + K ++ + ++ + E C TT+ +L+ L
Sbjct: 354 --MGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKN 410
Query: 168 ---YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+A R+ EG + DR G +D AY + LC R++ A KV +M G
Sbjct: 411 GYVTKALRVLEGAD--DR------GDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRG 462
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
C+ Y+ L+ +N+VD A +F E + G + Y +
Sbjct: 463 CKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNI 507
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+L+ G C +G + +A R+ G ++ AY++M++ +C R EA KV
Sbjct: 402 ILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRL-------DEAAKV 454
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
L MD RG N +N LI K K + A+++F M GC PN T+ ++I +
Sbjct: 455 LNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCR 514
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG--IERVEHALKVFAMMKADGCEP 227
A R E ++ M G+ L Y + LC + + AL++ A G +P
Sbjct: 515 AERFPEAYHCVEEMLEKGWKPDL--ITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKP 572
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
I +++++ +L + +V A L+ + R A
Sbjct: 573 DITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCA 606
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +++I G+C + EA EM G++ ++ Y+ ++D +C+ ++
Sbjct: 500 PNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNEN---- 555
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ + +G ++ N++I LC K + AL+L+ M + C N T
Sbjct: 556 -DTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNT 613
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
++ Y+ E+ ++ ++ G D +Y L LC RV A+
Sbjct: 614 IMEGFYKIGDCEKASKIWAQISEDGLKP--DIISYNITLNGLCTWGRVTDAVGFLNDALD 671
Query: 223 DGCEPGIKTYDLLM 236
+G P + T+++L+
Sbjct: 672 NGVMPTVITWNILV 685
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P ++L+K C G+ +A++L M+ G + Y +++ ++ +D L
Sbjct: 150 PSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKI---RD---L 203
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW-GCYPNETTFV 161
+S E V EM RGV +V +N++I K+ ++ R+ +P+ ++
Sbjct: 204 NSALE-VFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYN 262
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
++I L + R +E E+ +RMK + D Y + LC ++ A KV+ M
Sbjct: 263 IMISGLCRCGRFKESLEIWERMKMNDWKH--DAFTYSALIHGLCEGGDLDGARKVYEEMV 320
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G + + T + +++ L +VD++ L+ E + G
Sbjct: 321 LRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG 358
>Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:24488667-24490754 | 20130731
Length = 695
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G C G L+ AR++ EM G + VV NAML+ +C+ + + F L E
Sbjct: 299 LIHGLCEGGDLDGARKVYEEMVLRGVKADVVTCNAMLNGLCKAGKVDESFELWEE----- 353
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL--- 167
M G RNV ++NV + L + K ++ + ++ + E C TT+ +L+ L
Sbjct: 354 --MGNCG-SRNVVSYNVFLKGLFENGKVDEVINVWEVLREMDCDVESTTYGILVHGLCKN 410
Query: 168 ---YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+A R+ EG + DR G +D AY + LC R++ A KV +M G
Sbjct: 411 GYVTKALRVLEGAD--DR------GDDVDAFAYSSMINGLCREGRLDEAAKVLNLMDKRG 462
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
C+ Y+ L+ +N+VD A +F E + G + Y +
Sbjct: 463 CKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNI 507
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+L+ G C +G + +A R+ G ++ AY++M++ +C R EA KV
Sbjct: 402 ILVHGLCKNGYVTKALRVLEGADDRGDDVDAFAYSSMINGLCREGRL-------DEAAKV 454
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
L MD RG N +N LI K K + A+++F M GC PN T+ ++I +
Sbjct: 455 LNLMDKRGCKLNAHVYNALIDGFMKNNKVDSAVQVFREMSTNGCSPNVVTYNIVINGFCR 514
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG--IERVEHALKVFAMMKADGCEP 227
A R E ++ M G+ L Y + LC + + AL++ A G +P
Sbjct: 515 AERFPEAYHCVEEMLEKGWKPDL--ITYSTLIDGLCQGKMNENDTALRLCYQFLAKGFKP 572
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
I +++++ +L + +V A L+ + R A
Sbjct: 573 DITMHNIVIHRLCSSGKVQYALQLYWMMRKRNCA 606
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +++I G+C + EA EM G++ ++ Y+ ++D +C+ ++
Sbjct: 500 PNVVTYNIVINGFCRAERFPEAYHCVEEMLEKGWKPDLITYSTLIDGLCQGKMNEN---- 555
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ + +G ++ N++I LC K + AL+L+ M + C N T
Sbjct: 556 -DTALRLCYQFLAKGFKPDITMHNIVIHRLCSSGKVQYALQLYWMMRKRNC-ANLVTHNT 613
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
++ Y+ E+ ++ ++ G D +Y L LC RV A+
Sbjct: 614 IMEGFYKIGDCEKASKIWAQISEDGLKP--DIISYNITLNGLCTWGRVTDAVGFLNDALD 671
Query: 223 DGCEPGIKTYDLLM 236
+G P + T+++L+
Sbjct: 672 NGVMPTVITWNILV 685
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 100/218 (45%), Gaps = 10/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P ++L+K C G+ +A++L M+ G + Y +++ ++ +D L
Sbjct: 150 PSVQTYNVLMKVLCKKGEFLKAKKLVTWMWSVGMKPDKFTYGTLINLFVKI---RD---L 203
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW-GCYPNETTFV 161
+S E V EM RGV +V +N++I K+ ++ R+ +P+ ++
Sbjct: 204 NSALE-VFDEMSERGVEPDVACYNIIIDGFFKMGDFVKGKMMWERLLRVETVFPSVVSYN 262
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
++I L + R +E E+ +RMK + D Y + LC ++ A KV+ M
Sbjct: 263 IMISGLCRCGRFKESLEIWERMKMNDWKH--DAFTYSALIHGLCEGGDLDGARKVYEEMV 320
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
G + + T + +++ L +VD++ L+ E + G
Sbjct: 321 LRGVKADVVTCNAMLNGLCKAGKVDESFELWEEMGNCG 358
>Medtr1g108270.1 | PPR containing plant-like protein | HC |
chr1:48926827-48924799 | 20130731
Length = 509
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 117/263 (44%), Gaps = 13/263 (4%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV--IFPDEAMCDMLIKGWCVD 58
ME+ YGLK +++ LC F + + D R + P+ +LI+GW
Sbjct: 182 MEK-YGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQ 240
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
L + + EM GF+ VV Y +++ C+ + + EA + +M + V
Sbjct: 241 QNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKK-------YDEAIGIYHDMLSKNV 293
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ + IT L + ++A + F + G P T+ ++ + + R+++
Sbjct: 294 NPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYR 353
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD-GCEPGIKTYDLLMS 237
++ MK G G + + Y L L R + A VF M ++ GCEP + TY +++
Sbjct: 354 IVGEMKELGIGP--NARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVR 411
Query: 238 KLGAHNRVDKANALFHEAQSRGL 260
N++D A +++E + +G+
Sbjct: 412 MFCNENQLDMAMVVWNEMKDKGI 434
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+E+A+ L +M + E + +Y ++ E Q+ L + ++V EM G
Sbjct: 208 VEKAQELFDKMRQWNLEPNLKSYTILI----EGWSQQQNLL---KVDEVCREMKDDGFQP 260
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T+ ++I CK +K ++A+ ++H M P+ + I L +R++E E
Sbjct: 261 DVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFF 320
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
++ K++GF + Y ++ C R++ A ++ MK G P +TYD+++ L
Sbjct: 321 EKSKASGFPP--EAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLI 378
Query: 241 AHNRVDKANALFHEAQSR-GLAVTPKEYAV 269
R +A ++F S G + YA+
Sbjct: 379 KGGRTKEAYSVFQRMSSETGCEPSVSTYAI 408
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 118/242 (48%), Gaps = 27/242 (11%)
Query: 36 DLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG-----GFELGVVAYNAMLDCV 90
D++ FP E ++++ V KL A LA +R GF ++A+++ +
Sbjct: 76 DVSLRNFPVEVSPELVV---AVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEAL 132
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
++ + K + ++ EM R + N +TF+++ + + ++ALK F RM +
Sbjct: 133 GKIRQFKMIW-------NLVDEMKQRKL-LNGDTFSLIARRYVRAKVIKEALKTFERMEK 184
Query: 151 WGCYPNETTFVVLIRSLYQAA-RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILC-GIE 208
+G P + F LI L ++ +E+ E+ D+M+ +L K+Y TIL G
Sbjct: 185 YGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNL--KSY----TILIEGWS 238
Query: 209 RVEHALKVFAM---MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
+ ++ LKV + MK DG +P + TY ++++ + D+A ++H+ S+ + +P
Sbjct: 239 QQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPH 298
Query: 266 EY 267
Y
Sbjct: 299 IY 300
>Medtr2g030540.1 | PPR containing plant-like protein | HC |
chr2:11523849-11519339 | 20130731
Length = 639
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 110/256 (42%), Gaps = 10/256 (3%)
Query: 18 VEKLCSKGFASYAERMVKDLARVIFPDEAMCDM-LIKGWCVDGKLEEARRLAGEMYRGGF 76
V L G +S A R+ ++ V + M +++ C GK+ EA L +
Sbjct: 367 VRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCI 426
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIR 136
+ YN + L R K +H EK M G P ++ T+N+LI++ +
Sbjct: 427 TTDTIMYNTVFTA---LGRLKQVSHIHDLYEK----MKQDGPPPDIFTYNILISSYGRAG 479
Query: 137 KTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
+ + A+K+F + C P+ ++ LI L + ++E M+ G D
Sbjct: 480 RVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAHMRFKEMQEKGLNP--DVVT 537
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
Y + ++VE A +F M A+GC P + TY++L+ L R +A L+ + +
Sbjct: 538 YSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLK 597
Query: 257 SRGLAVTPKEYAVDPR 272
+GL YAV R
Sbjct: 598 QQGLTPDSITYAVLER 613
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 125/325 (38%), Gaps = 81/325 (24%)
Query: 3 RDYGLKRDRGSLKVVVE-----KLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCV 57
+ +GL+ + S K +++ + C K F Y + + + IF + D L K
Sbjct: 180 KKWGLRFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAK---- 235
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
D K+++A ++ +M R E Y M+ + + E+ + M +G
Sbjct: 236 DQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKT-------DESLALFQAMLEKG 288
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
N+ +N +I L K R + A+ LF +M E GC PNE T+ VL+ L +L + D
Sbjct: 289 FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLD 348
Query: 178 EMIDRMKS-------AGFGASL-----------------------DKKAYYQFLTILCG- 206
+++ K A F +L DK AY L LC
Sbjct: 349 NIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSS 408
Query: 207 ----------------------------------IERVEHALKVFAMMKADGCEPGIKTY 232
+++V H ++ MK DG P I TY
Sbjct: 409 GKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPDIFTY 468
Query: 233 DLLMSKLGAHNRVDKANALFHEAQS 257
++L+S G RVD A +F E ++
Sbjct: 469 NILISSYGRAGRVDSAVKIFEELEN 493
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G + R G + + G +Y +L L R D +A V ++M G
Sbjct: 167 GFFGDLDRCVGLVKKWGLRFNAYSYKCLLQGYLRL-RDCD------KAFGVYLDMLRCGY 219
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
++ FN+L+ L K +K + A K+F M C P+ T+ ++IR +A + +E
Sbjct: 220 SLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLA 279
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ M GF +L+ AY + L + A+ +F+ M +GC+P TY +L++
Sbjct: 280 LFQAMLEKGF--TLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNV 337
Query: 239 LGAHNRVDKANAL 251
L A +++K + +
Sbjct: 338 LVAEGQLNKLDNI 350
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+ E +L +M+ RGV ++ T N+LI + + +K +WG N ++ L+
Sbjct: 142 QTESLLDDMEKRGVKGSISTVNILIGFFGDLDRCVGLVK------KWGLRFNAYSYKCLL 195
Query: 165 RSLYQAARLEEGDEM----IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+ RL + D+ +D ++ G SLD A+ L L ++V+ A KVF M
Sbjct: 196 QGYL---RLRDCDKAFGVYLDMLRC---GYSLDIFAFNMLLDALAKDQKVDKAYKVFEDM 249
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
K CEP TY +++ G + D++ ALF +G + Y
Sbjct: 250 KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAY 296
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 18/241 (7%)
Query: 30 AERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
AE M+K++ + + PD ++ I G+C G ++A L EM V Y +++D
Sbjct: 376 AEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLID 435
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ R SEAE+ + G+ ++ FN LI C + A +L M
Sbjct: 436 VFGKRNRM-------SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEM 488
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
P+E TF L++ + ++EE +++D MK G K + + T++ G
Sbjct: 489 DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI-----KPDHISYNTLISGYS 543
Query: 209 R---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
+ ++ AL+VF M + G +P + TY+ L+ D A L E QS+G +TP
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG--ITPD 601
Query: 266 E 266
+
Sbjct: 602 D 602
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 108/256 (42%), Gaps = 10/256 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
+K + +++ LC +G A+ + + + P+ + +I G+C+ GK E A
Sbjct: 212 NIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAA 271
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M + YN+ + +C+ R + EA VL ++ G+ N T
Sbjct: 272 SKIFKTMKDKNLKPDCYTYNSFISRLCKERRIE-------EASGVLCKLLESGLVPNAVT 324
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N LI C + A M G + T+ +LI +L+ R+EE ++MI M+
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D Y + C + AL +F M P ++TY L+ G NR
Sbjct: 385 EKGVEP--DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442
Query: 245 VDKANALFHEAQSRGL 260
+ +A F ++ G+
Sbjct: 443 MSEAEEKFKKSIKEGM 458
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 9/220 (4%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++I C +GK ++A+ G M G + VV YN +++ C R K A K
Sbjct: 221 NIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC--LRGK-----FEAASK 273
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ M + + + T+N I+ LCK R+ E+A + ++ E G PN T+ LI
Sbjct: 274 IFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCC 333
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
L++ D M + G AS+ Y + L +R+E A + M+ G EP
Sbjct: 334 NKGDLDKAFAYRDEMMNRGIVASV--FTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPD 391
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ TY++ ++ KA +LF E + + T + Y
Sbjct: 392 VVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 31/285 (10%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEE 63
YG+K + + V+ C +G A ++ K + + + PD + I C + ++EE
Sbjct: 246 YGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEE 305
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF--------------------LLH 103
A + ++ G V YNA++D C F L+H
Sbjct: 306 ASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIH 365
Query: 104 S--------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
+ EAE ++ EM +GV +V T+N+ I C+ + AL LF M E P
Sbjct: 366 ALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRP 425
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK 215
T+ LI + R+ E +E KS G D + + C ++ A +
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFK--KSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ M P T++ LM +V++A L E + RG+
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGI 528
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 10/231 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
R+ G++ D + + + C G A A + ++ + I P LI + ++
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EA + + G ++ +NA++D C F ++L EMD V +
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF-------QLLKEMDNAKVVPD 496
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
TFN L+ C+ RK E+A KL M E G P+ ++ LI + +++ E+ D
Sbjct: 497 EVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFD 556
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
M S GF +L Y + I +HA ++ M++ G P TY
Sbjct: 557 EMLSLGFDPTL--LTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 2/158 (1%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
EM + ++ TFN++I LC+ K + A M +G PN T+ +I
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKT 231
+ E ++ MK D Y F++ LC R+E A V + G P T
Sbjct: 267 KFEAASKIFKTMKDKNLKP--DCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVT 324
Query: 232 YDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
Y+ L+ +DKA A E +RG+ + Y +
Sbjct: 325 YNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362
>Medtr4g040410.1 | PPR containing plant-like protein | HC |
chr4:14488883-14491771 | 20130731
Length = 524
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 26/232 (11%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC---ELCRQKD-- 98
D ++LI+G+CV G+++EA R +M G VV+YN ++ +C ++ R +D
Sbjct: 197 DSFTFNILIRGFCVAGEIDEAFRFLNDMRNFGCCPDVVSYNTLMTGLCRVNDVDRARDLL 256
Query: 99 ---------PFLL----------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
+++ EA + EM GV +V +FN LI K
Sbjct: 257 KEINSPNDVSYMIVISGYCKLSNMKEASSIFNEMVRSGVQPSVASFNALIDGFVKAGDIS 316
Query: 140 DALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ 199
A+ + +M GC P+ TF LI + +++ G E+ + MK+ F A+L Y
Sbjct: 317 SAVDMHKKMILHGCDPDVVTFTSLIDGYCRVGQVDYGLELWNEMKARNFSANL--YTYSI 374
Query: 200 FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
++ LC R++ A ++ ++ P Y+ ++ VD+ANA+
Sbjct: 375 IISALCKSNRLQEAHELLRLLNQSEIVPQAFIYNPVIDGYCKSGNVDEANAI 426
>Medtr4g062480.2 | PPR containing plant-like protein | HC |
chr4:23218652-23215388 | 20130731
Length = 457
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++++KGW G+ E A ++ EM + VV+YN+++ L R+ D
Sbjct: 180 PNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGF---LSRKGDL--- 233
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A +++ +M +G N T+ +L+ LC + K E+A KL M GC P F V
Sbjct: 234 -DKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSV 292
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + +++E + M+ D Y F+ LC + A K+ M+
Sbjct: 293 LMNDLGKRGKIDEAMVLFREMRKRRLKP--DVVTYNVFVNYLCKEGKTAEAYKMLVEMQI 350
Query: 223 DGCEPGIKTYDLLMSKL 239
GCEP TY +L+ L
Sbjct: 351 SGCEPNAATYRMLLDGL 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 1 MERDY--GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCV 57
ER Y G + + + ++++ KG A ++ + L R + P + LI
Sbjct: 170 FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSR 229
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
G L++A RL +M R G V Y +++ +C L + + EA+K++ +M YRG
Sbjct: 230 KGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGK-------YEEAKKLMFDMAYRG 282
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ F+VL+ +L K K ++A+ LF M + P+ T+ V + L + + E
Sbjct: 283 CKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAY 342
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+M+ M+ + G + Y L LC E L V +M A P T++ L+
Sbjct: 343 KMLVEMQIS--GCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVV 400
Query: 238 KLGAHNRVD 246
L +D
Sbjct: 401 GLLKSGNID 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 82 AYNAMLDCVCE---LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
++NA+L+ + + C D F + EM +R N TFN+++ K +
Sbjct: 149 SFNALLNILVDHGMFCEANDAF-------ERCYEMGFRP---NTVTFNIMMKGWLKKGEW 198
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
E+A K+F M E P+ ++ LI L + L++ +++ M+ G A + Y
Sbjct: 199 ENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA--NGVTYA 256
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC + + E A K+ M GC+P + + +LM+ LG ++D+A LF E + R
Sbjct: 257 LLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKR 316
Query: 259 GLAVTPKEYAVDPRY 273
L Y V Y
Sbjct: 317 RLKPDVVTYNVFVNY 331
>Medtr4g062480.3 | PPR containing plant-like protein | HC |
chr4:23218661-23215388 | 20130731
Length = 457
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++++KGW G+ E A ++ EM + VV+YN+++ L R+ D
Sbjct: 180 PNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGF---LSRKGDL--- 233
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A +++ +M +G N T+ +L+ LC + K E+A KL M GC P F V
Sbjct: 234 -DKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSV 292
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + +++E + M+ D Y F+ LC + A K+ M+
Sbjct: 293 LMNDLGKRGKIDEAMVLFREMRKRRLKP--DVVTYNVFVNYLCKEGKTAEAYKMLVEMQI 350
Query: 223 DGCEPGIKTYDLLMSKL 239
GCEP TY +L+ L
Sbjct: 351 SGCEPNAATYRMLLDGL 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 1 MERDY--GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCV 57
ER Y G + + + ++++ KG A ++ + L R + P + LI
Sbjct: 170 FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSR 229
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
G L++A RL +M R G V Y +++ +C L + + EA+K++ +M YRG
Sbjct: 230 KGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGK-------YEEAKKLMFDMAYRG 282
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ F+VL+ +L K K ++A+ LF M + P+ T+ V + L + + E
Sbjct: 283 CKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAY 342
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+M+ M+ + G + Y L LC E L V +M A P T++ L+
Sbjct: 343 KMLVEMQIS--GCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVV 400
Query: 238 KLGAHNRVD 246
L +D
Sbjct: 401 GLLKSGNID 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 82 AYNAMLDCVCE---LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
++NA+L+ + + C D F + EM +R N TFN+++ K +
Sbjct: 149 SFNALLNILVDHGMFCEANDAF-------ERCYEMGFRP---NTVTFNIMMKGWLKKGEW 198
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
E+A K+F M E P+ ++ LI L + L++ +++ M+ G A + Y
Sbjct: 199 ENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA--NGVTYA 256
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC + + E A K+ M GC+P + + +LM+ LG ++D+A LF E + R
Sbjct: 257 LLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKR 316
Query: 259 GLAVTPKEYAVDPRY 273
L Y V Y
Sbjct: 317 RLKPDVVTYNVFVNY 331
>Medtr4g062480.1 | PPR containing plant-like protein | HC |
chr4:23218638-23215388 | 20130731
Length = 457
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ ++++KGW G+ E A ++ EM + VV+YN+++ L R+ D
Sbjct: 180 PNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGF---LSRKGDL--- 233
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A +++ +M +G N T+ +L+ LC + K E+A KL M GC P F V
Sbjct: 234 -DKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSV 292
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + +++E + M+ D Y F+ LC + A K+ M+
Sbjct: 293 LMNDLGKRGKIDEAMVLFREMRKRRLKP--DVVTYNVFVNYLCKEGKTAEAYKMLVEMQI 350
Query: 223 DGCEPGIKTYDLLMSKL 239
GCEP TY +L+ L
Sbjct: 351 SGCEPNAATYRMLLDGL 367
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 1 MERDY--GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCV 57
ER Y G + + + ++++ KG A ++ + L R + P + LI
Sbjct: 170 FERCYEMGFRPNTVTFNIMMKGWLKKGEWENACKVFDEMLERKVQPSVVSYNSLIGFLSR 229
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
G L++A RL +M R G V Y +++ +C L + + EA+K++ +M YRG
Sbjct: 230 KGDLDKAMRLVEDMRRKGKRANGVTYALLMEGLCSLGK-------YEEAKKLMFDMAYRG 282
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ F+VL+ +L K K ++A+ LF M + P+ T+ V + L + + E
Sbjct: 283 CKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKRRLKPDVVTYNVFVNYLCKEGKTAEAY 342
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+M+ M+ + G + Y L LC E L V +M A P T++ L+
Sbjct: 343 KMLVEMQIS--GCEPNAATYRMLLDGLCRNGDFESGLSVLNLMFASRHCPLSDTFNCLVV 400
Query: 238 KLGAHNRVD 246
L +D
Sbjct: 401 GLLKSGNID 409
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 82 AYNAMLDCVCE---LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKT 138
++NA+L+ + + C D F + EM +R N TFN+++ K +
Sbjct: 149 SFNALLNILVDHGMFCEANDAF-------ERCYEMGFRP---NTVTFNIMMKGWLKKGEW 198
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
E+A K+F M E P+ ++ LI L + L++ +++ M+ G A + Y
Sbjct: 199 ENACKVFDEMLERKVQPSVVSYNSLIGFLSRKGDLDKAMRLVEDMRRKGKRA--NGVTYA 256
Query: 199 QFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSR 258
+ LC + + E A K+ M GC+P + + +LM+ LG ++D+A LF E + R
Sbjct: 257 LLMEGLCSLGKYEEAKKLMFDMAYRGCKPQLVNFSVLMNDLGKRGKIDEAMVLFREMRKR 316
Query: 259 GLAVTPKEYAVDPRY 273
L Y V Y
Sbjct: 317 RLKPDVVTYNVFVNY 331
>Medtr6g080160.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30134387-30135572 | 20130731
Length = 276
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 39/275 (14%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKG----------- 54
G K D S + ++ +LC G A ++++ + R++ + L+K
Sbjct: 20 GFKLDHVSYRTLINELCKTGETRAALQVLRKIERILVKPNVLIYFLVKEVDREKYVFNTI 79
Query: 55 ---------WCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE 105
+ ++EA L EM+ Y +++D +C R D +
Sbjct: 80 SKKGVKPNLHMYNKMVDEAVNLLNEMHSKRMTPDTFTYTSLIDGLCISGRTSDVW----- 134
Query: 106 AEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
++ EM RG P NV T+N L+ LCK H++ + G PN T+ +L+
Sbjct: 135 --DLIDEMHERGQPANVITYNSLLDALCK----------NHQIKDQGIQPNLYTYTLLVD 182
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
+ + +L++ + + G+ LD Y + LC + AL + + M+ + C
Sbjct: 183 GICKNGKLKDAKAVYQDLLIKGY--HLDVIMYNVMVNWLCKEGLFDEALSILSKMEHNNC 240
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P + TY++++ L + + DKA L E RGL
Sbjct: 241 TPDVVTYEIVIRALFKNVKNDKAVKLLCEMIDRGL 275
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 13/217 (5%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D+ +L+KG C+ ++ E +L + G V YN +L LCR
Sbjct: 176 DDYTFGILMKGLCLTNRIGEGFKLLQLIKNNGVTPNTVIYNTLLHA---LCRNGKV---- 228
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A ++ EM V N TFN+LI++ K AL L + P+ T +
Sbjct: 229 GRARSLMNEM----VDPNEVTFNILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKV 284
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
+ L A R+ E E+++R++S G SLD AY + CG+ +V+ L M+
Sbjct: 285 VEILCNAGRVTEAAEVLERVES--LGGSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENK 342
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P + TY++L+ +D A LF++ ++ G+
Sbjct: 343 GYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGI 379
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 40/258 (15%)
Query: 35 KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELC 94
K A + PD +++ C G++ EA + + G L VAYN ++ C +
Sbjct: 268 KCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVG 327
Query: 95 RQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
+ K LH L +M+ +G NV+T+N+LI C+ R + AL LF+ M G
Sbjct: 328 KVKVG--LH-----FLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGIN 380
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA------------------------ 190
N TF +IR L R+E+G +++ M+ G+
Sbjct: 381 RNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEAS 440
Query: 191 -------SLDKKAYYQFLTIL--CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
L +A + +TI+ C +E A ++ M +G P I Y+ L+
Sbjct: 441 EFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQ 500
Query: 242 HNRVDKANALFHEAQSRG 259
H + +A L +E S
Sbjct: 501 HGSIREAVELINEMISNN 518
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 12 GSLKVVVEKLCSKGFASYAE-----RMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GSL V KGF + +K + + P+ ++LI G+C L+ A
Sbjct: 309 GSLDAVAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLAL 368
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL----------------------- 102
L +M G V ++ M+ +C R +D F +
Sbjct: 369 DLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIY 428
Query: 103 -------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYP 155
EA + L +M + PR V+ ++ I CK EDA ++ +M + G P
Sbjct: 429 GLFKQNRFDEASEFLAKMG-KLFPRAVDR-SMTIIQKCKEGAIEDAKNIYDKMIDEGGIP 486
Query: 156 NETTFVVLIRSLYQAARLEEGDEMIDRMKSAG-FGASLDKKAYYQFLTILCGIERVEHAL 214
+ + L+ Q + E E+I+ M S F + + +T C ++E AL
Sbjct: 487 SILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIA---STFNAIITEFCEQGKIESAL 543
Query: 215 KVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
K + A GC P +TY L+ L + KA +F E +G+
Sbjct: 544 KFMEDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGI 589
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 121/297 (40%), Gaps = 41/297 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
L D ++ VVE LC+ G + A +++ + + +A+ + LIKG+C GK++
Sbjct: 273 SLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVG 332
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+M G+ V YN ++ CE R D A + +M G+ RN T
Sbjct: 333 LHFLKQMENKGYLPNVDTYNILIYGFCE-SRMLDL------ALDLFNDMKTDGINRNFVT 385
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEW--GCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
F+ +I LC + ED + M E G + + + +I L++ R +E E + +
Sbjct: 386 FDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSIIYGLFKQNRFDEASEFLAK 445
Query: 183 M---------------KSAGFGASLDKKAYYQFLTILCGIERV-----------EH---- 212
M + GA D K Y + GI + +H
Sbjct: 446 MGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIPSILVYNSLVHGFSQHGSIR 505
Query: 213 -ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
A+++ M ++ C P T++ ++++ +++ A + +RG + Y+
Sbjct: 506 EAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFMEDITARGCVPNTETYS 562
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
+ D + + + + ++ +M R F ++ N +L+ + + E
Sbjct: 140 LLDTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVR-SNSSHSLVFSREV 198
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+ V++ GV NV TFN+LI C TE+AL+L ++MGE+GC P+ T+ ++ +
Sbjct: 199 FQDAVKL---GVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTA 255
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
L + ++L + +++ +MK++G ++ Y + C ++ ++ A +V +M G
Sbjct: 256 LCKRSQLTQVRDLLLQMKNSGLFP--NRNTYNILVHGYCKLKWLKEAAEVIELMTGKGML 313
Query: 227 PGIKTYDLLMSKLGAHNRVDKA 248
P + TY+ ++ L ++D+A
Sbjct: 314 PDVWTYNTMVRGLCDEGKIDEA 335
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKL 61
++ GL +R + ++V C + A +++ + + + PD + +++G C +GK+
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKI 332
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+EA RL +M VV YN ++D C R D A K++ EM RGV N
Sbjct: 333 DEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDA------AFKLVEEMKARGVKEN 385
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T N++I C K ++A + +M E G P+ T+ +I +A ++ E +M+D
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMD 445
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M G LD L +C ++++ A + + G TY L+
Sbjct: 446 EMGRKGL--KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFK 503
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
+ D+A L+ E + G+ T Y
Sbjct: 504 DEQADRALKLWEEMKETGIVATIITY 529
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAER-MVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+K + + ++++ C++G A MVK + PD + +I G+C GK+ EA
Sbjct: 381 GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEA 440
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ EM R G +L N +L +C + D + L +A K RG + T
Sbjct: 441 YKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK-------RGYILDEVT 493
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ LI K + + ALKL+ M E G T+ +IR L + + ++ + ++ +
Sbjct: 494 YGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL 553
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G D+ + C VE A + M +P I T ++L+ L
Sbjct: 554 EKGLVP--DESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
++K LF+ S+G + Y +
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNI 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 19/238 (7%)
Query: 13 SLKVVVEKLCSKGFASYA-ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++ LC G A +++ + L + + PDE+ +++I G+C +G +E+A + +M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587
Query: 72 YRGGFELGVVAYNAMLDCVC-ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
+ + N +L +C E +K L ++ K G P + T+N++I+
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISK--------GKPMDTVTYNIIIS 639
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+ CK R+ EDA L M P+ T+ ++ L +A R EE +++ + G
Sbjct: 640 SFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQV 699
Query: 191 SLDKKA---------YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ Y + ++ LC + + A+K+F + G TY LM L
Sbjct: 700 KTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 109/234 (46%), Gaps = 10/234 (4%)
Query: 29 YAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML 87
++ + +D ++ + P+ ++LI G+C D EEA RL +M G V YN +L
Sbjct: 194 FSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVL 253
Query: 88 DCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR 147
+C+ + ++ +L++M G+ N T+N+L+ CK++ ++A ++
Sbjct: 254 TALCKRSQL-------TQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIEL 306
Query: 148 MGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
M G P+ T+ ++R L +++E + D+M+S F D Y +
Sbjct: 307 MTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMES--FKLVPDVVTYNTLIDGCFEH 364
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ A K+ MKA G + T+++++ ++D+A+ + + G +
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFS 418
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 30 AERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A ++V+++ AR + + +++IK +C +GK++EA + +M GF YN M++
Sbjct: 370 AFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMIN 429
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
C+ + +EA K++ EM +G+ + T N L+ +C ++ +DA L +
Sbjct: 430 GYCKAGKM-------AEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKA 482
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
+ G +E T+ LI ++ + + ++ + MK G A++ Y + LC
Sbjct: 483 RKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATI--ITYNTIIRGLCLSG 540
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ + A+ + G P T ++++ V+KA
Sbjct: 541 KTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580
>Medtr2g036080.1 | PPR containing plant-like protein | HC |
chr2:15308501-15315184 | 20130731
Length = 1388
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 14/245 (5%)
Query: 26 FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNA 85
F S+ + M+ A + P+ A ++L+ C GK + A L +M G V YN
Sbjct: 163 FWSFFKEMI---ANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNT 219
Query: 86 MLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLF 145
+L+ C+ R K A +++ M +G+ +V T+NVLI +LC+ ++ +
Sbjct: 220 LLNWYCKKGRYK-------AASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLIL 272
Query: 146 HRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI-L 204
RM + YPNE T+ LI L + ++ ++ + M L Y L
Sbjct: 273 RRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNL---LPNSVTYNTLIFGH 329
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
C +E AL++ +M + G P TY L++ + H + +++ + G+ V
Sbjct: 330 CSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGH 389
Query: 265 KEYAV 269
Y
Sbjct: 390 ISYTT 394
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 44 DEAMCDMLIKGWCVD----GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
+ A+ D+LI+ C+ G EA RL G +RG F V N +L + + R+ D
Sbjct: 108 NPAVFDLLIR-VCLRENMVGDAVEAFRLMG--FRG-FSPSVFTCNMVLGSLVK-DREVDL 162
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
F EM V NV TFN+L+ LC+ K + A L +M E G +P T
Sbjct: 163 FW------SFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVT 216
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ L+ + R + E+ID M S G A D Y + LC R +
Sbjct: 217 YNTLLNWYCKKGRYKAASELIDAMASKGIAA--DVCTYNVLIDDLCRKSRSAKGYLILRR 274
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
M+ + P TY+ L++ L ++ A +F E
Sbjct: 275 MRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEE 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 11/257 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G K D +L V+V KLC + A +VK L + + P+ + L G+ +EA
Sbjct: 792 GFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEA 851
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
R + + G+ + ++ +C + K L E M GV
Sbjct: 852 RCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDE-------MKILGVSSQGVA 904
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I L + RKT++A ++ M E P TF L+ + + + + E+ M+
Sbjct: 905 MSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVME 964
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM-SKLGAHN 243
LD AY ++ LC ++ A K++ M+ P Y +L+ S L N
Sbjct: 965 QC--HVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGN 1022
Query: 244 RVDKANALFHEAQSRGL 260
+ ++ L + ++R L
Sbjct: 1023 YIVESEKLLRDLRTREL 1039
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 16/227 (7%)
Query: 22 CSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVV 81
CSK Y E ++ A PD LI G+C G L+ A + ++ GF++
Sbjct: 746 CSK---LYNEMIIHGFA----PDRLTWHSLILGYCKSGSLDVAVKFLRKITVEGFKVDCF 798
Query: 82 AYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
N ++ +CE K F ++ +++ GV NV+T+N L + ++A
Sbjct: 799 TLNVLVSKLCERNEIKMAF-------DLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEA 851
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
+ H + E G P F LIR + + ++ E+ D MK G S A +
Sbjct: 852 RCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKI--LGVSSQGVAMSAII 909
Query: 202 TILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
L + + A ++ +M P + T+ LM V KA
Sbjct: 910 RGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKA 956
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 116/316 (36%), Gaps = 73/316 (23%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++ L +G A ++ ++++ + P+ + LI G C +G +EEA RL M
Sbjct: 286 TYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVM 345
Query: 72 YRGGFELGVVAYNAMLDCVCE--------------------------------LCRQKDP 99
G V Y A+L+ + + LC+
Sbjct: 346 VSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNG-- 403
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLIT----------------------NLCKIRK 137
L EA ++L +M V ++ TF+VL+ N CK+
Sbjct: 404 --LLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKAGKTGLVPNRVLHSTLIYNYCKMGN 461
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
++AL + M + G + T VL+ S + RLEE + +D M G S
Sbjct: 462 LKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPS------ 515
Query: 198 YQFLTILCGIERVEH------ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
+T C I+ + A VF M + G P TY+ L+ L +++A
Sbjct: 516 --SVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIF 573
Query: 252 FHEAQSRGLAVTPKEY 267
H S A+ Y
Sbjct: 574 MHRPSSIPYAIGSTFY 589
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 94/230 (40%), Gaps = 9/230 (3%)
Query: 40 VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
++ P+ AM L+ G +G + A + +M G + +A+N +LD +
Sbjct: 652 LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKM--- 708
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
S+ +L M R + N+ T+N+L+ K KL++ M G P+ T
Sbjct: 709 ----SKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLT 764
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
+ LI ++ L+ + + ++ GF +D ++ LC ++ A +
Sbjct: 765 WHSLILGYCKSGSLDVAVKFLRKITVEGF--KVDCFTLNVLVSKLCERNEIKMAFDLVKQ 822
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ G P + TY+ L + D+A + H G A T K++
Sbjct: 823 LNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTT 872
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 11/229 (4%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
+ M+KD + PD + + LI +L+EA L EM VV YN ++ +
Sbjct: 325 KNMLKDGCK---PDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSL 381
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
E K P SEA L M GV + T+++LI CK + E AL L M E
Sbjct: 382 FE---DKAP---PSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDE 435
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G P + LI SL +A R E +E+ +K +S+ + Y + R
Sbjct: 436 KGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSV--RVYAVMIKHFGKCGRF 493
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
A+ +F MK GC P + Y+ L++ + + +D+A +LF + G
Sbjct: 494 NEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENG 542
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 27 ASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAM 86
+S+ ERM KD + P +LI G+C ++E+A L EM GF AY ++
Sbjct: 392 SSWLERMKKD---GVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 448
Query: 87 LDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFH 146
++ + + R + A ++ E+ +V + V+I + K + +A+ LF+
Sbjct: 449 INSLGKAKR-------YEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFN 501
Query: 147 RMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG 206
M + GC P+ + LI + +A ++E + M+ G ++ IL G
Sbjct: 502 EMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHN-----IILNG 556
Query: 207 IERV---EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ R + A+++FA MK+ +P +Y+ ++ L ++A L E S+G
Sbjct: 557 LARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGF 613
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK+EEA L EM V Y ++ + + R +D + ++ K G
Sbjct: 280 GKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLK-------DGC 332
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ-AARLEEGD 177
+V N LI L + + ++A++LF M C PN T+ +I+SL++ A E
Sbjct: 333 KPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEAS 392
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
++RMK G S Y + C RVE AL + M G P Y L++
Sbjct: 393 SWLERMKKDGVVPS--SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 450
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
LG R + AN LF E + + + + YAV
Sbjct: 451 SLGKAKRYEAANELFQELKENCGSSSVRVYAV 482
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 103 HSEAEKVLVEMDYRG--VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
H + ++ EM G P V T++ LI+ K+ + + A++LF M E G P +
Sbjct: 211 HEKVHELYNEMCSEGHCFPDTV-TYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIY 269
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+ ++ ++EE ++ M+ ++ Y + + L RVE A V+ M
Sbjct: 270 TTLMGIYFKLGKVEEALNLVHEMRMRRCVPTV--YTYTELIRGLGKSGRVEDAYGVYKNM 327
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
DGC+P + + L++ LG +R+ +A LF E R L TP
Sbjct: 328 LKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEM--RLLNCTPN 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 28/245 (11%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLARV--------IF---------PDEAMCDMLIKGW 55
+++ +V+ C+ G + +E +VK L RV IF P + +I
Sbjct: 147 TIQDMVKSPCAIGPSELSE-IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILML 205
Query: 56 CVDGKLEEARRLAGEMYRGGFEL-GVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD 114
+G E+ L EM G V Y+A++ +L R A ++ EM
Sbjct: 206 MQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRD-------DSAVRLFDEMK 258
Query: 115 YRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLE 174
G+ + + L+ K+ K E+AL L H M C P T+ LIR L ++ R+E
Sbjct: 259 ENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVE 318
Query: 175 EGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
+ + M G D + IL +R++ A+++F M+ C P + TY+
Sbjct: 319 DAYGVYKNMLKD--GCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNT 376
Query: 235 LMSKL 239
++ L
Sbjct: 377 IIKSL 381
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
++ L +++ AL +F+++ C P T+ +I L Q E+ E+ + M S G
Sbjct: 166 IVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEG 225
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D Y ++ + R + A+++F MK +G +P K Y LM +V++
Sbjct: 226 HCFP-DTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEE 284
Query: 248 ANALFHEAQSRGLAVTPKEYA 268
A L HE + R T Y
Sbjct: 285 ALNLVHEMRMRRCVPTVYTYT 305
>Medtr3g037490.1 | PPR containing plant-like protein | HC |
chr3:13777398-13775665 | 20130731
Length = 577
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 108/247 (43%), Gaps = 10/247 (4%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++ C++G AER +K + + P+ LI G+C G ++ + +M R
Sbjct: 163 TLIRVFCNEGDMDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVFEIYSDMLRN 222
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
G VV + ++D +C++ + A V MD GV N+ +N LI CK
Sbjct: 223 GLHPDVVTFAILVDVLCKVGDLE-------AARNCFVYMDKFGVFPNLYVYNCLIDGYCK 275
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+A++L M G + + T +L++ L + R EE +++ M+ AG A +
Sbjct: 276 AGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFA--NA 333
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + C + +E A++V + M EP + T+ L+ + A L+ E
Sbjct: 334 VTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAMGLYIE 393
Query: 255 AQSRGLA 261
+GL
Sbjct: 394 MVIKGLV 400
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 41/266 (15%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ C G A R+ ++ R +F D C +L+KG C G+ EEA+ L EM + G
Sbjct: 269 LIDGYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAG 328
Query: 76 FELGVVAYNAMLDCVC---------ELC-----RQKDPFLLH--------------SEAE 107
V YNA++D C E+C R+ +P ++ A
Sbjct: 329 VFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAAM 388
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+ +EM +G+ +V T+ LI CK+ ++ A +L M E G PN T LI L
Sbjct: 389 GLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKEMMEAGLTPNVVTVTSLIDGL 448
Query: 168 YQAARLEEGDEM-IDRMKSAGFGASLDKKA--------YYQFLTILCGIERVEHALKVFA 218
+ + ++ +++ + G D Y + LC R+ A K F
Sbjct: 449 LKEGKTYGAIKLFLEKTEVGSPGGKTDHSGVCSPNEVMYAALIQGLCKDGRIFKATKFFK 508
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNR 244
M+ G +P + Y ++ L AH R
Sbjct: 509 DMRCSGFKPDMVLYVIM---LEAHFR 531
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 98/236 (41%), Gaps = 25/236 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + V++ C G A + + R I P+ LI G+C G ++ A
Sbjct: 328 GVFANAVTYNAVIDGYCKMGDMEKAIEVCSQMTERKIEPNVITFSTLIDGFCKKGNMKAA 387
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM G VV Y A++D C++ K F LH E M G+ NV T
Sbjct: 388 MGLYIEMVIKGLVPDVVTYTALIDGHCKVENSKVAFELHKE-------MMEAGLTPNVVT 440
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWG-----------CYPNETTFVVLIRSLYQAARL 173
LI L K KT A+KLF E G C PNE + LI+ L + R+
Sbjct: 441 VTSLIDGLLKEGKTYGAIKLFLEKTEVGSPGGKTDHSGVCSPNEVMYAALIQGLCKDGRI 500
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
+ + M+ +GF K ++ +L R +H V M+ AD + G+
Sbjct: 501 FKATKFFKDMRCSGF-----KPDMVLYVIMLEAHFRFKHMFDVM-MLHADMLKTGV 550
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 9/245 (3%)
Query: 23 SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVA 82
SK F S L+R + P +L+ C G AR++ EM + G VV
Sbjct: 101 SKKFDSVWSVYNNLLSRGLLPTLITYGILLNCCCNQGDFSNARKVFDEMIQRGIVPNVVV 160
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
Y ++ C + D EAE+ L M GV N+ T+ LI CK +
Sbjct: 161 YTTLIRV---FCNEGD----MDEAERFLKLMRESGVEPNLYTYVTLIDGYCKTGNVKRVF 213
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
+++ M G +P+ TF +L+ L + LE M FG + Y +
Sbjct: 214 EIYSDMLRNGLHPDVVTFAILVDVLCKVGDLEAARNCFVYMDK--FGVFPNLYVYNCLID 271
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
C + A+++ M+ +G + T +L+ L R ++A L E + G+
Sbjct: 272 GYCKAGDLVEAMRLRDEMERNGVFGDVFTCSILVKGLCDSGRFEEAKNLMEEMEKAGVFA 331
Query: 263 TPKEY 267
Y
Sbjct: 332 NAVTY 336
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 116/272 (42%), Gaps = 19/272 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + +V + L G M++DL + I D IKG+C+ GK ++A
Sbjct: 400 GVFLDGVAYNIVFDSLFKLGKMDEVAGMLEDLKSMHIDFDIKHYTTFIKGYCLQGKPDKA 459
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ EM GF+ VVAYN + LC + SEA +L MD +GV N T
Sbjct: 460 YIIFKEMEEKGFKPDVVAYNVL---AAGLCGNRHV----SEAMDLLNYMDSQGVKPNSTT 512
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++I C K E+A F+ M + + ++ +A +E+ E+ +
Sbjct: 513 HKIIIEGFCSEGKIEEAEGYFNSMKDESV----EIYTAMVSGYCEADLIEKSYELFHELS 568
Query: 185 SAGFGAS-------LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+ G A L K Y + L LC ++ A +F G P + TY +++
Sbjct: 569 NRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIK 628
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
N + +A+ LF + +SRG+ Y V
Sbjct: 629 SYCTMNCLQEAHDLFQDMKSRGIKPDVITYTV 660
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 9/185 (4%)
Query: 17 VVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
V+ +LC KG A + L R PD ++IK +C L+EA L +M G
Sbjct: 591 VLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRG 650
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHS--------EAEKVLVEMDYRGVPRNVETFNV 127
+ V+ Y +LD + R K+ F + + +M R V +V + V
Sbjct: 651 IKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDVVIYTV 710
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
LI K+ EDA++LF+ + + G P+ T+ L L + E + + M S G
Sbjct: 711 LIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNEMSSKG 770
Query: 188 FGASL 192
L
Sbjct: 771 MTPPL 775
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 120/310 (38%), Gaps = 57/310 (18%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D + V+ LC S A ++ + ++ + P+ ++I+G+C +GK+EEA
Sbjct: 470 GFKPDVVAYNVLAAGLCGNRHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSEGKIEEA 529
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE----------------- 107
M E+ Y AM+ CE + + L E
Sbjct: 530 EGYFNSMKDESVEI----YTAMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSK 585
Query: 108 ----KVLVEM-------------DY---RGVPRNVETFNVLITNLCKIRKTEDALKLFHR 147
KVL E+ D+ RG +V T+ ++I + C + ++A LF
Sbjct: 586 VLYSKVLAELCQKGNMQRARSLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQD 645
Query: 148 MGEWGCYPNETTFVVLIRSLYQAARLEEG-DEMIDRMKSAGFGASL------------DK 194
M G P+ T+ VL+ + AR +E + K A + S D
Sbjct: 646 MKSRGIKPDVITYTVLLDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMKDREVSPDV 705
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
Y + ++ E A+++F + G EP TY L S L + A L++E
Sbjct: 706 VIYTVLIDGHIKVDNFEDAIRLFNEVMKRGLEPDNVTYTALFSGLLNSGNSEIAVTLYNE 765
Query: 255 AQSRGLAVTP 264
S+G+ TP
Sbjct: 766 MSSKGM--TP 773
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 16/260 (6%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ V++ LC KG S A ++V ++ + P+E + L+ G C+ GKL++A L M
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
+ + ++D + R D +VLV ++ +G N +++ LI+
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALD-------GVRVLVSLEEKGYRGNEFSYSSLISG 359
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
L K K E ++L+ M E GC PN + LI L + + +E E + MK+ G +
Sbjct: 360 LFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPN 419
Query: 192 LDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKA 248
+ + +++ G + A+ V+ M + C Y +L++ L + ++ +A
Sbjct: 420 -----SFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEA 474
Query: 249 NALFHEAQSRGLAVTPKEYA 268
++ + SRG+ + Y+
Sbjct: 475 LIVWKQMLSRGIKLDVVAYS 494
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 122/293 (41%), Gaps = 51/293 (17%)
Query: 14 LKVVVEKLC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
L VV+++ C Y + + I P+ +++IK C G +++A E++
Sbjct: 143 LNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAV----EVF 198
Query: 73 RGGFELGVVA----YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
RG + VA Y+ ++ +C R EA +L EM G N FNVL
Sbjct: 199 RGMSDRNCVADGYTYSTLMHGLCNEGRI-------DEAVSLLDEMQVEGTFPNPVAFNVL 251
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM----- 183
I+ LCK A KL M GC PNE T+ L+ L +L++ +++RM
Sbjct: 252 ISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKC 311
Query: 184 --KSAGFGA-------------------SLDKKAY----YQFLTILCGI---ERVEHALK 215
FG SL++K Y + + +++ G+ + EH ++
Sbjct: 312 VPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQ 371
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
++ M GC+P Y L+ L + D+A E +++G TP +
Sbjct: 372 LWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGH--TPNSFT 422
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 42/224 (18%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G +GK E +L EM G + + Y+A++D LCR+ P EA++ L
Sbjct: 356 LISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALID---GLCREGKP----DEAKEYL 408
Query: 111 VEMDYRGVPRNVETFN-----------------------------------VLITNLCKI 135
+EM +G N T++ +LI LCK
Sbjct: 409 IEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKN 468
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
K ++AL ++ +M G + + +I A +E+G ++ ++M D
Sbjct: 469 GKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVV 528
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
Y L C V A+ + M GC+P T D+ + L
Sbjct: 529 TYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 39/279 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
G D + V+V C G + A + +++ I P+ +LI +C GK++E
Sbjct: 290 GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEG 349
Query: 65 RRLAGEMYRGGFELGVVAYNAMLD------------CV--------------------CE 92
+ M G VV +NA++D CV C
Sbjct: 350 MEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 93 LCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWG 152
CR+K A +L +M + N+ T+N LI LCK R + A +L H M + G
Sbjct: 410 FCRKKS----MDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDG 465
Query: 153 CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEH 212
P++ TF I L + ++E+ ++ + +K A ++ Y + C E+
Sbjct: 466 FVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK--HAEANEFLYTALIDGYCKAEKFSD 523
Query: 213 ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
A +F M +GC P T+++L+ L +V+ A +L
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEA 64
G++ + S +V C G A+ L + F D LI G+C +L +A
Sbjct: 185 GVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDA 244
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ M + G V+Y ++ CE+ + EA ++ +M G +V T
Sbjct: 245 YKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI-------DEALELFFQMKEDGCFPDVPT 297
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ VL+ C++ K +ALK F M E G PN T+ VLI + +++EG EM+ M
Sbjct: 298 YTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTML 357
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G +S+ + + C +E A+ V MK + P +TY+ L+
Sbjct: 358 EKGLVSSV--VPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKS 415
Query: 245 VDKANALFHEAQSRGLA 261
+D+A AL ++ L+
Sbjct: 416 MDRAMALLNKMYENKLS 432
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
G ++E L +M G E ++++N M++ C++ V+ + + G+
Sbjct: 169 GLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKI------------GNVVVAKAYFCGL 216
Query: 119 PR-----NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARL 173
+ + T+ LI CKI + DA K+F M + GC NE ++ LI + ++
Sbjct: 217 MKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKI 276
Query: 174 EEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYD 233
+E E+ +MK G D Y + C + + ALK F M +G EP + TY
Sbjct: 277 DEALELFFQMKED--GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYT 334
Query: 234 LLMSKLGAHNRVDKANALFHEAQSRGL--AVTPKEYAVD 270
+L+ ++D+ + +GL +V P +D
Sbjct: 335 VLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALID 373
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 104/272 (38%), Gaps = 51/272 (18%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAER----MVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
L + + ++ LC A R M+KD PD+ I C GK+E
Sbjct: 431 LSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD---GFVPDQRTFCAFIDCLCKMGKVE 487
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A ++ + E Y A++D C+ + D LL M + G N
Sbjct: 488 QAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKR-------MLFEGCFPNS 540
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEW------------------------------- 151
TFNVL+ L K K EDA+ L MG++
Sbjct: 541 ITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQ 600
Query: 152 ----GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
GC PN T+ I++ + RL E +EM+ ++K G LD Y + I
Sbjct: 601 MISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI--LLDSFIYDVLVNAYGCI 658
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+++ A V M GCEP +TY +L+ L
Sbjct: 659 GQLDSAFGVLIRMFDTGCEPSRQTYSILLKHL 690
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 95/239 (39%), Gaps = 30/239 (12%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD--- 98
FPD +L+ +C GK EA + EM G E V Y ++D C++ + +
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGME 351
Query: 99 ---------------PFL----------LHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
PF + +A VL M V N T+N LI C
Sbjct: 352 MLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFC 411
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + + A+ L ++M E PN T+ LI L +A ++ + M GF D
Sbjct: 412 RKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVP--D 469
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
++ + F+ LC + +VE A +VF +K E Y L+ + A+ LF
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+LI+ + + A +M G + VV Y A + C R LL EAE++
Sbjct: 580 ILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR-----LL--EAEEM 632
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+V++ G+ + ++VL+ I + + A + RM + GC P+ T+ +L++ L
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIF 692
Query: 170 AARLEEGDEM-IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+EG + ++ + A++ K A ++ +T+L F M GC P
Sbjct: 693 EKYNKEGMGLDLNSTNISVDNANIWKIADFEIITML------------FEKMVEQGCVPN 740
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKE 266
+ TY L+ L + A LF+ + G ++P E
Sbjct: 741 VNTYSKLIKGLCKVEHLSLAFRLFNHMKESG--ISPSE 776
>Medtr7g085100.1 | PPR containing plant-like protein | HC |
chr7:32903829-32906178 | 20130731
Length = 585
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 16/232 (6%)
Query: 41 IFP-DEAMCDMLIKGWC-VDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
+FP D ++++ GWC + A R+ EM + + VV+Y +++ C + +
Sbjct: 267 VFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYR 326
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
L + +K R + + + +N +I +L K R ++A+ L +M + P+
Sbjct: 327 VLQLFEQMKK-------RNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAI 379
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV-EHALKVF 217
T+ LI+ L +A +++E E+ + M G S+ + ++ F IL RV E ++
Sbjct: 380 TYNSLIKPLCKARKIDEAKEIFNVMLERGISPSI--RTFHAFFRIL----RVKEEVFELL 433
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
MK GC P I+TY +L+ K ++D+ +++ + G+ Y V
Sbjct: 434 DKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIV 485
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I PD + + +I + ++EA L +M + YN+++ +C+ R+ D
Sbjct: 337 RNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCK-ARKID 395
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
EA+++ M RG+ ++ TF+ L R E+ +L +M E GC P
Sbjct: 396 ------EAKEIFNVMLERGISPSIRTFHAFFRIL---RVKEEVFELLDKMKELGCNPTIE 446
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T+++LIR + +L+E + + M+ G G D+ +Y + L +VE A K +
Sbjct: 447 TYIMLIRKFCRWRQLDEVKRIWNAMREDGIGH--DRSSYIVLIHGLFLNCKVEEAYKYYI 504
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVD-KANALFHEAQSRG 259
M+ G P KT +L + L D +A L H G
Sbjct: 505 EMQEKGFLPEPKTESMLQAWLSGRQVTDSQATDLEHNQLEHG 546
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 26 FASYAERMVKDLARVIF--------PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFE 77
F+ RMVK+ +I PD + LIK C K++EA+ + M G
Sbjct: 351 FSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGIS 410
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
+ ++A + R K+ E ++L +M G +ET+ +LI C+ R+
Sbjct: 411 PSIRTFHAFF----RILRVKE------EVFELLDKMKELGCNPTIETYIMLIRKFCRWRQ 460
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
++ ++++ M E G + ++++VLI L+ ++EE + M+ GF
Sbjct: 461 LDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGF 511
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 98/219 (44%), Gaps = 11/219 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
++I+ +C + A R F++G+ + +L LCR K+ +AE +
Sbjct: 208 IMIRKYCAVHDVGRAINTFYAFKRFNFQVGLYEFQGLLSA---LCRYKNV----QDAEHL 260
Query: 110 LVEMDYRGVPRNVETFNVLITNLCK-IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
L + P + ++FN+++ C I +A +++ M + + ++ +I
Sbjct: 261 LF-CNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYS 319
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
++++L ++ ++MK D+K Y + L V+ A+ + M+ + P
Sbjct: 320 KSSKLYRVLQLFEQMKKRNITP--DRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPD 377
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
TY+ L+ L ++D+A +F+ RG++ + + +
Sbjct: 378 AITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTF 416
>Medtr1g086500.1 | PPR containing plant-like protein | HC |
chr1:38701697-38699329 | 20130731
Length = 518
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 16/258 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
DYG+ ++ LC + + A + L P+ ++L+ GW +E+
Sbjct: 162 DYGV----NCFNALLRTLCQEKSMTDARNVYHSLKHNFRPNLQTFNILLSGW---KNVED 214
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A EM G E VV YN+++D C+ R+ + +A KV EM + + +V
Sbjct: 215 AELFVNEMKEMGVEPDVVTYNSLVDVYCK-GREIE------KAYKVFDEMREKDLSPDVI 267
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+ +I L + + + A + M E+G YP+ + IR+ A RL E++D M
Sbjct: 268 TYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAFELVDEM 327
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+ G S + Y F + ++ + ++ M +GC P ++ L+ H
Sbjct: 328 VNKGL--SPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHE 385
Query: 244 RVDKANALFHEAQSRGLA 261
+++ A L+ E +G
Sbjct: 386 KMEMALQLWGEMVEKGFG 403
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 103/254 (40%), Gaps = 23/254 (9%)
Query: 3 RDYGLKRDRGSLKVVVEKLC-----SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCV 57
++ G++ D + +V+ C K + + E KDL+ PD +I G +
Sbjct: 223 KEMGVEPDVVTYNSLVDVYCKGREIEKAYKVFDEMREKDLS----PDVITYTSVIGGLGL 278
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
G+ ++AR + EM G V AYNA + C R F +++ EM +G
Sbjct: 279 VGQPDKARDVLKEMKEYGVYPDVPAYNAAIRNYCIAKRLGIAF-------ELVDEMVNKG 331
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
+ N T+N+ + + L+ RM GC P + + LIR + ++E
Sbjct: 332 LSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCLPYTQSCMFLIRLFKRHEKMEMAL 391
Query: 178 EMIDRMKSAGFGA-SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP---GIKTYD 233
++ M GFG+ +L + +LC + ++ A K F M G P K
Sbjct: 392 QLWGEMVEKGFGSYTLVSDVLFD---MLCDMGKLMEAEKCFLEMIEKGQRPSNVSFKRIK 448
Query: 234 LLMSKLGAHNRVDK 247
+LM H +
Sbjct: 449 VLMELANKHEAIQN 462
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 9/198 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I+PD LI G G ++EA + EM GF AYN+++ C L R
Sbjct: 596 RGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNSLIGGFCNLGRM-- 653
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
++A KV EM RG+ + TFN++I C+ + A+ F M G P+
Sbjct: 654 -----AQALKVEKEMRLRGLLPDTFTFNIIIDRFCRQGNMKSAIDAFLDMHRIGLMPDIF 708
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
TF +L+ +A + D+++++M +G D Y + C + ++ A+ +
Sbjct: 709 TFNILVGGYCKAFDMVRADDIVNKMYP--YGLYPDITTYNIRMHGYCSVRKMNRAIAILD 766
Query: 219 MMKADGCEPGIKTYDLLM 236
+ + G P TY+ +M
Sbjct: 767 ELVSAGIVPNTVTYNTVM 784
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 105/265 (39%), Gaps = 45/265 (16%)
Query: 32 RMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
+++ DL + F D ++ DM + C G+L++A +L + G V A+N+++
Sbjct: 448 KLLTDLTEMGFFQDCSLYDMTVSWHCWAGRLDQAIKLLKDSLAMGLTFSVAAFNSLIAAY 507
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
+ F E ++V+ G + T N L+ LC+ K ++A L HRM E
Sbjct: 508 SREGLEDKAF----EIYHIMVKC---GFTPSASTCNSLLMGLCRKGKLQEARALLHRMSE 560
Query: 151 -----------------------------W------GCYPNETTFVVLIRSLYQAARLEE 175
W G YP+ F LI L +A ++E
Sbjct: 561 KGFLIKKVAYTLLFDGYFKMNDMDGARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDE 620
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
E+ M S GF + AY + C + R+ ALKV M+ G P T++++
Sbjct: 621 AYEVFLEMLSIGFVP--NNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLPDTFTFNII 678
Query: 236 MSKLGAHNRVDKANALFHEAQSRGL 260
+ + + A F + GL
Sbjct: 679 IDRFCRQGNMKSAIDAFLDMHRIGL 703
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P + C+ L+ G C GKL+EAR L M GF + VAY + D ++
Sbjct: 530 PSASTCNSLLMGLCRKGKLQEARALLHRMSEKGFLIKKVAYTLLFDGYFKMNDMDG---- 585
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A + EM RG+ +V F+ LI L K ++A ++F M G PN +
Sbjct: 586 ---ARFMWKEMKERGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFVPNNFAYNS 642
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI R+ + ++ M+ G D + + C ++ A+ F M
Sbjct: 643 LIGGFCNLGRMAQALKVEKEMRLRGLLP--DTFTFNIIIDRFCRQGNMKSAIDAFLDMHR 700
Query: 223 DGCEPGIKTYDLLM 236
G P I T+++L+
Sbjct: 701 IGLMPDIFTFNILV 714
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 9/211 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD +++I G CV G A M + G E V +N +L LCR+ +
Sbjct: 320 PDVFTYNVIINGCCVGGNTSVAVGWLRLMMKRGCEPSVSTFNTILH---SLCREGNV--- 373
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA K+ + GV N +N ++ K R A L+ M G P+ TF +
Sbjct: 374 -VEARKLFDRVLALGVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGVPPDCVTFNI 432
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+ Y+ R E+ +++ + GF D Y ++ C R++ A+K+ A
Sbjct: 433 FVGGHYKYGRQEDWTKLLTDLTEMGFFQ--DCSLYDMTVSWHCWAGRLDQAIKLLKDSLA 490
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFH 253
G + ++ L++ DKA ++H
Sbjct: 491 MGLTFSVAAFNSLIAAYSREGLEDKAFEIYH 521
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 11/228 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++ + G G+ E+ +L ++ GF Y+ + C R
Sbjct: 425 PDCVTFNIFVGGHYKYGRQEDWTKLLTDLTEMGFFQDCSLYDMTVSWHCWAGRL------ 478
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A K+L + G+ +V FN LI + + A +++H M + G P+ +T
Sbjct: 479 -DQAIKLLKDSLAMGLTFSVAAFNSLIAAYSREGLEDKAFEIYHIMVKCGFTPSASTCNS 537
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + +L+E ++ RM GF + K AY + ++ A ++ MK
Sbjct: 538 LLMGLCRKGKLQEARALLHRMSEKGF--LIKKVAYTLLFDGYFKMNDMDGARFMWKEMKE 595
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
G P + + L+ L VD+A +F E S G P +A +
Sbjct: 596 RGIYPDVVAFSALIDGLSKAGNVDEAYEVFLEMLSIGFV--PNNFAYN 641
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 9/217 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D ++ + L++G+ G EA + M G V A + L R D +
Sbjct: 216 DFSVLNTLMRGFLNVGMSLEALDILNRMRDVGVRPSVTAMTILFKL---LFRVGD----Y 268
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ +M +G + TFN +I C+ K LFH MG++GC P+ T+ V+
Sbjct: 269 GTIWSLFKDMIRKGPAPSSITFNTMICGFCRRGKVVIGESLFHLMGKFGCEPDVFTYNVI 328
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I + M G S+ + L LC V A K+F + A
Sbjct: 329 INGCCVGGNTSVAVGWLRLMMKRGCEPSV--STFNTILHSLCREGNVVEARKLFDRVLAL 386
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G P Y+ +M + +A+ L+ E + +G+
Sbjct: 387 GVVPNTAIYNTMMDGYVKARDIGRASLLYKEMRIKGV 423
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 16/274 (5%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKL 61
++ GL DR + ++ + LC G A M+ +L + D LI G+ + GK
Sbjct: 392 KESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKP 451
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EA+ L EM GF+ VVAYN + R + F EA +L M+ +GV N
Sbjct: 452 IEAQSLFKEMEERGFKPDVVAYNVL---AAGFFRNRTDF----EAMDLLNYMESQGVEPN 504
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM-- 179
T ++I LC K E+A + F+ + + + L+ +AA +E+ E+
Sbjct: 505 STTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKE 564
Query: 180 ----IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
+ M S K Y + T LC +E A +F + G P TY ++
Sbjct: 565 AFILLRTMLEMNMKPS--KVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIM 622
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++ N + +A+ LF + + RG+ Y +
Sbjct: 623 INGYCKTNCLPEAHELFKDMKERGITPDAVTYTI 656
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 10/259 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKL 61
+ +GL + + +V++ LC KG R+ ++ D++ C I+G C + +
Sbjct: 217 KSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRS 276
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ + + + AY A++ C + EAE V +EM+ +G+ +
Sbjct: 277 DLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKL-------DEAESVFLEMEKQGLVPD 329
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V + L+ C R + AL ++ M G N F ++ L + R E +M +
Sbjct: 330 VYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFE 389
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
K +G +D+KAY LC + +V+ A+ + +K+ + +K Y L++
Sbjct: 390 EFKESGL--FIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFL 447
Query: 242 HNRVDKANALFHEAQSRGL 260
+ +A +LF E + RG
Sbjct: 448 QGKPIEAQSLFKEMEERGF 466
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCEL-CRQKDPFL 101
P + M + C +G +E A L GF V Y M++ C+ C
Sbjct: 579 PSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCL------ 632
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
EA ++ +M RG+ + T+ ++I CK+ +A +LF M E G P+ +
Sbjct: 633 --PEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYT 690
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGF--GASLDK 194
V+I+ L + E ++ + M G GA+L +
Sbjct: 691 VIIKGLLNSGHTEIAFQLYNEMIDMGMTPGATLKR 725
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 33/173 (19%)
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
N+ +FN LI L K + + AL LF R +G NE T+ ++I++L + E +
Sbjct: 189 NILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVF 248
Query: 181 DRMKSAGF---------------------------------GASLDKKAYYQFLTILCGI 207
D MK AG A + K AY + C
Sbjct: 249 DEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNE 308
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+++ A VF M+ G P + Y L+ DKA A++ SRG+
Sbjct: 309 TKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGI 361
>Medtr2g048635.1 | pentatricopeptide (PPR) repeat protein | LC |
chr2:21455804-21456661 | 20130731
Length = 260
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 21/230 (9%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
+KG C++G+++ A ++ G++L + Y +++ +C+ L +AE+
Sbjct: 1 MKGLCLNGQIDNAMEFHEKLVAQGYQLDHLTYGTLINALCKRRETGAAVFLLRQAER--- 57
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMG---EWGCYPNETTFVVLIRSLY 168
V NV T+N +I +LCK + DA LF+ M P+ T+ LI +Y
Sbjct: 58 ----ENVSLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKYNTSLLPDVVTYSPLINDVY 113
Query: 169 ----------QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
+ +EE +ID M G D + F+ + + A +F
Sbjct: 114 TFGIMVEALCKEGNVEEAKIVIDEMM-VQVGVEPDVAIFNSFIDGCFPSNQPDMAKDIFD 172
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
M G P I Y +++ L RVD+A LF E +S+ + K Y
Sbjct: 173 SMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYT 222
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 9/217 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE----- 105
LI C + A L + R L VV YN ++D +C+ R D F L +E
Sbjct: 35 LINALCKRRETGAAVFLLRQAERENVSLNVVTYNPIIDSLCKENRVTDAFDLFNEMVLKY 94
Query: 106 AEKVLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDA-LKLFHRMGEWGCYPNETTFVVL 163
+L ++ Y + +V TF +++ LCK E+A + + M + G P+ F
Sbjct: 95 NTSLLPDVVTYSPLINDVYTFGIMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSF 154
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I + + + + ++ D M G ++ Y + LC I+RV+ AL +F M++
Sbjct: 155 IDGCFPSNQPDMAKDIFDSMDQRGVVPNIHN--YTMMIKGLCKIKRVDEALNLFEEMRSK 212
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P K Y ++ L R A L E +GL
Sbjct: 213 NMTPDAKIYTSIIDGLFKSGRDTCALKLVGEMHDKGL 249
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEM-YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++++ C +G +EEA+ + EM + G E V +N+ +D C Q D A+
Sbjct: 117 IMVEALCKEGNVEEAKIVIDEMMVQVGVEPDVAIFNSFIDG-CFPSNQPD------MAKD 169
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ MD RGV N+ + ++I LCKI++ ++AL LF M P+ + +I L+
Sbjct: 170 IFDSMDQRGVVPNIHNYTMMIKGLCKIKRVDEALNLFEEMRSKNMTPDAKIYTSIIDGLF 229
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKA 196
++ R +++ M G ++ K+
Sbjct: 230 KSGRDTCALKLVGEMHDKGLPTNVFTKS 257
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 13/214 (6%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
M D K C+D + R+ E G V +N ++DC C+ R HS A
Sbjct: 427 MIDTFGKYNCLDHAMATFERMLSE----GIRPDTVTWNTLIDCHCKSGR-------HSRA 475
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
E++ EM G V T+N++I ++ + E L +M G PN T+ L+
Sbjct: 476 EELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDI 535
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
++ R + E ++ +KS GF + Y + + A+ F MM A+G
Sbjct: 536 YGKSGRFNDAIECLEVLKSMGFKPT--STMYNALINAYAQRGLSDQAVNAFRMMAAEGLT 593
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P + + L++ G R +A A+ + G+
Sbjct: 594 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 10/266 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
++ GL+ + +++ G AE +V ++ + + PDE +L+ + G+
Sbjct: 308 KENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRW 367
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E AR + EM + Y+ +L + + F +VL EM GV +
Sbjct: 368 ESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSF-------QVLKEMKMSGVQPD 420
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+NV+I K + A+ F RM G P+ T+ LI ++ R +E+ +
Sbjct: 421 RHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFE 480
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M+ +G+ + Y + + ER E + + M++ G P TY L+ G
Sbjct: 481 EMQQSGYSPCV--MTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGK 538
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
R + A +S G T Y
Sbjct: 539 SGRFNDAIECLEVLKSMGFKPTSTMY 564
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 44/253 (17%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P +I G+ EA L E+ G E AYNA+L + KD
Sbjct: 279 PKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKD---- 334
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-------------- 148
AE V+ EM+ GV + T+++L+ + E A + M
Sbjct: 335 ---AEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSR 391
Query: 149 --------GEW-------------GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
GEW G P+ + V+I + + L+ +RM S G
Sbjct: 392 ILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG 451
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D + + C R A ++F M+ G P + TY+++++ +GA R ++
Sbjct: 452 IRP--DTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWER 509
Query: 248 ANALFHEAQSRGL 260
N L + QS+GL
Sbjct: 510 VNDLLSKMQSQGL 522
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 90/214 (42%), Gaps = 13/214 (6%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
M D K C+D + R+ E G V +N ++DC C+ R HS A
Sbjct: 427 MIDTFGKYNCLDHAMATFERMLSE----GIRPDTVTWNTLIDCHCKSGR-------HSRA 475
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
E++ EM G V T+N++I ++ + E L +M G PN T+ L+
Sbjct: 476 EELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDI 535
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
++ R + E ++ +KS GF + Y + + A+ F MM A+G
Sbjct: 536 YGKSGRFNDAIECLEVLKSMGFKPT--STMYNALINAYAQRGLSDQAVNAFRMMAAEGLT 593
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
P + + L++ G R +A A+ + G+
Sbjct: 594 PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 627
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 10/266 (3%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKL 61
++ GL+ + +++ G AE +V ++ + + PDE +L+ + G+
Sbjct: 308 KENGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRW 367
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
E AR + EM + Y+ +L + + F +VL EM GV +
Sbjct: 368 ESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSF-------QVLKEMKMSGVQPD 420
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
+NV+I K + A+ F RM G P+ T+ LI ++ R +E+ +
Sbjct: 421 RHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHSRAEELFE 480
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
M+ +G+ + Y + + ER E + + M++ G P TY L+ G
Sbjct: 481 EMQQSGYSPCV--MTYNIMINSMGAQERWERVNDLLSKMQSQGLLPNAVTYTTLVDIYGK 538
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEY 267
R + A +S G T Y
Sbjct: 539 SGRFNDAIECLEVLKSMGFKPTSTMY 564
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 96/253 (37%), Gaps = 44/253 (17%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P +I G+ EA L E+ G E AYNA+L + KD
Sbjct: 279 PKSGTLAAVILALGNSGRTIEAEALFEEIKENGLEPRTRAYNALLKGYVKTGSLKD---- 334
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM-------------- 148
AE V+ EM+ GV + T+++L+ + E A + M
Sbjct: 335 ---AEFVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSR 391
Query: 149 --------GEW-------------GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
GEW G P+ + V+I + + L+ +RM S G
Sbjct: 392 ILASYRDKGEWQKSFQVLKEMKMSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEG 451
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D + + C R A ++F M+ G P + TY+++++ +GA R ++
Sbjct: 452 IRP--DTVTWNTLIDCHCKSGRHSRAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWER 509
Query: 248 ANALFHEAQSRGL 260
N L + QS+GL
Sbjct: 510 VNDLLSKMQSQGL 522
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKL 61
+ YG+ + + +++ LC G AE + ++ + F P L+K + K
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKA 756
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++ ++ ++ G EL + YN ++ C L + +A+ VL EM RG+ +
Sbjct: 757 DKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTR-------KAKVVLDEMVKRGISAD 809
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA----RLEEGD 177
+ T+N LI C E ALK + +M G PN TT+ L+ L A +EE +
Sbjct: 810 LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETE 869
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM---MKADGCEPGIKTYDL 234
+++ M G + A Y L + G RV + K + M G P +KTY++
Sbjct: 870 KLVSEMNERGL---VPNAATYDIL--VSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNV 924
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVD 270
L+S ++ +A L ++ ++G P + D
Sbjct: 925 LISDYAKSGKMIEARELLNDLLTKGR--IPNSFTYD 958
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 105/234 (44%), Gaps = 13/234 (5%)
Query: 30 AERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A ++ D+ ++ I PD LI G+ +G A + EM VVAYNA++
Sbjct: 585 ARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIK 644
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ L + DP + S ++E+ G+ + T+N +I C KTEDAL + + M
Sbjct: 645 GLLRLGKY-DPRYVCSR----MIEL---GLAPDCITYNTIINTYCIKGKTEDALDILNEM 696
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT-ILCGI 207
+G PN T+ +LI L + +E+ + +D M F + ++FL
Sbjct: 697 KSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEF---VPTPITHKFLVKAYSRS 753
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
E+ + L++ + A G E + Y+ L++ KA + E RG++
Sbjct: 754 EKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGIS 807
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 31/273 (11%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D + V+ C KG ++ ++ R + D C++L+KG+C G ++ A +
Sbjct: 161 DNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVM 220
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRNVETFNV 127
+ GG V+ N ++D CE L S+A + L+E +R V ++ T+N
Sbjct: 221 YNLVDGGVTKDVIGLNTLIDGYCEAG-------LMSQATE-LIENSWRSDVKIDIVTYNT 272
Query: 128 LITNLCKIRKTEDALKLFHR-MGEW------------------GCYPNETTFVVLIRSLY 168
L+ CK A LF+ +G W P T+ LI +
Sbjct: 273 LLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYC 332
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ +EE + +M G D L C ++ A +F M G +P
Sbjct: 333 KFVGVEESHSLYKKMIMNGIMP--DVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPN 390
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+Y +++ L RV +A L + RG++
Sbjct: 391 HVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL + S ++ L G A + + R I D C ++ G GK +EA
Sbjct: 386 GLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEA 445
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + + V Y+A+LD C+L + + AE VL +M+ VP NV T
Sbjct: 446 EEVFETILKLNLAPNCVTYSALLDGYCKLGKME-------LAELVLQKMEKEHVPPNVIT 498
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
F+ +I K A+ + M + PN + +LI ++A + D+ MK
Sbjct: 499 FSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMK 558
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
S S + L L + R++ A + M + G +P I Y L+
Sbjct: 559 SRRLEES--NVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLI 608
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 110/286 (38%), Gaps = 53/286 (18%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEA 64
GL D + ++V+ C G YAE ++ +L + D + LI G+C G + +A
Sbjct: 192 GLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQA 251
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---ELCRQKDPF--------------------- 100
L +R ++ +V YN +L C +L R + F
Sbjct: 252 TELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQ 311
Query: 101 ---------------LLHSEAEKVLVE--------MDYRGVPRNVETFNVLITNLCKIRK 137
L+ + + V VE M G+ +V T + ++ C+ K
Sbjct: 312 NEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
+A LF M E G PN ++ +I SL+++ R+ E + +M G S D
Sbjct: 372 LTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI--SFDIVTC 429
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS---KLG 240
+ L + + + A +VF + P TY L+ KLG
Sbjct: 430 TTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLG 475
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 104/280 (37%), Gaps = 25/280 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
G+ D S+ V+V LC G A +++ V+ D + +I G+C G +++
Sbjct: 124 GVVPDVFSVNVLVHSLCKVGDLDLALGYLRN-NDVVDIDNVTYNTVIWGFCQKGLVDQGF 182
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
L EM + G + N ++ C + L AE V+ + GV ++V
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIG-------LVQYAEWVMYNLVDGGVTKDVIGL 235
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI----- 180
N LI C+ A +L + T+ L+++ + L + +
Sbjct: 236 NTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILG 295
Query: 181 -----DRMKSAGFGASLDKK-------AYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
DR+K+ + K Y + C VE + ++ M +G P
Sbjct: 296 FWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPD 355
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ T ++ H ++ +A LF E GL YA
Sbjct: 356 VVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYA 395
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 11/253 (4%)
Query: 13 SLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEM 71
+ ++ KG S A +++++ R + P+ + +LI G+ G+ + A EM
Sbjct: 498 TFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEM 557
Query: 72 YRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITN 131
E V ++ +L+ + + R EA ++++M +G+ ++ + LI
Sbjct: 558 KSRRLEESNVIFDILLNNLKRVGRM-------DEARSLIIDMYSKGIDPDIVNYASLIDG 610
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
K AL + M E + + LI+ L + + + + RM G
Sbjct: 611 YFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAP- 668
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
D Y + C + E AL + MK+ G P TY++L+ L V+KA +
Sbjct: 669 -DCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESA 727
Query: 252 FHEAQSRGLAVTP 264
E TP
Sbjct: 728 LDEMLVMEFVPTP 740
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%), Gaps = 11/219 (5%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD-CVCELCRQKDPFLLHSEAEK 108
++IKG C G L ++ +L G M + G VV Y ++D C C+ D L A+K
Sbjct: 169 IMIKGCCEAGDLMKSFQLLGMMEKTGLSPNVVIYTTLIDGC----CKNGDVHL----AKK 220
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ +M + N T++VLI K ++ +++ M G PN T+ +I
Sbjct: 221 LFCKMKGLDLVANQHTYSVLINGFFKQGLQKEGFQMYESMKLSGIVPNVYTYSSVIGEYC 280
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+++ + D M+ S+ Y + LC ++++ A+K+F + G P
Sbjct: 281 NDGSIDKAFNVFDEMREKDIACSI--MTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPN 338
Query: 229 IKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
I TY+ L+ ++D A L++E +S GL+ T Y
Sbjct: 339 IFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTY 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 16/273 (5%)
Query: 1 MERDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDG 59
M GL + +++ C G A+++ + + + ++ +LI G+ G
Sbjct: 189 MMEKTGLSPNVVIYTTLIDGCCKNGDVHLAKKLFCKMKGLDLVANQHTYSVLINGFFKQG 248
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
+E ++ M G V Y++++ E C +A V EM + +
Sbjct: 249 LQKEGFQMYESMKLSGIVPNVYTYSSVIG---EYCNDGSI----DKAFNVFDEMREKDIA 301
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
++ T+N+LI LC+++K +A+KLF+R+ G PN T+ LI+ A +++ +
Sbjct: 302 CSIMTYNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVRL 361
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEH---ALKVFAMMKADGCEPGIKTYDLLM 236
+ +KS G ++ + T++ G +V + AL + M+ P TY +L+
Sbjct: 362 YNELKSNGLSPTV-----VTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILL 416
Query: 237 SKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ N ++KA + + GL Y V
Sbjct: 417 NGFVRINYMEKAFEIHSLMEKSGLVSDVYTYGV 449
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 13/238 (5%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
K F + E KD+A I ++LI G C KL EA +L + R G + Y
Sbjct: 287 KAFNVFDEMREKDIACSIMT----YNLLINGLCRMKKLGEAVKLFYRVNRVGLRPNIFTY 342
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
N ++ C+ + L++E + G+ V T+N LI K+ AL
Sbjct: 343 NTLIKGYCDAEKIDTAVRLYNELKS-------NGLSPTVVTYNTLIAGYSKVGNLAGALN 395
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
L M E P + T+ +L+ + +E+ E+ M+ +G + D Y +
Sbjct: 396 LVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEKSGLVS--DVYTYGVLIHG 453
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
LC ++ A K+F + EP YD L+ +A L +E +G+
Sbjct: 454 LCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRALRLLNEMIGKGMV 511
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 22/237 (9%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL+ + + +++ C A R+ +L + + P + LI G+ G L A
Sbjct: 334 GLRPNIFTYNTLIKGYCDAEKIDTAVRLYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGA 393
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM V Y +L+ + + F +HS EK G+ +V T
Sbjct: 394 LNLVKEMEERNIAPTKVTYTILLNGFVRINYMEKAFEIHSLMEK-------SGLVSDVYT 446
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR------SLYQAARLEEGDE 178
+ VLI LC ++A KLF + E PN + LI + Y+A RL +E
Sbjct: 447 YGVLIHGLCMNGSMKEASKLFKSLDELNMEPNSVIYDTLIHGYCKEGNCYRALRLL--NE 504
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
MI G G + ++ + +LC E+++ A V M G +P + Y+++
Sbjct: 505 MI------GKGMVPNVASFCSTIGLLCKDEKLKEAEVVLQHMVNLGLKPSVSLYNMV 555
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 13/232 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
E M++D + P+E ++LI+ WC +LEEA + +M G + +V YN +
Sbjct: 172 EMMIQD--GNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDY--RGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ + AE+++++M V N T ++I CK +AL+ ++M
Sbjct: 230 AQNGETDN-------AERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKM 282
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
E G +PN F LI+ + +E + M+ FG D Y +
Sbjct: 283 KELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEE--FGIKPDVVTYSTIMNAWSSSG 340
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+++ ++F M EP I+ Y +L + DKA AL + GL
Sbjct: 341 LMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGL 392
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK EA + + G + ++ Y ++ + L R + +L +++ GV
Sbjct: 57 GKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKR-------FNSIPSLLSKVEENGV 109
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ FN +I K +A+K+F +M E GC P +TF LI+ R E +
Sbjct: 110 KPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMK 169
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+++ M G +++ Y + C +E A V M G +P I TY+ L
Sbjct: 170 LLEMMIQDG-NVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKE 266
+ D A L + Q V P E
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNE 256
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV---IFPDEAMCDMLIKGWCVDGK 60
+ G++ D + + G AER++ + + + P+E C ++I+G+C +G
Sbjct: 212 NSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGN 271
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+ EA R +M G V +N+++ ++ E+ L M+ G+
Sbjct: 272 MTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDG-------VEEALTLMEEFGIKP 324
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T++ ++ ++ ++F M + P+ + +L + +A + ++ + ++
Sbjct: 325 DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALL 384
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+ M G A++ + ++ C +++ AL+++ M G +KTY+ L+ G
Sbjct: 385 NSMTKYGLQANV--VIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYG 442
Query: 241 AHNRVDKANALFHEAQSRGLA 261
+ KA L + G+A
Sbjct: 443 EAKQPWKAEELLVTMEESGVA 463
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 8/214 (3%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
K F S + K + PD + + +I + GK+ EA ++ +M G + +
Sbjct: 92 KRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTF 151
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRNVETFNVLITNLCKIRKTEDAL 142
N ++ + R EA K+L M G V N T+N+LI C + E+A
Sbjct: 152 NTLIKGFGIVGRPH-------EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAW 204
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
+ H+M G P+ T+ L R+ Q + + +I +M+ +++ +
Sbjct: 205 NVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIR 264
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
C + AL+ MK G P ++ L+
Sbjct: 265 GYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLI 298
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 13/232 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
E M++D + P+E ++LI+ WC +LEEA + +M G + +V YN +
Sbjct: 172 EMMIQD--GNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDY--RGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
+ + AE+++++M V N T ++I CK +AL+ ++M
Sbjct: 230 AQNGETDN-------AERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKM 282
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
E G +PN F LI+ + +E + M+ FG D Y +
Sbjct: 283 KELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEE--FGIKPDVVTYSTIMNAWSSSG 340
Query: 209 RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+++ ++F M EP I+ Y +L + DKA AL + GL
Sbjct: 341 LMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGL 392
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 8/208 (3%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGV 118
GK EA + + G + ++ Y ++ + L R + +L +++ GV
Sbjct: 57 GKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKR-------FNSIPSLLSKVEENGV 109
Query: 119 PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+ FN +I K +A+K+F +M E GC P +TF LI+ R E +
Sbjct: 110 KPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMK 169
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+++ M G +++ Y + C +E A V M G +P I TY+ L
Sbjct: 170 LLEMMIQDG-NVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 228
Query: 239 LGAHNRVDKANALFHEAQSRGLAVTPKE 266
+ D A L + Q V P E
Sbjct: 229 FAQNGETDNAERLILKMQQYNNKVKPNE 256
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV---IFPDEAMCDMLIKGWCVDGK 60
+ G++ D + + G AER++ + + + P+E C ++I+G+C +G
Sbjct: 212 NSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGN 271
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
+ EA R +M G V +N+++ ++ E+ L M+ G+
Sbjct: 272 MTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDG-------VEEALTLMEEFGIKP 324
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T++ ++ ++ ++F M + P+ + +L + +A + ++ + ++
Sbjct: 325 DVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALL 384
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLG 240
+ M G A++ + ++ C +++ AL+++ M G +KTY+ L+ G
Sbjct: 385 NSMTKYGLQANV--VIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYG 442
Query: 241 AHNRVDKANALFHEAQSRGLA 261
+ KA L + G+A
Sbjct: 443 EAKQPWKAEELLVTMEESGVA 463
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 87/214 (40%), Gaps = 8/214 (3%)
Query: 24 KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
K F S + K + PD + + +I + GK+ EA ++ +M G + +
Sbjct: 92 KRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTF 151
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-VPRNVETFNVLITNLCKIRKTEDAL 142
N ++ + R EA K+L M G V N T+N+LI C + E+A
Sbjct: 152 NTLIKGFGIVGRPH-------EAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAW 204
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
+ H+M G P+ T+ L R+ Q + + +I +M+ +++ +
Sbjct: 205 NVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIR 264
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
C + AL+ MK G P ++ L+
Sbjct: 265 GYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLI 298
>Medtr2g103520.1 | PPR containing plant-like protein | HC |
chr2:44573560-44569817 | 20130731
Length = 822
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 43/302 (14%)
Query: 4 DYGLKR--DRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGK 60
D+GL D S+ +VV+ LC G +++ D P+ +++I G+C G
Sbjct: 196 DHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGD 255
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L+ A R+ E+ GF + Y A++D C+ + +++L EM+ G+
Sbjct: 256 LKRATRVFEELKLKGFLPTLETYGALIDGFCKAGK-------FQVVDQLLNEMNVMGLNV 308
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
NV+ FN +I K + A ++ M E GC P+ TT+ +LI R++E +E +
Sbjct: 309 NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFL 368
Query: 181 DR---------------------------------MKSAGFGASLDKKAYYQFLTILCGI 207
+R K A G D +Y F+
Sbjct: 369 ERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAG 428
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
++ AL V M G P + Y++LMS L R A L E L Y
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMY 488
Query: 268 AV 269
A
Sbjct: 489 AT 490
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 98/245 (40%), Gaps = 47/245 (19%)
Query: 15 KVVVEKLCSKG----FASYAERM-VKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAG 69
V+++ LC G SY +M + + A PDE +I G+ L+ A ++ G
Sbjct: 524 NVMIKGLCKCGKMTDAVSYVNKMKIANHA----PDEYTHSTVIDGYVKQHDLDSALKMFG 579
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
+M + ++ VVAY ++++ C++ S AEKV M + NV T+ +LI
Sbjct: 580 QMMKQKYKPNVVAYTSLINGFCKIADM-------SRAEKVFRAMQSFNLEPNVVTYTILI 632
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR---LEEGDEMIDRMKSA 186
K K E A F M C PN+TTF LI L L E +E DR
Sbjct: 633 GGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDR---- 688
Query: 187 GFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
L FA M ++G I TY+ ++ L H VD
Sbjct: 689 ------------------------SLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVD 724
Query: 247 KANAL 251
A L
Sbjct: 725 TAQLL 729
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 35 KDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELC 94
K + + +FPD + ++L+ G C G+ A+ L EM + Y ++D
Sbjct: 440 KMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVD------ 493
Query: 95 RQKDPFLLHSEAEKV--LVEMDY-RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
F+ ++E +K L E+ +G+ V +NV+I LCK K DA+ ++M
Sbjct: 494 ----GFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIA 549
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVE 211
P+E T +I + L+ +M +M + ++ AY + C I +
Sbjct: 550 NHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV--VAYTSLINGFCKIADMS 607
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
A KVF M++ EP + TY +L+ + +KA + F
Sbjct: 608 RAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFF 648
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 12/196 (6%)
Query: 78 LGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
L VAY+++L + + + L SE E VL +M R +E N +I +
Sbjct: 91 LNNVAYSSLLKLMVK-------YRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGF 143
Query: 138 TEDALKLFHRMGE-WGCYP----NETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
+ A+K+F+ + E + C+P N + L+++ E D+M++R G +
Sbjct: 144 VDKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVV 203
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
D + + LC + +VE K+ +GC P + Y++++ + +A +F
Sbjct: 204 DNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVF 263
Query: 253 HEAQSRGLAVTPKEYA 268
E + +G T + Y
Sbjct: 264 EELKLKGFLPTLETYG 279
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 38 ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQK 97
A I PD ++L+ G+C DG+++EA+ + M + + VV Y++++D C +
Sbjct: 62 AENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYCLINEV- 120
Query: 98 DPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
++A+++ M RGV NV+++ +I CKI+ ++A+ LF M N
Sbjct: 121 ------NKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKIIRNV 174
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL 214
+ LI L ++ R+ +++D M G ++ Y L LC RV+ A+
Sbjct: 175 LIYSFLIDGLCKSGRISYALKLVDEMHDRGQPPNI--VIYSSILDALCKNHRVDQAI 229
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 9/178 (5%)
Query: 83 YNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDAL 142
Y ++D +C+ D F L+SE M + + +V T+N LI+ + K DA+
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSE-------MVAKRIGLDVFTYNALISGFSAVSKLNDAI 54
Query: 143 KLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLT 202
LF++M P+ TF +L+ + R++E ++ M + Y +
Sbjct: 55 GLFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRV--VTYSSLMD 112
Query: 203 ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
C I V A ++F M A G +++Y +++ VD+A LF E + R +
Sbjct: 113 GYCLINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEMRCRKI 170
>Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29078320-29079032 | 20130731
Length = 190
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M +GG +YN M++ C++ + EA + +M + + NV T+ LI
Sbjct: 1 MAQGGVNPDTQSYNIMINGFCKIKKV-------DEAMNLFKKMHCKNIIPNVVTYTSLID 53
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF-- 188
LCK K ALKL M + G P+ T+ ++ +L + ++++ ++ ++K F
Sbjct: 54 GLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFED 113
Query: 189 ----GASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
G +LD AY + C AL + + M+ +GC P KTY++++ L +
Sbjct: 114 LFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDE 173
Query: 245 VDKANALFHEAQSRGL 260
D A L E +RGL
Sbjct: 174 NDMAEKLLREMIARGL 189
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C A + K + + I P+ LI G C GK+ A
Sbjct: 5 GVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCR-QKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
+L EM+ G ++ Y+++LD +C+ + K LL ++V ++ +G +V
Sbjct: 65 LKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVY 124
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ V+I C +AL L +M + GC P+ T+ ++I SL++ + ++++ M
Sbjct: 125 AYTVMIQGFCVKGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 184
Query: 184 KSAGF 188
+ G
Sbjct: 185 IARGL 189
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 46/293 (15%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV---------------------------KD 36
D GLK D +V LCS G+ A +V KD
Sbjct: 178 DSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKKD 237
Query: 37 LARVI---------FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML 87
A I PD ++L+ C + ++EA RL M R G + +YN +L
Sbjct: 238 KAEAIRGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETMERSGMA-DLYSYNELL 296
Query: 88 DCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR 147
C+ + +L ++ +M +GV V ++N +I CK+R+TE A +L+
Sbjct: 297 KAFCKAYQVDRAYLY------MVNKMQSKGVCDAV-SYNTIIVAFCKVRRTERAYELYEE 349
Query: 148 MGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
M G P+ TF VLI++ + ++++ MK+ D Y + C
Sbjct: 350 MCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVEMKAMRIVP--DVIFYTTVVDHQCKS 407
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
++ A VF M +G P + +Y+ +++ +RV A L+ E Q +GL
Sbjct: 408 GNIDKAYGVFCDMVENGVSPDVVSYNAIINGFCKASRVMGAWRLYEEMQVKGL 460
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 6 GLKRDRGSLKVVVEKLCS-KGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G K D S ++++ LC K F K + + PD +C L+ G C G ++ A
Sbjct: 145 GRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCAALVVGLCSGGYVDLA 204
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L + GG E+ + YNA++ ++ ++ +AE + M G ++ T
Sbjct: 205 YELVVGVISGGVEVNCLVYNALIHGFYKMGKK-------DKAEAIRGFMSKNGCAPDLVT 257
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD-EMIDRM 183
+N+L+ C ++A +L M G + ++ L+++ +A +++ M+++M
Sbjct: 258 YNILLNYGCDEVTVDEAERLVETMERSG-MADLYSYNELLKAFCKAYQVDRAYLYMVNKM 316
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+S G D +Y + C + R E A +++ M G +P + T+ +L+
Sbjct: 317 QSKGV---CDAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKG 373
Query: 244 RVDKANALFHEAQS 257
+ AN L E ++
Sbjct: 374 GSNVANKLLVEMKA 387
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 8/185 (4%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D S ++ C A + +++ R I PD +LIK + G A +L
Sbjct: 323 DAVSYNTIIVAFCKVRRTERAYELYEEMCRKGIQPDVVTFTVLIKAFLRKGGSNVANKLL 382
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
EM V+ Y ++D C+ + +A V +M GV +V ++N +
Sbjct: 383 VEMKAMRIVPDVIFYTTVVD---HQCKSGNI----DKAYGVFCDMVENGVSPDVVSYNAI 435
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
I CK + A +L+ M G P+E TF +++ L Q ++ E + D+M GF
Sbjct: 436 INGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEAYRVWDQMMEKGF 495
Query: 189 GASLD 193
+ D
Sbjct: 496 TLNGD 500
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 9/178 (5%)
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLC 133
GF L Y+ + +C + FLL E +L +MD G+ ++ FN+ + LC
Sbjct: 74 NGFSLTPFTYSRFITALCSV----KNFLL---IESLLRDMDDLGIVPDIWAFNIYLNILC 126
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + E AL+LF M G P+ ++ ++I +L + R +E + ++ +G D
Sbjct: 127 RENRLETALQLFQTMPLKGRKPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKP--D 184
Query: 194 KKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
K + LC V+ A ++ + + G E Y+ L+ + DKA A+
Sbjct: 185 FKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKKDKAEAI 242
>Medtr5g045490.1 | PPR containing plant-like protein | HC |
chr5:19957328-19961582 | 20130731
Length = 691
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 13/217 (5%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LIK +CV+G L EA + EM + G + YN ++D C+ R + EAE +
Sbjct: 325 LIKSFCVEGLLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVE-------EAEGLF 377
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
VEM +G+ TFN+L+ + + + L M ++G PN ++ LI + +
Sbjct: 378 VEMKAKGIKPTAVTFNILMYAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQ 437
Query: 171 ARLEE-GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
++ + + +MK G + +Y + E A VF M +G +P I
Sbjct: 438 KKMSDMAADAFLKMKKVGIKPT--SHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSI 495
Query: 230 KTYDLLMS---KLGAHNRVDKANALFHEAQSRGLAVT 263
+TY L+ ++G + K L + +G VT
Sbjct: 496 ETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKGTQVT 532
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 11/231 (4%)
Query: 41 IFPDEAMCDMLIKGWCVDG-KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDP 99
+ PD C ++I G G ++A + +M + G G A+ A++ C
Sbjct: 279 VLPDHVTCSIMIIGMRKLGHSAKDAWQFFEKMNQKGVRWGKEAFGALIKSFCVEG----- 333
Query: 100 FLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
L SEA + EM+ +G+ N +N L+ CK + E+A LF M G P T
Sbjct: 334 --LLSEALIIQSEMEKKGISSNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVT 391
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV-EHALKVFA 218
F +L+ + + + + + ++ MK FG + +Y ++ +++ + A F
Sbjct: 392 FNILMYAYSRRMQPKIVESLLAEMKD--FGLKPNANSYTCLISAYGRQKKMSDMAADAFL 449
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
MK G +P +Y ++ +KA A+F G+ + + Y
Sbjct: 450 KMKKVGIKPTSHSYTAMIHAYSVSGWHEKAYAVFENMIREGIKPSIETYTT 500
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 115 YRGVP-----RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI---RS 166
+R +P RNV +N I+ L + +DA K++ M G P+ T ++I R
Sbjct: 236 FRNLPSSKEFRNVRVYNAAISGLLYDGRYKDAWKVYESMETDGVLPDHVTCSIMIIGMRK 295
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
L +A+ + + ++M G K+A+ + C + AL + + M+ G
Sbjct: 296 LGHSAK--DAWQFFEKMNQK--GVRWGKEAFGALIKSFCVEGLLSEALIIQSEMEKKGIS 351
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
Y+ LM NRV++A LF E +++G+ T + +
Sbjct: 352 SNAIVYNTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNI 394
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 12/271 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKL 61
+D LK + S+ +++E G +++ + A FP + ++I C ++
Sbjct: 886 QDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRV 945
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
+ R + EM GF+ + +N++L + ++ +++ + G+ +
Sbjct: 946 RDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDA-------GLAPD 998
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
ET+N LIT C+ + E+ L L H+M G P T+ +I + + ++ +E+ +
Sbjct: 999 EETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFE 1058
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
++S G+ LD+ Y+ + + + A + +MK G EP T LLM G
Sbjct: 1059 ELRSNGY--KLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGK 1116
Query: 242 HNRVDKANALFHEAQSRG--LAVTPKEYAVD 270
+ ++A+ + ++ G L P +D
Sbjct: 1117 SGQPEEADRILKNLRTMGAVLDTLPYSSVID 1147
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 10/236 (4%)
Query: 25 GFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAY 83
GFA AE + + L F PD + L+ + +G E+ R ++ EM + GF + Y
Sbjct: 385 GFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTY 444
Query: 84 NAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALK 143
N ++ + R H EA ++ +M G + T+ VLI L K K E+A K
Sbjct: 445 NTIIHMYGKHGR-------HDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 144 LFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTI 203
+ M + G P T+ LI + + R E +E +RM+ +G A D AY L
Sbjct: 498 VMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKA--DHLAYSVMLDF 555
Query: 204 LCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
++ A ++ M G P Y++++ L N D + + + G
Sbjct: 556 FLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMGDVIERVVQDTKELG 611
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L E+ + G ++ YN ++ C ++ EA V M+ ++
Sbjct: 320 AIELLDEVGKFGLRPDIITYNTLISA----CSRESNL---KEAIGVFSHMESNRCQPDLW 372
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
T+N +I+ + A LF ++ G P+ T+ L+ + + E+ ++ + M
Sbjct: 373 TYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEM 432
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
GFG D+ Y + + R + AL+++ MK+ G P TY +L+ LG +
Sbjct: 433 VKMGFGK--DEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKAS 490
Query: 244 RVDKANALFHEAQSRGLAVTPKEYA 268
++++A+ + E G+ T Y+
Sbjct: 491 KIEEASKVMSEMLDAGVKPTLHTYS 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG- 176
+ V+ +N ++ + E ++F+ M E GC P+ +F LI + ++ G
Sbjct: 260 IADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGL 319
Query: 177 -DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
E++D + FG D Y ++ ++ A+ VF+ M+++ C+P + TY+ +
Sbjct: 320 AIELLDEV--GKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAM 377
Query: 236 MSKLGAHNRVDKANALFHEAQSRGLA 261
+S G KA LF + +S G +
Sbjct: 378 ISVYGRCGFALKAEHLFEKLKSNGFS 403
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 91/227 (40%), Gaps = 9/227 (3%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + LI + L+EA + M + + YNAM+ V C F L
Sbjct: 334 PDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMI-SVYGRC----GFAL 388
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+AE + ++ G + T+N L+ K TE + M + G +E T+
Sbjct: 389 --KAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNT 446
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
+I + R +E + MKS+G D Y + +L ++E A KV + M
Sbjct: 447 IIHMYGKHGRHDEALRLYRDMKSSGRNP--DAVTYTVLIDLLGKASKIEEASKVMSEMLD 504
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
G +P + TY L+ R +A F+ + G+ Y+V
Sbjct: 505 AGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSV 551
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 14/219 (6%)
Query: 42 FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFL 101
+P+ + LI C G +++ L M E VV NA+++ +C++ R
Sbjct: 234 WPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRV----- 288
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
A + EM +G+ N T+ LI+ C + A++ F M GC P+ +
Sbjct: 289 --DSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYY 346
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
LI SL A R++ + ++K G G LD+ YY L+ +++E ++ M+
Sbjct: 347 SLISSLTIARRMD-----LSQLKQVGLG--LDRTCYYALLSGFRKKKKLEQVSEMLNKME 399
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+P TY+ L+S LG A + E G
Sbjct: 400 EIEVKPDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGF 438
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 16/257 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAM-CDMLIKGWCVDGKLE 62
++G+ D L + LC K A +++ + ++ EA C++L++G +
Sbjct: 105 EHGVFPDMFQLMDFISVLCYKRKNCVAWELLRAVKKLGGTVEATSCNVLLRGLGSQNDIR 164
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF---------LLHSEAEKVLVEM 113
+L EM V+ ++ ++D +C+ R + L E ++L +
Sbjct: 165 SMYKLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLRGTLQSWEGRRLLSLL 224
Query: 114 DYRGVPR----NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ V + N+ T+N LI LCK + +LF RM E P+ T L+ + +
Sbjct: 225 EEMKVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCK 284
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
R++ E + MK G + Y ++ CG+ + A++ F M + GC P
Sbjct: 285 IGRVDSAVEFFNEMKGKGLEG--NAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDT 342
Query: 230 KTYDLLMSKLGAHNRVD 246
Y L+S L R+D
Sbjct: 343 IVYYSLISSLTIARRMD 359
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR----MGEW------------ 151
K+L EMD + NV TF++LI +LCK R+T++AL +F + + W
Sbjct: 168 KLLAEMDEMEIRPNVLTFDILIDHLCKARRTDEALGVFDKLRGTLQSWEGRRLLSLLEEM 227
Query: 152 ----GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
+PN T+ LI L +A +++ E+ RM D + +C I
Sbjct: 228 KVEKKNWPNIVTYNCLIDWLCKAGNVDKTHELFSRMNEEQVEP--DVVTLNALVNGMCKI 285
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
RV+ A++ F MK G E TY L+S N + KA F E S G
Sbjct: 286 GRVDSAVEFFNEMKGKGLEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSG 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + L+ G A ++ EM GFE V AY A++ C +K+
Sbjct: 405 PDTVTYNTLVSYLGKAGDSATATKMMKEMIEEGFEPSVFAYGAIIHAYC---LKKNV--- 458
Query: 103 HSEAEKVLVEMDYRGVPR-NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFV 161
EA K+ EM + R N+ + +LI LCK E A+ L M PN T +
Sbjct: 459 -GEAMKIFEEMCSTSMVRPNIVIYTILIDALCKTNNVEKAVSLMGDMKLKSVRPNTTIYN 517
Query: 162 VLIRSLYQAARLEEGDEMIDRM 183
V+++ L+ L + E++DRM
Sbjct: 518 VILKGLWDKRMLHKAFELMDRM 539
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 6/212 (2%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++LI+G+C + ++E EM + VV YN ++D +C + K L
Sbjct: 224 PDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNL 283
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+ K + + +V T+ LI C+ ++ ++AL + M G PN T+
Sbjct: 284 VNGMSK-----KCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNT 338
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ L +A + ++ E++++MK G G+ D + + C ++ A KVF MK
Sbjct: 339 LIKGLCEAQKWDKMKEILEQMKGDG-GSIPDACTFNTLINSHCCAGNLDEAFKVFENMKK 397
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+Y +L+ L KA LF E
Sbjct: 398 LEVSADSASYSVLIRTLCQKGDYGKAEMLFDE 429
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ LI+ + G +E+ +L M G GVV +N++L + + R + A++
Sbjct: 159 NSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRT-------NMAKE 211
Query: 109 VLVEM-DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
V EM GV + T+N+LI CK ++ F M + C P+ T+ L+ L
Sbjct: 212 VYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGL 271
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
+A +++ +++ M S D Y + C + V+ AL + M G +P
Sbjct: 272 CRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKP 331
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
I TY+ L+ L + DK + + + G ++
Sbjct: 332 NIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSI 366
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARV---IFPDEAMCDMLIKGWCVDGKLEEARR 66
D + +V+ LC G A +V +++ + PD LI+G+C +++EA
Sbjct: 260 DVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALD 319
Query: 67 LAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEM--DYRGVPRNVET 124
+ EM G + +V YN ++ +CE QK + +++L +M D +P + T
Sbjct: 320 ILEEMNGRGLKPNIVTYNTLIKGLCE--AQK-----WDKMKEILEQMKGDGGSIP-DACT 371
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
FN LI + C ++A K+F M + + ++ VLIR+L Q + + + D +
Sbjct: 372 FNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDEL 430
>Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24897577-24898734 | 20130731
Length = 202
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
+I G C + ++EA L E++ +VAY++++D +C+ + D + ++
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVW-------DLI 53
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
+M RG ++ + L+ L K + + A+ L ++ + G P+ T+ +L+ L +
Sbjct: 54 DDMHDRGQQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKN 113
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
RL++ E+ + G+ + + + LC + AL V + M+ +GC P +
Sbjct: 114 GRLKDAQEVYRDLMVKGY--HFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVV 171
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY L+ L ++ DKA L E SRGL
Sbjct: 172 TYKTLIRALFKNDMNDKAVKLLREMLSRGL 201
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ LC A + K+L + + PD LI G C GK+ + L +M+ G
Sbjct: 1 MINGLCKNKMVDEAVNLFKELHLKNMAPDIVAYSSLIDGLCKSGKISDVWDLIDDMHDRG 60
Query: 76 FELGVVAYNAMLDC----------VCELCRQKD----PFLLH--------------SEAE 107
+ ++ Y ++LD + L + KD P + +A+
Sbjct: 61 QQADIIIYTSLLDALFKNHQVDKAIALLKKIKDRGIEPDMFTYTMLVDGLCKNGRLKDAQ 120
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
+V ++ +G N NV+I LCK ++AL + M + GC P+ T+ LIR+L
Sbjct: 121 EVYRDLMVKGYHFNACMHNVMINGLCKEGLFDEALFVLSEMEDNGCTPDVVTYKTLIRAL 180
Query: 168 YQAARLEEGDEMIDRMKSAGF 188
++ ++ +++ M S G
Sbjct: 181 FKNDMNDKAVKLLREMLSRGL 201
>Medtr7g017530.1 | PPR containing plant protein | HC |
chr7:5596340-5592826 | 20130731
Length = 849
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 101/232 (43%), Gaps = 10/232 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLA-RVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ RD + ++ LC G A R++++++ R ++P +I G LE+A
Sbjct: 314 GIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDA 373
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
L EM + V+YN M+ +L R EA EM+ G+ R+V T
Sbjct: 374 LNLYEEMKLRSISVDRVSYNTMVGIYAKLGR-------FDEAIGQCKEMESCGMKRDVVT 426
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N L++ + ++ +LF M W YPN T+ +I + +E ++ K
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFK 486
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
A +D Y + LC VE ++ + M G +P + T++ ++
Sbjct: 487 KAQL--EVDVVFYTSIIDSLCKNGLVESSIMLLIAMIEKGIKPNVVTFNSII 536
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 9/200 (4%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
EM G + YN++L +C K + A+K+L EMD +G+ R+ T+N +
Sbjct: 274 EMLAEGIVPDRLTYNSLL----SVCASKG---MWETAQKLLSEMDQKGIVRDAFTYNTYL 326
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
LCK + + A ++ M +P T+ +I +A LE+ + + MK
Sbjct: 327 DTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSI- 385
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
S+D+ +Y + I + R + A+ M++ G + + TY+ L+S G + D+
Sbjct: 386 -SVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVR 444
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
LF E ++ + Y+
Sbjct: 445 RLFEEMKAWNIYPNTLTYST 464
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 15/203 (7%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
LA I PD + L+ G E A++L EM + G YN LD +C+ Q
Sbjct: 276 LAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCK-GGQ 334
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
D A +VL EM R V V T++ +I K EDAL L+ M +
Sbjct: 335 IDL------ARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVD 388
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER---VEHA 213
++ ++ + R +E M+S G K+ + +L G R +
Sbjct: 389 RVSYNTMVGIYAKLGRFDEAIGQCKEMESCGM-----KRDVVTYNALLSGYGRYGMYDEV 443
Query: 214 LKVFAMMKADGCEPGIKTYDLLM 236
++F MKA P TY ++
Sbjct: 444 RRLFEEMKAWNIYPNTLTYSTMI 466
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIF--PDEAMCDMLIKGWCVDGKLEEARRLAGEMYR 73
VV ++ +G + R+ K + R I+ P+E + ++I +G L++ R + EM
Sbjct: 107 VVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIITLLGREGLLDKCREVFDEMPS 166
Query: 74 GGFELGVVAYNAMLDC------------VCELCRQK--DPFLLHSEAE------------ 107
G V AY A+++ + E +Q+ P +L
Sbjct: 167 QGVARSVFAYTAVINAYGRNGQFQTSVELLESMKQERVSPSILTYNTVINACARGGLDWE 226
Query: 108 ---KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+ EM + G+ +V T+N L++ ++A +F M E G P+ T+ L+
Sbjct: 227 GLLGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLV 286
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+ + +LE+ E++ M+S G+ D +Y L + ++ ++ VF M+ G
Sbjct: 287 HTFGKLNKLEKVSELLREMESG--GSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAG 344
Query: 225 CEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
C P TY +L++ G H R D LF E
Sbjct: 345 CVPNSATYSILLNLYGKHGRYDDVRDLFLE 374
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 103/256 (40%), Gaps = 45/256 (17%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P +I+ + EEA M G V YN++ VC R
Sbjct: 450 IVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNSL---VCSFSRGG--- 503
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L+ E E +L M G+PR+V +FN +I L + + E+A+K M + C PNE+TF
Sbjct: 504 -LYKEVEAILFRMSESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANCDPNESTF 562
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALK----- 215
++ A ++E +E +K++G S+ Y LT+ +R A K
Sbjct: 563 EAVLSIYCSAGLVDESEEQFQEIKASGILPSV--MCYCMMLTLYTKNDRSNDAYKLIDEM 620
Query: 216 -------------------------------VFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
+F + ++GC G+K Y+ L+ L +
Sbjct: 621 ITTRVSDVHQVIGQMIKGDFDDEFNWQIVEYIFDKLNSEGCGFGMKFYNALLETLWWMCQ 680
Query: 245 VDKANALFHEAQSRGL 260
++A + +EA RGL
Sbjct: 681 RERAARVLNEASKRGL 696
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD ++LI+ + G +E L +M E + Y ++ C + F
Sbjct: 382 PDAGTYNILIQVFGEGGYFKEVVTLFHDMVDENIEPNMETYEGLIFA----CGKGGLF-- 435
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
+A+K+L+ M+ +G+ + + + +I + E+AL F+ M E G P T+
Sbjct: 436 -EDAKKILLHMNEKGIVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSTPTVETYNS 494
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ S + +E + ++ RM +G D ++ + L + E A+K M+
Sbjct: 495 LVCSFSRGGLYKEVEAILFRMSESGL--PRDVHSFNGVIEALRQAGQYEEAVKAHVEMEK 552
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
C+P T++ ++S + VD++ F E ++ G+
Sbjct: 553 ANCDPNESTFEAVLSIYCSAGLVDESEEQFQEIKASGI 590
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/228 (20%), Positives = 96/228 (42%), Gaps = 9/228 (3%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + L+ G +EA + M GG + Y+ ++ +L + +
Sbjct: 240 IQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSYLVHTFGKLNKLE--- 296
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
+ ++L EM+ G +V ++NVL+ + ++++ +F +M E GC PN T+
Sbjct: 297 ----KVSELLREMESGGSLPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPNSATY 352
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
+L+ + R ++ ++ MK + D Y + + + + +F M
Sbjct: 353 SILLNLYGKHGRYDDVRDLFLEMKVS--NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDM 410
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ EP ++TY+ L+ G + A + +G+ + K Y
Sbjct: 411 VDENIEPNMETYEGLIFACGKGGLFEDAKKILLHMNEKGIVPSSKAYT 458
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 10/215 (4%)
Query: 5 YGLKRDRGSLKVVVEKLCSKGFASYAERMV-KDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
+G+ D S +++ C G S A + K R + PD +L++ C ++
Sbjct: 176 HGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNG 235
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
A L +M GF Y +L+ LCR+K EA K+L M +G ++
Sbjct: 236 AVDLFEDMLNKGFVPDSFTYTTLLN---SLCRKKKL----REAYKLLCRMKVKGCNPDIV 288
Query: 124 TFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+N +I C+ + DA K+ M GC PN ++ L+ L L+E + ++ M
Sbjct: 289 HYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEM 348
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
S GF + + C + R+E A V
Sbjct: 349 LSKGFSPHF--AVIHALVKGFCNVGRIEEACGVLT 381
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 44/221 (19%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+FPD ++L++ +C++G + A L +M++
Sbjct: 178 VFPDTKSYNILMRAFCLNGDISIAYTLFNKMFK--------------------------- 210
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
R V +++++ +L+ LC+ + A+ LF M G P+ T+
Sbjct: 211 ---------------RDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTY 255
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMM 220
L+ SL + +L E +++ RMK G + D Y + C R A KV M
Sbjct: 256 TTLLNSLCRKKKLREAYKLLCRMKVKG--CNPDIVHYNTVILGFCREGRAHDACKVIDDM 313
Query: 221 KADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+A+GC P + +Y L++ L +D+A E S+G +
Sbjct: 314 QANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFS 354
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
Query: 116 RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
GV + +++N+L+ C A LF++M + P+ ++ +L+++L + +++
Sbjct: 176 HGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNG 235
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++ + M + GF D Y L LC +++ A K+ MK GC P I Y+ +
Sbjct: 236 AVDLFEDMLNKGFVP--DSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTV 293
Query: 236 MSKLGAHNRVDKANALFHEAQSRG 259
+ R A + + Q+ G
Sbjct: 294 ILGFCREGRAHDACKVIDDMQANG 317
>Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24888340-24886119 | 20130731
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 114/293 (38%), Gaps = 65/293 (22%)
Query: 20 KLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
KL + F Y+E +A+ I PD LI G+C+ GKL + L +M
Sbjct: 64 KLVNDAFDLYSEM----VAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPD 119
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTE 139
V +N +D C+ R K EA+ VL M G+ +V T+N L+ C +++
Sbjct: 120 VYTFNISVDAFCKEGRVK-------EAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMN 172
Query: 140 DALKLFHRMGEWGCY--------------------------------------------- 154
A +F+ M + G
Sbjct: 173 MAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYN 232
Query: 155 -------PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
P+ T+ + I+ L Q+ +L++ ++ + + G+ +LD Y + C
Sbjct: 233 SILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGY--NLDVYTYTVMIQGFCDK 290
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ AL + + M+ +GC P K Y++++ L + D A L E +RGL
Sbjct: 291 GLFKEALALLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIARGL 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 61 LEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPR 120
L+ RR+ G++ + V+ Y+ ++D +C+ D F L+S EM + +
Sbjct: 35 LQLLRRVDGKL----VQPNVIMYSTIIDGMCKGKLVNDAFDLYS-------EMVAKRISP 83
Query: 121 NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
+V T++ LI+ C + K D + LF++M P+ TF + + + + R++E ++
Sbjct: 84 DVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVL 143
Query: 181 DRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
M G S+ Y + C ++ + A +F M G
Sbjct: 144 SMMMKHGIKPSV--VTYNTLMNGYCLVKEMNMAKDIFNTMNQSG 185
>Medtr7g070420.1 | PPR containing plant-like protein | HC |
chr7:25994193-25997035 | 20130731
Length = 737
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 48/305 (15%)
Query: 6 GLKRDRGSLKVVVEKLC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEA 64
+ + ++ ++ LC S F +R L+ PD C++L+ +
Sbjct: 33 SFQPSQHTISTILHTLCNSNRFEEAHQRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPFQT 92
Query: 65 RRLAGEMY--RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
L + + GF +V YN ++D C + R PF +A ++ +M RG NV
Sbjct: 93 WSLVKSLIQIKAGFVPSLVNYNRLMDHFCFIHR---PF----DAHRLFFDMKNRGHCPNV 145
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE---- 178
++ LI C + DA+K+F M E G PN T+ VLIR + E G E
Sbjct: 146 VSYTTLINGYCSVGGIRDAMKVFDEMLESGLEPNSMTYSVLIRGFLRGRDFESGRELMCK 205
Query: 179 --------------------MIDRMKSAGF-------------GASLDKKAYY-QFLTIL 204
+ID + GF G+SL ++ Y Q +
Sbjct: 206 LWERMKMEDELSVNVAAFANLIDSLCKEGFFNEVFEIAELMPCGSSLPEQVVYGQMIDSF 265
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
C + R A ++ +M+ P +Y+ ++ L + L E G ++
Sbjct: 266 CKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCE 325
Query: 265 KEYAV 269
Y V
Sbjct: 326 HTYKV 330
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 10/255 (3%)
Query: 17 VVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ C G A R+V + R P + + +I G DG +L E G
Sbjct: 261 MIDSFCKVGRYHGAARIVYLMRKRRFVPSDVSYNHIIHGLSKDGDCMRGYQLLEEGAEFG 320
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
F L Y +++ LCR D +A +VL M Y+ +N+ + LC +
Sbjct: 321 FSLCEHTYKVLVE---ALCRVLDV----DKAREVLKLMLYKEGVDKTRIYNIYLRALCHV 373
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ L + M E C + T +I + R +E ++++ M F A D
Sbjct: 374 NNPTELLNVLVFMLESHCQTDVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAP-DVV 432
Query: 196 AYYQFLTILCGIERVEHALKVFA-MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ ++ L E+V+ AL +F +M +G +PG+ TY++L+ L R + A +F+
Sbjct: 433 TFTTLISGLLDAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNN 492
Query: 255 AQSRGLAVTPKEYAV 269
G+ Y V
Sbjct: 493 MAGDGITPDSTTYTV 507
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF-ELGVVAYNAMLDCVCELCRQKDPFLL 102
D + +I G+C G+ +EA ++ +M G F VV + ++ LL
Sbjct: 394 DVITLNTVINGFCKMGRFDEALKVLNDMLLGKFCAPDVVTFTTLISG-----------LL 442
Query: 103 HSEAEKVLVEMDYRGVPRN-----VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNE 157
+E +++ R +P N V T+NVLI L K+++ DA ++F+ M G P+
Sbjct: 443 DAEKVDEALDLFNRVMPENGLKPGVVTYNVLIRCLYKLKRPNDAFEVFNNMAGDGITPDS 502
Query: 158 TTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL-DKKAYYQFLTILCGIERVEHALKV 216
TT+ V++ L + ++EE +S + + + D Y L LC + A
Sbjct: 503 TTYTVIVEGLCECDQIEEAKSF---WQSVIWPSGIHDNFVYAAILKGLCSSGKFNEACHF 559
Query: 217 FAMMKADGCEPGIKTYDLLMS 237
+ G P I +Y++L++
Sbjct: 560 LYELVDSGISPNIYSYNILIN 580
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 17/250 (6%)
Query: 6 GLKRDRGSLKVVVEK-LCSKGFASYAERMVKDLARVIFPDEAMCDM-----LIKGWCVDG 59
GL+ + + V++ L + F S E M K R+ DE ++ LI C +G
Sbjct: 175 GLEPNSMTYSVLIRGFLRGRDFESGRELMCKLWERMKMEDELSVNVAAFANLIDSLCKEG 234
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
E +A M G V Y M+D C++ R H A V + R VP
Sbjct: 235 FFNEVFEIAELMPCGSSLPEQVVYGQMIDSFCKVGR------YHGAARIVYLMRKRRFVP 288
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V ++N +I L K +L E+G E T+ VL+ +L + +++ E+
Sbjct: 289 SDV-SYNHIIHGLSKDGDCMRGYQLLEEGAEFGFSLCEHTYKVLVEALCRVLDVDKAREV 347
Query: 180 IDRMKSAGFGASLDKKAYYQ-FLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ M + +DK Y +L LC + L V M C+ + T + +++
Sbjct: 348 LKLML---YKEGVDKTRIYNIYLRALCHVNNPTELLNVLVFMLESHCQTDVITLNTVING 404
Query: 239 LGAHNRVDKA 248
R D+A
Sbjct: 405 FCKMGRFDEA 414
>Medtr8g463610.1 | PPR containing plant-like protein | HC |
chr8:22423507-22425972 | 20130731
Length = 360
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + ++I+G + ++ EA ++ EM + G YNA++ +C++
Sbjct: 6 IVPDVVLYAIMIRGLSKECRVGEAAKMLDEMTQIGLTPDAYCYNAVIQGLCDVG------ 59
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L + A +L+E+ NV T +LI +CK +A +LF++M + GC P+ TF
Sbjct: 60 -LLNRAHSLLLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTF 114
Query: 161 VVLIRSLYQAARLEEGDEMIDRMK-----------SAGFGASLDKKAYYQFLTILCGIER 209
LI L +A LE+ + +++ S G G D + +C +
Sbjct: 115 NTLINGLCKANNLEKAKILFCKLEVGRRLSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQ 174
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ A K+ A + + +P I TY++L++ L V+ A F Q +G
Sbjct: 175 ILRAYKLIANLAGE-VKPDIITYNILLNALCMDREVNAAYNFFEFLQKKG 223
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 60/273 (21%)
Query: 30 AERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
A +M+ ++ ++ +A C + +I+G C G L A L E+ E V + +
Sbjct: 29 AAKMLDEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAHSLLLEIS----EHNVCTHTIL-- 82
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHR- 147
+CE+C++ + +EA+++ +M+ G +V TFN LI LCK E A LF +
Sbjct: 83 -ICEMCKRG----MVAEAQELFNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKILFCKL 137
Query: 148 -------------------------------MGEWG---------------CYPNETTFV 161
M E G P+ T+
Sbjct: 138 EVGRRLSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLIANLAGEVKPDIITYN 197
Query: 162 VLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
+L+ +L + + ++ G+ S + Y + L ++R + A KVF M+
Sbjct: 198 ILLNALCMDREVNAAYNFFEFLQKKGY-PSPNNVTYGTIIKGLFMVDREDEAFKVFQRMQ 256
Query: 222 ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
EP + Y LM+ L ++V A L+ E
Sbjct: 257 KTSSEPTLSVYRTLMTCLCRKSKVSCAFTLYLE 289
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 10/253 (3%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++ LC AE + K++ + P ++ +LI +C G L+ A G M G
Sbjct: 364 LINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDG 423
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ YN++++ C+ F S AE + +M G+ TF LI+ CK
Sbjct: 424 IRETIYPYNSLINGHCK-------FGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKD 476
Query: 136 RKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKK 195
+ E A KL+ M E P+ TF LI L + E ++ D M + +
Sbjct: 477 LQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPT--EV 534
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEA 255
Y + C ++ A ++ M +G P TY L+S L + RV A +
Sbjct: 535 TYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDL 594
Query: 256 QSRGLAVTPKEYA 268
+ L + Y+
Sbjct: 595 HKKNLKLNEMCYS 607
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 101/260 (38%), Gaps = 32/260 (12%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
GL D + + ++ LCS G S A+ + DL + MC L+ G+C G+L EA
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL---------------------- 102
+ EM + G + +V + ++D + K F L
Sbjct: 623 LSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDA 682
Query: 103 ------HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
++ + L M NV T+ + LCK+ + + A LF +M PN
Sbjct: 683 YSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPN 742
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ + SL + ++E ++ M G + Y + C + R+ A KV
Sbjct: 743 SVTYGCFLDSLTKEGNMKEATDLHHEMLK---GLLANTATYNILIRGFCKLGRLIEATKV 799
Query: 217 FAMMKADGCEPGIKTYDLLM 236
+ M +G P TY ++
Sbjct: 800 LSEMTENGIFPDCITYSTII 819
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 11/264 (4%)
Query: 7 LKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
+K + V++E C A +++D L + PD LI G C G++ A+
Sbjct: 529 IKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
++++ +L + Y+A+L C R +EA EM RG+ ++
Sbjct: 589 DFIDDLHKKNLKLNEMCYSALLHGYCGQGRL-------TEALSASCEMIQRGINMDLVCH 641
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
VLI K + + L +M + G P+ + +I + + ++ E +D M +
Sbjct: 642 AVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVT 701
Query: 186 AGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRV 245
++ Y F+ LC + ++ A +F M P TY + L +
Sbjct: 702 EKCFPNV--VTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM 759
Query: 246 DKANALFHEAQSRGLAVTPKEYAV 269
+A L HE +GL Y +
Sbjct: 760 KEATDLHHEML-KGLLANTATYNI 782
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 9/225 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD C +I+ C A+ M F+L +V YN ++ +C K +L
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLC-----KGGGVL 270
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA +V + +G+ +V T+ L+ C++++ +D + L + M E G P E
Sbjct: 271 --EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSG 328
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + ++ +++ ++ GF +L Y + LC E ++ A ++ M +
Sbjct: 329 LVDGLRKKGNIDSAYDLVVKLGRFGFLPNL--FVYNALINALCKGEDLDKAELLYKNMHS 386
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
TY +L+ +D A + F G+ T Y
Sbjct: 387 MNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPY 431
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 99/258 (38%), Gaps = 46/258 (17%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKG-FASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLE 62
D GL+ D +++ +G F E + + FP+ + G C G+++
Sbjct: 666 DQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEID 725
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
A L +M V Y LD + + K+ LH E K G+ N
Sbjct: 726 RAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK--------GLLANT 777
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N+LI CK+ + +A K+ M E G +P+ T+ +I Y+ R
Sbjct: 778 ATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII---YEHCR---------- 824
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
S GA A++++ M G EP ++LL+ +
Sbjct: 825 --SGDVGA----------------------AVELWDTMLRKGVEPDSVAFNLLIYGCCVN 860
Query: 243 NRVDKANALFHEAQSRGL 260
+DKA L ++ SRGL
Sbjct: 861 GALDKAFELRNDMLSRGL 878
>Medtr1g080120.2 | PPR containing plant-like protein | HC |
chr1:35583141-35579895 | 20130731
Length = 573
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 10/249 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
+G++ + + +++ L G++ + ++K + I P ++L+ C G L+
Sbjct: 313 SHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLD 372
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+ L +M +V YN +L+ +C K+ F+ E+ ++L + +
Sbjct: 373 RSISLYIKMVSENCSPDIVTYNTLLNALC-----KEGFI--DESIQLLHSLSGTNCSPGL 425
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N++I L ++R + A +++ M E G P+ T L+ L Q + EE E+
Sbjct: 426 VTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKV 485
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G + AY + LC ++++ A++ +M C+P K Y L+ +
Sbjct: 486 MHR--IGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLLKSVANE 543
Query: 243 NRVDKANAL 251
V++AN L
Sbjct: 544 GMVNEANDL 552
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 19/269 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G D + ++ + KG + A KD R FP + +L++ C A
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M R G + YN++++ + KD L V+ + G+ NV T
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTAL-------VISNLLSHGMQPNVVT 322
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI +L ++ + M E P T+ +L+ SL ++ L+ + +M
Sbjct: 323 YNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMV 382
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S S D Y L LC ++ ++++ + C PG+ TY+++++ L
Sbjct: 383 SEN--CSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRS 440
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A ++ E +G +DP Y
Sbjct: 441 IKSAKEMYGEMVEKG---------IDPDY 460
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 114/302 (37%), Gaps = 66/302 (21%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVI-FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LCS+G + A R+V+ +AR+ P C LI+G G++++ ++ M G
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 76 FELGVVAYNAMLDCVCELCRQKDPF-----------LLHSEAEKVLVEMDY--------- 115
+ +NA++ +C+ K L ++ ++ +
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 116 --------RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC-------------- 153
+G P + T+ +L+ +CK AL++ M GC
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFS 295
Query: 154 ---------------------YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
PN T+ +LI SL + D+++ M +L
Sbjct: 296 SKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTL 355
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y L LC ++ ++ ++ M ++ C P I TY+ L++ L +D++ L
Sbjct: 356 --VTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLL 413
Query: 253 HE 254
H
Sbjct: 414 HS 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++VE +C AS A +++D+AR PD M + L+ G ++ + +
Sbjct: 255 LLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSH 314
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE---KVLVEMDYRGVPRNVETFNVLITN 131
G + VV YN ++ LH ++ +L M+ + + T+N+L+ +
Sbjct: 315 GMQPNVVTYNILIH----------SLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNS 364
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK + ++ L+ +M C P+ T+ L+ +L + ++E +++ + +G S
Sbjct: 365 LCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSL--SGTNCS 422
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
Y + L + ++ A +++ M G +P T+ L+ L + ++A +
Sbjct: 423 PGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEI 482
Query: 252 F 252
F
Sbjct: 483 F 483
>Medtr1g080120.1 | PPR containing plant-like protein | HC |
chr1:35583728-35579895 | 20130731
Length = 573
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 10/249 (4%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLE 62
+G++ + + +++ L G++ + ++K + I P ++L+ C G L+
Sbjct: 313 SHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLD 372
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+ L +M +V YN +L+ +C K+ F+ E+ ++L + +
Sbjct: 373 RSISLYIKMVSENCSPDIVTYNTLLNALC-----KEGFI--DESIQLLHSLSGTNCSPGL 425
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
T+N++I L ++R + A +++ M E G P+ T L+ L Q + EE E+
Sbjct: 426 VTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEIFKV 485
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAH 242
M G + AY + LC ++++ A++ +M C+P K Y L+ +
Sbjct: 486 MHR--IGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYTLLKSVANE 543
Query: 243 NRVDKANAL 251
V++AN L
Sbjct: 544 GMVNEANDL 552
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 110/269 (40%), Gaps = 19/269 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEA 64
G D + ++ + KG + A KD R FP + +L++ C A
Sbjct: 210 GCLPDAKTYNTIIRCIFDKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRA 269
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ +M R G + YN++++ + KD L V+ + G+ NV T
Sbjct: 270 LEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTAL-------VISNLLSHGMQPNVVT 322
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N+LI +L ++ + M E P T+ +L+ SL ++ L+ + +M
Sbjct: 323 YNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMV 382
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
S S D Y L LC ++ ++++ + C PG+ TY+++++ L
Sbjct: 383 SEN--CSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPGLVTYNIVINGLARMRS 440
Query: 245 VDKANALFHEAQSRGLAVTPKEYAVDPRY 273
+ A ++ E +G +DP Y
Sbjct: 441 IKSAKEMYGEMVEKG---------IDPDY 460
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 114/302 (37%), Gaps = 66/302 (21%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVI-FPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+++ LCS+G + A R+V+ +AR+ P C LI+G G++++ ++ M G
Sbjct: 116 ILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCKIMNMMVMSG 175
Query: 76 FELGVVAYNAMLDCVCELCRQKDPF-----------LLHSEAEKVLVEMDY--------- 115
+ +NA++ +C+ K L ++ ++ +
Sbjct: 176 GVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAV 235
Query: 116 --------RGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGC-------------- 153
+G P + T+ +L+ +CK AL++ M GC
Sbjct: 236 SFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFS 295
Query: 154 ---------------------YPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASL 192
PN T+ +LI SL + D+++ M +L
Sbjct: 296 SKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTL 355
Query: 193 DKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
Y L LC ++ ++ ++ M ++ C P I TY+ L++ L +D++ L
Sbjct: 356 --VTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLL 413
Query: 253 HE 254
H
Sbjct: 414 HS 415
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 107/241 (44%), Gaps = 16/241 (6%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
++VE +C AS A +++D+AR PD M + L+ G ++ + +
Sbjct: 255 LLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLLSH 314
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE---KVLVEMDYRGVPRNVETFNVLITN 131
G + VV YN ++ LH ++ +L M+ + + T+N+L+ +
Sbjct: 315 GMQPNVVTYNILIH----------SLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNS 364
Query: 132 LCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGAS 191
LCK + ++ L+ +M C P+ T+ L+ +L + ++E +++ + +G S
Sbjct: 365 LCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSL--SGTNCS 422
Query: 192 LDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
Y + L + ++ A +++ M G +P T+ L+ L + ++A +
Sbjct: 423 PGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQFEEAVEI 482
Query: 252 F 252
F
Sbjct: 483 F 483
>Medtr6g079300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29904711-29905680 | 20130731
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 109/256 (42%), Gaps = 26/256 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K D + ++ C G ++ ++ + ++ + PD + LIKG C+ G + +A
Sbjct: 5 GIKPDLVNCNILTNCFCQLGLIPFSFSVLAKILKMGYEPDTITLNTLIKGLCLKGDIHQA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
++ GF L +Y +++ +C+ K A ++L +D + V +V
Sbjct: 65 LHFHDKLVAIGFMLDQFSYGTLINDLCKAGETK-------AALELLRRVDGKLVQPDVVK 117
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+ +I ++CK + A L+ +M P+ T+ + +I
Sbjct: 118 YIAIIDSMCKDKHVNHAFDLYSKMVSKRISPDILTY----------------NALISDFC 161
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
GF + Y + C ++ V A +F M +G P I++Y++L++ +
Sbjct: 162 IVGFKPNF--VTYNSLMDGYCLLKEVNKAKSIFNTMAQEGVNPAIQSYNILINGFCKIKK 219
Query: 245 VDKANALFHEAQSRGL 260
VD+A LF E R L
Sbjct: 220 VDEAINLFEEMHCRKL 235
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G D+ S ++ LC G A +++ + +++ PD +I C D + A
Sbjct: 75 GFMLDQFSYGTLINDLCKAGETKAALELLRRVDGKLVQPDVVKYIAIIDSMCKDKHVNHA 134
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHS------------EAEKVLVE 112
L +M ++ YNA++ C + + + +S +A+ +
Sbjct: 135 FDLYSKMVSKRISPDILTYNALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNT 194
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M GV ++++N+LI CKI+K ++A+ LF M P+ T+ LI L ++ +
Sbjct: 195 MAQEGVNPAIQSYNILINGFCKIKKVDEAINLFEEMHCRKLIPDVVTYNSLIDGLCKSGK 254
Query: 173 LEEGDEMIDRMKSAG 187
+ +++D M G
Sbjct: 255 ISYALKLVDEMHDRG 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
+V K S +Y ++ D V F P+ + L+ G+C+ ++ +A+ + M + G
Sbjct: 141 MVSKRISPDILTY-NALISDFCIVGFKPNFVTYNSLMDGYCLLKEVNKAKSIFNTMAQEG 199
Query: 76 FELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKI 135
+ +YN +++ C++ ++ D EA + EM R + +V T+N LI LCK
Sbjct: 200 VNPAIQSYNILINGFCKI-KKVD------EAINLFEEMHCRKLIPDVVTYNSLIDGLCKS 252
Query: 136 RKTEDALKLFHRMGEWGCYPNETT 159
K ALKL M + G P+ T
Sbjct: 253 GKISYALKLVDEMHDRGQPPDIIT 276
>Medtr5g039700.1 | PPR containing plant-like protein | HC |
chr5:17489163-17486554 | 20130731
Length = 749
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + ++I+G +G++ EA ++ EM + G YNA++ +C++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVG------ 343
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L + A+ + +E+ NV T +LI +CK +A +LF++M + GC P+ TF
Sbjct: 344 -LLNRAQSLRLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTF 398
Query: 161 VVLIRSLYQAARLEEGDEMIDRMK-----------SAGFGASLDKKAYYQFLTILCGIER 209
LI L +A LE+ + +++ S G G D + +C +
Sbjct: 399 NTLINGLCKANNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQ 458
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ A K+ + A +P I TY++L++ L V+ A F Q +G
Sbjct: 459 ILRAYKLITDL-AGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKG 507
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 60/287 (20%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKLEEARRLAGEMYRG 74
+++ L +G A +M++++ ++ +A C + +I+G C G L A+ L E+
Sbjct: 299 IMIRGLSKEGRVGEAAKMLEEMTQIGLTPDAYCYNAVIQGLCDVGLLNRAQSLRLEIS-- 356
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
E V + + +CE+C++ + +EA+++ +M+ G +V TFN LI LCK
Sbjct: 357 --EHNVCTHTIL---ICEMCKRG----MVAEAQELFNQMEKLGCEPSVVTFNTLINGLCK 407
Query: 135 IRKTEDALKLFHR--------------------------------MGEWG---------- 152
E A LF + M E G
Sbjct: 408 ANNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLIT 467
Query: 153 -----CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
P+ T+ +L+ +L + + ++ G+ S D Y + L +
Sbjct: 468 DLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY-PSPDNVTYGTIIKGLFMV 526
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+R + A KVF M+ G EP + Y LM+ L ++V +A L+ E
Sbjct: 527 DREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYFE 573
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 108/276 (39%), Gaps = 75/276 (27%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +MLI G+C G+++ A+ + EM R G V++ ++L C+
Sbjct: 152 PNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNV------ 205
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL------------------ 144
EA K+ +M P ++ + NV++ CK+ + E+AL
Sbjct: 206 -DEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYSS 264
Query: 145 -----------------FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ +M + G P+ + ++IR L + R+ E +M++ M G
Sbjct: 265 LINAFFKARRYREAHAWYTKMFKQGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 188 FGASLDKKAYYQFLTILCGI-----------ERVEH--------------------ALKV 216
+ D Y + LC + E EH A ++
Sbjct: 325 L--TPDAYCYNAVIQGLCDVGLLNRAQSLRLEISEHNVCTHTILICEMCKRGMVAEAQEL 382
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
F M+ GCEP + T++ L++ L N ++KA LF
Sbjct: 383 FNQMEKLGCEPSVVTFNTLINGLCKANNLEKAKNLF 418
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D S +++ C A + +++ + I PD + LI G C GK+ A
Sbjct: 5 GVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGKISYA 64
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+L EM G ++ YN++L+ +C+ Q D +A +L ++ +G+ N+ T
Sbjct: 65 LKLVDEMNDRGQLPDIITYNSILNALCK-NHQVD------KAIALLTKLKDQGIRPNIYT 117
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+LI + AL L +M + CYPN T+ ++IRSL+ ++ + + + +
Sbjct: 118 HTILI---------DGALALLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKAERLCEMIP 168
Query: 185 SAGFGASLDKKAYYQ 199
++D + Y
Sbjct: 169 IPSTTVNIDLDSLYD 183
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M RGV +V ++N++I CKI+K ++A+ LF M P+ T+ LI + ++ +
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIPDVVTYNSLIDGICKSGK 60
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
+ +++D M G D Y L LC +V+ A+ + +K G P I T+
Sbjct: 61 ISYALKLVDEMNDR--GQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIYTH 118
Query: 233 DLLM 236
+L+
Sbjct: 119 TILI 122
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M G V +YN M++ C++ + EA + EM + + +V T+N LI
Sbjct: 1 MASRGVTHDVSSYNIMINGFCKIKKV-------DEAMNLFEEMHCKNIIPDVVTYNSLID 53
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+CK K ALKL M + G P+ T+ ++ +L + ++++ ++ ++K G
Sbjct: 54 GICKSGKISYALKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRP 113
Query: 191 SLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANA 250
++ Y TIL ++ AL + + MK + C P TY +++ L N DKA
Sbjct: 114 NI----YTH--TIL-----IDGALALLSKMKDNNCYPNAVTYRIIIRSLFDKNDNDKAER 162
Query: 251 L 251
L
Sbjct: 163 L 163
>Medtr5g077270.1 | pentatricopeptide (PPR) repeat protein, putative
| LC | chr5:32993125-32987939 | 20130731
Length = 872
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 39 RVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKD 98
R I PD C+ ++ +C + EA L+ E G L +YN ++ +LCR+
Sbjct: 562 RGIRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEFIN---KLCRESF 618
Query: 99 PFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNET 158
P +A ++L M R V V ++ LI+ K ++ A+KLF RM + G N
Sbjct: 619 P----EKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNSKKAVKLFTRMTKVGITFNIK 674
Query: 159 TFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFA 218
T LI + ++++ ++ + M+ G D+ Y + C + A +F
Sbjct: 675 THTALIDLCIRNCKIDKACDLFEDMEKRGVHP--DQITYNTLIAAFCNTGEMIIAKTLFD 732
Query: 219 MMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVT 263
M +GC P + TY ++ + D+A+ + E + L T
Sbjct: 733 RMLQEGCSPNVVTYSCFINAYWKLDMRDQAHKWYDEMRFSLLVAT 777
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKL 61
RD+G+ + S + KLC + F A +++ L R + P LI +
Sbjct: 595 RDHGVSLNPYSYNEFINKLCRESFPEKALQLLPVMLKRNVLPGVVNYSTLISCFAKQTNS 654
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
++A +L M + G + + A++D C+ +A + +M+ RGV +
Sbjct: 655 KKAVKLFTRMTKVGITFNIKTHTALIDLCIRNCKI-------DKACDLFEDMEKRGVHPD 707
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
T+N LI C + A LF RM + GC PN T+ I + ++ ++ + D
Sbjct: 708 QITYNTLIAAFCNTGEMIIAKTLFDRMLQEGCSPNVVTYSCFINAYWKLDMRDQAHKWYD 767
Query: 182 RMKSAGFGASLD 193
M+ + A+++
Sbjct: 768 EMRFSLLVATIN 779
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D+ + + L+ G+C +G + A +L EM F Y + + +L RQ
Sbjct: 497 DQTIYETLVDGFCREGDMVSAGKLLEEMGSNNFAPSAFCYCSQIKGFYKL-RQ------F 549
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ A KV M RG+ + N +++ C+ R+ +AL L + G N ++
Sbjct: 550 ANALKVYSIMQKRGIRPDTIACNHILSIYCRKREFNEALALSEEFRDHGVSLNPYSYNEF 609
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I L + + E+ +++ M + Y ++ + A+K+F M
Sbjct: 610 INKLCRESFPEKALQLLPVMLKRNVLPGVVN--YSTLISCFAKQTNSKKAVKLFTRMTKV 667
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
G IKT+ L+ + ++DKA LF + + RG+
Sbjct: 668 GITFNIKTHTALIDLCIRNCKIDKACDLFEDMEKRGV 704
>Medtr5g018230.2 | PPR containing plant-like protein | HC |
chr5:6777791-6781281 | 20130731
Length = 749
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + ++I+G +G++ EA ++ EM + G YNA++ +C++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDV------- 342
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L + A+ + +E+ NV T +LI +CK +A +LF++M + GC P+ TF
Sbjct: 343 DLLNRAQSLSLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTF 398
Query: 161 VVLIRSLYQAARLEEGDEMIDRMK-----------SAGFGASLDKKAYYQFLTILCGIER 209
LI L +A LE+ + +++ S G G D + +C +
Sbjct: 399 NTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQ 458
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ A K+ + A +P I TY++L++ L V+ A F Q +G
Sbjct: 459 ILRAYKLITDL-AGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKG 507
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 60/287 (20%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++ L +G A +M++++ ++ + PD + +I+G C L A+ L+ E+
Sbjct: 299 IMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEIS-- 356
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
E V + + +CE+C++ + +EA+++ +M+ G +V TFN LI LCK
Sbjct: 357 --EHNVCTHTIL---ICEMCKRG----MVAEAQELFNQMEKLGCEPSVVTFNTLINGLCK 407
Query: 135 IRKTEDALKLFHR--------------------------------MGEWG---------- 152
+ E A LF + M E G
Sbjct: 408 AKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLIT 467
Query: 153 -----CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
P+ T+ +L+ +L + + ++ G+ S D Y + L +
Sbjct: 468 DLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY-PSPDNVTYGTIIKGLFMV 526
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+R + A KVF M+ G EP + Y LM+ L ++V +A L+ E
Sbjct: 527 DREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLE 573
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 106/276 (38%), Gaps = 75/276 (27%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +MLI G+C G+++ A+ + EM R G V++ ++L C+
Sbjct: 152 PNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNV------ 205
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL------------------ 144
EA K+ +M P ++ + NV++ CK+ + E+AL
Sbjct: 206 -DEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYAS 264
Query: 145 -----------------FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ +M + G P+ + ++IR L + R+ E +M++ M G
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 188 FGASLDKKAYYQFLTILC-----------GIERVEH--------------------ALKV 216
D Y + LC +E EH A ++
Sbjct: 325 LTP--DSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCKRGMVAEAQEL 382
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
F M+ GCEP + T++ L++ L ++KA LF
Sbjct: 383 FNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
>Medtr5g018230.1 | PPR containing plant-like protein | HC |
chr5:6777784-6780862 | 20130731
Length = 749
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 106/230 (46%), Gaps = 23/230 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I PD + ++I+G +G++ EA ++ EM + G YNA++ +C++
Sbjct: 290 IVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDV------- 342
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
L + A+ + +E+ NV T +LI +CK +A +LF++M + GC P+ TF
Sbjct: 343 DLLNRAQSLSLEIS----EHNVCTHTILICEMCKRGMVAEAQELFNQMEKLGCEPSVVTF 398
Query: 161 VVLIRSLYQAARLEEGDEMIDRMK-----------SAGFGASLDKKAYYQFLTILCGIER 209
LI L +A LE+ + +++ S G G D + +C +
Sbjct: 399 NTLINGLCKAKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQ 458
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ A K+ + A +P I TY++L++ L V+ A F Q +G
Sbjct: 459 ILRAYKLITDL-AGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKG 507
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 60/287 (20%)
Query: 16 VVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+++ L +G A +M++++ ++ + PD + +I+G C L A+ L+ E+
Sbjct: 299 IMIRGLSKEGRVGEAAKMLEEMTQIGLTPDSYCYNAVIQGLCDVDLLNRAQSLSLEIS-- 356
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
E V + + +CE+C++ + +EA+++ +M+ G +V TFN LI LCK
Sbjct: 357 --EHNVCTHTIL---ICEMCKRG----MVAEAQELFNQMEKLGCEPSVVTFNTLINGLCK 407
Query: 135 IRKTEDALKLFHR--------------------------------MGEWG---------- 152
+ E A LF + M E G
Sbjct: 408 AKNLEKAKNLFCKLEVGRRHSLHLSLSQGSGQVSDSARLLKKAKEMCEAGQILRAYKLIT 467
Query: 153 -----CYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
P+ T+ +L+ +L + + ++ G+ S D Y + L +
Sbjct: 468 DLAGEVKPDIITYNILLNALCMDREVNAAYNFFEFLQKKGY-PSPDNVTYGTIIKGLFMV 526
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+R + A KVF M+ G EP + Y LM+ L ++V +A L+ E
Sbjct: 527 DREDEAFKVFQRMQKTGSEPTLSVYRTLMTCLCRKSKVSRAFTLYLE 573
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 106/276 (38%), Gaps = 75/276 (27%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P+ +MLI G+C G+++ A+ + EM R G V++ ++L C+
Sbjct: 152 PNFYTYNMLIDGFCKRGEVKGAQEMLDEMKRVGIVPCVLSTTSILYGCCQANNV------ 205
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL------------------ 144
EA K+ +M P ++ + NV++ CK+ + E+AL
Sbjct: 206 -DEAHKLFNDMKETSYPPDMISCNVVLNGFCKMGRLEEALSFVWMIKNDGFSLNRNSYAS 264
Query: 145 -----------------FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+ +M + G P+ + ++IR L + R+ E +M++ M G
Sbjct: 265 LINAFFKARRYREAHACYTKMFKEGIVPDVVLYAIMIRGLSKEGRVGEAAKMLEEMTQIG 324
Query: 188 FGASLDKKAYYQFLTILC-----------GIERVEH--------------------ALKV 216
D Y + LC +E EH A ++
Sbjct: 325 LTP--DSYCYNAVIQGLCDVDLLNRAQSLSLEISEHNVCTHTILICEMCKRGMVAEAQEL 382
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
F M+ GCEP + T++ L++ L ++KA LF
Sbjct: 383 FNQMEKLGCEPSVVTFNTLINGLCKAKNLEKAKNLF 418
>Medtr2g100200.2 | PPR containing plant-like protein | HC |
chr2:43021668-43019551 | 20130731
Length = 527
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 15/254 (5%)
Query: 9 RDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRL 67
RD GS V+V+ L + F + +++ ++ I D M ++I + G + +A +L
Sbjct: 134 RDVGSYHVIVKALGRRKFFVFMMQVLDEMRLNGIKADLLMLSIVIDSFVNAGHVSKAIQL 193
Query: 68 AGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNV 127
G + G N +L C+C C H A + V NV+T+NV
Sbjct: 194 FGNLDDLGLCRDTEVLNVLLSCLCRRC--------HVGAAASVFNSMKGKVSFNVDTYNV 245
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
++ K+ + + K+ M G P+ T + L +A R++E E+ MK
Sbjct: 246 VVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEK- 304
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D Y + I + +K + M +D CEP I TY +++ +V
Sbjct: 305 -----DTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVAD 359
Query: 248 ANALFHEAQSRGLA 261
A +F E +G+
Sbjct: 360 ALLMFDEMLRQGVV 373
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
D GL RD L V++ LC + A + + + + ++++ GW G++ E
Sbjct: 199 DLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWSKLGRVNE 258
Query: 64 ARRLAGEMYRGGF--ELGVVAY-------NAMLDCVCEL---CRQKDPFLLHSEAEKVLV 111
++ EM GF + +A+ +D E+ ++KD + ++ +
Sbjct: 259 IEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEKDTAIYNAMIFNFIS 318
Query: 112 EMDYRGVPR------------NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
D+ G + N+ T++ +IT + RK DAL +F M G P T
Sbjct: 319 IGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEMLRQGVVPPTGT 378
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
I+ L M+ K+ + +AY L L + L V+
Sbjct: 379 ITSFIKQLCSYG--PPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKCGSLLSVWQE 436
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M+ G ++ Y+ ++S L +++ A + EA +G
Sbjct: 437 MQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGF 477
>Medtr2g100200.1 | PPR containing plant-like protein | HC |
chr2:43021639-43019553 | 20130731
Length = 527
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 15/254 (5%)
Query: 9 RDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRL 67
RD GS V+V+ L + F + +++ ++ I D M ++I + G + +A +L
Sbjct: 134 RDVGSYHVIVKALGRRKFFVFMMQVLDEMRLNGIKADLLMLSIVIDSFVNAGHVSKAIQL 193
Query: 68 AGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNV 127
G + G N +L C+C C H A + V NV+T+NV
Sbjct: 194 FGNLDDLGLCRDTEVLNVLLSCLCRRC--------HVGAAASVFNSMKGKVSFNVDTYNV 245
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
++ K+ + + K+ M G P+ T + L +A R++E E+ MK
Sbjct: 246 VVGGWSKLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEK- 304
Query: 188 FGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDK 247
D Y + I + +K + M +D CEP I TY +++ +V
Sbjct: 305 -----DTAIYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVAD 359
Query: 248 ANALFHEAQSRGLA 261
A +F E +G+
Sbjct: 360 ALLMFDEMLRQGVV 373
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 110/281 (39%), Gaps = 26/281 (9%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEE 63
D GL RD L V++ LC + A + + + + ++++ GW G++ E
Sbjct: 199 DLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWSKLGRVNE 258
Query: 64 ARRLAGEMYRGGF--ELGVVAY-------NAMLDCVCEL---CRQKDPFLLHSEAEKVLV 111
++ EM GF + +A+ +D E+ ++KD + ++ +
Sbjct: 259 IEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEKDTAIYNAMIFNFIS 318
Query: 112 EMDYRGVPR------------NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
D+ G + N+ T++ +IT + RK DAL +F M G P T
Sbjct: 319 IGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEMLRQGVVPPTGT 378
Query: 160 FVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAM 219
I+ L M+ K+ + +AY L L + L V+
Sbjct: 379 ITSFIKQLCSYG--PPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKCGSLLSVWQE 436
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
M+ G ++ Y+ ++S L +++ A + EA +G
Sbjct: 437 MQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGF 477
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 23 SKGFASYAE--RMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
SK FA+ + R+++ L ++PD C+ ++ +C +A L+ + G
Sbjct: 404 SKQFANALKEFRIMQKLG--MWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNP 461
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
+YN + +CR P +A ++L M R V +V ++ LI+ K +E
Sbjct: 462 YSYNEFIH---RICRGSVP----EKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEK 514
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A+ LF +M + G N T+ +LI +++ + MK + D+ AY
Sbjct: 515 AVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYP--DQIAYTSL 572
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+ C + A +F M +GC P + TY +++ N+ ++A+ L+ + + RG+
Sbjct: 573 VAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGV 632
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 5/222 (2%)
Query: 48 CDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAE 107
C+ L+K D +++ R L + + G + Y M++ CR + A
Sbjct: 145 CNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNF---FCRGVGCSVDIRRAS 201
Query: 108 KVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSL 167
++L ++ G NV T+ I LCK+ A +L + N F +I L
Sbjct: 202 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 261
Query: 168 YQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEP 227
Q L+E E+ MK++G D +Y + C RV+ A +VF M+ G P
Sbjct: 262 CQGGILDEASEVFKEMKNSGILP--DVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILP 319
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
I +Y +L+ RVDKA +F E ++ G+ Y++
Sbjct: 320 NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 361
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 110/290 (37%), Gaps = 41/290 (14%)
Query: 14 LKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMY 72
V+ LC G A + K++ I PD +LI G+C G++++A + EM
Sbjct: 254 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 313
Query: 73 RGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNL 132
G + +Y+ ++D C+ R +A +V EM G+ +V ++++LI
Sbjct: 314 NSGILPNIYSYSILIDGFCKEGRV-------DKALEVFEEMKNSGILPDVYSYSILIDGF 366
Query: 133 CKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF---- 188
C+ + A+K + M P+ + LI+ Y++ + + M+ G
Sbjct: 367 CRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDT 426
Query: 189 -----------------------------GASLDKKAYYQFLTILCGIERVEHALKVFAM 219
G + +Y +F+ +C E AL++ +
Sbjct: 427 IACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPV 486
Query: 220 MKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
M P + Y L+S +KA LF + G+ K Y +
Sbjct: 487 MLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTI 536
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 9/221 (4%)
Query: 47 MCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEA 106
M + +G + A + G++Y G VV Y + +C++ L A
Sbjct: 183 MMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVG-------LFGVA 235
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
+++ + + P N FN +I LC+ ++A ++F M G P+ ++ +LI
Sbjct: 236 WRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDG 295
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
+ R+++ E+ M+++G ++ +Y + C RV+ AL+VF MK G
Sbjct: 296 FCRKGRVDQASEVFKEMRNSGILPNI--YSYSILIDGFCKEGRVDKALEVFEEMKNSGIL 353
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
P + +Y +L+ +D A + E S + + Y
Sbjct: 354 PDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNY 394
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 10/226 (4%)
Query: 37 LARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQ 96
L R + PD LI + E+A L +M + G V Y +++ C+
Sbjct: 488 LKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKM 547
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
+ L + + R P + + L+ C + A LF M GC PN
Sbjct: 548 DVAYRLFKGMK------ESRVYPDQI-AYTSLVAGFCNTGEMTRARALFDEMSREGCSPN 600
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ I + + + ++ ++MK G D+ Y + C + A +
Sbjct: 601 VVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYP--DQILYTMLIAAFCNTGEMNRAEAL 658
Query: 217 FAMMKADG-CEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
F MK +G C P + Y L++ N+ D+A L+ E +++GL+
Sbjct: 659 FDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 704
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ C G A + K ++ I P+ + L+ +C +GK+EEA
Sbjct: 21 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 80
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + VVAY+++++ C + F +A+ + M R + +V +
Sbjct: 81 KNVLNTMMEKDLKSDVVAYSSLMN---GYCLVNEVF----KAQSIFKTMAERELSYDVRS 133
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I CK++ ++A+KLF M +P+ T+ LI L ++ RL E++D M
Sbjct: 134 YNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMD 193
Query: 185 SAGFGASLDKKAYYQFLTILC 205
G ++ Y + +LC
Sbjct: 194 DRGEPPNI--ITYCPIVDVLC 212
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 97 KDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
KD F+ ++A + EM G+ NV T+ LI C + K E+AL LF +M PN
Sbjct: 3 KDTFV--NDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPN 60
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
TF L+ + + ++EE +++ M + D AY + C + V A +
Sbjct: 61 VYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKS--DVVAYSSLMNGYCLVNEVFKAQSI 118
Query: 217 FAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
F M +++Y++++++ VD+A LF E
Sbjct: 119 FKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEE 156
>Medtr1840s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold1840:257-1262 | 20130731
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 10/265 (3%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K + SL +++ C G +A + + ++ + P+ L+KG+C++ K++EA
Sbjct: 75 GIKPNIVSLSILINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEA 134
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ GF V+Y +++ +C++ + A ++L +++ + V NV
Sbjct: 135 LHFHDHVLALGFHFNQVSYGTLINGLCKIGETR-------AALQMLRQIEGKLVRTNVVM 187
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
++ +I LCK + DA +L+ M P T LI + +E ++ M
Sbjct: 188 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 247
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
D + + LC +++ A A+M +G P + TY LM N
Sbjct: 248 LKNINP--DVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNE 305
Query: 245 VDKANALFHEAQSRGLAVTPKEYAV 269
V+KA + +A + Y++
Sbjct: 306 VNKAKHVLSIISRMRVAPNARSYSI 330
>Medtr1g016220.1 | PPR containing plant-like protein | LC |
chr1:4264609-4263675 | 20130731
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKD-LARVIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ + + +++ C G A + K ++ I P+ + L+ +C +GK+EEA
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ + M + VVAY+++++ C + F +A+ + M R + +V +
Sbjct: 86 KNVLNTMMEKDLKSDVVAYSSLMN---GYCLVNEVF----KAQSIFKTMAERELSYDVRS 138
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N++I CK++ ++A+KLF M +P+ T+ LI L ++ RL E++D M
Sbjct: 139 YNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLSYAMELVDEMD 198
Query: 185 SAGFGASLDKKAYYQFLTILC 205
G ++ Y + +LC
Sbjct: 199 DRGEPPNI--ITYCPIVDVLC 217
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 117 GVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
G+ NV T+ LI C + K E+AL LF +M PN TF L+ + + ++EE
Sbjct: 26 GISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEA 85
Query: 177 DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLM 236
+++ M + D AY + C + V A +F M +++Y++++
Sbjct: 86 KNVLNTMMEKDLKS--DVVAYSSLMNGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMI 143
Query: 237 SKLGAHNRVDKANALFHE 254
++ VD+A LF E
Sbjct: 144 NEFCKMKMVDEAIKLFEE 161
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
+ P+E L++G+ G E+A + + G E+ V Y A+L C+ R +
Sbjct: 649 VSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQS-- 706
Query: 101 LLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTF 160
A V EM + +PRN +N+LI + +A L +M + G P+ T+
Sbjct: 707 -----ALAVTKEMSSKKIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTY 761
Query: 161 VVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV---EHALKVF 217
I + +A ++ ++I M++ G +L + T++ G R E ALK F
Sbjct: 762 TSFINACCKAGDMQNATQVIKEMEARGIKPNLK-----TYTTLIHGWARAAFPEKALKCF 816
Query: 218 AMMKADGCEPGIKTYDLLMSKL 239
+K G +P Y LM+ L
Sbjct: 817 EDLKVAGLKPDRAVYHCLMTSL 838
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 9/211 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
ML G+ A + ++ + G + V+ YN ++ C + + + ++
Sbjct: 518 MLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQR- 576
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+R R TF +I + +T AL++F M GC P T+ LI L +
Sbjct: 577 ---ERHRATTR---TFLPIIHGFARAGETRRALEIFDTMRRSGCIPTVHTYNALILGLVE 630
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
++E+ +++D M A G S ++ Y + + E A + F ++K DG E +
Sbjct: 631 KCQMEKALQILDEMNLA--GVSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDV 688
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
TY+ L+ R+ A A+ E S+ +
Sbjct: 689 YTYEALLKACCKSGRMQSALAVTKEMSSKKI 719
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 8/175 (4%)
Query: 3 RDYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMC-DMLIKGWCVDGKL 61
++ GL+ D + + +++ C G A + K+++ P ++LI GW G +
Sbjct: 680 KNDGLEIDVYTYEALLKACCKSGRMQSALAVTKEMSSKKIPRNTFVYNILIDGWARRGDV 739
Query: 62 EEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
EA L +M + G + + Y + ++ C+ ++ A +V+ EM+ RG+ N
Sbjct: 740 WEAADLMQQMRKEGVQPDIHTYTSFINACCKAGDMQN-------ATQVIKEMEARGIKPN 792
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEG 176
++T+ LI + E ALK F + G P+ + L+ SL A + +
Sbjct: 793 LKTYTTLIHGWARAAFPEKALKCFEDLKVAGLKPDRAVYHCLMTSLLSRATIAQS 847
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 108/275 (39%), Gaps = 30/275 (10%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL--------ARVIFPDEAMCDMLIKGWCV 57
GLK D +V+ C G A +VK + R P +I G+
Sbjct: 543 GLKPDVILYNNIVKAFCGMGNMDRAICIVKQMQRERHRATTRTFLP-------IIHGFAR 595
Query: 58 DGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG 117
G+ A + M R G V YNA++ + E C+ + +A ++L EM+ G
Sbjct: 596 AGETRRALEIFDTMRRSGCIPTVHTYNALILGLVEKCQME-------KALQILDEMNLAG 648
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
V N T+ L+ + TE A + F + G + T+ L+++ ++ R++
Sbjct: 649 VSPNEHTYTTLMQGYASLGDTEKAFQYFTILKNDGLEIDVYTYEALLKACCKSGRMQSAL 708
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEPGIKTYDL 234
+ M S + + + ++ G R V A + M+ +G +P I TY
Sbjct: 709 AVTKEMSSKKI-----PRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVQPDIHTYTS 763
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
++ + A + E ++RG+ K Y
Sbjct: 764 FINACCKAGDMQNATQVIKEMEARGIKPNLKTYTT 798
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
++ G+ + G E+ + + GF +V+Y +++ ++ + S+A ++
Sbjct: 449 MMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTKIGKV-------SKALEIS 501
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M G+ N++T+++L K++ +A +F + + G P+ + ++++
Sbjct: 502 RVMKTVGIKHNMKTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDVILYNNIVKAFCGM 561
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER---VEHALKVFAMMKADGCEP 227
++ ++ +M+ A+ FL I+ G R AL++F M+ GC P
Sbjct: 562 GNMDRAICIVKQMQRERHRATT-----RTFLPIIHGFARAGETRRALEIFDTMRRSGCIP 616
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYA 268
+ TY+ L+ L +++KA + E G V+P E+
Sbjct: 617 TVHTYNALILGLVEKCQMEKALQILDEMNLAG--VSPNEHT 655
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 9/207 (4%)
Query: 50 MLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKV 109
+++ G+ G + A E L V Y +++ C+ C+ AE +
Sbjct: 378 IIVGGFAKLGNADAADNWFKEAKESLPSLNAVIYGSIIYAHCQACKM-------GRAEAL 430
Query: 110 LVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQ 169
+ EM+ +G+ ++ ++ ++ I E L +F R+ E G P+ ++ LI +
Sbjct: 431 VREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFERLKECGFSPSIVSYGCLINLYTK 490
Query: 170 AARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGI 229
++ + E+ MK+ G ++ K Y ++ +A VF + DG +P +
Sbjct: 491 IGKVSKALEISRVMKTVGIKHNM--KTYSMLFNGFVKLKDWANAFSVFEDITKDGLKPDV 548
Query: 230 KTYDLLMSKLGAHNRVDKANALFHEAQ 256
Y+ ++ +D+A + + Q
Sbjct: 549 ILYNNIVKAFCGMGNMDRAICIVKQMQ 575
>Medtr4g094688.1 | PPR containing plant protein | HC |
chr4:38731040-38725816 | 20130731
Length = 1086
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 9/219 (4%)
Query: 44 DEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLH 103
D + +++I G+L+ A +L EM F G+ + +++D + + R
Sbjct: 286 DISTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFASLVDSMGKAGRL------- 338
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
A K+ +EM G + LI + K K E AL+L+ M G PN + ++
Sbjct: 339 DSAMKIYMEMRGYGYRPPPTIYVSLIESYVKSGKLETALRLWDEMKLAGFRPNFGLYTLI 398
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I S ++ +L+ M+ AGF + Y L + +++HA+K++ M
Sbjct: 399 IESHAKSGKLDIAMSAFSDMEKAGFLPT--PSTYACLLEMHAASGQIDHAMKLYNSMTNA 456
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAV 262
G PG+ TY +L+S L VD A + E ++ G +V
Sbjct: 457 GLRPGLSTYTVLLSLLANKKLVDVAAKVLLEMKTMGYSV 495
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 9/244 (3%)
Query: 25 GFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYN 84
G S + MV D C+ +I+ +LE A ++ G E+ YN
Sbjct: 197 GIQSLFDEMVGDPGNSGVSLVVSCNRVIRYLAKAERLEVAFCCFKKILDGCCEVDTETYN 256
Query: 85 AMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKL 144
+++ F ++ EK ++D + T+ ++I NL K + + A KL
Sbjct: 257 SLITLFLNKGLPYKAFEIYESMEKANCKLD-------ISTYELMIPNLAKSGRLDAAFKL 309
Query: 145 FHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTIL 204
F M P F L+ S+ +A RL+ ++ M+ G+G Y +
Sbjct: 310 FQEMKGRDFRPGLNIFASLVDSMGKAGRLDSAMKIYMEMR--GYGYRPPPTIYVSLIESY 367
Query: 205 CGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
++E AL+++ MK G P Y L++ ++D A + F + + G TP
Sbjct: 368 VKSGKLETALRLWDEMKLAGFRPNFGLYTLIIESHAKSGKLDIAMSAFSDMEKAGFLPTP 427
Query: 265 KEYA 268
YA
Sbjct: 428 STYA 431
>Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:37765859-37769483 | 20130731
Length = 724
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI + +++E + M GG++ + +NA+L + + + F A V
Sbjct: 135 LIHTFVEHCRIKEGLVVLVNMNSGGYKPPIQVFNALLGAIVK--EESGDF---QNALLVY 189
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM GV V+T N L+ L I + + AL F RM GC PN TF +L++ L +
Sbjct: 190 KEMVKAGVLPTVDTLNCLLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIEN 249
Query: 171 ARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIK 230
+++E +++ M D Y + + C +VE +++F MMK P
Sbjct: 250 GQVDEAVAVLEEM--LKLECQPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEAL 307
Query: 231 TYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKE 266
Y+ L+ L + ++D A L +E G + P E
Sbjct: 308 IYEALIQCLCKNLKLDSAVNLINEMIESG--ILPNE 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 30/215 (13%)
Query: 32 RMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC 91
RM+KD V P+ + + LI+ C + KL+ A L EM G + M++C C
Sbjct: 295 RMMKDSDLV--PEALIYEALIQCLCKNLKLDSAVNLINEMIESGILPNENVFVHMINCYC 352
Query: 92 ELCR--------------QKDPFLLHSE----AEKVLV------EMDYRGVPRNVETFNV 127
EL + + PF + E A K+LV M R + + +++N+
Sbjct: 353 ELGKIDEAIMFLEDKQVSETAPFNVLLEGCCNAGKILVANVLLETMTDRNIA-DCQSWNI 411
Query: 128 LITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAG 187
+I LC+ +TE A L RM ++ + +T+ L+ + +E E+ R+ +
Sbjct: 412 VIRRLCENEETEKAYTLLGRMIKFSVVLDGSTYSALVLGNCRVREYDEAMELFRRICARC 471
Query: 188 FGASLDKKAYYQFLTILC-GIERVEHALKVFAMMK 221
+ SLD +Y + + LC I R +HA++VF M
Sbjct: 472 W--SLDITSYTELVDGLCDDINRCQHAIEVFYYMS 504
>Medtr7g073260.1 | PPR containing plant-like protein | HC |
chr7:27362299-27360390 | 20130731
Length = 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 16/268 (5%)
Query: 10 DRGSLKVVVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLA 68
D S V+ LC G + A + + V + PD + LI+G+ +G+ E +
Sbjct: 250 DVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVL 309
Query: 69 GEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVL 128
M G ++ Y +L + + + F ++ E ++ E+D R L
Sbjct: 310 KMMKEHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEVDSR-------MMGTL 362
Query: 129 ITNLCKIRK-----TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRM 183
+ LCK+ EDA ++F +M E G ++ T V++ +L++ + +E +++
Sbjct: 363 VRRLCKLSWREKGLLEDACEVFEKMKERGLVVDKRTVEVMVEALFRGEKFDEA--LVNLN 420
Query: 184 KSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHN 243
+G SL+ A+ + + LCG RV+ A+ +++A+G ++ +L+++L AH
Sbjct: 421 DMVRWGYSLEGIAFEEVIEGLCGQGRVDEAVSTLLLLQANGGFLDRVSFGVLVNELNAHG 480
Query: 244 RVDKANALFHEAQSRGLA-VTPKEYAVD 270
RV A+ LF A G+ V KE D
Sbjct: 481 RVFCASFLFGVALKHGVVLVLNKELQAD 508
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 13/219 (5%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLE 62
+ L D + +++ CSK A+R++ + F PD A +LI C GK++
Sbjct: 139 SFHLVPDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLCKRGKVK 198
Query: 63 EARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNV 122
+A + + R G +LGV AYN +L + + R EA ++L++M + +V
Sbjct: 199 KAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRV-------DEAVEILMDMKTGNIGVDV 251
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
+++ ++ LCK+ ++++A++LF G P+ TF LI + R EG ++
Sbjct: 252 YSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEGVGVLKM 311
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMK 221
MK G A L + T+L G+ + ++ F + K
Sbjct: 312 MKEHGCVADL-----INYKTVLHGLLKWNETVEAFGVYK 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+ + FN L+ L +K + +F ++ + P+ T+ ++IR LEE +
Sbjct: 109 QTISDFNHLLMALVIAQKPDFCQTMFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRV 168
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
+ + GF D + LC +V+ A++VF ++ G + G++ Y+ L+ L
Sbjct: 169 LFTVLENGFEP--DSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGL 226
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYA 268
RVD+A + + ++ + V Y+
Sbjct: 227 AYVGRVDEAVEILMDMKTGNIGVDVYSYS 255
>Medtr7g017570.1 | PPR containing plant protein | HC |
chr7:5604657-5608116 | 20130731
Length = 890
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 70 EMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI 129
EM G + YN++L +C K + + A+K+L EMD+R + +V T+N +
Sbjct: 309 EMIANGLMPDRLTYNSLL----SVCASKGMWEM---AQKLLSEMDHRCIVPDVFTYNTYL 361
Query: 130 TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFG 189
LCK + + A ++F M +PN T+ ++ +A LE+ + + MK
Sbjct: 362 DTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLR--S 419
Query: 190 ASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKAN 249
LD+ +Y + I + ++ A++ M+ G + TY+ L+S G H D+
Sbjct: 420 VCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVR 479
Query: 250 ALFHEAQSRGLAVTPKEYAV 269
LF E ++R + Y+
Sbjct: 480 RLFEEMKARNIYPNTLTYST 499
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 31/260 (11%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEA 64
GL DR + ++ SKG A++++ ++ R I PD + + C G+++ A
Sbjct: 314 GLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLA 373
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSE-----------AEKVLV-- 111
RR+ EM VV Y+AM+D + +D L+ E + LV
Sbjct: 374 RRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGI 433
Query: 112 ---------------EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPN 156
EM+ G+ R+V T+N L++ K ++ +LF M YPN
Sbjct: 434 YEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPN 493
Query: 157 ETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKV 216
T+ +I + +E ++ K A +D Y + LC +E ++ +
Sbjct: 494 TLTYSTMIDMYTKGEMFQEAMDVYREFKMARL--EIDVVFYSAIIDTLCKNGLMESSIML 551
Query: 217 FAMMKADGCEPGIKTYDLLM 236
M G +P + T++ ++
Sbjct: 552 LMAMMEKGIKPNVVTFNSII 571
>Medtr2g022860.1 | membrane-associated salt-inducible protein | HC |
chr2:7962191-7960482 | 20130731
Length = 399
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 21/244 (8%)
Query: 26 FASYAERMVKDLARV---------IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
FA+ + K++ R+ I PD +++IK + G + EM R
Sbjct: 146 FAAILAKNHKEVTRIYLNFPRIYDIKPDVETYNLVIKSFAESGLSNSVFSILDEMDRSNV 205
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD--YRGVPRNVETFNVLITNLCK 134
+ VV N + + +K E K+L M+ Y+ P ++ T+NV I +LCK
Sbjct: 206 KPNVVTIN---NAISGFYNEKK----FDEVGKLLNLMEERYKLYP-SLSTYNVRIQSLCK 257
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
++++ +A LF M G PN ++ L+ + LEE + MK GF +D
Sbjct: 258 LKRSNEAKALFQGMITSGRKPNSVSYYHLMNGFCREGNLEEAKGLFADMKKRGF--KVDG 315
Query: 195 KAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHE 254
+ Y+ + LC + E AL + A G P T L++ L ++VD A L E
Sbjct: 316 QCYFTLVYFLCEGDEFEWALDIAKECIAKGWVPNFTTMKKLVNGLVGVSKVDDAKELIKE 375
Query: 255 AQSR 258
+ +
Sbjct: 376 IKEK 379
>Medtr7g005780.1 | PPR containing plant protein | HC |
chr7:352243-353694 | 20130731
Length = 422
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEAR 65
GL+++ S+ V+++ LC + F A + +L + P+ ++LI GWC
Sbjct: 147 GLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYVAPNAHTFNILIHGWC-------NI 199
Query: 66 RLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETF 125
RL ++ + + + C+L + P NV T+
Sbjct: 200 RLIPPLFNVIVKNIISTWFTTFSMKCKL----------------------KIAPPNVVTY 237
Query: 126 NVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKS 185
++ L K K ++AL++ RM GC P+ F I ++ +A R+++ + K
Sbjct: 238 TTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATHI---FKV 294
Query: 186 AGFGASL--DKKAYYQFLTILCGIERVEHALKVFAMMKADG-CEPGIKTY 232
A AS+ + Y +++ C + E A + M+ G C+P I+TY
Sbjct: 295 AMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTY 344
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 13/172 (7%)
Query: 105 EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLI 164
+A + ++ + G+ +N E+ NVL+ LCK + E A +++ + + PN TF +LI
Sbjct: 135 DAVRTFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYVA-PNAHTFNILI 193
Query: 165 RSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQ--------FLTILCGI---ERVEHA 213
+ +I + + + + K + + TI+C + E+ + A
Sbjct: 194 HGWCNIRLIPPLFNVIVKNIISTWFTTFSMKCKLKIAPPNVVTYTTIMCALAKAEKFDEA 253
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPK 265
L+V M A GC P ++ + +G R+D A +F A + +V P
Sbjct: 254 LQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATHIFKVAMPKA-SVAPN 304
>Medtr1g113010.1 | PPR containing plant-like protein | HC |
chr1:51277135-51279295 | 20130731
Length = 630
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
L+KG+ + G +EA E++ G ++ +AYN++LD + + + EA K+
Sbjct: 282 LMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNGK-------FDEAMKLF 334
Query: 111 VEMDYRGVPR-----NVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIR 165
M P N+ +FNV++ C K ++A+++F MGE C P+ +F LI
Sbjct: 335 NRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFKEAIEIFRSMGESRCKPDTLSFNNLIE 394
Query: 166 SLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGC 225
L + E +E+ M+ G G + D+ Y + R + A F M G
Sbjct: 395 QLCNNGMILEAEEVYGEME--GKGVNHDEYTYGLLMDTCFKENRPDDAASYFKKMVESGL 452
Query: 226 EPGIKTYDLLMSKLGAHNRVDKANALF 252
P + Y+ L+ L + D A + F
Sbjct: 453 RPNLAVYNRLVDGLVKVGKTDDAKSFF 479
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++++ G+C +GK +EA + M + +++N +++ +C + +L EAE+
Sbjct: 355 NVMVDGYCAEGKFKEAIEIFRSMGESRCKPDTLSFNNLIEQLC-----NNGMIL--EAEE 407
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
V EM+ +GV + T+ +L+ K + +DA F +M E G PN + L+ L
Sbjct: 408 VYGEMEGKGVNHDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLV 467
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+ + ++ D M +D +Y + +L +++ L++ M+ D
Sbjct: 468 KVGKTDDAKSFFDLMVKK---LKMDVASYQYMMKVLSKAGKLDDVLQIVDMLLDDN 520
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 13/191 (6%)
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSE--AEKVLVEMDYRGVPRNVETFNVLITNLCKIRK 137
VV YN ++D +C+ D + L+SE AEK+ +V TFN LI C I +
Sbjct: 17 VVMYNTIIDGLCKDKLVNDAYELYSEMIAEKI---------SPDVATFNSLIYGFCIIGQ 67
Query: 138 TEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAY 197
+DA LF +M P+ TF +L+ L + +++E +I M G ++ Y
Sbjct: 68 LKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNV--VTY 125
Query: 198 YQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQS 257
+ C + V VF + G P ++Y+++++ V++A LF E
Sbjct: 126 TSIMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCC 185
Query: 258 RGLAVTPKEYA 268
RG+ Y+
Sbjct: 186 RGIVPITVTYS 196
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 42/271 (15%)
Query: 25 GFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYN 84
F +++ ++K+ I P +L+ G C +GK++EA+ + M + G VV Y
Sbjct: 71 AFGLFSQMVLKN----INPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYT 126
Query: 85 AMLDCVCELCRQKDPFLLHSEAEK---VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDA 141
++++ C L +E K V + GV N +++N++I CKI+ +A
Sbjct: 127 SIMEGYC----------LVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEA 176
Query: 142 LKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFL 201
L LF M G P T+ LI L ++ L G + M+ L ++
Sbjct: 177 LILFKEMCCRGIVPITVTYSSLIDGLCKSTML--GSLL---MRCMLMVNHLIYPLTVLYI 231
Query: 202 TILC------------------GIER--VEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
LC GI+ +++A VF + G I+TY+++++ L
Sbjct: 232 DALCKSNHLDKAIALVKKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCK 291
Query: 242 HNRVDKANALFHEAQSRGLAVTPKEYAVDPR 272
D+A AL + G+ Y + R
Sbjct: 292 EGLFDEAEALLSKMDDYGIIPDAVTYETNIR 322
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 8/155 (5%)
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
V +V +N +I LCK + DA +L+ M P+ TF LI +L++
Sbjct: 13 VNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAF 72
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTI---LCGIERVEHALKVFAMMKADGCEPGIKTYDL 234
+ +M S+ Y F + LC +++ A V AMM DG P + TY
Sbjct: 73 GLFSQMVLKNINPSV-----YTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTS 127
Query: 235 LMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+M N V+K +F G+A + Y +
Sbjct: 128 IMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNI 162
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 92/218 (42%), Gaps = 46/218 (21%)
Query: 17 VVEKLCSKGFASYAERMVKDLARV-IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGG 75
++E C + + + + ++R+ + P+ +++I G+C + EA L EM G
Sbjct: 128 IMEGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRG 187
Query: 76 FELGVVAYNAMLDCVCE-----------------------------LCRQ---------- 96
V Y++++D +C+ LC+
Sbjct: 188 IVPITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALV 247
Query: 97 ---KDPFL---LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
KD + + A+ V ++ +G N++T+N++I LCK ++A L +M +
Sbjct: 248 KKIKDQGIQSDILKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDD 307
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF 188
+G P+ T+ IR+L+ E+ +++ +M + G
Sbjct: 308 YGIIPDAVTYETNIRALFHKDENEKAEKLFRKMIARGL 345
>Medtr2g060630.1 | PPR containing plant-like protein | HC |
chr2:25711944-25710341 | 20130731
Length = 497
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 30/270 (11%)
Query: 4 DYGLKR--DRGSLKVVVEKLCSKGFASYAERMV-KDLARVIF-PDEAMCDMLIKGWCVDG 59
++GL D + + ++ +C AE + ++L + F D ++++ GWCV G
Sbjct: 194 EFGLDNELDSKAFRTLLMWMCRYKHIEEAETLFHRNLNKFRFCRDIKTWNVILNGWCVLG 253
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
EA+RL + ++AY C++ + + E V +++
Sbjct: 254 NTHEAKRLWKD---------IIAYK---------CKE-----IGNCFEVVQWDVEEESCK 290
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V FN LI LC ++ +AL++FH M E C PN T+ LI+ L++ R+E+ E+
Sbjct: 291 PDVVIFNCLIDGLCFKKRIPEALQVFHDMKERDCLPNVATYNSLIKHLFKIRRMEKVYEL 350
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKL 239
++ M+ G L Y +L L ++ E V M+ +GC +L++
Sbjct: 351 VEDMERRS-GDCLPNGVTYSYL--LQSLKAPEEVPAVLERMERNGCAMSDDICNLILRLY 407
Query: 240 GAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
+ +D + E + GL + Y +
Sbjct: 408 MKWDDLDGLRKTWDEMERNGLGPDRRSYTI 437
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 123 ETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
E +N +I L K++ E+ ++ M + + NE TF +LIR A +LEE + R
Sbjct: 132 EVYNEIINILGKMKCFEELHQVLDEMSQRKEFINEETFCILIRRFVAAHKLEEAINIFYR 191
Query: 183 MKSAGFGASLDKKAYYQFLTILCGIERVEHALKVF--AMMKADGCEPGIKTYDLLMS 237
+ G LD KA+ L +C + +E A +F + K C IKT++++++
Sbjct: 192 REEFGLDNELDSKAFRTLLMWMCRYKHIEEAETLFHRNLNKFRFCR-DIKTWNVILN 247
>Medtr4g094245.2 | PPR containing plant-like protein | HC |
chr4:37513939-37510767 | 20130731
Length = 456
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 21 LC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
LC SK F + + + L + I PD+ +L+ WC GK+ EA++ EM GF
Sbjct: 187 LCESKLFHAAYALIRRMLRKGISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPP 246
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV-EMDYRGVPRNVETFNVLITNLCKIRKT 138
V + +++ + + E+ K +V +M G+ +V TFN L+ ++CK +
Sbjct: 247 VRGRDLLIEGLLNAG--------YIESAKGMVRKMVKEGIIPDVGTFNALMESICKCGED 298
Query: 139 ED--ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
E ++L+H + + G P+ T+ +L+ ++ + ++E +++ G
Sbjct: 299 EVKFCIELYHELCKLGMVPDVNTYKILVPAVSKIGFMDEAFRLLNNFSEE--GNRPFPSL 356
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR-VDKANALF 252
Y + L + + A FA MK G P Y +L++ G R VD AN LF
Sbjct: 357 YAPVMKALFKRGQFDDAFCFFADMKVKGHPPNRPLYTMLITMCGRGGRFVDAANYLF 413
>Medtr4g094245.1 | PPR containing plant-like protein | HC |
chr4:37513947-37510767 | 20130731
Length = 456
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 21 LC-SKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELG 79
LC SK F + + + L + I PD+ +L+ WC GK+ EA++ EM GF
Sbjct: 187 LCESKLFHAAYALIRRMLRKGISPDKHTYALLVNAWCSSGKMREAQQFLKEMSDKGFTPP 246
Query: 80 VVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV-EMDYRGVPRNVETFNVLITNLCKIRKT 138
V + +++ + + E+ K +V +M G+ +V TFN L+ ++CK +
Sbjct: 247 VRGRDLLIEGLLNAG--------YIESAKGMVRKMVKEGIIPDVGTFNALMESICKCGED 298
Query: 139 ED--ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKA 196
E ++L+H + + G P+ T+ +L+ ++ + ++E +++ G
Sbjct: 299 EVKFCIELYHELCKLGMVPDVNTYKILVPAVSKIGFMDEAFRLLNNFSEE--GNRPFPSL 356
Query: 197 YYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR-VDKANALF 252
Y + L + + A FA MK G P Y +L++ G R VD AN LF
Sbjct: 357 YAPVMKALFKRGQFDDAFCFFADMKVKGHPPNRPLYTMLITMCGRGGRFVDAANYLF 413
>Medtr3g091460.1 | PPR containing plant-like protein | HC |
chr3:41616039-41619290 | 20130731
Length = 631
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL-------H 103
L+KG+ + G +EA E++ G ++ +AYN++LD + + + + L H
Sbjct: 284 LMKGYFLKGMEKEAMECYQEVFVEGKKMSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEH 343
Query: 104 SEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVL 163
+ K+ V N+ +FNV++ C K ++A+++F MGE C P+ +F L
Sbjct: 344 NPPAKLAV---------NLGSFNVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNL 394
Query: 164 IRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKAD 223
I L + E +E+ M+ G G + D+ Y + R + A F M
Sbjct: 395 IEQLCNNGMILEAEEVYGEME--GKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVES 452
Query: 224 GCEPGIKTYDLLMSKLGAHNRVDKANALF 252
G P + Y+ L+ L ++D A F
Sbjct: 453 GLRPNLAVYNRLVDGLVKVGKIDDAKFFF 481
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
++++ G+C +GK +EA + M + +++N +++ +C + +L EAE+
Sbjct: 357 NVMVDGYCAEGKFKEAIEVFRSMGESRCKPDTLSFNNLIEQLC-----NNGMIL--EAEE 409
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
V EM+ +GV + T+ +L+ K + +DA F +M E G PN + L+ L
Sbjct: 410 VYGEMEGKGVNPDEYTYGLLMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLV 469
Query: 169 QAARLEEG----DEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADG 224
+ ++++ D M+ ++K +D +Y + +L R++ L++ M+ D
Sbjct: 470 KVGKIDDAKFFFDLMVKKLK-------MDVASYQFMMKVLSEAGRLDDVLQIVNMLLDDN 522
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + V+ L GF +E+++ ++ P+E L+ + ++E
Sbjct: 552 GVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERM 611
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L E+Y G E V ++ L K L+ E E+ E+ RG+ + T
Sbjct: 612 KALGEEIYSGSIETHPVLLKTLV-----LVSSKSDLLM--ETERAFFELKERGITPGLTT 664
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
N +I+ + + A ++ + M E G P+ TT+ L+ ++ + ++ +E++ +
Sbjct: 665 LNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVL 724
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
G DK +Y + C R++ AL++F+ MK P + TY+ ++ A
Sbjct: 725 KKGMKP--DKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAA 779
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGE 70
++ V+V L G S A ++K L F D LI + G+ +A + +
Sbjct: 207 SAIAVIVNILGKAGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNK 266
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M R G +V YN++L+ ++ + S + M GV ++ T+N LIT
Sbjct: 267 MQRDGCTPTLVTYNSILNVYGKMG------MSWSRVTAIFDSMKTNGVVPDLYTYNTLIT 320
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+ E+ + +F ++ G P+ T+ L+ +A R +E +++ M+S GF
Sbjct: 321 CCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSP 380
Query: 191 SL------------------------------DKKAYYQFLTILCGIERV---EHALKVF 217
++ K + + T+L G E+ E A +V+
Sbjct: 381 TIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVY 440
Query: 218 AMMKADGCEPGIKTYDLLMSKLG 240
MKA GC+P I T++ L+ G
Sbjct: 441 DEMKAAGCKPNICTFNALIKMHG 463
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + L+ + + +EA ++ +M GF ++ YN+++ + +L
Sbjct: 345 PDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISA-----HVRGGWL- 398
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA ++ V+M +G+ +V T+ L++ K K E A +++ M GC PN TF
Sbjct: 399 -EEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNA 457
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ E ++ + +K G S D + L + + VF MK
Sbjct: 458 LIKMHGNRGMFVEMMKVFEEIKEC--GCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR 515
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
G P T++ L+S D+A A++ G++
Sbjct: 516 SGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVS 554
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 101/293 (34%), Gaps = 41/293 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G DR + +++ A +++KD+ F P + LI G LEEA
Sbjct: 342 GFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEA 401
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL +M G + V Y +L + KD F A +V EM G N+ T
Sbjct: 402 SRLKVQMVEKGIKPDVFTYTTLLSGFEKAG--KDEF-----AFEVYDEMKAAGCKPNICT 454
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI + +K+F + E GC P+ T+ L+ E + MK
Sbjct: 455 FNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMK 514
Query: 185 SAGF---------------------------------GASLDKKAYYQFLTILCGIERVE 211
+GF G S D Y L L E
Sbjct: 515 RSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWE 574
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
+ K+ A MK C P TY L+ +++ AL E S + P
Sbjct: 575 QSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHP 627
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 10/237 (4%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEA 64
G+ D + V+ L GF +E+++ ++ P+E L+ + ++E
Sbjct: 552 GVSPDLSTYNAVLAALARGGFWEQSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERM 611
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
+ L E+Y G E V ++ L K L+ E E+ E+ RG+ + T
Sbjct: 612 KALGEEIYSGSIETHPVLLKTLV-----LVSSKSDLLM--ETERAFFELKERGITPGLTT 664
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
N +I+ + + A ++ + M E G P+ TT+ L+ ++ + ++ +E++ +
Sbjct: 665 LNAMISIYGRKQVVSKANEILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVL 724
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
G DK +Y + C R++ AL++F+ MK P + TY+ ++ A
Sbjct: 725 KKGMKP--DKVSYNTVIYAYCRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAA 779
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 40/263 (15%)
Query: 12 GSLKVVVEKLCSKGFASYAERMVKDLARVIFP-DEAMCDMLIKGWCVDGKLEEARRLAGE 70
++ V+V L G S A ++K L F D LI + G+ +A + +
Sbjct: 207 SAIAVIVNILGKAGRVSSAASLLKTLENDGFEIDVYAYTCLITAYASKGRYNDAVSVFNK 266
Query: 71 MYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLIT 130
M R G +V YN++L+ ++ + S + M GV ++ T+N LIT
Sbjct: 267 MQRDGCTPTLVTYNSILNVYGKMG------MSWSRVTAIFDSMKTNGVVPDLYTYNTLIT 320
Query: 131 NLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGA 190
+ E+ + +F ++ G P+ T+ L+ +A R +E +++ M+S GF
Sbjct: 321 CCRRGSLYEEVVNVFDQIKSAGFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSP 380
Query: 191 SL------------------------------DKKAYYQFLTILCGIERV---EHALKVF 217
++ K + + T+L G E+ E A +V+
Sbjct: 381 TIITYNSLISAHVRGGWLEEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVY 440
Query: 218 AMMKADGCEPGIKTYDLLMSKLG 240
MKA GC+P I T++ L+ G
Sbjct: 441 DEMKAAGCKPNICTFNALIKMHG 463
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PD + L+ + + +EA ++ +M GF ++ YN+++ + +L
Sbjct: 345 PDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISA-----HVRGGWL- 398
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
EA ++ V+M +G+ +V T+ L++ K K E A +++ M GC PN TF
Sbjct: 399 -EEASRLKVQMVEKGIKPDVFTYTTLLSGFEKAGKDEFAFEVYDEMKAAGCKPNICTFNA 457
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI+ E ++ + +K G S D + L + + VF MK
Sbjct: 458 LIKMHGNRGMFVEMMKVFEEIKEC--GCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKR 515
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
G P T++ L+S D+A A++ G++
Sbjct: 516 SGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVS 554
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 101/293 (34%), Gaps = 41/293 (13%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G DR + +++ A +++KD+ F P + LI G LEEA
Sbjct: 342 GFVPDRVTYNALLDVFAKARRPKEALQVLKDMESNGFSPTIITYNSLISAHVRGGWLEEA 401
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVET 124
RL +M G + V Y +L + KD F A +V EM G N+ T
Sbjct: 402 SRLKVQMVEKGIKPDVFTYTTLLSGFEKAG--KDEF-----AFEVYDEMKAAGCKPNICT 454
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
FN LI + +K+F + E GC P+ T+ L+ E + MK
Sbjct: 455 FNALIKMHGNRGMFVEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMK 514
Query: 185 SAGF---------------------------------GASLDKKAYYQFLTILCGIERVE 211
+GF G S D Y L L E
Sbjct: 515 RSGFVPERDTFNTLISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWE 574
Query: 212 HALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTP 264
+ K+ A MK C P TY L+ +++ AL E S + P
Sbjct: 575 QSEKIIAEMKDGRCRPNELTYSSLLHAYANGKEIERMKALGEEIYSGSIETHP 627
>Medtr8g080940.1 | PPR containing plant-like protein | HC |
chr8:34956434-34962226 | 20130731
Length = 1058
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ +I + GK E+A L + G +LG V + +++ + + + EAEK
Sbjct: 701 NSMIDAFAKCGKQEKAYLLYKQATVKGLDLGAVGISIIVNALTNEAK-------YQEAEK 753
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ + V + +N I ++ + K A +F RM G P+ T+ +I
Sbjct: 754 IISQCLEENVKLDTVAYNTFIKSMLEAGKLHFASSIFERMCSNGVAPSIQTYNTMISVYG 813
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ +L+ EM ++ +S G LD+KAY + V A ++F+ M+ +G +PG
Sbjct: 814 KYHKLDRAVEMFNKARS--LGVPLDEKAYMNLIGYYGKAGMVREASQLFSKMQEEGIKPG 871
Query: 229 IKTYDLLM---SKLGAHNRVDKANALFHEAQ 256
+Y++++ + +G H+ V+K LF Q
Sbjct: 872 KISYNIMIYVYANVGVHHEVEK---LFQAMQ 899
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++ + K +EA ++ + +L VAYN + + E + LH A
Sbjct: 736 SIIVNALTNEAKYQEAEKIISQCLEENVKLDTVAYNTFIKSMLEAGK------LHF-ASS 788
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ M GV +++T+N +I+ K K + A+++F++ G +E ++ LI
Sbjct: 789 IFERMCSNGVAPSIQTYNTMISVYGKYHKLDRAVEMFNKARSLGVPLDEKAYMNLIGYYG 848
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL-KVFAMMKADGCEP 227
+A + E ++ +M+ G K Y + + V H + K+F M+ C P
Sbjct: 849 KAGMVREASQLFSKMQEEGIKPG---KISYNIMIYVYANVGVHHEVEKLFQAMQRQDCLP 905
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
TY L+ KA H QS+G++
Sbjct: 906 DSSTYLSLVKAYTESLNYSKAEETIHSMQSQGIS 939
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 9/225 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PDE +C ++ + G+ + + G L V +N ML + QK L
Sbjct: 210 PDEVICGTMLCSYARWGRHKSMLSFYSAVKERGIILSVAVFNFMLSSL-----QKKS--L 262
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H E V +M +GV + T+ V+I++L K R EDA F M +G P+E+T+ +
Sbjct: 263 HREVVHVWRDMVTKGVVPDHFTYTVVISSLVKERLHEDAFVTFDEMKNYGFVPDESTYNL 322
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + + +E ++ D M+ G S A +++ E L +F+ M
Sbjct: 323 LINLIAKNGNRDEVQKLYDDMRFRGVAPSNYTCA--TLISLYYKYEDYPRVLSLFSEMAR 380
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ Y LL+ G +A F + + L K Y
Sbjct: 381 NKIPADEVIYGLLIRVYGKLGLYKEACETFEKIKHLDLLTNEKTY 425
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I K K E A L+ + G +++ +L A+ +E +++I +
Sbjct: 700 YNSMIDAFAKCGKQEKAYLLYKQATVKGLDLGAVGISIIVNALTNEAKYQEAEKIISQCL 759
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
LD AY F+ + ++ A +F M ++G P I+TY+ ++S G +++
Sbjct: 760 EEN--VKLDTVAYNTFIKSMLEAGKLHFASSIFERMCSNGVAPSIQTYNTMISVYGKYHK 817
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
+D+A +F++A+S G+ + K Y
Sbjct: 818 LDRAVEMFNKARSLGVPLDEKAY 840
>Medtr3g108060.1 | PPR containing plant-like protein | HC |
chr3:49927588-49930323 | 20130731
Length = 441
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 86/206 (41%), Gaps = 14/206 (6%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFEL--GVVAYNAMLDCVCEL------C 94
PD + LI C G +AR L +M GF V Y ++ C C
Sbjct: 186 PDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFTYTVLISSYCRYGVKISGC 245
Query: 95 RQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY 154
R+ L+ EA ++ M ++G+ +V +N LI CK + AL+LF M + GC
Sbjct: 246 RKAVRRRLY-EANRLFRIMVFKGIVPDVVAYNALIDGCCKTYRVGRALELFDDMKKRGCV 304
Query: 155 PNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGF----GASLDK-KAYYQFLTILCGIER 209
PN T+ IR +++ E + M+ + + G + +Y + LC + R
Sbjct: 305 PNRVTYDSFIRYYSVVNEIDKAVEFLREMQRSNYDGENGIVVGSCSSYTPIIHALCEVGR 364
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLL 235
V A + +G P TY L+
Sbjct: 365 VADAWSFLVELIDNGSVPREYTYKLV 390
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 65/169 (38%), Gaps = 16/169 (9%)
Query: 102 LHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCY--PNETT 159
L EA M G +V+ +N LI +C + A L +M G + P+ T
Sbjct: 168 LAKEALLTFYRMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFT 227
Query: 160 FVVLIRSLYQAA------------RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGI 207
+ VLI S + RL E + + M G D AY + C
Sbjct: 228 YTVLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVP--DVVAYNALIDGCCKT 285
Query: 208 ERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQ 256
RV AL++F MK GC P TYD + N +DKA E Q
Sbjct: 286 YRVGRALELFDDMKKRGCVPNRVTYDSFIRYYSVVNEIDKAVEFLREMQ 334
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 139 EDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYY 198
++AL F+RM ++GC P+ + LI ++ + ++ +M+ GF + D Y
Sbjct: 170 KEALLTFYRMRQFGCKPDVQAYNALINAMCSVGNFTKARHLLQQMELPGFHSPPDVFTYT 229
Query: 199 QFLTILC--GIE----------RVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVD 246
++ C G++ R+ A ++F +M G P + Y+ L+ RV
Sbjct: 230 VLISSYCRYGVKISGCRKAVRRRLYEANRLFRIMVFKGIVPDVVAYNALIDGCCKTYRVG 289
Query: 247 KANALFHEAQSRG 259
+A LF + + RG
Sbjct: 290 RALELFDDMKKRG 302
>Medtr1g114300.1 | PPR containing plant-like protein | HC |
chr1:51588477-51583476 | 20130731
Length = 553
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 12/230 (5%)
Query: 31 ERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCV 90
++++ D + PD+ M +M+I + G E+AR+ M G + V YN+++
Sbjct: 234 DKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVTYNSLMSFE 293
Query: 91 CELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
+ E + +M + +V ++ +LI K R+ E+AL +F M +
Sbjct: 294 TN----------YKEVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLD 343
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERV 210
G P + +L+ + + +E+ + M+ + L +Y L+ +
Sbjct: 344 AGVRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDL--CSYTTMLSAYVNAPDM 401
Query: 211 EHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
E A K F + DG EP + TY L+ N ++K + E RG+
Sbjct: 402 EGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGI 451
>Medtr1g010020.1 | PPR containing plant-like protein | HC |
chr1:1683523-1688017 | 20130731
Length = 726
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 17/263 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYAERMV----KDLARVIFPDEAMCDMLIKGWCVDG 59
+ G++ +R + ++V LC KG A M+ D PD L+ + +G
Sbjct: 209 NTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNG 268
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K +A L EM + ++ VVAYN +++ VC R + L + A EM +G+
Sbjct: 269 KSNQALGLWNEMIQKCTKVDVVAYNVLINGVC---RNQQMHLAYGYA----CEMLKKGLI 321
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V T+N+LI LCK K +A LF M + P++ ++ ++I L + ++
Sbjct: 322 PDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDL 381
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMKADGCEPGIKTYD-LLMS 237
+ M + + + + + G E + +A M A G P + TY+ L+++
Sbjct: 382 LLCMLN---NFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILA 438
Query: 238 KLGAHNRVDKANALFHEAQSRGL 260
+L + N + A++L E +++ L
Sbjct: 439 QLKSGN-IHNAHSLKEEMRTKNL 460
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 43/237 (18%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
I+ C++GKL A L +M G V +N +++ +CE R ++ A+ ++
Sbjct: 118 IRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMEN-------ADFLVR 170
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M G N T+N LI + TE A LF M G PN T +++R+L +
Sbjct: 171 QMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKG 230
Query: 172 RLEEGDEMIDRMKSAGFGAS------------------------------------LDKK 195
LE+ M+D++ + G + +D
Sbjct: 231 HLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVV 290
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
AY + +C +++ A M G P + TY++L+ L ++ +A LF
Sbjct: 291 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLF 347
>Medtr1g010020.2 | PPR containing plant-like protein | HC |
chr1:1683287-1686329 | 20130731
Length = 589
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
Query: 4 DYGLKRDRGSLKVVVEKLCSKGFASYA----ERMVKDLARVIFPDEAMCDMLIKGWCVDG 59
+ G++ +R + ++V LC KG A ++++ D PD L+ + +G
Sbjct: 228 NTGIQPNRVTCNIIVRALCEKGHLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNG 287
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVP 119
K +A L EM + ++ VVAYN +++ VC R + L + A EM +G+
Sbjct: 288 KSNQALGLWNEMIQKCTKVDVVAYNVLINGVC---RNQQMHLAYGYA----CEMLKKGLI 340
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
+V T+N+LI LCK K +A LF M + P++ ++ ++I L + ++
Sbjct: 341 PDVFTYNILIHALCKEGKISEACYLFGVMSKMRIIPDQISYKMMIHGLCLNGDVLRAKDL 400
Query: 180 IDRMKSAGFGASLDKKAYYQFLTILCG-IERVEHALKVFAMMKADGCEPGIKTYD-LLMS 237
+ M + + + + + G E + +A M A G P + TY+ L+++
Sbjct: 401 LLCMLN---NFMVPQAIIWNLIIDSYGRCEDLRNAFLTRDQMLASGVLPNVFTYNALILA 457
Query: 238 KLGAHNRVDKANALFHEAQSRGL 260
+L + N + A++L E +++ L
Sbjct: 458 QLKSGN-IHNAHSLKEEMRTKNL 479
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 43/237 (18%)
Query: 52 IKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLV 111
I+ C++GKL A L +M G V +N +++ +CE R ++ A+ ++
Sbjct: 137 IRFLCLEGKLAAAWWLRIKMMEKGVLPDVYTHNHIVNGLCENGRMEN-------ADFLVR 189
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M G N T+N LI + TE A LF M G PN T +++R+L +
Sbjct: 190 QMLKSGPHPNCITYNTLIKGYYAVHNTEKADDLFRTMSNTGIQPNRVTCNIIVRALCEKG 249
Query: 172 RLEEGDEMIDRMKSAGFGAS------------------------------------LDKK 195
LE+ M+D++ + G + +D
Sbjct: 250 HLEKARNMLDKILNDDNGEATPDLVASTTLMDNYFKNGKSNQALGLWNEMIQKCTKVDVV 309
Query: 196 AYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALF 252
AY + +C +++ A M G P + TY++L+ L ++ +A LF
Sbjct: 310 AYNVLINGVCRNQQMHLAYGYACEMLKKGLIPDVFTYNILIHALCKEGKISEACYLF 366
>Medtr8g080940.2 | PPR containing plant-like protein | HC |
chr8:34956441-34962226 | 20130731
Length = 856
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ +I + GK E+A L + G +LG V + +++ + + + EAEK
Sbjct: 499 NSMIDAFAKCGKQEKAYLLYKQATVKGLDLGAVGISIIVNALTNEAK-------YQEAEK 551
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ + V + +N I ++ + K A +F RM G P+ T+ +I
Sbjct: 552 IISQCLEENVKLDTVAYNTFIKSMLEAGKLHFASSIFERMCSNGVAPSIQTYNTMISVYG 611
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
+ +L+ EM ++ +S G LD+KAY + V A ++F+ M+ +G +PG
Sbjct: 612 KYHKLDRAVEMFNKARS--LGVPLDEKAYMNLIGYYGKAGMVREASQLFSKMQEEGIKPG 669
Query: 229 IKTYDLLM---SKLGAHNRVDKANALFHEAQ 256
+Y++++ + +G H+ V+K LF Q
Sbjct: 670 KISYNIMIYVYANVGVHHEVEK---LFQAMQ 697
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 11/214 (5%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+++ + K +EA ++ + +L VAYN + + E + LH A
Sbjct: 534 SIIVNALTNEAKYQEAEKIISQCLEENVKLDTVAYNTFIKSMLEAGK------LHF-ASS 586
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
+ M GV +++T+N +I+ K K + A+++F++ G +E ++ LI
Sbjct: 587 IFERMCSNGVAPSIQTYNTMISVYGKYHKLDRAVEMFNKARSLGVPLDEKAYMNLIGYYG 646
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL-KVFAMMKADGCEP 227
+A + E ++ +M+ G K Y + + V H + K+F M+ C P
Sbjct: 647 KAGMVREASQLFSKMQEEGIKPG---KISYNIMIYVYANVGVHHEVEKLFQAMQRQDCLP 703
Query: 228 GIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
TY L+ KA H QS+G++
Sbjct: 704 DSSTYLSLVKAYTESLNYSKAEETIHSMQSQGIS 737
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 9/225 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
PDE +C ++ + G+ + + G L V +N ML + QK L
Sbjct: 8 PDEVICGTMLCSYARWGRHKSMLSFYSAVKERGIILSVAVFNFMLSSL-----QKKS--L 60
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
H E V +M +GV + T+ V+I++L K R EDA F M +G P+E+T+ +
Sbjct: 61 HREVVHVWRDMVTKGVVPDHFTYTVVISSLVKERLHEDAFVTFDEMKNYGFVPDESTYNL 120
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
LI + + +E ++ D M+ G S A +++ E L +F+ M
Sbjct: 121 LINLIAKNGNRDEVQKLYDDMRFRGVAPSNYTCA--TLISLYYKYEDYPRVLSLFSEMAR 178
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEY 267
+ Y LL+ G +A F + + L K Y
Sbjct: 179 NKIPADEVIYGLLIRVYGKLGLYKEACETFEKIKHLDLLTNEKTY 223
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 125 FNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
+N +I K K E A L+ + G +++ +L A+ +E +++I +
Sbjct: 498 YNSMIDAFAKCGKQEKAYLLYKQATVKGLDLGAVGISIIVNALTNEAKYQEAEKIISQCL 557
Query: 185 SAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNR 244
LD AY F+ + ++ A +F M ++G P I+TY+ ++S G +++
Sbjct: 558 EEN--VKLDTVAYNTFIKSMLEAGKLHFASSIFERMCSNGVAPSIQTYNTMISVYGKYHK 615
Query: 245 VDKANALFHEAQSRGLAVTPKEY 267
+D+A +F++A+S G+ + K Y
Sbjct: 616 LDRAVEMFNKARSLGVPLDEKAY 638
>Medtr1g008310.1 | PPR containing plant-like protein | HC |
chr1:854624-850741 | 20130731
Length = 636
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEARRLAGEMYR-G 74
V+ G A++ V+ + F P LIKG+ + GK EA +L M G
Sbjct: 150 VINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDG 209
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCK 134
+ + YN ++ +C+ SEA ++ +M G+ + TFN +
Sbjct: 210 NSKPDLQTYNMLIKALCQSGNM-------SEAWNIVCKMPASGMLPDSVTFNTMAIGYVL 262
Query: 135 IRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDK 194
+T +A + M G PNE TF V++ Y+ +++E + + R+K GF +L
Sbjct: 263 NSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNL-- 320
Query: 195 KAYYQFLTILCG-IERVEH--ALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
F ++ G ++R++ +V +MK +P + TY +M+ DK +
Sbjct: 321 ---LVFNVLINGFVDRMDRDGVDEVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQI 377
Query: 252 FHEAQSRGLAVTPKEYAV 269
F G+ Y++
Sbjct: 378 FDNMLQSGVKPDVHAYSI 395
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 32 RMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC 91
R++K+ I PD ++ W G ++ +++ M + G + V AY+ ++
Sbjct: 344 RLMKEFQ--IQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYV 401
Query: 92 ELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEW 151
+ +AE++L +M GV NV TF +I+ + ++A+K+F +M E
Sbjct: 402 RSMETE-------KAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCEL 454
Query: 152 GCYPNETTFVVLIRSLYQAARLEEGDEMIDRMK 184
G PN TF LI +A + + +E++ M+
Sbjct: 455 GVSPNLRTFEALIWGYAKADQPWKSEEILQLME 487
>Medtr1g100593.1 | PPR containing plant-like protein | HC |
chr1:45524249-45521592 | 20130731
Length = 501
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 18/213 (8%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC------------ELCRQKDPFLLHSEA 106
GK+++ L GEM R GF YN +L + +L ++K+ F +A
Sbjct: 281 GKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKEDLGKEKEQF----KA 336
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
K+L M G+ V F LI + K + F+ M + GC P+ + V+I
Sbjct: 337 LKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITG 396
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
A LE+ EM + M S ++ Y + LC + + A +F M+ GC
Sbjct: 397 YVVARELEKAQEMFEEMLSKELVPNV--FTYNSMIRGLCMAGKFDEACSMFKEMERKGCS 454
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
P Y L+S L RV A + + G
Sbjct: 455 PNSVVYITLVSCLRNAGRVADAREVIKQMTETG 487
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G+ GKL+ + EM + G VVAY M+ + R+ + +A+++
Sbjct: 358 LIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYV-VARELE------KAQEMF 410
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM + + NV T+N +I LC K ++A +F M GC PN ++ L+ L A
Sbjct: 411 EEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNA 470
Query: 171 ARLEEGDEMIDRMKSAGFGASL 192
R+ + E+I +M G A L
Sbjct: 471 GRVADAREVIKQMTETGKYAHL 492
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI---- 129
GGF ++ YN ++ L + L L EMD G + T+N+L+
Sbjct: 261 GGFSSDILTYNIVIYAKYRLGKVDQVLTL-------LGEMDRNGFSPDFHTYNILLHAIS 313
Query: 130 -----------TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+L K ++ ALKL + M E G P F LI +A +L+
Sbjct: 314 KGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQY 373
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ MK G D AY +T +E A ++F M + P + TY+ ++
Sbjct: 374 FFNEMKKNG--CMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRG 431
Query: 239 LGAHNRVDKANALFHEAQSRG 259
L + D+A ++F E + +G
Sbjct: 432 LCMAGKFDEACSMFKEMERKG 452
>Medtr1g100593.2 | PPR containing plant-like protein | HC |
chr1:45524249-45520736 | 20130731
Length = 501
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 18/213 (8%)
Query: 59 GKLEEARRLAGEMYRGGFELGVVAYNAMLDCVC------------ELCRQKDPFLLHSEA 106
GK+++ L GEM R GF YN +L + +L ++K+ F +A
Sbjct: 281 GKVDQVLTLLGEMDRNGFSPDFHTYNILLHAISKGDIGKGDLDKEDLGKEKEQF----KA 336
Query: 107 EKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRS 166
K+L M G+ V F LI + K + F+ M + GC P+ + V+I
Sbjct: 337 LKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITG 396
Query: 167 LYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCE 226
A LE+ EM + M S ++ Y + LC + + A +F M+ GC
Sbjct: 397 YVVARELEKAQEMFEEMLSKELVPNV--FTYNSMIRGLCMAGKFDEACSMFKEMERKGCS 454
Query: 227 PGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
P Y L+S L RV A + + G
Sbjct: 455 PNSVVYITLVSCLRNAGRVADAREVIKQMTETG 487
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G+ GKL+ + EM + G VVAY M+ + R+ + +A+++
Sbjct: 358 LIDGFSRAGKLDACQYFFNEMKKNGCMPDVVAYTVMITGYV-VARELE------KAQEMF 410
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
EM + + NV T+N +I LC K ++A +F M GC PN ++ L+ L A
Sbjct: 411 EEMLSKELVPNVFTYNSMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNA 470
Query: 171 ARLEEGDEMIDRMKSAGFGASL 192
R+ + E+I +M G A L
Sbjct: 471 GRVADAREVIKQMTETGKYAHL 492
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 24/201 (11%)
Query: 74 GGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLI---- 129
GGF ++ YN ++ L + L L EMD G + T+N+L+
Sbjct: 261 GGFSSDILTYNIVIYAKYRLGKVDQVLTL-------LGEMDRNGFSPDFHTYNILLHAIS 313
Query: 130 -----------TNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDE 178
+L K ++ ALKL + M E G P F LI +A +L+
Sbjct: 314 KGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAGKLDACQY 373
Query: 179 MIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
+ MK G D AY +T +E A ++F M + P + TY+ ++
Sbjct: 374 FFNEMKKNG--CMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYNSMIRG 431
Query: 239 LGAHNRVDKANALFHEAQSRG 259
L + D+A ++F E + +G
Sbjct: 432 LCMAGKFDEACSMFKEMERKG 452
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 14/212 (6%)
Query: 60 KLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRG-- 117
K+++A ++ GEM G L C+CE+ R D A K + + G
Sbjct: 780 KIDDALKIYGEMVNSGHVPDKELIETYLGCLCEMGRILD-------ARKCIDSLQRFGYT 832
Query: 118 VPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGD 177
VP +++ I LC+ K E+ALKL +G + T+ ++ L Q +LEE
Sbjct: 833 VPL---CYSLFIRALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEAL 889
Query: 178 EMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMS 237
+ RMK G ++ Y + + VE A++++A M G EP + TY L+
Sbjct: 890 TKVSRMKQEGITPTI--HVYTSLIVHFFKQKHVEKAIQIYAEMLESGYEPNVVTYSALIR 947
Query: 238 KLGAHNRVDKANALFHEAQSRGLAVTPKEYAV 269
R + A +F+ + +G K Y++
Sbjct: 948 GYMNVGRYNDAWNVFYRMKFKGPFPDFKTYSM 979
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 21 LCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGV 80
LC G A + + L R + + I+ C GK+EEA +L E+ +
Sbjct: 810 LCEMGRILDARKCIDSLQRFGYTVPLCYSLFIRALCRAGKVEEALKLVEEVGAEKINVEK 869
Query: 81 VAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTED 140
+ Y +++ + QK EA + M G+ + + LI + K + E
Sbjct: 870 LTYGSIVHGLL----QKGKL---EEALTKVSRMKQEGITPTIHVYTSLIVHFFKQKHVEK 922
Query: 141 ALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQF 200
A++++ M E G PN T+ LIR R + + RMK G D K Y F
Sbjct: 923 AIQIYAEMLESGYEPNVVTYSALIRGYMNVGRYNDAWNVFYRMKFK--GPFPDFKTYSMF 980
Query: 201 LTILCGIERVEHALKVFAMMKADGCEPGIKTY 232
L+ LC R E A+++ + M G P +
Sbjct: 981 LSCLCKAGRSEEAMRLISEMLESGIVPSTINF 1012
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 110/292 (37%), Gaps = 45/292 (15%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLAR--VIFPDEAMCDMLIKGWCVDGKLEE 63
G + D S + ++ LCS G A KD+ + ++ D + ML+ G +
Sbjct: 266 GCEPDVVSYRTIIRLLCSSGKGDIAMEFYKDMVKKDIVLDDVRLYKMLMNCMAESGDVAA 325
Query: 64 ARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVE 123
L +M R + ML C R K EA +++ ++ Y+ E
Sbjct: 326 VNLLGNDMTRLCLMPENSVFGCMLKSFCISGRIK-------EALELIRDLKYKDAVLEPE 378
Query: 124 TFNVLITNLCKIRKTEDALKL----------------------------------FHRMG 149
F L+ LCK + DAL++ F M
Sbjct: 379 YFETLVRGLCKAGRISDALEIVEIMKRRDIVVWNVQGIIINGYLRRNDFCMALDVFQSMK 438
Query: 150 EWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIER 209
E G P +++ LI+ L++ +R EE M D M G G D A + R
Sbjct: 439 ESGYVPTVSSYTELIQHLFKLSRYEEACMMYDEM--LGKGIKPDIVAMTAMVAGHVSQNR 496
Query: 210 VEHALKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLA 261
+ A K+F M++ G + K+Y + + +L +R D + +E +S +
Sbjct: 497 ISEAWKIFKSMESQGIKATGKSYSVFIKELCKASRTDDIVKVLYEMRSSKIV 548
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 16 VVVEKLCSKGFASYAERMVKDL-ARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRG 74
+ + LC G A ++V+++ A I ++ ++ G GKLEEA M +
Sbjct: 839 LFIRALCRAGKVEEALKLVEEVGAEKINVEKLTYGSIVHGLLQKGKLEEALTKVSRMKQE 898
Query: 75 GFELGVVAYNAMLDCVCELCRQKDPFLLHSE-AEKVLVEMDYRGVPRNVETFNVLITNLC 133
G + Y ++ + +QK H E A ++ EM G NV T++ LI
Sbjct: 899 GITPTIHVYTSL---IVHFFKQK-----HVEKAIQIYAEMLESGYEPNVVTYSALIRGYM 950
Query: 134 KIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLD 193
+ + DA +F+RM G +P+ T+ + + L +A R EE +I M +G S
Sbjct: 951 NVGRYNDAWNVFYRMKFKGPFPDFKTYSMFLSCLCKAGRSEEAMRLISEMLESGIVPST- 1009
Query: 194 KKAYYQFLTILCGIER 209
F T+ G+ R
Sbjct: 1010 ----INFRTVFYGLNR 1021
>Medtr7g104640.1 | PPR containing plant-like protein | HC |
chr7:42407659-42406202 | 20130731
Length = 485
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML- 87
+ +MVKD + PD ++LI G+C D K A + EM + G VV +N ++
Sbjct: 200 FYNQMVKDRIK---PDVFTFNILISGYCRDFKFGFALEMFDEMRKMGCHPNVVTFNTLIK 256
Query: 88 --------------------------DCVCE-----LCRQKDPFLLHSEAEKVLVEMDYR 116
D CE LC++ S+ +L+E R
Sbjct: 257 GLFRECRVDEGIGMVYEMIELGCQLSDVTCEILVDGLCKEGRV----SQVCDLLMEFSKR 312
Query: 117 GV-PRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEE 175
GV P+ + F VL+ LC + AL++ + + GC P+ + +V+I L ++EE
Sbjct: 313 GVLPKGYDYF-VLVEILCGKGEAFKALEVIYELWSKGCVPSLISCIVMIDGLRGLGKIEE 371
Query: 176 GDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLL 235
++++M G LD + L LC R E A ++ + + G EP TY +L
Sbjct: 372 AMRLVEKMLKEE-GMVLDVVTFNSVLQDLCDAGRTEDANRLRLLASSKGLEPDAMTYKIL 430
Query: 236 MSKLGAHNRVDKANALFHEAQSRGL 260
++ + + +E +G
Sbjct: 431 VAGYRGEGNQSEGELVVNEMLDKGF 455
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 43 PDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLL 102
P ++C++LI G+ G+ + A +M + + V +N ++ C +
Sbjct: 176 PSVSVCNILIHGFVKSGRFDRAFEFYNQMVKDRIKPDVFTFNILISGYCRDFK------- 228
Query: 103 HSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVV 162
A ++ EM G NV TFN LI L + + ++ + + + M E GC ++ T +
Sbjct: 229 FGFALEMFDEMRKMGCHPNVVTFNTLIKGLFRECRVDEGIGMVYEMIELGCQLSDVTCEI 288
Query: 163 LIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKA 222
L+ L + R+ + +++ M+ + G Y+ + ILCG AL+V + +
Sbjct: 289 LVDGLCKEGRVSQVCDLL--MEFSKRGVLPKGYDYFVLVEILCGKGEAFKALEVIYELWS 346
Query: 223 DGCEPGIKTYDLLMSKLGAHNRVDKA 248
GC P + + +++ L ++++A
Sbjct: 347 KGCVPSLISCIVMIDGLRGLGKIEEA 372
>Medtr4g079260.1 | PPR containing plant-like protein | LC |
chr4:30600131-30604187 | 20130731
Length = 476
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 17 VVEKLCSKGFASYAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGF 76
+ +CSKGF +P+ C+ LI +C G L A + M G
Sbjct: 320 IFNLMCSKGF---------------YPEVVSCNYLINSFCKSGYLSSAWSMFHHMQNRGL 364
Query: 77 ELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMD--------YRGVPRNVETFNVL 128
+ +V YN + + ++ + + L E+ + D Y+ V N +N +
Sbjct: 365 QPDIVTYNYLCCALLQMNKVDEVMKLLPTMEEHKINADNFTNSIIFYKCVTFNFVVYNSM 424
Query: 129 ITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMI 180
I C + DALKLF +M E GC P+ T+ I SL+ E+ ++++
Sbjct: 425 INGFCLRKLINDALKLFPKMKENGCNPDAVTYKTTIHSLFNNNEDEKAEKLM 476
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 20/214 (9%)
Query: 51 LIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVL 110
LI G+ V ++E+A+ L M++ G YN M++ E K L ++ +
Sbjct: 269 LINGYSVRNQVEKAQDLFDNMFKRGVPYDTRCYNMMINNFYE---NK----LFAKVIDIF 321
Query: 111 VEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQA 170
M +G V + N LI + CK A +FH M G P+ T+ L +L Q
Sbjct: 322 NLMCSKGFYPEVVSCNYLINSFCKSGYLSSAWSMFHHMQNRGLQPDIVTYNYLCCALLQM 381
Query: 171 ARLEEGDEMIDRMKSAGFGA-------------SLDKKAYYQFLTILCGIERVEHALKVF 217
+++E +++ M+ A + + Y + C + + ALK+F
Sbjct: 382 NKVDEVMKLLPTMEEHKINADNFTNSIIFYKCVTFNFVVYNSMINGFCLRKLINDALKLF 441
Query: 218 AMMKADGCEPGIKTYDLLMSKLGAHNRVDKANAL 251
MK +GC P TY + L +N +KA L
Sbjct: 442 PKMKENGCNPDAVTYKTTIHSLFNNNEDEKAEKL 475
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 22/251 (8%)
Query: 12 GSLKVVVEKLCSKGFASYAER---MVKDLARVI--FPDEAMCDMLIKGWCVDGKLEEA-- 64
G+ +++ + G A R KD ++ + ++ ++LI C +G EA
Sbjct: 179 GTFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASE 238
Query: 65 ---RRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRN 121
RR ++ G+ + YN ML+ + K AE++ EM V +
Sbjct: 239 YLLRRKETDL---GWVPSIRVYNIMLNGWFRARKLK-------HAERLWEEMKNENVRPS 288
Query: 122 VETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEMID 181
V T+ L+ C++R+ E AL++ M + G PN + +I +L +A R +E M++
Sbjct: 289 VVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMME 348
Query: 182 RMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSKLGA 241
R G +L Y + C +E A K+ M + G P TY+
Sbjct: 349 RFHVLQIGPTLS--TYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSR 406
Query: 242 HNRVDKANALF 252
+VD+ L+
Sbjct: 407 CGKVDEGMNLY 417
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 33/255 (12%)
Query: 29 YAERMVKDLAR-VIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAML 87
+AER+ +++ + P L++G+C ++E+A + GEM + G + + YN ++
Sbjct: 272 HAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPII 331
Query: 88 DCVCELCRQKD--------------PFLLHSE--------------AEKVLVEMDYRGVP 119
D + E R K+ P L A K+L +M RG
Sbjct: 332 DALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFL 391
Query: 120 RNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAARLEEGDEM 179
T+N + K ++ + L+ +M E G P+ T+ ++++ L + +LE ++
Sbjct: 392 PIPTTYNYFFRYFSRCGKVDEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQV 451
Query: 180 IDRMKSAGFGASLDKKAYYQFLT-ILCGIERVEHALKVFAMMKADGCEPGIKTYDLLMSK 238
M+ G+ L A LT +LC + ++E A F M G P T+ L +
Sbjct: 452 SMEMRHKGYDMDL---ATSTMLTHLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVE 508
Query: 239 LGAHNRVDKANALFH 253
L + A L H
Sbjct: 509 LKKQGMNEMARKLCH 523
>Medtr6g080110.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30119546-30118699 | 20130731
Length = 261
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 6 GLKRDRGSLKVVVEKLCSKGFASYAERMVKDLARVIF-PDEAMCDMLIKGWCVDGKLEEA 64
G+K D + +++ C G +A ++ + + + PD LIKG C+ G + +A
Sbjct: 96 GIKLDLVNCSILINSFCQLGHNPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKGDIHQA 155
Query: 65 RRLAGEMYRGGFELGVVAYNAMLDCVC---------ELCRQKDPFLLH--SEAEKVLVEM 113
++ GF L V Y +++ +C EL R+ D L+ EA + EM
Sbjct: 156 LHFHDKVIAMGFHLDKVGYGTLINGLCKVGETKAALELLRRVDGKLIKKVDEAINLFEEM 215
Query: 114 DYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETT 159
R + +V T+N LI LCK K ALKL M + G P+ T
Sbjct: 216 HCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGQPPDIIT 261
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 112 EMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAA 171
+M++ G+ ++ ++LI + C++ A + ++ + G P+ TF LI+ L
Sbjct: 91 KMEFEGIKLDLVNCSILINSFCQLGHNPFAFSVLAKILKNGYEPDTITFTTLIKGLCLKG 150
Query: 172 RLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCG------------------IERVEHA 213
+ + D++ + GF LDK Y + LC I++V+ A
Sbjct: 151 DIHQALHFHDKVIAMGF--HLDKVGYGTLINGLCKVGETKAALELLRRVDGKLIKKVDEA 208
Query: 214 LKVFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRG 259
+ +F M P + TY+ L+ L ++ A L E RG
Sbjct: 209 INLFEEMHCRKLIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRG 254
>Medtr6g079260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29889526-29890146 | 20130731
Length = 188
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 41 IFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPF 100
I P+ + LI G G + +L +M+ G +V YN++LD +C+ +
Sbjct: 40 IIPNVVTYNSLIDGLSKSGIISYVLQLVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTI 99
Query: 101 LLHS----------EAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGE 150
L + +A + ++ +G V T+ V+I C +++L L +M E
Sbjct: 100 ALSTKFKDQSGRLKDARNIFEDLLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEE 159
Query: 151 WGCYPNETTFVVLIRSLYQAARLEEGDEMIDR 182
GC N T+ ++IRSL+ DEMI R
Sbjct: 160 NGCISNAVTYEIIIRSLF------ANDEMITR 185
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 90/197 (45%), Gaps = 27/197 (13%)
Query: 49 DMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLDCVCELCRQKDPFLLHSEAEK 108
+ +I G+C K++EA L EM+ VV YN+++D + K + S +
Sbjct: 13 NTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGL-----SKSGII--SYVLQ 65
Query: 109 VLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLY 168
++ +M RGVP N+ T+N ++ LCK + + + L + +
Sbjct: 66 LVDQMHDRGVPPNIVTYNSILDALCKTHQVDKTIALSTKFKD------------------ 107
Query: 169 QAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHALKVFAMMKADGCEPG 228
Q+ RL++ + + + G+ +++ Y + C + +L + + M+ +GC
Sbjct: 108 QSGRLKDARNIFEDLLVKGYNVTVN--TYTVMIQGFCSHGLFDESLALLSKMEENGCISN 165
Query: 229 IKTYDLLMSKLGAHNRV 245
TY++++ L A++ +
Sbjct: 166 AVTYEIIIRSLFANDEM 182
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 20/177 (11%)
Query: 113 MDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRMGEWGCYPNETTFVVLIRSLYQAAR 172
M +GV NV ++N +I CKI+K ++A+ LF M PN T+ LI L ++
Sbjct: 1 MASKGVT-NVPSYNTMINGFCKIKKVDEAMNLFKEMHCKNIIPNVVTYNSLIDGLSKSGI 59
Query: 173 LEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIERVEHAL-----------------K 215
+ +++D+M G ++ Y L LC +V+ +
Sbjct: 60 ISYVLQLVDQMHDRGVPPNI--VTYNSILDALCKTHQVDKTIALSTKFKDQSGRLKDARN 117
Query: 216 VFAMMKADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGLAVTPKEYAVDPR 272
+F + G + TY +++ +H D++ AL + + G Y + R
Sbjct: 118 IFEDLLVKGYNVTVNTYTVMIQGFCSHGLFDESLALLSKMEENGCISNAVTYEIIIR 174
>Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:40679471-40676723 | 20130731
Length = 715
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 13/233 (5%)
Query: 29 YAERMVKDLARVIFPDEAMCDMLIKGWCVDGKLEEARRLAGEMYRGGFELGVVAYNAMLD 88
+ ERM K + PDE ++ + GK+EE L G++ + ++ +
Sbjct: 247 WFERMYKT---GLMPDEVTFSAILDVYARLGKVEEVVNLFERGRATGWKPDPITFSVLGK 303
Query: 89 CVCELCRQKDPFLLHSEAEKVLVEMDYRGVPRNVETFNVLITNLCKIRKTEDALKLFHRM 148
E + VL EM GV N+ +N L+ + K K A LF M
Sbjct: 304 MFGEAGD-------YDGIRYVLQEMKSLGVQPNLVVYNTLLEAMGKAGKPGFARSLFEEM 356
Query: 149 GEWGCYPNETTFVVLIRSLYQAARLEEGDEMIDRMKSAGFGASLDKKAYYQFLTILCGIE 208
+ G PNE T +I+ +A ++ E+ RMK G+ +D Y L + +
Sbjct: 357 IDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRMKENGW--PMDFILYNTLLNMCADVG 414
Query: 209 RVEHALKVFAMMK-ADGCEPGIKTYDLLMSKLGAHNRVDKANALFHEAQSRGL 260
+E A +F MK ++ C+P +Y +++ G+ VDKA LF E G+
Sbjct: 415 LIEEAETLFRDMKQSEHCKPDSWSYTAMLNIYGSEGAVDKAMKLFEEMSKFGI 467