Miyakogusa Predicted Gene

Lj2g3v0635080.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0635080.1 Non Characterized Hit- tr|I1MPB8|I1MPB8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,63.27,0.00000001,
,CUFF.34997.1
         (51 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g064005.1 | hypothetical protein | HC | chr1:28145784-2814...    70   5e-13
Medtr7g015680.1 | hypothetical protein | LC | chr7:4866271-48658...    55   2e-08

>Medtr1g064005.1 | hypothetical protein | HC |
          chr1:28145784-28146257 | 20130731
          Length = 157

 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 42/51 (82%)

Query: 1  MTNNAEALTNITQNSGNLKIQVANGNHLPITVIGDISTSLTDVYVSPGLTS 51
          MT+NA+ L+NI +  GNLKI  A+GN LPIT  GDIS+SLT+V+VSPGLTS
Sbjct: 40 MTSNAQFLSNIKKYFGNLKIHTADGNQLPITATGDISSSLTNVFVSPGLTS 90


>Medtr7g015680.1 | hypothetical protein | LC |
          chr7:4866271-4865858 | 20130731
          Length = 137

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 35/51 (68%)

Query: 1  MTNNAEALTNITQNSGNLKIQVANGNHLPITVIGDISTSLTDVYVSPGLTS 51
          MT ++E L N+    GN KIQ+A+GN L IT +GDI++   DV VSPGL S
Sbjct: 36 MTGSSEYLHNLHSYDGNQKIQIADGNTLSITTLGDINSGFRDVLVSPGLAS 86