Miyakogusa Predicted Gene
- Lj2g3v0547900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0547900.1 tr|D7L1W6|D7L1W6_ARALL SWIB complex BAF60b
domain-containing protein OS=Arabidopsis lyrata subsp.
ly,28.87,5e-18,SWIB/MDM2 domain,SWIB/MDM2 domain; GYF domain,GYF; no
description,NULL; seg,NULL; Plus-3,Plus-3; SWI,CUFF.34704.1
(797 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g064260.1 | zinc finger CCCH domain protein | LC | chr3:28... 300 3e-81
Medtr3g064250.1 | zinc finger CCCH domain protein | LC | chr3:28... 293 6e-79
Medtr3g064270.1 | zinc finger CCCH domain protein | LC | chr3:28... 292 1e-78
Medtr3g064280.1 | zinc finger CCCH domain protein | LC | chr3:28... 270 3e-72
Medtr6g065790.2 | GYF domain protein | LC | chr6:24383562-243807... 265 1e-70
Medtr6g065790.1 | GYF domain protein | LC | chr6:24383562-243807... 252 1e-66
Medtr5g021500.1 | zinc finger CCCH domain protein | HC | chr5:83... 168 2e-41
Medtr3g064290.1 | SWIB/MDM2 domain; plus-3; GYF protein, putativ... 135 2e-31
Medtr3g117490.1 | zinc finger CCCH domain protein | HC | chr3:54... 129 1e-29
Medtr5g021450.1 | GYF domain protein | HC | chr5:8294173-8289658... 63 1e-09
Medtr5g021450.2 | GYF domain protein | HC | chr5:8294173-8289710... 62 2e-09
Medtr3g064300.1 | zinc ion-binding/DNA-binding protein, putative... 59 3e-08
>Medtr3g064260.1 | zinc finger CCCH domain protein | LC |
chr3:28905898-28897678 | 20130731
Length = 793
Score = 300 bits (769), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/340 (48%), Positives = 230/340 (67%), Gaps = 7/340 (2%)
Query: 35 EYNGWGSTSLIWFLDSIGKDTTNEIAQSEVANIISDYVKHKNLLHPTKKKRIVCDEKLHS 94
++ GWGS SLI FL SIG+DTT +++ +VA II Y L P KKK ++CD KL +
Sbjct: 227 DFVGWGSRSLIDFLKSIGRDTTEALSELDVAWIIIQYCHTNQLFDPKKKKIVICDAKLRN 286
Query: 95 LFGRKSISRLKISDLLESHIAKNCEESXXXXXXXXXXXENFLATCEKTPKPTSLERKCQP 154
L R+S+++ I +LLESH A N EE+ A K PK +L +P
Sbjct: 287 LLRRRSVNKNNIQNLLESHFADNFEETDGIITSSEERDNGNGAF--KFPKQGNLNSTTKP 344
Query: 155 KKPVIQKPR-SCFAAINPFNIKLVYLKKSLVEELLNDPESFENKVVGSFIRIRCDPNDYL 213
+ ++ + + S FAAI N+KLVYLK+SL+EELL PE+F+ KV+GS++R + DPNDYL
Sbjct: 345 CQNILSEEQPSVFAAIINSNMKLVYLKRSLIEELLKQPETFDGKVLGSYVRTKSDPNDYL 404
Query: 214 QKNSHQLLQVTGIKKSSGG---DGAIRLKASGFIKDISIHMLSDDNFSEAECEDLHQRVK 270
QKNSH LLQV GIK+SS + I L+ S KD+ I +SD +FSE EC+DL+QR+
Sbjct: 405 QKNSHLLLQVIGIKRSSKQADINQEILLRLSYVPKDVPISQISDVDFSEEECQDLYQRMT 464
Query: 271 GGLLKRPMVVDMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRELDEYLQRREK 330
G+LK+P V+++EQKAR LHEDITKHW+S+E+ALL++ I+ ANEKG RREL +Y+ R++K
Sbjct: 465 NGMLKKPTVLELEQKARSLHEDITKHWISREMALLQHRIDLANEKGRRRELGQYMDRKQK 524
Query: 331 LQSPDEQERLLHEIPQVIADDLELESTTPDVADK-KVEKK 369
L SP EQ RLL EIP+VI + ++ + D + K K+E+K
Sbjct: 525 LGSPSEQLRLLSEIPKVIPEMVDTNLSPEDSSRKDKLEQK 564
>Medtr3g064250.1 | zinc finger CCCH domain protein | LC |
chr3:28895175-28887869 | 20130731
Length = 795
Score = 293 bits (749), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 163/367 (44%), Positives = 238/367 (64%), Gaps = 10/367 (2%)
Query: 35 EYNGWGSTSLIWFLDSIGKDTTNEIAQSEVANIISDYVKHKNLLHPTKKKRIVCDEKLHS 94
++ GWGS SL+ FL +IG+DTT ++ +VA+IIS Y L P KKK+++CD L +
Sbjct: 230 DFVGWGSRSLVDFLKNIGEDTTKAFSEIDVASIISKYCHKNQLFDPKKKKKVICDANLET 289
Query: 95 LFGRKSISRLKISDLLESHIAKNCEESXXXXXXXXXXXENFLATCEKTPKPTSLERKCQP 154
L RKS+++ I LL SH N EE+ A K PK +L +P
Sbjct: 290 LLRRKSVNKNNIQKLLASHFVDNFEETDGIISSSEERDNGNEAF--KFPKQRNLNSTTKP 347
Query: 155 KKPVI-QKPRSCFAAINPFNIKLVYLKKSLVEELLNDPESFENKVVGSFIRIRCDPNDYL 213
+ ++ Q+ S FAAI NIKLVYL+++L++ELL PE+F+ KV+GSF+RI+ D NDYL
Sbjct: 348 CQNLLSQEQPSGFAAIINSNIKLVYLRRTLIDELLKKPETFDVKVLGSFVRIKSDRNDYL 407
Query: 214 QKNSHQLLQVTGIKKSSGGD---GAIRLKASGFIKDISIHMLSDDNFSEAECEDLHQRVK 270
QKNSH L+QV GIK+SS + I+L+ S +D+ I +SDD+FSE EC+DL++R+
Sbjct: 408 QKNSHLLVQVIGIKRSSKKEEIYQEIQLRLSYVAEDVPISKISDDDFSEEECQDLYRRMT 467
Query: 271 GGLLKRPMVVDMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRELDEYLQRREK 330
GLLK+P ++++EQKAR LHED+ KHW+S+E LL N I+RANEKGWRRE Y+ +++K
Sbjct: 468 NGLLKKPTIMELEQKARTLHEDMIKHWISRERELLRNRIDRANEKGWRREYPFYMDQKQK 527
Query: 331 LQSPDEQERLLHEIPQVIADDLELESTTPDVADKKVEKKLQDLWQPTCTKGTLVTEVPK- 389
L+SP EQ LL+EIP+VI + ++ S +P+ + K+ + + DL P G V +
Sbjct: 528 LESPSEQSHLLNEIPKVIPEMIDT-SLSPENSSKRDKLEHNDL--PELAIGETCNSVGQY 584
Query: 390 TVANGYA 396
+ +G+A
Sbjct: 585 STHDGFA 591
>Medtr3g064270.1 | zinc finger CCCH domain protein | LC |
chr3:28918653-28912043 | 20130731
Length = 789
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/388 (43%), Positives = 238/388 (61%), Gaps = 16/388 (4%)
Query: 12 IEEINGQVQXXXXXXXXXXXXXXEYNGWGSTSLIWFLDSIGKDTTNEIAQSEVANIISDY 71
++ ING+V ++ GWGS SLI FL +IG+DTT ++ +VA+II Y
Sbjct: 214 VKSINGKV---------TKDKKKDFVGWGSRSLIDFLKNIGEDTTKAFSEIDVASIIHKY 264
Query: 72 VKHKNLLHPTKKKRIVCDEKLHSLFGRKSISRLKISDLLESHIAKNCEESXXXXXXXXXX 131
+ L P KKK ++CD L +L +++I++ I LL SH A N EE+
Sbjct: 265 CQKNQLFDPKKKKMVICDANLITLLRQRTINKNNIQKLLASHFADNFEETDSNISSSEER 324
Query: 132 XENFLATCEKTPKPTSLERKCQPKKPVIQKPRSCFAAINPFNIKLVYLKKSLVEELLNDP 191
+N K S + CQ + ++ S FA I NIKLVYLK+SL+EELL P
Sbjct: 325 DDNEAFKFRKHRNLNSTIKSCQNVRS--KELPSGFAGIISSNIKLVYLKRSLIEELLKQP 382
Query: 192 ESFENKVVGSFIRIRCDPNDYLQKNSHQLLQVTGIKKSSGGD---GAIRLKASGFIKDIS 248
++F KV+GS++R + DPNDYLQKNSH LL+VTGI++SS D I L+ S KD+S
Sbjct: 383 DTFAGKVLGSYVRTKSDPNDYLQKNSHLLLEVTGIRRSSNQDEINQEILLRLSNVPKDVS 442
Query: 249 IHMLSDDNFSEAECEDLHQRVKGGLLKRPMVVDMEQKARVLHEDITKHWLSKELALLENL 308
I +SD +FSE EC+DL+QR+ G LK+P ++++EQKAR LHEDITKHW+S+E+ LL N
Sbjct: 443 ISQISDVDFSEEECQDLYQRMTNGQLKKPTLLELEQKARTLHEDITKHWISREIELLRNR 502
Query: 309 IERANEKGWRRELDEYLQRREKLQSPDEQERLLHEIPQVIADDLELESTTPDVADKKVEK 368
I+RANEKGWRRE Y+ +++KL+S EQ RLL EIP+VI +L + +P+ + +K +
Sbjct: 503 IDRANEKGWRREYPFYMDQKQKLESASEQSRLLSEIPKVIP-ELVGTNLSPEDSSRKDKF 561
Query: 369 KLQDLWQPTCTKGTLVTEVPKTVANGYA 396
+ DL Q T + + NG+A
Sbjct: 562 EQNDL-QVVAIGETCNSGGQYSTHNGFA 588
>Medtr3g064280.1 | zinc finger CCCH domain protein | LC |
chr3:28928317-28921679 | 20130731
Length = 787
Score = 270 bits (691), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/322 (48%), Positives = 212/322 (65%), Gaps = 15/322 (4%)
Query: 35 EYNGWGSTSLIWFLDSIGKDTTNEIAQSEVANIISDYVKHKNLLHPTKKKRIVCDEKLHS 94
++ GWGS SLI FL +IG+DTT ++ EVA+I++DY HK+ L KKK+I+CD L +
Sbjct: 231 DFVGWGSRSLIDFLKNIGRDTTKAFSEIEVASIVNDYC-HKHQLFDPKKKKIICDANLKT 289
Query: 95 LFGR-KSISRLKISDLLESHIAKNCEESXXXXXXXXXXXENFLATCEKTPKPTSLERKCQ 153
L R K++ + I LL SH N EE+ +N K S + CQ
Sbjct: 290 LLRRRKTVKKNNIQKLLASHFVDNFEETDSSSEERD---DNEAFKFRKHRNLNSTIKSCQ 346
Query: 154 PKKPVIQKPRSCFAAINPFNIKLVYLKKSLVEELLNDPESFENKVVGSFIRIRCDPNDYL 213
+ ++ S FAAI NIKLVYLK+SL+EELL PE+ + KV+GS++RI+ DPNDYL
Sbjct: 347 NVRS--KELPSGFAAIVSSNIKLVYLKRSLIEELLKQPET-DGKVLGSYVRIKSDPNDYL 403
Query: 214 QKNSHQLLQVTGIKKSSGGDGA---IRLKASGFIKDISIHMLSDDNFSEAECEDLHQRVK 270
QKNSH L+QV GI +SS D I L+ S KD+ I +SD +FSE EC+DL+QR+
Sbjct: 404 QKNSHLLVQVKGINRSSKQDDISQEILLRLSNVPKDVPISQISDVDFSEEECQDLYQRMT 463
Query: 271 GGLLKRPMVVDMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRE----LDEYLQ 326
GL ++P ++++E+KAR LHEDITKHW+S+E+ LL N I+RANEKGWRRE + Y+
Sbjct: 464 NGLPQKPTILELEKKARTLHEDITKHWISREIELLRNRIDRANEKGWRREYPFMIYLYMD 523
Query: 327 RREKLQSPDEQERLLHEIPQVI 348
+++KL+S EQ RLL EIP+VI
Sbjct: 524 QKQKLESAAEQSRLLSEIPKVI 545
>Medtr6g065790.2 | GYF domain protein | LC | chr6:24383562-24380716
| 20130731
Length = 411
Score = 265 bits (677), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/430 (38%), Positives = 231/430 (53%), Gaps = 50/430 (11%)
Query: 328 REKLQSPDEQERLLHEIPQVIADDLELESTTPDVADKKVEKKLQDLWQPTCTKGTLVTEV 387
R KL++P+EQERLL E PQVIA+DLE ES TPDV +KK+ Q+L Q TCTK +L TEV
Sbjct: 16 RAKLKTPEEQERLLREFPQVIAEDLESESATPDVPEKKLPTNFQELSQTTCTKVSLATEV 75
Query: 388 PKTVANGYACKVTELCKKFQGSDEQERLLHEIPQVNVDDLE-SEPTTPDVEDXXXXXXLH 446
PK A+ ++ + +D+QE L H+ PQV E S+ TP++ D +
Sbjct: 76 PKAAADDFS-------DEDDFADDQEWLFHDTPQVTTGYPEFSKSKTPEIPDKKAENNIQ 128
Query: 447 DLWQPTCTKASLVTEVPKTVANGFACNVTELFNKLQGSDEEECVLHEIPNVIADDLE-SK 505
+W+ TC AS+ EVPK V+NG P V A L+ SK
Sbjct: 129 GIWEATCMTASIEPEVPKVVSNG-------------------------PQVTAGYLDFSK 163
Query: 506 STTPDVPDKEVESNLQEVWQTTNTKTCLVTEVSKAVTDGFACKATKLDIFNLAKQEXXXX 565
S TP+VP K+ E+N+Q W+ + +V EV KAV + F + + + KQE
Sbjct: 164 SKTPEVPVKKTENNMQGFWEANCIEASVVPEVPKAVANSFVFMGKRFHVADQTKQESESP 223
Query: 566 XXXXXXXXXXEVPPFNMAMNSSMLSRISRDTVTE--HLWSGVPVQQQPAQHTNTAAYKNG 623
EVP FN+AMN++ + ISRDTVT H S + VQQQPA T +++K
Sbjct: 224 KSILSLSRPSEVPLFNIAMNNTASNGISRDTVTSTVHQRSSMSVQQQPATQT-FSSFKKD 282
Query: 624 GISQLAESN----ISKIAQRPLEKQVQPSQIQVIXXXXXXXXXXXXXXXTIKQVPADQLQ 679
G+ A+SN +K +Q +KQV+P+QIQVI + ++
Sbjct: 283 GVFMPAKSNEVTIKAKNSQGTSDKQVRPAQIQVIELSDDDDEEIEK---------SSTIK 333
Query: 680 SMMLATDTADQLQSMIWHYRDPQGNIQGPFSISHLKRWSDACYFSPDFKVWKLGQSQDQA 739
+ + S W+Y DPQGN+QGPF + LK W+D+ YFSPDFKVWK GQ+QDQ+
Sbjct: 334 PSFITPVPVENPHSSTWNYIDPQGNVQGPFPLFSLKCWNDSRYFSPDFKVWKAGQTQDQS 393
Query: 740 VLLEHVFSMF 749
VLL + S +
Sbjct: 394 VLLVDILSKY 403
>Medtr6g065790.1 | GYF domain protein | LC | chr6:24383562-24380716
| 20130731
Length = 515
Score = 252 bits (643), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/509 (34%), Positives = 245/509 (48%), Gaps = 104/509 (20%)
Query: 328 REKLQSPDEQERLLHEIPQVIADDLELESTTPDVADKKVEKKLQDLWQPTCTKGTLVTEV 387
R KL++P+EQERLL E PQVIA+DLE ES TPDV +KK+ Q+L Q TCTK +L TEV
Sbjct: 16 RAKLKTPEEQERLLREFPQVIAEDLESESATPDVPEKKLPTNFQELSQTTCTKVSLATEV 75
Query: 388 PKTVANGYACKVTELCKKFQGSDEQERLLHEIPQVNVDDLE-SEPTTPDVEDXXXXXXLH 446
PK A+ ++ + +D+QE L H+ PQV E S+ TP++ D +
Sbjct: 76 PKAAADDFS-------DEDDFADDQEWLFHDTPQVTTGYPEFSKSKTPEIPDKKAENNIQ 128
Query: 447 DLWQPTCTKASL------------------------------------------------ 458
+W+ TC AS+
Sbjct: 129 GIWEATCMTASIEPEVPKVVSNGPQVTAGYPEFSKSKTPEIPDKKAENNMQGIWEATSMT 188
Query: 459 ---VTEVPKTVANGFACNVT----------------ELFNKLQGSDEEEC----VLHEIP 495
V EVPK VA+G T + N LQG E C ++ E+P
Sbjct: 189 GSIVPEVPKVVADGIPQGTTGYPKFSKSKTPEIPDKKAENNLQGFWEATCMTGSIVPEVP 248
Query: 496 NVIADDLE---------SKSTTPDVPDKEVESNLQEVWQTTNTKTCLVTEVSKAVTDGFA 546
V+A+ + SKS TP+VP K+ E+N+Q W+ + +V EV KAV + F
Sbjct: 249 KVVANGIPQVTTGYLDFSKSKTPEVPVKKTENNMQGFWEANCIEASVVPEVPKAVANSFV 308
Query: 547 CKATKLDIFNLAKQEXXXXXXXXXXXXXXEVPPFNMAMNSSMLSRISRDTVTE--HLWSG 604
+ + + KQE EVP FN+AMN++ + ISRDTVT H S
Sbjct: 309 FMGKRFHVADQTKQESESPKSILSLSRPSEVPLFNIAMNNTASNGISRDTVTSTVHQRSS 368
Query: 605 VPVQQQPAQHTNTAAYKNGGISQLAESN----ISKIAQRPLEKQVQPSQIQVIXXXXXXX 660
+ VQQQPA T +++K G+ A+SN +K +Q +KQV+P+QIQVI
Sbjct: 369 MSVQQQPATQT-FSSFKKDGVFMPAKSNEVTIKAKNSQGTSDKQVRPAQIQVIELSDDDD 427
Query: 661 XXXXXXXXTIKQVPADQLQSMMLATDTADQLQSMIWHYRDPQGNIQGPFSISHLKRWSDA 720
+ ++ + + S W+Y DPQGN+QGPF + LK W+D+
Sbjct: 428 EEIEK---------SSTIKPSFITPVPVENPHSSTWNYIDPQGNVQGPFPLFSLKCWNDS 478
Query: 721 CYFSPDFKVWKLGQSQDQAVLLEHVFSMF 749
YFSPDFKVWK GQ+QDQ+VLL + S +
Sbjct: 479 RYFSPDFKVWKAGQTQDQSVLLVDILSKY 507
>Medtr5g021500.1 | zinc finger CCCH domain protein | HC |
chr5:8311147-8303973 | 20130731
Length = 1265
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 173/327 (52%), Gaps = 16/327 (4%)
Query: 39 WGSTSLIWFLDSIGKDTTNEIAQSEVANIISDYVKHKNLLHPTKKKRIVCDEKLHSLFGR 98
W S L+ F+ + T+ ++Q +V N++ +YVK NL P +K IVCD +L +LFG+
Sbjct: 303 WASKELLEFVSHMKNGDTSILSQFDVQNLLLEYVKKNNLRDPQQKSLIVCDSRLVNLFGK 362
Query: 99 KSISRLKISDLLESH--IAKNCEESXXXXXXXXXXXENFLATCEKTPKPTSL--ERKCQP 154
+ +++ LLE H I +N N + + + L +++C
Sbjct: 363 ARLGYIEMLMLLEPHFLIKENTPAENNFGAGISDAVANGKEAIDSNNRQSVLVNDKRCTS 422
Query: 155 KK---PVIQKPRSCFAAINPFNIKLVYLKKSLVEELLNDPESFENKVVGSFIRIRCDPND 211
KK PV Q + +A+IN NI L+YL++SL+E L +D ES KVVGSF+RIR D
Sbjct: 423 KKADMPVPQNNQDAYASINAHNINLIYLRRSLMESLTDDSESIHEKVVGSFVRIRISSGD 482
Query: 212 YLQKNSHQLLQVTGIKK--------SSGGDGAIRLKASGFIKDISIHMLSDDNFSEAECE 263
Q + ++L+QV G K + D + + + ISI +S+ FSE EC+
Sbjct: 483 QKQ-DMYRLVQVVGTSKVAEPYKIGTRTTDIKLEILNLNRKEVISIDEISNQEFSEDECK 541
Query: 264 DLHQRVKGGLLKRPMVVDMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRELDE 323
L Q +K GL KR V ++ KA E L E L NL +RA+EKG R+EL E
Sbjct: 542 RLRQSIKYGLSKRLTVGEILNKALTFQEIRVNDLLEAEKLRLNNLRDRASEKGHRKELKE 601
Query: 324 YLQRREKLQSPDEQERLLHEIPQVIAD 350
+++ + L SP E++R LHE+P V +D
Sbjct: 602 CVEKLQLLNSPVERQRRLHEVPDVHSD 628
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 675 ADQLQSMMLATDTA----DQLQSMIWHYRDPQGNIQGPFSISHLKRWSDACYFSPDFKVW 730
A + S +++T +A D + WHY+DP G +QGPFS+ L +W+ + +F PD KVW
Sbjct: 714 AVDISSPLISTGSAQPFDDFMNDRSWHYQDPSGKVQGPFSMLQLYKWNASGHFPPDLKVW 773
Query: 731 KLGQSQDQAVLL 742
++ + Q ++LL
Sbjct: 774 RVDEKQANSILL 785
>Medtr3g064290.1 | SWIB/MDM2 domain; plus-3; GYF protein, putative |
HC | chr3:28934163-28930589 | 20130731
Length = 410
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 102/164 (62%), Gaps = 15/164 (9%)
Query: 221 LQVTGIKKSSGGDGAIRLKASGFIKDISIHMLSDDNFSEAECEDLHQRVKGGLLKRPMVV 280
+ +TGI +S+ + I L+ S KD+ I +SDD+FSE EC+DL+QR+ GLLK+P ++
Sbjct: 46 IHITGINRSNKTNQEILLQLSNVPKDVPISKISDDDFSEEECQDLYQRMANGLLKKPTIL 105
Query: 281 DMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRELDEYLQRREKLQSPDEQERL 340
++EQKAR LHEDITKHW+S+E+ALL N I D Y+ R++KL+SP EQ RL
Sbjct: 106 ELEQKARTLHEDITKHWISREIALLRNRI------------DLYMDRKQKLESPSEQSRL 153
Query: 341 LHEIPQVIAD--DLELESTTPDVADKKVEKKLQDL-WQPTCTKG 381
L EIP+VI + D L DK + L DL TC G
Sbjct: 154 LGEIPEVIPEMVDTNLSPEKSSRKDKVEQIDLPDLVIGETCNSG 197
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 695 IWHYRDPQGN-IQGPFSISHLKRWSDACYFSP-DFKVWKLGQSQDQAVLLEHVFSMF 749
IWH +G +GPFS+S LKRWS++ SP ++KVWK G+S+ +A+LL S F
Sbjct: 345 IWHCSGIRGGGTKGPFSMSVLKRWSESATSSPLNYKVWKTGESEREAILLRDALSSF 401
>Medtr3g117490.1 | zinc finger CCCH domain protein | HC |
chr3:54988847-54999032 | 20130731
Length = 1386
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 167/338 (49%), Gaps = 39/338 (11%)
Query: 59 IAQSEVANIISDYVKHKNLLHPTKKKRIVCDEKLHSLFGRKSISRLKISDLLESHI---- 114
+ Q +V ++ +Y+K L P +K +IVCD +L +LFG+ + ++ LLESH
Sbjct: 463 LPQFDVHALLLEYIKINKLRDPRRKSQIVCDARLQNLFGKPRVGHFEMLKLLESHFLLKE 522
Query: 115 ---AKNCEESXXXXXXXXXXXENFLATCEKTPKPTSLERKCQPKKPVIQKPRSCFAAINP 171
A++ + S + T K K + + + + +Q +AAI+
Sbjct: 523 DSQAEDHQGSVVDTEVSHLEGDGDDDTYIKVGKDKKRKSRKKGDERGLQSNIDEYAAIDN 582
Query: 172 FNIKLVYLKKSLVEELLNDPESFENKVVGSFIRIRCDPNDYLQKNSHQLLQVTGIKKSSG 231
NI L+YL+++LVE+LL D + F + VVGSF+RIR + Q + ++L+QV G K+
Sbjct: 583 HNINLIYLRRNLVEDLLEDTDQFHDSVVGSFVRIRISGSGQKQ-DLYRLVQVAGTCKT-- 639
Query: 232 GDGAIRLKASGFIKDI-------------SIHMLSDDNFSEAECEDLHQRVKGGLLKRPM 278
A K + DI S+ ++S+ F+E EC+ L Q +K GL+ R
Sbjct: 640 ---AEPYKVGKKMTDILLEILNLNKTEIVSMDIISNQEFTEDECKRLRQSIKCGLINRMT 696
Query: 279 VVDMEQKARVLHEDITKHWLSKELALLENLIERANEKGWRRELDEYLQRREKLQSPDEQE 338
V D++ KA L K WL E+ L +L +RA ++ + L++P+E++
Sbjct: 697 VGDIQDKALTLQAVRVKDWLETEIVRLSHLRDRA-------------KKLQLLKTPEERQ 743
Query: 339 RLLHEIPQVIADDLELESTTPDVADKKVEKKLQDLWQP 376
R L EIP++ D S D D+ +K+ ++ +P
Sbjct: 744 RRLEEIPEIHVDPKMDPSYESDEGDEMEDKRQENFMRP 781
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 695 IWHYRDPQGNIQGPFSISHLKRWSDACYFSPDFKVWKLGQSQDQAVLLEHVFS 747
+WHY+DP G +QGPFS+ L +W++ YF D ++WK + QD+++LL V +
Sbjct: 917 MWHYQDPSGKVQGPFSMVQLSKWNNTGYFPADLRIWKTSERQDESILLRDVLA 969
>Medtr5g021450.1 | GYF domain protein | HC | chr5:8294173-8289658 |
20130731
Length = 707
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 675 ADQLQSMMLATDTADQLQSMIWHYRDPQGNIQGPFSISHLKRWSDACYFSPDFKVWKLGQ 734
A+ + S++ +T ++ +WHY+DP G + GPFS+S L + YFSPD +VW++ +
Sbjct: 318 AEDISSLLHSTG----MEQPVWHYQDPTGKVHGPFSMSLLCKLKGTEYFSPDLRVWRVDE 373
Query: 735 SQDQAVLLEHVFS 747
Q+ ++LL S
Sbjct: 374 KQENSILLSDALS 386
>Medtr5g021450.2 | GYF domain protein | HC | chr5:8294173-8289710 |
20130731
Length = 680
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 675 ADQLQSMMLATDTADQLQSMIWHYRDPQGNIQGPFSISHLKRWSDACYFSPDFKVWKLGQ 734
A+ + S++ +T ++ +WHY+DP G + GPFS+S L + YFSPD +VW++ +
Sbjct: 291 AEDISSLLHSTG----MEQPVWHYQDPTGKVHGPFSMSLLCKLKGTEYFSPDLRVWRVDE 346
Query: 735 SQDQAVLLEHVFS 747
Q+ ++LL S
Sbjct: 347 KQENSILLSDALS 359
>Medtr3g064300.1 | zinc ion-binding/DNA-binding protein, putative |
LC | chr3:28939249-28935080 | 20130731
Length = 279
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 141 KTPKPTSLE---RKCQPKKPVIQKPRSCFAAINPFNIKLVYLKKSLVEELLNDPESFENK 197
K PK +L + CQ V +K S +AAI N+KLVYLK++L+EEL PE+F++K
Sbjct: 209 KFPKQRNLNSATKSCQS--AVSEKLPSGYAAIISSNLKLVYLKRTLIEELRKQPETFDDK 266
Query: 198 VVGSFIRIRCDP 209
V+G F+R + DP
Sbjct: 267 VLGCFVRTKTDP 278