Miyakogusa Predicted Gene

Lj2g3v0633870.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0633870.2 Non Characterized Hit- tr|G7JP36|G7JP36_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,82.12,0,NRDE-2,siRNA-mediated silencing protein NRDE-2; HAT
(Half-A-TPR) repeats,RNA-processing protein, HAT,CUFF.34985.2
         (591 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g016590.1 | UPF0614 C14orf102-like protein | HC | chr4:507...   982   0.0  
Medtr6g072590.1 | disease resistance protein (TIR-NBS-LRR class)...   128   2e-29
Medtr6g074610.1 | hypothetical protein | LC | chr6:27589560-2758...   125   2e-28
Medtr6g075030.1 | UPF0614 C14orf102-like protein | HC | chr6:277...   101   2e-21
Medtr6g072640.1 | UPF0614 C14orf102-like protein, putative | HC ...    88   2e-17
Medtr6g072310.1 | disease resistance protein (TIR-NBS-LRR class)...    82   1e-15
Medtr6g074780.1 | disease resistance protein (TIR-NBS-LRR class)...    70   5e-12
Medtr6g074160.1 | hypothetical protein | HC | chr6:27423848-2742...    67   4e-11
Medtr6g478020.1 | disease resistance protein (TIR-NBS-LRR class)...    61   4e-09
Medtr6g472240.1 | hypothetical protein | HC | chr6:26059889-2606...    60   7e-09

>Medtr4g016590.1 | UPF0614 C14orf102-like protein | HC |
            chr4:5074660-5083977 | 20130731
          Length = 1158

 Score =  982 bits (2538), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/593 (80%), Positives = 521/593 (87%), Gaps = 2/593 (0%)

Query: 1    MEDNQDEDEGKDVEPEVDTENLLNLLGIDVNSGDGGEVTEASTWIKWSAEESSRDCDQWM 60
            MEDNQDEDE KDVEPE DTENLL LLGID+N+GDGGEV +  TWIKWS EESSRDCDQWM
Sbjct: 566  MEDNQDEDEYKDVEPEDDTENLLKLLGIDINAGDGGEVNDTLTWIKWSEEESSRDCDQWM 625

Query: 61   PVRXXXXXXXXXXXX-XXXXXXQLLRIILYEDVTEYLFTLSTEEARLSLVSQFIDFYGGK 119
            P+R                   QL RIILYEDV+EYLFTL+T+EARL LVSQFIDFYGGK
Sbjct: 626  PIRRKLDTTTSTSEALETEEDEQLSRIILYEDVSEYLFTLNTKEARLYLVSQFIDFYGGK 685

Query: 120  MSHLFCSNSPSWTENVLSMEDLPDSMLEKLKCIHEVLTKTKNSPAGFNFEFPSGSLSSNA 179
             S LF +NSP+WTEN LS+EDLPDSMLEKLKCIH VLTK ++ P  F  +F  GS   NA
Sbjct: 686  TSQLFSTNSPTWTENTLSLEDLPDSMLEKLKCIHNVLTKAQSIPTSFTLDFLLGSSMRNA 745

Query: 180  DIMKFVRNAVLLCLTVFPRNHILEEAVLISEELYVTKMNSSNCMATPCRALAKSLLKSDR 239
            D+MKFVRNAVLLCLTVFPRNH+LEEAVLI EEL+VTKMNSSN   TPCRALAKSLLKSDR
Sbjct: 746  DMMKFVRNAVLLCLTVFPRNHVLEEAVLICEELFVTKMNSSNRGVTPCRALAKSLLKSDR 805

Query: 240  QDVLLCGVYAQREANYGNIDLARKVFDMALLSVEGLPVE-LQSSAPLLYFWYAEMELENN 298
            QDVLLCGVYA+REA+YGNIDLARKVFDMALLSVEGLP E +QS+APLL+ WYAE+EL NN
Sbjct: 806  QDVLLCGVYARREADYGNIDLARKVFDMALLSVEGLPPEEIQSNAPLLHLWYAEVELANN 865

Query: 299  SGGDREPSYRAIHVLSCLGNGTKYNPFKSQASSLQVLRAHQGFKERLRTVRSSWVRGMIN 358
            + G RE SYRAIH+LSCLGNGTKY PFKSQASSLQ+LRA QGFKE+LRTV SSW RG+IN
Sbjct: 866  TNGGRESSYRAIHILSCLGNGTKYTPFKSQASSLQLLRARQGFKEKLRTVLSSWFRGIIN 925

Query: 359  DHSVALVCSAALFEELTTGWEAGIEVLDQAFAAVLPERRSISYQLEFLFNYYIRILRRHQ 418
            D SVALVCSA+LFEELT+G +AGIEVLDQAF  VLPERRS SYQLEFLFNYYIR+L+RHQ
Sbjct: 926  DQSVALVCSASLFEELTSGCDAGIEVLDQAFTMVLPERRSHSYQLEFLFNYYIRMLQRHQ 985

Query: 419  RQSSLLKVWESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWL 478
            +QS L+KVWES+SQGLQ+YP+SPELLKGVVEVGHFHTTSN+LRRILD+ CYKKPSV+VWL
Sbjct: 986  KQSGLMKVWESVSQGLQLYPYSPELLKGVVEVGHFHTTSNKLRRILDERCYKKPSVVVWL 1045

Query: 479  FTLSYEMSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFRA 538
            F LSYEMSRGGS HRIRGLFERA+ ND LCSSVVLWRCY+ YELNIAHDPS+ARR+FFRA
Sbjct: 1046 FALSYEMSRGGSIHRIRGLFERAVSNDMLCSSVVLWRCYIGYELNIAHDPSAARRIFFRA 1105

Query: 539  IHACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQES 591
            IHACPWSKRLWLDGF +LNS+LTGKELSDLQEVMRDKELNLRTDIYEILLQES
Sbjct: 1106 IHACPWSKRLWLDGFLKLNSILTGKELSDLQEVMRDKELNLRTDIYEILLQES 1158


>Medtr6g072590.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr6:26884007-26890210 | 20130731
          Length = 1278

 Score =  128 bits (321), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 5/107 (4%)

Query: 392  VLPERRSISYQLEFLFNYYIRILRRHQRQSSLLKVWESISQGLQIYPFSPELLKGVVEVG 451
            V  E ++ ++Q+ + F +     RRHQ QS L KVWESIS+  Q+YPFS ELLKGVVE+G
Sbjct: 1177 VYSELKAWTWQIIYKFFH-----RRHQHQSGLKKVWESISEVFQMYPFSTELLKGVVEIG 1231

Query: 452  HFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRGGSHHRIRGLF 498
            HFHT SN+L R+ D+  Y+K SV++WLF LS+EMSRG SHHRIR LF
Sbjct: 1232 HFHTKSNKLHRVQDEWSYRKLSVVIWLFLLSWEMSRGCSHHRIRRLF 1278


>Medtr6g074610.1 | hypothetical protein | LC |
           chr6:27589560-27585855 | 20130731
          Length = 326

 Score =  125 bits (313), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/102 (58%), Positives = 74/102 (72%)

Query: 426 VWESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEM 485
           V+++    LQ+ PF PE LKGVVE G+FHT SN+L++IL +CCYKKPSV+VWL  LS+EM
Sbjct: 9   VFDTCDYILQLNPFGPEFLKGVVEFGNFHTMSNKLQQILKECCYKKPSVVVWLSALSFEM 68

Query: 486 SRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHD 527
            R GSHHRI GL+ER LGND L  SV+ W      ELN+  D
Sbjct: 69  CRDGSHHRIYGLYERVLGNDMLNISVLHWEVMWDKELNLTTD 110



 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 27/113 (23%)

Query: 478 LFTLSYEMSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFR 537
           LF LSYEMS GGS+HRI GLFE A+ ND LC+SVVLW CY+ YE+NIAHDP +A  + F 
Sbjct: 189 LFALSYEMSIGGSNHRICGLFEMAVSNDMLCNSVVLWHCYIGYEMNIAHDPYAAPHICFL 248

Query: 538 AIHACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQE 590
                  SK +WLDGF                       L+L+T+IYEILLQE
Sbjct: 249 RTR----SKLIWLDGF-----------------------LSLKTNIYEILLQE 274


>Medtr6g075030.1 | UPF0614 C14orf102-like protein | HC |
           chr6:27713376-27712479 | 20130731
          Length = 78

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 4/81 (4%)

Query: 485 MSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFRAIHACPW 544
           MS GGS+HRIRGLFE AL ND LC+SVVLW CY+ YELNIAHDP +AR + F        
Sbjct: 1   MSIGGSNHRIRGLFEMALSNDMLCNSVVLWHCYMGYELNIAHDPYAARHICFLRTR---- 56

Query: 545 SKRLWLDGFHQLNSVLTGKEL 565
           SK +WLDGF  L SVLTG  L
Sbjct: 57  SKLIWLDGFLSLKSVLTGSFL 77


>Medtr6g072640.1 | UPF0614 C14orf102-like protein, putative | HC |
           chr6:26909716-26910287 | 20130731
          Length = 83

 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 5/63 (7%)

Query: 520 YELNIAHDPSSARRVFFRAIHACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNL 579
           + LNIAHDPS++R +F RAIHACPWSKRL  D F     VLTGKELSDL +V RDKELN+
Sbjct: 3   WVLNIAHDPSASRCIFIRAIHACPWSKRLQWDKF-----VLTGKELSDLHKVTRDKELNM 57

Query: 580 RTD 582
           RT+
Sbjct: 58  RTE 60


>Medtr6g072310.1 | disease resistance protein (TIR-NBS-LRR class) | LC
            | chr6:26752279-26757982 | 20130731
          Length = 1196

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 7/76 (9%)

Query: 429  SISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRG 488
            +ISQG+Q++PFSPE      E+G FH    +L RIL++CCYKKPSV+  L  LS +MSR 
Sbjct: 1101 TISQGIQLHPFSPETCS---ELGKFH----KLGRILNECCYKKPSVVTCLCALSCDMSRD 1153

Query: 489  GSHHRIRGLFERALGN 504
             SHHRI  LFERA+ N
Sbjct: 1154 FSHHRICWLFERAVSN 1169


>Medtr6g074780.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr6:27665466-27660744 | 20130731
          Length = 1011

 Score = 70.5 bits (171), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/37 (83%), Positives = 34/37 (91%)

Query: 434  LQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYK 470
            L+IYPFSPELLKGVVEVGHF T SN+L RILD+CCYK
Sbjct: 975  LKIYPFSPELLKGVVEVGHFLTISNKLLRILDECCYK 1011


>Medtr6g074160.1 | hypothetical protein | HC |
           chr6:27423848-27422496 | 20130731
          Length = 120

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 35/41 (85%)

Query: 455 TTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRGGSHHRIR 495
           TTSN+LRRIL +CCYKKPSV++WLF LS +MSR  S HRIR
Sbjct: 78  TTSNKLRRILCECCYKKPSVVIWLFALSCDMSRDCSQHRIR 118


>Medtr6g478020.1 | disease resistance protein (TIR-NBS-LRR class) | LC
            | chr6:28783811-28790407 | 20130731
          Length = 1254

 Score = 60.8 bits (146), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 28/42 (66%), Positives = 35/42 (83%)

Query: 490  SHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSA 531
            SHHRI GLFE+AL  D L SSVVL+RCY+ +EL IA+DPS++
Sbjct: 1213 SHHRICGLFEKALDKDMLYSSVVLFRCYIRHELYIAYDPSAS 1254


>Medtr6g472240.1 | hypothetical protein | HC |
           chr6:26059889-26060912 | 20130731
          Length = 139

 Score = 60.1 bits (144), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 23/69 (33%)

Query: 428 ESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSR 487
           ESIS+GLQ+ PFSPE+L+GVV                      KP    +LF LSYEMSR
Sbjct: 39  ESISRGLQLQPFSPEILEGVV----------------------KPFATAFLFALSYEMSR 76

Query: 488 -GGSHHRIR 495
            GGSHH+IR
Sbjct: 77  GGGSHHKIR 85