Miyakogusa Predicted Gene

Lj2g3v0561080.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0561080.2 tr|D3AYY8|D3AYY8_POLPA Predicted protein
OS=Polysphondylium pallidum GN=PPL_00907 PE=4 SV=1,36.09,2e-18,
,CUFF.34709.2
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g069050.1 | ser/thr phosphatase family protein | HC | chr6...   418   e-117

>Medtr6g069050.1 | ser/thr phosphatase family protein | HC |
           chr6:24840126-24835251 | 20130731
          Length = 382

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 188/220 (85%), Positives = 206/220 (93%)

Query: 2   VVGELGIIPLFSWYHESFDKEKDITGFHIPPLEMACKDFHACKWPNGLSNGDSSLAVHFD 61
           VVG LGIIPLFSWYHESFDKEKDITG+ IP LEMACKDFHAC WPNGLSNGD+SL+++FD
Sbjct: 159 VVGALGIIPLFSWYHESFDKEKDITGYRIPSLEMACKDFHACNWPNGLSNGDTSLSLYFD 218

Query: 62  GMNDKQMKVIKEIQNTCDHIITFSHFVPRQELCPEKRMLFYPKLPKIIGSDPLEDRIRSI 121
            +ND Q+++I+EIQ TCDHII+FSHFVPRQELCPEKRMLFYPKLPKIIGSDPLEDRIRSI
Sbjct: 219 ALNDNQIEMIQEIQKTCDHIISFSHFVPRQELCPEKRMLFYPKLPKIIGSDPLEDRIRSI 278

Query: 122 HGAEGRKSASSCHVFGHTHFCWDAVVDGIRYVQAPLAYPRERKRRMNGGEDWLPFCLYAD 181
           HG  GRK ASSCHVFGHTHFCWDAVVDGIRYVQAPLAYPRERKRRMNGGE+WLPFCLYAD
Sbjct: 279 HGDMGRKDASSCHVFGHTHFCWDAVVDGIRYVQAPLAYPRERKRRMNGGENWLPFCLYAD 338

Query: 182 KKFADRLNPCYWCDYYSANPRTPHNTELAPWVARFYKQTK 221
           KKF D+LNPC+W DYYS NPRTPH+T+LAPWVARFYK+ +
Sbjct: 339 KKFTDKLNPCFWSDYYSVNPRTPHDTKLAPWVARFYKKKQ 378