Miyakogusa Predicted Gene

Lj2g3v0635710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0635710.1 Non Characterized Hit- tr|B9RFL4|B9RFL4_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,32.89,0.00000000000003,Agenet,Agenet-like domain; Tudor-like domain
present in plant sequences,Tudor-like, plant,CUFF.35056.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g084210.1 | agenet domain protein | HC | chr1:37618390-376...    86   2e-17
Medtr2g033390.1 | plant tudor-like protein | LC | chr2:12683183-...    71   5e-13
Medtr3g065560.1 | agenet domain protein | LC | chr3:29626838-296...    65   4e-11
Medtr5g089140.1 | agenet domain protein | HC | chr5:38743787-387...    60   2e-09
Medtr5g089250.1 | agenet domain protein | HC | chr5:38788620-387...    59   2e-09
Medtr4g079980.1 | agenet domain protein | LC | chr4:30963203-309...    59   3e-09
Medtr5g089220.1 | agenet domain protein | HC | chr5:38782448-387...    57   1e-08
Medtr4g079830.1 | agenet domain protein | HC | chr4:30897081-308...    57   1e-08

>Medtr1g084210.1 | agenet domain protein | HC |
           chr1:37618390-37617540 | 20130731
          Length = 199

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 81/149 (54%), Gaps = 15/149 (10%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           F +G LVEV S  KG +G WFL  +VELK   +F+VE++  + D   K L+E+++  HIR
Sbjct: 56  FVVGALVEVCSDEKGLKGAWFLGTIVELKRHFRFVVEYEALIDD-DSKPLREELNIRHIR 114

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLEGD 162
           P PP               D  A++K  D VDA + +GW V ++ KV G++ Y V+    
Sbjct: 115 PRPPKT-------------DDVAEFKFFDEVDAFHNDGWWVGIVTKVVGDSKYVVFFRSF 161

Query: 163 PQPLDGLTPSQLRRHYDRAGCDWDVASQV 191
            + ++    SQLR H D     W +AS++
Sbjct: 162 KEEME-FHHSQLRLHQDWMDRRWVMASKL 189


>Medtr2g033390.1 | plant tudor-like protein | LC |
           chr2:12683183-12686425 | 20130731
          Length = 471

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 16/149 (10%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTG-KLLKEKIDDDHI 101
           FR G++VEVSS  +GY+G WF+A +++     KFLVEH+  L +  G ++LKE+I+   I
Sbjct: 67  FRKGEIVEVSSDEEGYQGAWFVATIIDTLGNEKFLVEHRDLLMNDGGIEVLKEEIETKFI 126

Query: 102 RPLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKVHGNNTYDVWLEG 161
           RP PP+                   +K L  VDA Y +GW   M+  V   N+ + ++  
Sbjct: 127 RPCPPHVPMF-------------GSFKRLQEVDAWYNDGWWEGMV--VELVNSEECYVRF 171

Query: 162 DPQPLDGLTPSQLRRHYDRAGCDWDVASQ 190
               +     S+LR H D     W ++S+
Sbjct: 172 RNNEVLKFESSKLRPHQDWIDGKWIMSSK 200



 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 14/114 (12%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           F  G  VEV S  +GY G+W+ A VV+L   GK+LVE+     D   + LKE +D   IR
Sbjct: 255 FYKGTNVEVKSDEQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQQLKEVVDVSDIR 314

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRKV-HGNNTY 155
           P PP+              D   +Y   + VDA Y +GW   ++  V HG N +
Sbjct: 315 PRPPDI-------------DHFCRYVRQEWVDAWYNDGWWEGVVSNVGHGLNGF 355


>Medtr3g065560.1 | agenet domain protein | LC |
           chr3:29626838-29627278 | 20130731
          Length = 146

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 16/150 (10%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           +R+GDLVEV  K +G+ G++F A++V     G+++V +K+ L +     L+E +    +R
Sbjct: 10  YRVGDLVEVCIKDEGFWGSYFEAKIVACLENGEYVVRYKNLLENDESGPLEETLLSKDLR 69

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMI--RKVHGNNTYDVWLE 160
           P+PP+  N            P+A ++L  +VD    +GW +  I  +KV   N Y +W+ 
Sbjct: 70  PIPPSVQN------------PSA-FQLNQKVDVFCNDGWWLGKITSKKVFRRNHYYIWVY 116

Query: 161 GDPQPLDGLTPS-QLRRHYDRAGCDWDVAS 189
                +  L    Q+R H++ +G DW   S
Sbjct: 117 FPTISIRRLCRCDQIRVHHELSGGDWITRS 146


>Medtr5g089140.1 | agenet domain protein | HC |
           chr5:38743787-38743347 | 20130731
          Length = 146

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 10/100 (10%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           +++GD VEV SK +G+ G++F A +V     GK+++ +K+ L D   +LL E +    +R
Sbjct: 10  YKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKDLR 69

Query: 103 PLPPNALNTHR----------DFDAWKVGDPNAKYKLLDR 132
           PLPP   N  R          D D W VG   ++  L+++
Sbjct: 70  PLPPRVRNPSRFELNQKVDVFDNDGWWVGKIASEKILMEK 109


>Medtr5g089250.1 | agenet domain protein | HC |
           chr5:38788620-38789060 | 20130731
          Length = 146

 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 10/100 (10%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           +++GD VEV SK +G+ G++F A +V     GK+++ +K+ L D   +LL E +    +R
Sbjct: 10  YKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKDLR 69

Query: 103 PLPPNALNTHR----------DFDAWKVGDPNAKYKLLDR 132
           PLPP   N  R          D D W VG+  ++  L+++
Sbjct: 70  PLPPRVHNPWRFELNQKVDVFDNDGWWVGEIASEKILMEK 109


>Medtr4g079980.1 | agenet domain protein | LC |
           chr4:30963203-30962742 | 20130731
          Length = 153

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 17/128 (13%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           +++GD VEV SK +G+ G++F A +V     GK+++ +K+ L D   +LL E +    +R
Sbjct: 10  YKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESQLLMETLLSKDLR 69

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMIRK----VHGNNTYDVW 158
           P  P   N              +K++L  +VD  Y +GW V  I      +  N  Y V+
Sbjct: 70  PSQPRVRNP-------------SKFQLNQKVDVFYKDGWWVGKIASEKILMENNYYYSVY 116

Query: 159 LEGDPQPL 166
            +   Q +
Sbjct: 117 FDYTHQTI 124


>Medtr5g089220.1 | agenet domain protein | HC |
           chr5:38782448-38782888 | 20130731
          Length = 146

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 13/104 (12%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           +++GD VEV S+ +G+ G++F A +V     GK+++ +K+ L D   +LL E +    +R
Sbjct: 10  YKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKDLR 69

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMI 146
           P+PP+  N               K+KL  +VD    +GW V  I
Sbjct: 70  PIPPHVRNP-------------LKFKLNQKVDVFDNDGWWVGKI 100


>Medtr4g079830.1 | agenet domain protein | HC |
           chr4:30897081-30897843 | 20130731
          Length = 147

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 13/104 (12%)

Query: 43  FRIGDLVEVSSKVKGYRGTWFLAEVVELKVQGKFLVEHKHRLHDVTGKLLKEKIDDDHIR 102
           ++IGD VEV SK +G+ G+++ A VV     G+++V++K+ L +     L E I    +R
Sbjct: 10  YKIGDKVEVCSKEEGFFGSYYKARVVSRLQNGQYMVQYKNLLLEDKSGPLVETIYPYELR 69

Query: 103 PLPPNALNTHRDFDAWKVGDPNAKYKLLDRVDAQYLEGWSVAMI 146
           P PP   N H             +++L  +VDA + +GW V  I
Sbjct: 70  PTPPRVRNPH-------------EFQLNQKVDAFHNDGWWVGQI 100