Miyakogusa Predicted Gene

Lj2g3v0561110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0561110.1 Non Characterized Hit- tr|B6U779|B6U779_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,47.78,0.00000000000003,seg,NULL,CUFF.34710.1
         (388 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g069010.2 | hypothetical protein | HC | chr6:24822485-2481...   325   6e-89
Medtr6g069010.1 | hypothetical protein | HC | chr6:24822485-2481...   325   6e-89
Medtr1g090853.1 | DNA-binding protein PD2 | HC | chr1:40906906-4...    63   4e-10

>Medtr6g069010.2 | hypothetical protein | HC |
           chr6:24822485-24817427 | 20130731
          Length = 378

 Score =  325 bits (832), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 195/395 (49%), Positives = 253/395 (64%), Gaps = 24/395 (6%)

Query: 1   MQKKLQIATLSFRSIRFLTPKPNHLSFEVCDSVGPSNVKWRGLSYXXXXXXXXXXXXXQK 60
           M+KKL I   SFR I   TPK NHLSFE     G S ++WRG S+             + 
Sbjct: 1   MRKKLLITLSSFRKIHNFTPKSNHLSFEG----GSSKLQWRGWSHAAAAAAACVPSETED 56

Query: 61  GR-----KRVSKQQRRAIVESFVNKHRSENAGKFPTITDIQKQVGGGFYSIREIIKELEY 115
            R      RVSK +RRA+VESFVNK++SENAGKFP I   QK+VGG +Y++R+II+EL+Y
Sbjct: 57  IRPRKNGSRVSKHERRAMVESFVNKYKSENAGKFPAIKYTQKEVGGSYYTVRDIIQELKY 116

Query: 116 KSKMKSSNNKDEILLEKLIDKSKRETTESVIVSSDNIETSREKPFQDDSLPVLIDGKETV 175
           KSK+KS N+ DEIL+EK++D+SK +T ESV VSS+NIET++++P Q DS  VL+D KE V
Sbjct: 117 KSKVKSLNSTDEILVEKVLDESKLKTAESVNVSSENIETAKDRPIQKDSQSVLLDDKEAV 176

Query: 176 STGYEHLEESLSAPSSENYSNTQGQESEFVDTENHKKLEEKCINEESYERREQPALENLS 235
           +T  E LEE    P + +       E E + T                +RREQPALE++ 
Sbjct: 177 NTCCE-LEEK-RGPQTFSQEGRLSYEVETIST-----------TVSIDKRREQPALEDMY 223

Query: 236 GETSHSCSQVPNDMNXXXXXXXXXXXXXGQERHLLKEEIDQVFAPSFGKSGNKHSEGQSY 295
           G+ SHS S+V ND+                E HLLKEEI+QV AP   KSG+  S+   +
Sbjct: 224 GKASHSNSEVTNDVKSDETVSSCPSDYVAPEIHLLKEEIEQVSAPIVEKSGSSCSKDHIH 283

Query: 296 --QAVDIENHLTIEKKSFKKAGLERKEQDVLKDLPDVVSQKNKMEQSHGSLELDESKMDS 353
             ++VDI+NH TI+ KSF KAGLERK QD  +DLP V S ++  EQS  SL+LDESK+D 
Sbjct: 284 DSKSVDIKNHPTIKIKSFDKAGLERKVQDGAQDLPVVDSPQHIKEQSQESLKLDESKIDG 343

Query: 354 SDNREPAGLVVSEKSTLWGNLKSFADGIINIWRKF 388
           S+ RE +  V S+KSTLWGNLKSFADG++N+WRK 
Sbjct: 344 SNMRESSVAVASDKSTLWGNLKSFADGVLNMWRKL 378


>Medtr6g069010.1 | hypothetical protein | HC |
           chr6:24822485-24817427 | 20130731
          Length = 378

 Score =  325 bits (832), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 195/395 (49%), Positives = 253/395 (64%), Gaps = 24/395 (6%)

Query: 1   MQKKLQIATLSFRSIRFLTPKPNHLSFEVCDSVGPSNVKWRGLSYXXXXXXXXXXXXXQK 60
           M+KKL I   SFR I   TPK NHLSFE     G S ++WRG S+             + 
Sbjct: 1   MRKKLLITLSSFRKIHNFTPKSNHLSFEG----GSSKLQWRGWSHAAAAAAACVPSETED 56

Query: 61  GR-----KRVSKQQRRAIVESFVNKHRSENAGKFPTITDIQKQVGGGFYSIREIIKELEY 115
            R      RVSK +RRA+VESFVNK++SENAGKFP I   QK+VGG +Y++R+II+EL+Y
Sbjct: 57  IRPRKNGSRVSKHERRAMVESFVNKYKSENAGKFPAIKYTQKEVGGSYYTVRDIIQELKY 116

Query: 116 KSKMKSSNNKDEILLEKLIDKSKRETTESVIVSSDNIETSREKPFQDDSLPVLIDGKETV 175
           KSK+KS N+ DEIL+EK++D+SK +T ESV VSS+NIET++++P Q DS  VL+D KE V
Sbjct: 117 KSKVKSLNSTDEILVEKVLDESKLKTAESVNVSSENIETAKDRPIQKDSQSVLLDDKEAV 176

Query: 176 STGYEHLEESLSAPSSENYSNTQGQESEFVDTENHKKLEEKCINEESYERREQPALENLS 235
           +T  E LEE    P + +       E E + T                +RREQPALE++ 
Sbjct: 177 NTCCE-LEEK-RGPQTFSQEGRLSYEVETIST-----------TVSIDKRREQPALEDMY 223

Query: 236 GETSHSCSQVPNDMNXXXXXXXXXXXXXGQERHLLKEEIDQVFAPSFGKSGNKHSEGQSY 295
           G+ SHS S+V ND+                E HLLKEEI+QV AP   KSG+  S+   +
Sbjct: 224 GKASHSNSEVTNDVKSDETVSSCPSDYVAPEIHLLKEEIEQVSAPIVEKSGSSCSKDHIH 283

Query: 296 --QAVDIENHLTIEKKSFKKAGLERKEQDVLKDLPDVVSQKNKMEQSHGSLELDESKMDS 353
             ++VDI+NH TI+ KSF KAGLERK QD  +DLP V S ++  EQS  SL+LDESK+D 
Sbjct: 284 DSKSVDIKNHPTIKIKSFDKAGLERKVQDGAQDLPVVDSPQHIKEQSQESLKLDESKIDG 343

Query: 354 SDNREPAGLVVSEKSTLWGNLKSFADGIINIWRKF 388
           S+ RE +  V S+KSTLWGNLKSFADG++N+WRK 
Sbjct: 344 SNMRESSVAVASDKSTLWGNLKSFADGVLNMWRKL 378


>Medtr1g090853.1 | DNA-binding protein PD2 | HC |
           chr1:40906906-40903300 | 20130731
          Length = 515

 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 43/55 (78%)

Query: 59  QKGRKRVSKQQRRAIVESFVNKHRSENAGKFPTITDIQKQVGGGFYSIREIIKEL 113
           +K R R SK++R+ +++SF+ K++  N+G FP+IT   K+VGG FY++REI++++
Sbjct: 25  RKTRIRRSKEERKTMIQSFIQKYQESNSGNFPSITLTHKEVGGSFYTVREIVRDI 79