Miyakogusa Predicted Gene

Lj2g3v0609710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609710.1 Non Characterized Hit- tr|G7KKB5|G7KKB5_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,81.26,0,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF4101,Domain of unkno,CUFF.34820.1
         (815 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g077830.1 | plastid division protein CDP1 | HC | chr6:2922...  1245   0.0  
Medtr1g023310.1 | protein accumulation AND replication OFs prote...   103   6e-22

>Medtr6g077830.1 | plastid division protein CDP1 | HC |
           chr6:29228939-29221801 | 20130731
          Length = 810

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/816 (77%), Positives = 687/816 (84%), Gaps = 9/816 (1%)

Query: 1   MALANAAVIGPSLYGVARIGYYEPKVPFLXXXXXXXXXXXXXXXXXXXXHAGKSDVVLER 60
           MALANAAVIGPSLY VARI     K PF                     HAGKSDVVLER
Sbjct: 1   MALANAAVIGPSLYSVARI----TKAPF-PGSHGEIGSRFCGSAFCVCSHAGKSDVVLER 55

Query: 61  RKLKNVD-NNVRVVESAQMKFTVEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGY 119
           RKLK  D NN R+VE+  +K TVEIPVSCYQLIGVPDRAEKDEIVKAVM LKNAEI+EGY
Sbjct: 56  RKLKFGDSNNNRIVENQVLKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGY 115

Query: 120 TISVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRVPWSWLPAALCLLQEVGESK 179
           T+ VVASR+DLLMDVRDKLLFEPEYAGNLKEKIPPK SLR+PWSWLP ALCLLQE+GESK
Sbjct: 116 TMGVVASREDLLMDVRDKLLFEPEYAGNLKEKIPPKPSLRIPWSWLPGALCLLQEIGESK 175

Query: 180 LVLDIGRTSLQQQDAKPYTDDLVLSMALAECAVAKIGFEKNKVSQGFEALARAQCLLRSK 239
           LVLDIGRTSLQ QDAKPY DDLVLSMALAEC VAKIGFEKNKVSQGFEALARAQCLLRSK
Sbjct: 176 LVLDIGRTSLQHQDAKPYADDLVLSMALAECTVAKIGFEKNKVSQGFEALARAQCLLRSK 235

Query: 240 PSLAKMTXXXXXXXXXXXXAPACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEAS 299
           PSLAKMT            APACTLELLS+ NTPEN++RRRGAIAALRELLRQGLDVEAS
Sbjct: 236 PSLAKMTLLSQIEESLEELAPACTLELLSVPNTPENVERRRGAIAALRELLRQGLDVEAS 295

Query: 300 CQVQDWPSFLSQALGCLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFT 359
           CQVQDWPSFLSQA   LLANEIVDLLPWDSLAVMRKNKKTIESQNLR++IDS+CFYRVFT
Sbjct: 296 CQVQDWPSFLSQAFHNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRIVIDSNCFYRVFT 355

Query: 360 AHLALGFSSKHKELIHKAKNICECLIASEGFDLKFEEAFCLFLLGLGTEAEAVEKLKQLE 419
           AH+ALGFSSK KELI+KAK+ICECLIASEG DLKFEEAFCLFLLGLGTE EAVEKLKQLE
Sbjct: 356 AHMALGFSSKQKELINKAKSICECLIASEGIDLKFEEAFCLFLLGLGTEEEAVEKLKQLE 415

Query: 420 LNSNPKHNSVLGKAIMDASDANPSLEMWLKDSVLDLYPDTKGCSPALASFFNAQKKISGS 479
           LNSNPK NSVLGKAIMD+S  NPSLE+WLKDS LDLYPDTKGCSPALA+FFNAQKK SGS
Sbjct: 416 LNSNPKRNSVLGKAIMDSSAVNPSLELWLKDSALDLYPDTKGCSPALANFFNAQKKFSGS 475

Query: 480 KNSKGATQTSSTICHRPLSSSGSVERRDFEEPRSYMSSSPNLGFAVKQLAPTDLQSSLLS 539
           KNSKG+ Q   TICHRPLSSSGSVER+DFEEPRSYMSSS NLGFAVKQL PTDLQ SLLS
Sbjct: 476 KNSKGSPQMFPTICHRPLSSSGSVERKDFEEPRSYMSSSSNLGFAVKQLTPTDLQGSLLS 535

Query: 540 GKNENGPNLSESPVKVKRSLGTHHNGVWDSHFTGAHIFERITHFTVLGCIAFATIKLLGI 599
           GKNENG N SE  VKVKR+L THHNG+W++HFT A +FERITH T+LGCIAFA +KLLG+
Sbjct: 536 GKNENGVNQSEQTVKVKRNLSTHHNGIWNNHFTRAQVFERITHITILGCIAFACMKLLGM 595

Query: 600 NISKNFTGSNWAFTKANHNIAWTADSSSNYPVGP-YMRRSTISDKLERILSRVKIHFLHR 658
           N+ KN  GSN AF KA+ + +WT +SS+NY VGP Y+RRS++ +KL+ ++S VK+ FL R
Sbjct: 596 NLGKN--GSNLAFKKAHTSTSWTTNSSANYTVGPTYIRRSSVGNKLKGLISMVKMQFLRR 653

Query: 659 SDAGFRSDLHTAHSSSSFSIKVYRRQMPVEEAETLIRQWQEIKAEALGPSHEVNSLAEVL 718
            DA  RS LH+  +SSS  I VYRR MPVEEAETLIR+WQ IKAEALGPSHEVN L +VL
Sbjct: 654 PDAESRSGLHSTLTSSSSPINVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLTDVL 713

Query: 719 DEPMLAQWQALADAAKEKSCHWRFLLLKLSVLRADILSDGNETDMXXXXXXXXXXXXXVD 778
           DE MLAQWQALADAA E+SCHWRFLLLKLSVLRADILSDGN +D+             VD
Sbjct: 714 DESMLAQWQALADAAIEQSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVD 773

Query: 779 SSQQKNPNYLSTYKVRYVLKMQDDGSWKFCEGDIRT 814
           SSQQKNPNY STYKV+YV+K QDDGSWKFCE DI+T
Sbjct: 774 SSQQKNPNYYSTYKVKYVVKRQDDGSWKFCEADIQT 809


>Medtr1g023310.1 | protein accumulation AND replication OFs protein
           | HC | chr1:7461179-7455380 | 20130731
          Length = 796

 Score =  103 bits (258), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 178/787 (22%), Positives = 298/787 (37%), Gaps = 131/787 (16%)

Query: 82  VEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIEEGYTISVVASRQDLLMDVRDKLLFE 141
           V +P+  Y+++G       D I +A     +   +  ++   + SR+ +L    + L  +
Sbjct: 82  VSLPLDLYKILGAETHFLGDGIRRAYEAKFSKPPQYAFSNEALISRRQILQAACETLA-D 140

Query: 142 P----EYAGNL--KEKIPPKSSL--RVPWSWLPAALCLLQEVGESKLVLDIGRTSLQQQD 193
           P    EY  +L   E    +SS+   +P+  +P ALC+LQE GE++LVL IG   L+++ 
Sbjct: 141 PASRREYNQSLVDDEDEDEESSILTEIPFDKVPGALCVLQEAGETELVLRIGGGLLRERL 200

Query: 194 AKPYTDDLVLSMALAECAVAK--IGFEKNKVSQGFEALARAQCLLRSK--PSLAKMTXXX 249
            K +  D+VL+MALA   V++  +           E L RA  LL+ +   SLA      
Sbjct: 201 PKMFKQDVVLAMALAYVDVSRDAMALSPPDFIVACEMLERALKLLQEEGASSLAP-DLQT 259

Query: 250 XXXXXXXXXAPACTLELLSMSNTPENIDRRRGAIAALRELLRQGLDVEASCQVQDWP--S 307
                     P C LELL++    E+  RR   +  +R +L       A+     +    
Sbjct: 260 QIDETLEEITPRCVLELLALPLDDEHRARREEGLQGVRNILWAVGGGGAAAIAGSFTRED 319

Query: 308 FLSQALGCLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVIIDSSCFYRVFTAHLALGFS 367
           F+++A   + A E V+L               I +++          Y V  A +A  F 
Sbjct: 320 FMNEAFLHMKAAEQVELF--------VATPSNIPAESFEA-------YGVALALVAQAFV 364

Query: 368 SKHKELIHKAKNICECL-------------------IASEGFDLKFEEAFCLFLLGLGTE 408
            K   LI  A N+   L                   +     D   E   C  L+G   E
Sbjct: 365 GKKPHLIQDADNLFHQLQQTKVTNMRNAPSVYTPMEMEKREVDFALERGLCALLVG---E 421

Query: 409 AEAVEKLKQLELNSNPKHNSVLGKAIMDASDANPS---------LEMWLKDSVLDLYPDT 459
            +       L+ +S+P  N  +   IM+ +  +           LE WL + V   + DT
Sbjct: 422 LDQCRSWLGLDSDSSPYRNPSIIDFIMENAKGDEDSDLPGLCKLLETWLMEVVFPRFRDT 481

Query: 460 KGCSPALASFFNAQKKISGSKNSKGATQTSSTICHRPLSSSGSVERRDFEEPRSYMSSSP 519
           K  +  L  +++    +   +  +GA        H PL+++ ++ +   E          
Sbjct: 482 KETNFKLGDYYDDPTVLRYLERLEGAG-------HSPLAAAAAIAKIGAEATAVIGHVQA 534

Query: 520 NLGFAVKQLAPTDLQSSLLS------------GKNENGPNLSES--PVKVKRSLGTHHNG 565
           ++  A+K++ P    + +L+             +NE+   LS+   PV V+ S   +   
Sbjct: 535 SVIKALKRVFPVRSDNKILTYEVNGEKDHSSLSENEDPLRLSDQNPPVNVEVSGIKNTAE 594

Query: 566 VWDSHFTGAHIFERITHFTVLGCIAFATIKLLGINISKNFTGSNWAFTKANHNIAWTADS 625
           + D +F    I          G +A   I L G+ I  +  GS        H +  +A +
Sbjct: 595 INDGNFITDEIKNASVKIMCAG-VAIGLITLAGLKILPSKNGS-----PVLHKVTGSAIA 648

Query: 626 SSNYPVGPYMRRSTISDKLERILSRVKIHFLHRSDAGFRSDLHTAHSSSSFSIKVYRRQM 685
           S    +GP +    + ++L ++ + V                                  
Sbjct: 649 SDTINLGP-VGDEELGEQLPKMSAMV---------------------------------- 673

Query: 686 PVEEAETLIRQWQEIKAEALGPSHEVNSLAEVLDEPMLAQWQALADAAKEKSCHWRFLLL 745
               AE L+R+WQ IK++A GP H +  L EVLD  ML  W   A    E    + + L 
Sbjct: 674 ----AEALVRKWQYIKSQAFGPDHCLGRLQEVLDGEMLKIWTDRAAEIAELGWSYDYNLE 729

Query: 746 KLSVLRADILSDGNETDMXXXXXXXXXXXXXVDSSQQKNPNYLSTYKVRYVLKMQDDGSW 805
            L++    I  +G    +             V   Q    N   TY  RY +   D G W
Sbjct: 730 DLNIDSVTISQNGRRA-VVETTLKESTHLTAVGHPQHATSNS-RTYTTRYEMSFSDSG-W 786

Query: 806 KFCEGDI 812
           K  EG +
Sbjct: 787 KIIEGAV 793