Miyakogusa Predicted Gene

Lj2g3v0533480.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0533480.2 Non Characterized Hit- tr|F6HGJ5|F6HGJ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,68.06,1e-16,seg,NULL,CUFF.34672.2
         (72 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077100.1 | hypothetical protein | HC | chr1:34405679-3440...    64   2e-11

>Medtr1g077100.1 | hypothetical protein | HC |
          chr1:34405679-34404340 | 20130731
          Length = 129

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/55 (67%), Positives = 40/55 (72%), Gaps = 5/55 (9%)

Query: 20 LLDGHKRRAGV--PSGSNXXXXXXXXATGSAIVDAMMEIAAASKMRASAIVKNED 72
          +LDGHKRR  V  PSGS         ATG  IVDAM+EIAAASKMRASAI+KNED
Sbjct: 18 MLDGHKRRPTVVVPSGSGGRKRK---ATGDTIVDAMLEIAAASKMRASAILKNED 69