Miyakogusa Predicted Gene

Lj2g3v0581790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0581790.1 Non Characterized Hit- tr|G7KL50|G7KL50_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,47.06,0.000000006,coiled-coil,NULL; C2H2 and C2HC zinc
fingers,NULL; BED zinc finger,Zinc finger, BED-type predicted;
,CUFF.34758.1
         (399 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g012470.1 | disease resistance protein (TIR-NBS-LRR class)...   248   6e-66
Medtr6g078420.1 | disease resistance protein (TIR-NBS-LRR class)...   129   7e-30
Medtr6g078790.1 | hypothetical protein | HC | chr6:29622256-2961...    67   2e-11

>Medtr3g012470.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | HC | chr3:3471308-3462961 | 20130731
          Length = 1394

 Score =  248 bits (634), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 165/242 (68%), Gaps = 1/242 (0%)

Query: 157  LDDVEMKAFYASLDAETSVTSPSQDTTKVITELSNTTTPCEETKKALKTLQDLLSKDFSV 216
            LDD +M+AFYA LDAETS+ S S +   +I+E SN   P EETKKALKTLQD L+KDFSV
Sbjct: 1154 LDDADMEAFYAILDAETSILSLS-NHNDIISESSNRIIPSEETKKALKTLQDFLTKDFSV 1212

Query: 217  LLHTGQCGAMKSTIGYLSKLSADDGISAEMKLLILEVSREFTRWSCDYNDASKKIESASS 276
            LL   +   MKST+ YL+ +  +DGIS +++ L+ EVSR+FT WS DY +  KKIE   +
Sbjct: 1213 LLRPNEYNTMKSTLDYLTNVPTEDGISVDIRSLVKEVSRQFTCWSHDYTNEGKKIEYTKA 1272

Query: 277  NILKADKLEEGLEANKNEFKEVLSLENELSNXXXXXXXXXXXXXXXINAIKANLSVFQTA 336
             +LK+D+LEEGLEANK  F+EV  LENEL N               IN ++AN++  Q A
Sbjct: 1273 KLLKSDELEEGLEANKTLFREVKYLENELCNELEYLEDRKKELEELINGVRANIAASQEA 1332

Query: 337  KVTAIKRKREVFEEGKALKAQRDELREQVPHLRDEREVAKKIQDNIRAEWSKLGEKFDKS 396
            K   +  KRE+FE  K LK QRDELR QV  LRDE E+AKKIQ NIR EW+KLGEKF K+
Sbjct: 1333 KNMVVHTKREIFENAKILKVQRDELRGQVHCLRDEHELAKKIQANIRDEWAKLGEKFSKA 1392

Query: 397  LN 398
             N
Sbjct: 1393 AN 1394


>Medtr6g078420.1 | disease resistance protein (TIR-NBS-LRR class) | LC
            | chr6:29446140-29438678 | 20130731
          Length = 1410

 Score =  129 bits (323), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 127/221 (57%), Gaps = 22/221 (9%)

Query: 121  SFSQTANVRALTVTASTGNASSPAEL-ESPRNQEELALDDVEMKAFYASLDAETS----- 174
            +F +  NV ++     T NA S   + ES  N++        M++FYASL+AET+     
Sbjct: 1202 TFVEQINVDSINSKNLTLNAESYINIVESTTNEDN-------MESFYASLEAETNSPLHV 1254

Query: 175  -VTSPSQDTTKVITELSNTTTPCEETKKALKTLQDLLSKDFSVLLHTGQCGAMKSTIGYL 233
                P+ +T ++         P EET K L+ L+DL++K FS+LLH G+ G MK  + YL
Sbjct: 1255 QYNQPNNETVRI--------RPSEETVKTLQILEDLVTKKFSLLLHPGRSGLMKDILKYL 1306

Query: 234  SKLSADDGISAEMKLLILEVSREFTRWSCDYNDASKKIESASSNILKADKLEEGLEANKN 293
              L+ D+G+S + K +IL++S  F +WS DYN+A  K+ESA+ N+ KA+K+++ LEAN  
Sbjct: 1307 LTLTPDEGLSLKTKSVILQLSHSFAQWSLDYNNAILKLESATINLTKAEKVKDYLEANVK 1366

Query: 294  EFKEVLSLENELSNXXXXXXXXXXXXXXXINAIKANLSVFQ 334
            +F+E+  +E  LSN               INAIK+ ++ F+
Sbjct: 1367 DFREMDMVEKCLSNQLASLQEEKRELEEKINAIKSEIADFR 1407


>Medtr6g078790.1 | hypothetical protein | HC |
           chr6:29622256-29619492 | 20130731
          Length = 100

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 10/85 (11%)

Query: 161 EMKAFYASLDAETSVTSPSQDTTKVITELSNTTTPCEETKKALKTLQDLLSKDFSVLLHT 220
           +MKAFYASL +    TSPS     VI+       P E+TKKA+  LQDL SKDFS+L H 
Sbjct: 7   DMKAFYASLKSPEE-TSPSH----VIS-----YRPSEKTKKAILILQDLFSKDFSLLFHP 56

Query: 221 GQCGAMKSTIGYLSKLSADDGISAE 245
           G+   MK T+GYLS ++ ++G++ +
Sbjct: 57  GRSIEMKDTLGYLSTVAQEEGLNCD 81