Miyakogusa Predicted Gene
- Lj2g3v0633870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0633870.1 Non Characterized Hit- tr|I1MQN2|I1MQN2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,78.19,0,coiled-coil,NULL; no description,Protein
prenyltransferase; NRDE-2,siRNA-mediated silencing protein
,CUFF.34985.1
(1181 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g016590.1 | UPF0614 C14orf102-like protein | HC | chr4:507... 1756 0.0
Medtr6g072590.1 | disease resistance protein (TIR-NBS-LRR class)... 127 6e-29
Medtr6g074610.1 | hypothetical protein | LC | chr6:27589560-2758... 124 4e-28
Medtr6g075030.1 | UPF0614 C14orf102-like protein | HC | chr6:277... 105 2e-22
Medtr6g072640.1 | UPF0614 C14orf102-like protein, putative | HC ... 88 4e-17
Medtr6g072310.1 | disease resistance protein (TIR-NBS-LRR class)... 83 2e-15
Medtr6g074780.1 | disease resistance protein (TIR-NBS-LRR class)... 71 7e-12
Medtr6g074160.1 | hypothetical protein | HC | chr6:27423848-2742... 68 6e-11
Medtr6g478020.1 | disease resistance protein (TIR-NBS-LRR class)... 61 7e-09
Medtr6g472240.1 | hypothetical protein | HC | chr6:26059889-2606... 60 2e-08
Medtr6g074790.1 | hypothetical protein | HC | chr6:27669410-2766... 59 3e-08
>Medtr4g016590.1 | UPF0614 C14orf102-like protein | HC |
chr4:5074660-5083977 | 20130731
Length = 1158
Score = 1756 bits (4549), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 888/1162 (76%), Positives = 971/1162 (83%), Gaps = 27/1162 (2%)
Query: 22 KPSLFPVFPPXXXXXXXXXXXXXXXQWLGRPPTPRSILFXNSSFTADISAINDAVASQLS 81
KPSLFPVFP QWL NSSFT DIS IN+ VAS L+
Sbjct: 22 KPSLFPVFP--VTNSSLQITTSSLPQWLS-----------NSSFTTDISVINNDVASLLN 68
Query: 82 HEIIQSPQQSXXXXXXXXXRAQAKPXXXXXXXXXXXXXDGDGXXXXXXXXXXXXXXXXXD 141
E +QSP Q + +P DGDG D
Sbjct: 69 RETVQSPPQDDDENSD-----ENRPKEKSYAILESSESDGDGMEREKKRKKKKRKR---D 120
Query: 142 RSVERGGFDGFGSRKSRVRAWADSEANTVKDYYIDSHGDRDNLAFGCIYRMDVARYRAYN 201
RS E+ GF GSRKSRVRAWADSEANTVKDY+IDSHGDRDNLAFGCIYRMD+AR++ YN
Sbjct: 121 RSDEKSGF---GSRKSRVRAWADSEANTVKDYFIDSHGDRDNLAFGCIYRMDIARHKPYN 177
Query: 202 PLKLSGVHGPGLYWWNQSVSLGERDSDVDSLNSEMKSAGRYWSGKYMALERHKNFKRTRL 261
PL +SG H GLYWWNQS SLGERD D+D+L+ +MKSAGRYWSGKYMALERHK+FKR RL
Sbjct: 178 PLNMSGRHVKGLYWWNQSGSLGERDGDIDALDDKMKSAGRYWSGKYMALERHKSFKRLRL 237
Query: 262 VAPKSSPLTTQEEFIPLSDVGTSHGAVDNDSDSKISASLEESLEDQMLNKTKEFNKLTRE 321
VAPK SP TTQ+EFIPLSDVGTS GAVD++SDSKIS+SLEES ED+MLNKT+EFNKLTRE
Sbjct: 238 VAPKLSPHTTQDEFIPLSDVGTSQGAVDSESDSKISSSLEESWEDEMLNKTREFNKLTRE 297
Query: 322 HPHDEKVWIAFAEFQDRVAGMQRQKGARLQTLEKKISILEKAVELNPENEDLLLCLLKAY 381
+PHDE VW+ FAEFQD+VAGMQRQKGARLQ LEKKISILEKAVELNPENE+LLLCLLKAY
Sbjct: 298 NPHDEIVWLHFAEFQDKVAGMQRQKGARLQILEKKISILEKAVELNPENENLLLCLLKAY 357
Query: 382 QTRDSSDVLIGRWEKILLQHSGSYKLWREFLHVVQRNFSKFKVSVVRKMYAHAIEALSAS 441
QTRDSSDVLIGRWEKILLQHSGSYKLW EFLHVVQRNFSKFKVS+VRKMYA+AIEALSAS
Sbjct: 358 QTRDSSDVLIGRWEKILLQHSGSYKLWSEFLHVVQRNFSKFKVSMVRKMYAYAIEALSAS 417
Query: 442 CSKHYRQVHRAADPSSPDPVIVQLELGLVDIFLNLCRFEWQAGYRELATALFQAEIEFSL 501
SKH RQ +A D SS DP IVQ EL LVDIFL+LCRFEWQAGYRE+ATALFQAEIEFSL
Sbjct: 418 GSKHSRQALQA-DDSSLDPAIVQQELRLVDIFLSLCRFEWQAGYREVATALFQAEIEFSL 476
Query: 502 FCPPLQLTEHSKQRLFEHFWNSDGARIGEEGALGWSTWLEKEEETRQRVLKEEPSLENEG 561
FCPPL LTE SKQRLFEHFWNS GAR+GEEGALGWSTWLEKEEETRQRV+KEE S ENEG
Sbjct: 477 FCPPLLLTEQSKQRLFEHFWNSHGARVGEEGALGWSTWLEKEEETRQRVVKEELSHENEG 536
Query: 562 GGWTGWSEPLSEDKEAIANVENESENDFVMEDNQDEDEGKDVEPEVDTENLLNLLGIDVN 621
GGW+GWSEPLS+DKE AN ENE++ND VMEDNQDEDE KDVEPE DTENLL LLGID+N
Sbjct: 537 GGWSGWSEPLSKDKEGTANFENETDNDLVMEDNQDEDEYKDVEPEDDTENLLKLLGIDIN 596
Query: 622 SGDGGEVTEASTWIKWSAEESSRDCDQWMPVRXXXXXXXXXXXX-XXXXXXQLLRIILYE 680
+GDGGEV + TWIKWS EESSRDCDQWMP+R QL RIILYE
Sbjct: 597 AGDGGEVNDTLTWIKWSEEESSRDCDQWMPIRRKLDTTTSTSEALETEEDEQLSRIILYE 656
Query: 681 DVTEYLFTLSTEEARLSLVSQFIDFYGGKMSHLFCSNSPSWTENVLSMEDLPDSMLEKLK 740
DV+EYLFTL+T+EARL LVSQFIDFYGGK S LF +NSP+WTEN LS+EDLPDSMLEKLK
Sbjct: 657 DVSEYLFTLNTKEARLYLVSQFIDFYGGKTSQLFSTNSPTWTENTLSLEDLPDSMLEKLK 716
Query: 741 CIHEVLTKTKNSPAGFNFEFPSGSLSSNADIMKFVRNAVLLCLTVFPRNHILEEAVLISE 800
CIH VLTK ++ P F +F GS NAD+MKFVRNAVLLCLTVFPRNH+LEEAVLI E
Sbjct: 717 CIHNVLTKAQSIPTSFTLDFLLGSSMRNADMMKFVRNAVLLCLTVFPRNHVLEEAVLICE 776
Query: 801 ELYVTKMNSSNCMATPCRALAKSLLKSDRQDVLLCGVYAQREANYGNIDLARKVFDMALL 860
EL+VTKMNSSN TPCRALAKSLLKSDRQDVLLCGVYA+REA+YGNIDLARKVFDMALL
Sbjct: 777 ELFVTKMNSSNRGVTPCRALAKSLLKSDRQDVLLCGVYARREADYGNIDLARKVFDMALL 836
Query: 861 SVEGLPVE-LQSSAPLLYFWYAEMELENNSGGDREPSYRAIHVLSCLGNGTKYNPFKSQA 919
SVEGLP E +QS+APLL+ WYAE+EL NN+ G RE SYRAIH+LSCLGNGTKY PFKSQA
Sbjct: 837 SVEGLPPEEIQSNAPLLHLWYAEVELANNTNGGRESSYRAIHILSCLGNGTKYTPFKSQA 896
Query: 920 SSLQVLRAHQGFKERLRTVRSSWVRGMINDHSVALVCSAALFEELTTGWEAGIEVLDQAF 979
SSLQ+LRA QGFKE+LRTV SSW RG+IND SVALVCSA+LFEELT+G +AGIEVLDQAF
Sbjct: 897 SSLQLLRARQGFKEKLRTVLSSWFRGIINDQSVALVCSASLFEELTSGCDAGIEVLDQAF 956
Query: 980 AAVLPERRSISYQLEFLFNYYIRILRRHQRQSSLLKVWESISQGLQIYPFSPELLKGVVE 1039
VLPERRS SYQLEFLFNYYIR+L+RHQ+QS L+KVWES+SQGLQ+YP+SPELLKGVVE
Sbjct: 957 TMVLPERRSHSYQLEFLFNYYIRMLQRHQKQSGLMKVWESVSQGLQLYPYSPELLKGVVE 1016
Query: 1040 VGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRGGSHHRIRGLFERALGNDRLCS 1099
VGHFHTTSN+LRRILD+ CYKKPSV+VWLF LSYEMSRGGS HRIRGLFERA+ ND LCS
Sbjct: 1017 VGHFHTTSNKLRRILDERCYKKPSVVVWLFALSYEMSRGGSIHRIRGLFERAVSNDMLCS 1076
Query: 1100 SVVLWRCYLVYELNIAHDPSSARRVFFRAIHACPWSKRLWLDGFHQLNSVLTGKELSDLQ 1159
SVVLWRCY+ YELNIAHDPS+ARR+FFRAIHACPWSKRLWLDGF +LNS+LTGKELSDLQ
Sbjct: 1077 SVVLWRCYIGYELNIAHDPSAARRIFFRAIHACPWSKRLWLDGFLKLNSILTGKELSDLQ 1136
Query: 1160 EVMRDKELNLRTDIYEILLQES 1181
EVMRDKELNLRTDIYEILLQES
Sbjct: 1137 EVMRDKELNLRTDIYEILLQES 1158
>Medtr6g072590.1 | disease resistance protein (TIR-NBS-LRR class),
putative | LC | chr6:26884007-26890210 | 20130731
Length = 1278
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 80/107 (74%), Gaps = 5/107 (4%)
Query: 982 VLPERRSISYQLEFLFNYYIRILRRHQRQSSLLKVWESISQGLQIYPFSPELLKGVVEVG 1041
V E ++ ++Q+ + F + RRHQ QS L KVWESIS+ Q+YPFS ELLKGVVE+G
Sbjct: 1177 VYSELKAWTWQIIYKFFH-----RRHQHQSGLKKVWESISEVFQMYPFSTELLKGVVEIG 1231
Query: 1042 HFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRGGSHHRIRGLF 1088
HFHT SN+L R+ D+ Y+K SV++WLF LS+EMSRG SHHRIR LF
Sbjct: 1232 HFHTKSNKLHRVQDEWSYRKLSVVIWLFLLSWEMSRGCSHHRIRRLF 1278
>Medtr6g074610.1 | hypothetical protein | LC | chr6:27589560-27585855
| 20130731
Length = 326
Score = 124 bits (312), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%)
Query: 1016 VWESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEM 1075
V+++ LQ+ PF PE LKGVVE G+FHT SN+L++IL +CCYKKPSV+VWL LS+EM
Sbjct: 9 VFDTCDYILQLNPFGPEFLKGVVEFGNFHTMSNKLQQILKECCYKKPSVVVWLSALSFEM 68
Query: 1076 SRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHD 1117
R GSHHRI GL+ER LGND L SV+ W ELN+ D
Sbjct: 69 CRDGSHHRIYGLYERVLGNDMLNISVLHWEVMWDKELNLTTD 110
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 27/113 (23%)
Query: 1068 LFTLSYEMSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFR 1127
LF LSYEMS GGS+HRI GLFE A+ ND LC+SVVLW CY+ YE+NIAHDP +A + F
Sbjct: 189 LFALSYEMSIGGSNHRICGLFEMAVSNDMLCNSVVLWHCYIGYEMNIAHDPYAAPHICFL 248
Query: 1128 AIHACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNLRTDIYEILLQE 1180
SK +WLDGF L+L+T+IYEILLQE
Sbjct: 249 RTR----SKLIWLDGF-----------------------LSLKTNIYEILLQE 274
>Medtr6g075030.1 | UPF0614 C14orf102-like protein | HC |
chr6:27713376-27712479 | 20130731
Length = 78
Score = 105 bits (263), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/81 (64%), Positives = 58/81 (71%), Gaps = 4/81 (4%)
Query: 1075 MSRGGSHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSARRVFFRAIHACPW 1134
MS GGS+HRIRGLFE AL ND LC+SVVLW CY+ YELNIAHDP +AR + F
Sbjct: 1 MSIGGSNHRIRGLFEMALSNDMLCNSVVLWHCYMGYELNIAHDPYAARHICFLRTR---- 56
Query: 1135 SKRLWLDGFHQLNSVLTGKEL 1155
SK +WLDGF L SVLTG L
Sbjct: 57 SKLIWLDGFLSLKSVLTGSFL 77
>Medtr6g072640.1 | UPF0614 C14orf102-like protein, putative | HC |
chr6:26909716-26910287 | 20130731
Length = 83
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 50/63 (79%), Gaps = 5/63 (7%)
Query: 1110 YELNIAHDPSSARRVFFRAIHACPWSKRLWLDGFHQLNSVLTGKELSDLQEVMRDKELNL 1169
+ LNIAHDPS++R +F RAIHACPWSKRL D F VLTGKELSDL +V RDKELN+
Sbjct: 3 WVLNIAHDPSASRCIFIRAIHACPWSKRLQWDKF-----VLTGKELSDLHKVTRDKELNM 57
Query: 1170 RTD 1172
RT+
Sbjct: 58 RTE 60
>Medtr6g072310.1 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr6:26752279-26757982 | 20130731
Length = 1196
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 7/76 (9%)
Query: 1019 SISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRG 1078
+ISQG+Q++PFSPE E+G FH +L RIL++CCYKKPSV+ L LS +MSR
Sbjct: 1101 TISQGIQLHPFSPETCS---ELGKFH----KLGRILNECCYKKPSVVTCLCALSCDMSRD 1153
Query: 1079 GSHHRIRGLFERALGN 1094
SHHRI LFERA+ N
Sbjct: 1154 FSHHRICWLFERAVSN 1169
>Medtr6g074780.1 | disease resistance protein (TIR-NBS-LRR class),
putative | LC | chr6:27665466-27660744 | 20130731
Length = 1011
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 34/37 (91%)
Query: 1024 LQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYK 1060
L+IYPFSPELLKGVVEVGHF T SN+L RILD+CCYK
Sbjct: 975 LKIYPFSPELLKGVVEVGHFLTISNKLLRILDECCYK 1011
>Medtr6g074160.1 | hypothetical protein | HC | chr6:27423848-27422496
| 20130731
Length = 120
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 1045 TTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSRGGSHHRIR 1085
TTSN+LRRIL +CCYKKPSV++WLF LS +MSR S HRIR
Sbjct: 78 TTSNKLRRILCECCYKKPSVVIWLFALSCDMSRDCSQHRIR 118
>Medtr6g478020.1 | disease resistance protein (TIR-NBS-LRR class) | LC
| chr6:28783811-28790407 | 20130731
Length = 1254
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1080 SHHRIRGLFERALGNDRLCSSVVLWRCYLVYELNIAHDPSSA 1121
SHHRI GLFE+AL D L SSVVL+RCY+ +EL IA+DPS++
Sbjct: 1213 SHHRICGLFEKALDKDMLYSSVVLFRCYIRHELYIAYDPSAS 1254
>Medtr6g472240.1 | hypothetical protein | HC | chr6:26059889-26060912
| 20130731
Length = 139
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 23/69 (33%)
Query: 1018 ESISQGLQIYPFSPELLKGVVEVGHFHTTSNRLRRILDDCCYKKPSVLVWLFTLSYEMSR 1077
ESIS+GLQ+ PFSPE+L+GVV KP +LF LSYEMSR
Sbjct: 39 ESISRGLQLQPFSPEILEGVV----------------------KPFATAFLFALSYEMSR 76
Query: 1078 -GGSHHRIR 1085
GGSHH+IR
Sbjct: 77 GGGSHHKIR 85
>Medtr6g074790.1 | hypothetical protein | HC |
chr6:27669410-27668555 | 20130731
Length = 58
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 4/43 (9%)
Query: 478 RFEWQAGYRELATALFQAEIEFSLFCPPLQLTEHSKQRLFEHF 520
RFEWQA Y+E+ATAL I+FSLF PPL L E SK+RLFEHF
Sbjct: 20 RFEWQACYKEVATAL----IKFSLFGPPLLLRELSKRRLFEHF 58