Miyakogusa Predicted Gene
- Lj2g3v0635520.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0635520.1 Non Characterized Hit- tr|I1K588|I1K588_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.76,6e-18,seg,NULL;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; ZINC_FINGER_C2H2_1,Zinc finger,
C2H2; ZF_PHD_1,Zinc ,CUFF.35038.1
(423 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |... 239 3e-63
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289... 233 2e-61
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1... 233 4e-61
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158... 230 2e-60
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1... 229 4e-60
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ... 226 2e-59
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003... 226 3e-59
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1... 221 9e-58
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |... 216 3e-56
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289... 201 2e-51
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1... 194 1e-49
Medtr2g017720.1 | F-box associated protein | LC | chr2:5437660-5... 148 1e-35
Medtr3g102000.1 | hypothetical protein | LC | chr3:46988766-4698... 110 3e-24
Medtr5g030560.1 | C2H2-like zinc finger protein, putative | HC |... 71 2e-12
Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193... 64 4e-10
Medtr4g103250.1 | nucleic acid-binding protein, putative | HC | ... 55 2e-07
>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
chr8:5790010-5786899 | 20130731
Length = 517
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 102/156 (65%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
K+KR G PDPDAEV+++SPK+LL +R++CEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 62 KKKRNLPGNPDPDAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQ 121
Query: 91 RETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQS 150
R + +RK+V+VCPEPTC+HHDP ALGDL GIKKHF RKH K+W CE+CSK YAVQS
Sbjct: 122 RTSKEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFSRKHG-EKKWKCEKCSKKYAVQS 180
Query: 151 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN 186
D+KAH KTCGTR + CDCG +FSR +SFI H+ C+
Sbjct: 181 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 216
>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 468
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
K++R G PDP AEV++LSPKTL+ ++R++CEICN+GFQRDQNLQ+H+R H +PWKL +
Sbjct: 46 KKRRNLPGNPDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQ 105
Query: 91 RETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQS 150
R + +RK+V+VCPEPTC+HHDP ALGDL GIKKHF RKH K+W C++CSK YAVQS
Sbjct: 106 RTSNEIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHG-EKKWKCDKCSKKYAVQS 164
Query: 151 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN 186
D+KAH KTCGTR + CDCG +FSR +SFI H+ C+
Sbjct: 165 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 200
>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
chr1:42286106-42289867 | 20130731
Length = 539
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 127/156 (81%), Gaps = 1/156 (0%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
K++R GTP+PDAEV++LSPKTL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL +
Sbjct: 47 KKRRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 106
Query: 91 RETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQS 150
+ R++V++CPEPTC+HHDP ALGDL GIKKHF RKH K+W CE+CSK YAVQS
Sbjct: 107 KSNKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHFSRKHGE-KKWKCEKCSKKYAVQS 165
Query: 151 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN 186
D+KAH KTCGTR + CDCG +FSR +SFI H+ C+
Sbjct: 166 DWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 201
>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
chr1:4158857-4161721 | 20130731
Length = 452
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 100/158 (63%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
KRKR G PDP+A+V++LSP+TLL ++R++CEICN+GFQRDQNLQ+H+R H +PWKL K
Sbjct: 41 KRKRNLPGHPDPEAQVLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKK 100
Query: 91 RET-PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 149
R ++RK+V+VCPEPTC+HHDP ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 101 RNVNEIIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFFRKHGE-KKWKCEKCSKRYAVQ 159
Query: 150 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNM 187
SD+KAH K CGT+ + CDCG +FSR +SFI H+ C++
Sbjct: 160 SDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDV 197
>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
chr1:50790900-50782752 | 20130731
Length = 571
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 125/153 (81%), Gaps = 1/153 (0%)
Query: 34 RRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRET 93
R GTP+PDAEV++LSPKTL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL ++ T
Sbjct: 47 RNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTT 106
Query: 94 PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYK 153
+++V++CPEPTC+HHDP ALGDL GIKKH+ RKH K+W C++CSK YAVQSD+K
Sbjct: 107 KEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHG-EKKWKCDKCSKKYAVQSDWK 165
Query: 154 AHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN 186
AH KTCGTR + CDCG +FSR +SFI H+ C+
Sbjct: 166 AHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 198
>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
| chr4:22086566-22083892 | 20130731
Length = 495
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 126/157 (80%), Gaps = 2/157 (1%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
K+KR GTPDP++EVV++SPK+L+ ++R++CEICN+GFQRDQNLQ+HRR H +PWKL +
Sbjct: 38 KKKRNLPGTPDPESEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 97
Query: 91 RET-PVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 149
R +RK+V+VCPE TC+HH+P ALGDL GIKKH+ RKH K+W CE+CSK YAVQ
Sbjct: 98 RANKDQIRKKVYVCPEKTCVHHEPSRALGDLTGIKKHYSRKHG-EKKWKCEKCSKKYAVQ 156
Query: 150 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN 186
SD+KAH K CGTR + CDCG +FSR +SFI H+ C+
Sbjct: 157 SDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAFCD 193
>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
chr2:40039886-40042385 | 20130731
Length = 414
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 97/156 (62%), Positives = 127/156 (81%), Gaps = 2/156 (1%)
Query: 31 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 90
KRKR GTPDPD+EV++LSPK+L+ S+R++CE+CN+GF+RDQNLQ+HRR H +PWKL +
Sbjct: 32 KRKRSLPGTPDPDSEVIALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 91
Query: 91 R-ETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 149
R + V+RK+V+VCPE +C+HHDP ALGDL GIKKHF RKH K+W C++CSK YAVQ
Sbjct: 92 RNKLEVIRKKVYVCPEKSCVHHDPSRALGDLTGIKKHFSRKHG-EKKWKCDKCSKKYAVQ 150
Query: 150 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC 185
SD+KAH K CGT+ + CDCG +FSR +SF+ H+ C
Sbjct: 151 SDWKAHSKICGTKEYRCDCGTLFSRKDSFLTHRAFC 186
>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
chr1:50789869-50782797 | 20130731
Length = 582
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 120/145 (82%), Gaps = 1/145 (0%)
Query: 42 PDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVF 101
PDAEV++LSPKTL+ ++R++CE+CN+GFQR+QNLQ+HRR H +PWKL ++ T +++V+
Sbjct: 66 PDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVY 125
Query: 102 VCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGT 161
+CPEPTC+HHDP ALGDL GIKKH+ RKH K+W C++CSK YAVQSD+KAH KTCGT
Sbjct: 126 LCPEPTCVHHDPSRALGDLTGIKKHYSRKHG-EKKWKCDKCSKKYAVQSDWKAHSKTCGT 184
Query: 162 RGHSCDCGRVFSRVESFIEHQDACN 186
R + CDCG +FSR +SFI H+ C+
Sbjct: 185 REYRCDCGTLFSRRDSFITHRAFCD 209
>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
chr2:38896799-38894235 | 20130731
Length = 429
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 94/148 (63%), Positives = 119/148 (80%), Gaps = 1/148 (0%)
Query: 39 TPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRK 98
T +P+AEV+SLSPKTL+ ++R+VCEIC + FQRDQNLQ+HRR H +PWKL +R + +RK
Sbjct: 15 TTNPEAEVISLSPKTLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLKQRTSKEIRK 74
Query: 99 RVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKT 158
RV+VCPE TC+H+ P ALGDL GIKKHF RKH K+W CE+CSK YAVQSD+KAH KT
Sbjct: 75 RVYVCPEKTCVHNHPSRALGDLTGIKKHFCRKHG-EKKWKCEKCSKFYAVQSDWKAHSKT 133
Query: 159 CGTRGHSCDCGRVFSRVESFIEHQDACN 186
CGTR + CDCG +FSR +SF+ H+ C+
Sbjct: 134 CGTREYKCDCGTIFSRRDSFVTHRAFCD 161
>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
chr2:42897047-42899888 | 20130731
Length = 399
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 84/132 (63%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 55 LESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPC 114
+ ++R++CEICN+GFQRDQNLQ+H+R H +PWKL +R + +RK+V+VCPEPTC+HHDP
Sbjct: 1 MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTSNEIRKKVYVCPEPTCVHHDPS 60
Query: 115 HALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 174
ALGDL GIKKHF RKH K+W C++CSK YAVQSD+KAH KTCGTR + CDCG +FSR
Sbjct: 61 RALGDLTGIKKHFCRKHG-EKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSR 119
Query: 175 VESFIEHQDACN 186
+SFI H+ C+
Sbjct: 120 RDSFITHRAFCD 131
>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
chr1:42286195-42289752 | 20130731
Length = 522
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
Query: 59 RYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALG 118
+++CE+CN+GFQR+QNLQ+HRR H +PWKL ++ R++V++CPEPTC+HHDP ALG
Sbjct: 58 KFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEPRRKVYLCPEPTCVHHDPSRALG 117
Query: 119 DLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESF 178
DL GIKKHF RKH K+W CE+CSK YAVQSD+KAH KTCGTR + CDCG +FSR +SF
Sbjct: 118 DLTGIKKHFSRKHGE-KKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSF 176
Query: 179 IEHQDACN 186
I H+ C+
Sbjct: 177 ITHRAFCD 184
>Medtr2g017720.1 | F-box associated protein | LC |
chr2:5437660-5435484 | 20130731
Length = 432
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 6/115 (5%)
Query: 41 DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRV 100
DP+AEV+SLSPK L+ ++R+VCEIC + FQRDQNLQ+HRR H +PWKL +R + +RKRV
Sbjct: 323 DPEAEVISLSPKPLMATNRFVCEICLKDFQRDQNLQLHRRGHNLPWKLKQRTSKKIRKRV 382
Query: 101 FVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAH 155
+VCPE +H+ P ALGDL GIKKHF RKH ++CSK Y VQSD+KAH
Sbjct: 383 YVCPEKIRVHNHPSRALGDLTGIKKHFCRKHGE------KKCSKFYVVQSDWKAH 431
>Medtr3g102000.1 | hypothetical protein | LC |
chr3:46988766-46986877 | 20130731
Length = 226
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 83/134 (61%), Gaps = 11/134 (8%)
Query: 27 TAINKRKRRPAGTPDPDAEVVSLSPKTLLE---SDRYVCEICNQG----FQRDQNLQMHR 79
+ +K K +P D + + KT L +RYV ++ FQR+QNLQ+HR
Sbjct: 2 SYFSKNKTKPYSQIDKNVMLQLTLHKTWLSFNLYNRYVIKLYAHAHPEDFQRNQNLQLHR 61
Query: 80 RRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVC 139
R + +PWKL +R + +RKRV+VCPE T +H+ P ALGDL GIKKHF R HS +K W
Sbjct: 62 RGYNLPWKLKQRTSKEIRKRVYVCPEKTRVHNHPSRALGDLTGIKKHFCRNHSENK-W-- 118
Query: 140 ERCSKGYAVQSDYK 153
+CSK YAVQSD+K
Sbjct: 119 -KCSKFYAVQSDWK 131
>Medtr5g030560.1 | C2H2-like zinc finger protein, putative | HC |
chr5:12937715-12939520 | 20130731
Length = 81
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/45 (64%), Positives = 39/45 (86%)
Query: 41 DPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVP 85
DP+AEV+SLSPK L+ ++R+VCEIC + FQRDQNLQ+HRR + +P
Sbjct: 16 DPEAEVISLSPKPLMATNRFVCEICLKDFQRDQNLQLHRRGYNLP 60
>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
chr1:41939075-41940250 | 20130731
Length = 294
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 35 RPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWK----LLK 90
+P+ TP + + L+ ++ C +CN+ F R N+QMH H ++ LK
Sbjct: 90 KPSHTPIIPQYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLK 149
Query: 91 RETPVVRKRVFVCPEPTC-------LHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCS 143
P + P C +++ L D ++ H++RKH K + C +C
Sbjct: 150 GPKPASSSSMLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGG-KSFECRKCR 208
Query: 144 KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMG 188
K +AV+ D++ H K CG + C CG F S +H A G
Sbjct: 209 KTFAVRGDWRTHEKNCG-KLWFCICGSDFKHKRSLKDHVRAFGNG 252
>Medtr4g103250.1 | nucleic acid-binding protein, putative | HC |
chr4:42670067-42669332 | 20130731
Length = 144
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 48/67 (71%)
Query: 357 NIQEQARENLRIAMAEKAYAEEARKQAKRQIEIAEQEFTNAKRIRQQAQAELDKAYNLKE 416
++ +A E +R+A EKAYAE R+ +R++E+A+ EF A+++ ++A+ E+++A +KE
Sbjct: 58 TLKWEAAEQIRLAAMEKAYAERVRELTRREMEMAQSEFARARQMWERAREEVERAERIKE 117
Query: 417 HAMKQVN 423
A +QV+
Sbjct: 118 RATRQVD 124