Miyakogusa Predicted Gene

Lj2g3v0609650.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0609650.1 tr|Q00W99|Q00W99_OSTTA ROOT HAIRLESS 1 (ISS)
(Fragment) OS=Ostreococcus tauri GN=Ot14g01130 PE=4
SV=,40.91,1e-16,seg,NULL,CUFF.34813.1
         (441 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g077860.1 | DNA-binding protein RHL1, putative | HC | chr6...   508   e-144
Medtr6g077860.2 | DNA-binding protein RHL1, putative | HC | chr6...   499   e-141
Medtr6g077860.3 | DNA-binding protein RHL1, putative | HC | chr6...   493   e-139
Medtr6g077860.4 | DNA-binding protein RHL1, putative | HC | chr6...   450   e-126

>Medtr6g077860.1 | DNA-binding protein RHL1, putative | HC |
           chr6:29234964-29244137 | 20130731
          Length = 424

 Score =  508 bits (1308), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/430 (64%), Positives = 304/430 (70%), Gaps = 36/430 (8%)

Query: 23  NPEVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSF 82
           NPE  ER RLKS AFSNN+LSET ARSSIHLNPSSIVAKHHGKDIIKKS RKSSR+LFSF
Sbjct: 20  NPETIERKRLKSLAFSNNVLSETKARSSIHLNPSSIVAKHHGKDIIKKSQRKSSRYLFSF 79

Query: 83  PGLFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVM 142
           PGLFAP+ GGKIGDLKDLGTKNPILYLDFPQGRMKLFGTI+YPKNRYLTLQFS+GGKSVM
Sbjct: 80  PGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILYPKNRYLTLQFSKGGKSVM 139

Query: 143 CEDFFDNMIVFSDAWWIGRKDENPEEARLEFPKELYEGQQAEYDFK----XXXXXXXXSV 198
           CED+FDNMIVFSDAWWIG KDENPEEA+LEFPKELYEG+Q E+DFK            SV
Sbjct: 140 CEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTEHDFKGGAGAGAGAGAASV 199

Query: 199 VNQGVTRTRVQPAEEDSPETPIEDDLSEESEINLKDTKELVPVRHSARTATKSYKFAXXX 258
           VN GV++T+++  E +SPETP+E+DLS +SEI LKDT ELVPVR SART  KSYKFA   
Sbjct: 200 VNHGVSKTKIKRPEPESPETPLEEDLS-DSEIELKDTTELVPVRQSARTVKKSYKFAEIS 258

Query: 259 XXXXXXXXX-XLSEHEEK-VEVDTSANGHNTAKIETVVXXXXXXXXXXXXQLPTENKECA 316
                      LSEHEEK VEVDT AN H ++K ET V            QLP ENKE A
Sbjct: 259 SGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSKKETAVIDIDDEDDAPKDQLPVENKEPA 318

Query: 317 SESKRKKVYQSASGTATTEVVSSTRGSLVQATISTLFKKVEEKKAPRDSKKSLSSKASG- 375
           S SK KK                  G LVQATIS+LFKKVE KKA  + KKS SSKASG 
Sbjct: 319 SVSKAKK------------------GLLVQATISSLFKKVEVKKAAANPKKSPSSKASGQ 360

Query: 376 ----FGSKRKTDLDEGSRKRARKTKDKDPGXXXXXXXXXXXXXXXXXXXXXXXFSNAAEG 431
                GSKRK +LDEG +KRARKTKDK+PG                       FSNA+E 
Sbjct: 361 KSQPAGSKRKIELDEGPKKRARKTKDKNPG---EKKKAKSKDSEVEDDDDIEEFSNASED 417

Query: 432 TDASDEDWAA 441
              SDEDWAA
Sbjct: 418 ---SDEDWAA 424


>Medtr6g077860.2 | DNA-binding protein RHL1, putative | HC |
           chr6:29234949-29244137 | 20130731
          Length = 390

 Score =  499 bits (1284), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 266/390 (68%), Positives = 291/390 (74%), Gaps = 30/390 (7%)

Query: 23  NPEVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSF 82
           NPE  ER RLKS AFSNN+LSET ARSSIHLNPSSIVAKHHGKDIIKKS RKSSR+LFSF
Sbjct: 20  NPETIERKRLKSLAFSNNVLSETKARSSIHLNPSSIVAKHHGKDIIKKSQRKSSRYLFSF 79

Query: 83  PGLFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVM 142
           PGLFAP+ GGKIGDLKDLGTKNPILYLDFPQGRMKLFGTI+YPKNRYLTLQFS+GGKSVM
Sbjct: 80  PGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILYPKNRYLTLQFSKGGKSVM 139

Query: 143 CEDFFDNMIVFSDAWWIGRKDENPEEARLEFPKELYEGQQAEYDFK----XXXXXXXXSV 198
           CED+FDNMIVFSDAWWIG KDENPEEA+LEFPKELYEG+Q E+DFK            SV
Sbjct: 140 CEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTEHDFKGGAGAGAGAGAASV 199

Query: 199 VNQGVTRTRVQPAEEDSPETPIEDDLSEESEINLKDTKELVPVRHSARTATKSYKFAXXX 258
           VN GV++T+++  E +SPETP+E+DLS +SEI LKDT ELVPVR SART  KSYKFA   
Sbjct: 200 VNHGVSKTKIKRPEPESPETPLEEDLS-DSEIELKDTTELVPVRQSARTVKKSYKFAEIS 258

Query: 259 XXXXXXXXX-XLSEHEEK-VEVDTSANGHNTAKIETVVXXXXXXXXXXXXQLPTENKECA 316
                      LSEHEEK VEVDT AN H ++K ET V            QLP ENKE A
Sbjct: 259 SGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSKKETAVIDIDDEDDAPKDQLPVENKEPA 318

Query: 317 SESKRKKVYQSASGTATTEVVSSTRGSLVQATISTLFKKVEEKKAPRDSKKSLSSKASG- 375
           S SK KK                  G LVQATIS+LFKKVE KKA  + KKS SSKASG 
Sbjct: 319 SVSKAKK------------------GLLVQATISSLFKKVEVKKAAANPKKSPSSKASGQ 360

Query: 376 ----FGSKRKTDLDEGSRKRARKTKDKDPG 401
                GSKRK +LDEG +KRARKTKDK+PG
Sbjct: 361 KSQPAGSKRKIELDEGPKKRARKTKDKNPG 390


>Medtr6g077860.3 | DNA-binding protein RHL1, putative | HC |
           chr6:29234949-29244144 | 20130731
          Length = 389

 Score =  493 bits (1269), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 265/390 (67%), Positives = 290/390 (74%), Gaps = 31/390 (7%)

Query: 23  NPEVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSF 82
           NPE  ER RLKS AFSNN+LSET ARSSIHLNPSSIVAKHHGKDIIKKS RKSSR+LFSF
Sbjct: 20  NPETIERKRLKSLAFSNNVLSETKARSSIHLNPSSIVAKHHGKDIIKKSQRKSSRYLFSF 79

Query: 83  PGLFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVM 142
           PGLFAP+ GGKIGDLKDLGTKNPILYLDFPQGRMKLFGTI+YPKNRYLTLQFS+GGKSVM
Sbjct: 80  PGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILYPKNRYLTLQFSKGGKSVM 139

Query: 143 CEDFFDNMIVFSDAWWIGRKDENPEEARLEFPKELYEGQQAEYDFK----XXXXXXXXSV 198
           CED+FDNMIVFSDAWWIG KDENPEEA+LEFPKELYEG+Q E+DFK            SV
Sbjct: 140 CEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTEHDFKGGAGAGAGAGAASV 199

Query: 199 VNQGVTRTRVQPAEEDSPETPIEDDLSEESEINLKDTKELVPVRHSARTATKSYKFAXXX 258
           VN GV++T+++  E +SPETP+E+DLS +SEI LKDT ELVPVR SART  KSYKFA   
Sbjct: 200 VNHGVSKTKIKRPEPESPETPLEEDLS-DSEIELKDTTELVPVRQSARTVKKSYKFAEIS 258

Query: 259 XXXXXXXXX-XLSEHEEK-VEVDTSANGHNTAKIETVVXXXXXXXXXXXXQLPTENKECA 316
                      LSEHEEK VEVDT AN H ++K ET V            QLP ENKE A
Sbjct: 259 SGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSKKETAVIDIDDEDDAPKDQLPVENKEPA 318

Query: 317 SESKRKKVYQSASGTATTEVVSSTRGSLVQATISTLFKKVEEKKAPRDSKKSLSSKASG- 375
           S SK KK                  G LVQATIS+LFKKVE K A  + KKS SSKASG 
Sbjct: 319 SVSKAKK------------------GLLVQATISSLFKKVEVKAA-ANPKKSPSSKASGQ 359

Query: 376 ----FGSKRKTDLDEGSRKRARKTKDKDPG 401
                GSKRK +LDEG +KRARKTKDK+PG
Sbjct: 360 KSQPAGSKRKIELDEGPKKRARKTKDKNPG 389


>Medtr6g077860.4 | DNA-binding protein RHL1, putative | HC |
           chr6:29234949-29240454 | 20130731
          Length = 346

 Score =  450 bits (1157), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/345 (68%), Positives = 257/345 (74%), Gaps = 25/345 (7%)

Query: 23  NPEVTERNRLKSFAFSNNILSETPARSSIHLNPSSIVAKHHGKDIIKKSHRKSSRFLFSF 82
           NPE  ER RLKS AFSNN+LSET ARSSIHLNPSSIVAKHHGKDIIKKS RKSSR+LFSF
Sbjct: 20  NPETIERKRLKSLAFSNNVLSETKARSSIHLNPSSIVAKHHGKDIIKKSQRKSSRYLFSF 79

Query: 83  PGLFAPVAGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTIVYPKNRYLTLQFSRGGKSVM 142
           PGLFAP+ GGKIGDLKDLGTKNPILYLDFPQGRMKLFGTI+YPKNRYLTLQFS+GGKSVM
Sbjct: 80  PGLFAPIGGGKIGDLKDLGTKNPILYLDFPQGRMKLFGTILYPKNRYLTLQFSKGGKSVM 139

Query: 143 CEDFFDNMIVFSDAWWIGRKDENPEEARLEFPKELYEGQQAEYDFK----XXXXXXXXSV 198
           CED+FDNMIVFSDAWWIG KDENPEEA+LEFPKELYEG+Q E+DFK            SV
Sbjct: 140 CEDYFDNMIVFSDAWWIGTKDENPEEAKLEFPKELYEGKQTEHDFKGGAGAGAGAGAASV 199

Query: 199 VNQGVTRTRVQPAEEDSPETPIEDDLSEESEINLKDTKELVPVRHSARTATKSYKFAXXX 258
           VN GV++T+++  E +SPETP+E+DLS +SEI LKDT ELVPVR SART  KSYKFA   
Sbjct: 200 VNHGVSKTKIKRPEPESPETPLEEDLS-DSEIELKDTTELVPVRQSARTVKKSYKFAEIS 258

Query: 259 XXXXXXXXX-XLSEHEEK-VEVDTSANGHNTAKIETVVXXXXXXXXXXXXQLPTENKECA 316
                      LSEHEEK VEVDT AN H ++K ET V            QLP ENKE A
Sbjct: 259 SGDDSGKSSPDLSEHEEKAVEVDTDANDHTSSKKETAVIDIDDEDDAPKDQLPVENKEPA 318

Query: 317 SESKRKKVYQSASGTATTEVVSSTRGSLVQATISTLFKKVEEKKA 361
           S SK KK                  G LVQATIS+LFKKVE K A
Sbjct: 319 SVSKAKK------------------GLLVQATISSLFKKVEVKVA 345