Miyakogusa Predicted Gene

Lj2g3v0609800.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609800.2 CUFF.34825.2
         (349 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g077740.1 | peptidoglycan-binding LysM domain protein, put...   367   e-102
Medtr1g037450.1 | peptidoglycan-binding LysM domain protein, put...   190   1e-48

>Medtr6g077740.1 | peptidoglycan-binding LysM domain protein,
           putative | HC | chr6:29186028-29189722 | 20130731
          Length = 338

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/337 (61%), Positives = 232/337 (68%), Gaps = 28/337 (8%)

Query: 21  MSYIKHQVSKLDTLAGVAIKYGVEVADIKRMNGLASDLQMFALKTLKIXXXXXXXXXXXX 80
           +SYI+H VSK DTLAGVAIKYGVEVAD+KRMNGLASDLQMFALKTL+I            
Sbjct: 22  LSYIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLASDLQMFALKTLRIPLPGRHPPSPVP 81

Query: 81  XXXXXXXAKLRENGNHRRFPRLGQSAMKEPLQNFRLKAPQPKLSPAMSILQKYYGLQXXX 140
                  AKLREN + RR PR GQSAMKEPLQ+ RLK P+ K+SPAM+ILQKYYGL    
Sbjct: 82  DEP----AKLRENSSERRPPRNGQSAMKEPLQSLRLKPPKQKISPAMTILQKYYGLDSSN 137

Query: 141 XXXXXXXXXMAMYRXXXXXXXXEEWLPKASPISDLPTNHNPKSTNLVFDLLTGYDDMPEY 200
                    +AMY         ++WLPK SPI     NH+ KSTNL FDLLTG D++ +Y
Sbjct: 138 SRDTSGETELAMYTSSTSDHSRDDWLPKPSPI----PNHHSKSTNLPFDLLTGNDEVSDY 193

Query: 201 VPFAEMGDGGGEKSDEKSVRRRQKAEVDNGNTTPER------XXXXXXXXXXTGKAISMR 254
           + F ++ DGGG++SDEKSVRRRQKA+VDNG TTPER                 GK  SMR
Sbjct: 194 MCFTDISDGGGDRSDEKSVRRRQKADVDNGGTTPERLFKEGNNSNGSNGSSSNGKTFSMR 253

Query: 255 PKSASRATLLPE-SESGWLDSIPMGLGDSIFTDRLSGVRKSSSASSLREQEKNNS-ATGW 312
           PKSASRA+L PE S+SGWLDSI +GLGDSIF D LSGVRKSSSASSLREQEK NS AT W
Sbjct: 254 PKSASRASLFPESSDSGWLDSISVGLGDSIFVDGLSGVRKSSSASSLREQEKYNSAATAW 313

Query: 313 PPARWSLKPDLQAAISKPIFDGLPIPISGRRSKAALD 349
           P             ISKPIFDGLPIPI+GRRSK ALD
Sbjct: 314 P------------TISKPIFDGLPIPITGRRSKTALD 338


>Medtr1g037450.1 | peptidoglycan-binding LysM domain protein,
           putative | HC | chr1:13809048-13813353 | 20130731
          Length = 351

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 178/340 (52%), Gaps = 38/340 (11%)

Query: 21  MSYIKHQVSKLDTLAGVAIKYGVEVADIKRMNGLASDLQMFALKTLKIXXXXXXXXXXXX 80
           + YI+H VSK DTL G+AIKYGVEV DIKRMN L +D QMFALKT++I            
Sbjct: 39  LGYIEHHVSKFDTLVGIAIKYGVEVTDIKRMNSLVTDHQMFALKTVQIPLPGRHPPSPCL 98

Query: 81  XXXXXXXAKLRENGNHRRFPRLGQSAMKEPLQNF---RLKAPQPKLSPAMSILQKYYGLQ 137
                       NGN    P    +A +E L++F   +LK+   K+SPAM  LQ YYGL 
Sbjct: 99  SNGSITPG----NGNSTHSP--PDNAHRELLESFQSTKLKSSDRKVSPAMISLQGYYGLP 152

Query: 138 XXXXXXXXXXXXMAMYRXXXXXXXXEEWLPKASPISDLPTNHNPKSTNLVFDLLTGYDDM 197
                                         K SP S  P + + KS +LV  +L    + 
Sbjct: 153 SNPSENGSSS--------------------KNSPNSYRPLSRHRKSKSLVNVILEEIMEK 192

Query: 198 PEYVPFAEMGDGGGEKSDEKSVRRRQKAEVDNGNTTP----ERXXXXXXXXXXTGKAISM 253
            +  P A+  +    K ++K V+RRQK+  D          E           TGK +++
Sbjct: 193 DDTAPGAQPWELSSVKRNDKLVQRRQKSVADFSRIPELILREDNSSSGGLPSRTGKGLAL 252

Query: 254 RPKSASRATLLPESESGWLDSIPMGLGDSIFTDRLSGVRKSSSASSLREQEKNNSATGWP 313
           R K+ASR  L  +SES  L  +PM +GD + TD  SGV+KSSS S L +Q+ N S++ WP
Sbjct: 253 RQKAASRTPLPIDSESSGLVPVPMSMGDDVQTDCSSGVKKSSSTSCLHDQD-NCSSSIWP 311

Query: 314 PARWSLKPDLQ----AAISKPIFDGLPIPISGRRSKAALD 349
              W+LKPDLQ    AAI KPIFDGLP P++GRR+KAALD
Sbjct: 312 SKMWNLKPDLQALSTAAIKKPIFDGLPKPLTGRRNKAALD 351