Miyakogusa Predicted Gene

Lj2g3v0523460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0523460.1 Non Characterized Hit- tr|B9FX69|B9FX69_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.19,0.0000000000001,seg,NULL,CUFF.34668.1
         (434 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC | chr6...   343   1e-94
Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC | chr6...   343   1e-94
Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC | chr1...   338   6e-93
Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC | chr1...   338   6e-93

>Medtr6g065070.2 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 215/405 (53%), Positives = 256/405 (63%), Gaps = 35/405 (8%)

Query: 37  DHPIPNDAGQDSRVAKTPSAEARDTDKKS-IHSVNQMPLSS-----DHPIGTQNKIESSD 90
           DH +P + GQDSRVAKT   E RD D++S +HSV +MPLSS     DHPIGT N+IES D
Sbjct: 2   DHHVPREIGQDSRVAKTFRVEGRDADRRSPLHSVYRMPLSSNDSQADHPIGTGNRIESRD 61

Query: 91  LKGNRDLQFENRDTEKKELHGESRGDSHTAKSEKDVCVEGQGNDNNKDIRYDRDNHNDTK 150
           LK NRD+                       +SEKDVC+E +G+D+NK  R++RD+HNDTK
Sbjct: 62  LKDNRDI-----------------------RSEKDVCLESRGDDSNKGTRHERDSHNDTK 98

Query: 151 NATKTEKYGSDLLSSPSNRKESKKLKGKRHFDSPSGRLDSGHTSRGNTPAEVGKKNSTAE 210
              KT+K    L+SSP N K+SK  +GKR+ DSP G LDS H S GNTP EVGK+N T +
Sbjct: 99  GDIKTDKVTFGLVSSPLNWKDSKDFRGKRYGDSPGGSLDSRHMSHGNTPTEVGKENPTTK 158

Query: 211 ERDYSEAGEAVEKNKIDSKSEDGFKDRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXX 270
           +RD  EA E V ++KIDSKSED FKDR+R D KH+ WGDKEKE                 
Sbjct: 159 DRDSLEAHETVGESKIDSKSEDRFKDRKRIDGKHQGWGDKEKERSDRRNSTQVNNNIGEN 218

Query: 271 KESPNEDRGAXXXXXXXXXXXXXXXNSKQREKAHTKRALWNEMEKEVSNNEKELGDG--K 328
           KES  ED+ A                SK+    H KR  WN MEKEVS NEKE+ DG  K
Sbjct: 219 KESAKEDQAAEKLEKEKKDIPKNREISKE----HMKRESWNGMEKEVSYNEKEVADGSVK 274

Query: 329 TSEQETLLPDQKKQKVADSSKNVDGEGRESRKERDADIEGDQPDKHIKFDKKSEDGCADG 388
             + ET+LP+QKK K  DS K VDGE R+ RKERD D+EGD+PDK  K +K+SEDG A  
Sbjct: 275 IPKHETVLPEQKKHKDVDSGKTVDGETRDRRKERDNDLEGDRPDKRFKSEKQSEDGFAGE 334

Query: 389 EETEEKEREVHNYNVQRRKRIQRSRGSPQVANREARFASDAQDNE 433
           EET EKE E H+ NVQ RKRIQRSR SP VAN E+RF   AQDNE
Sbjct: 335 EETGEKESEDHSCNVQHRKRIQRSRASPLVANLESRFGPHAQDNE 379


>Medtr6g065070.1 | histone deacetylation protein Rxt3 | HC |
           chr6:24088971-24097484 | 20130731
          Length = 739

 Score =  343 bits (881), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 215/405 (53%), Positives = 256/405 (63%), Gaps = 35/405 (8%)

Query: 37  DHPIPNDAGQDSRVAKTPSAEARDTDKKS-IHSVNQMPLSS-----DHPIGTQNKIESSD 90
           DH +P + GQDSRVAKT   E RD D++S +HSV +MPLSS     DHPIGT N+IES D
Sbjct: 2   DHHVPREIGQDSRVAKTFRVEGRDADRRSPLHSVYRMPLSSNDSQADHPIGTGNRIESRD 61

Query: 91  LKGNRDLQFENRDTEKKELHGESRGDSHTAKSEKDVCVEGQGNDNNKDIRYDRDNHNDTK 150
           LK NRD+                       +SEKDVC+E +G+D+NK  R++RD+HNDTK
Sbjct: 62  LKDNRDI-----------------------RSEKDVCLESRGDDSNKGTRHERDSHNDTK 98

Query: 151 NATKTEKYGSDLLSSPSNRKESKKLKGKRHFDSPSGRLDSGHTSRGNTPAEVGKKNSTAE 210
              KT+K    L+SSP N K+SK  +GKR+ DSP G LDS H S GNTP EVGK+N T +
Sbjct: 99  GDIKTDKVTFGLVSSPLNWKDSKDFRGKRYGDSPGGSLDSRHMSHGNTPTEVGKENPTTK 158

Query: 211 ERDYSEAGEAVEKNKIDSKSEDGFKDRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXX 270
           +RD  EA E V ++KIDSKSED FKDR+R D KH+ WGDKEKE                 
Sbjct: 159 DRDSLEAHETVGESKIDSKSEDRFKDRKRIDGKHQGWGDKEKERSDRRNSTQVNNNIGEN 218

Query: 271 KESPNEDRGAXXXXXXXXXXXXXXXNSKQREKAHTKRALWNEMEKEVSNNEKELGDG--K 328
           KES  ED+ A                SK+    H KR  WN MEKEVS NEKE+ DG  K
Sbjct: 219 KESAKEDQAAEKLEKEKKDIPKNREISKE----HMKRESWNGMEKEVSYNEKEVADGSVK 274

Query: 329 TSEQETLLPDQKKQKVADSSKNVDGEGRESRKERDADIEGDQPDKHIKFDKKSEDGCADG 388
             + ET+LP+QKK K  DS K VDGE R+ RKERD D+EGD+PDK  K +K+SEDG A  
Sbjct: 275 IPKHETVLPEQKKHKDVDSGKTVDGETRDRRKERDNDLEGDRPDKRFKSEKQSEDGFAGE 334

Query: 389 EETEEKEREVHNYNVQRRKRIQRSRGSPQVANREARFASDAQDNE 433
           EET EKE E H+ NVQ RKRIQRSR SP VAN E+RF   AQDNE
Sbjct: 335 EETGEKESEDHSCNVQHRKRIQRSRASPLVANLESRFGPHAQDNE 379


>Medtr1g077090.2 | histone deacetylation protein Rxt3 | HC |
           chr1:34396265-34403627 | 20130731
          Length = 821

 Score =  338 bits (867), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 234/475 (49%), Positives = 301/475 (63%), Gaps = 56/475 (11%)

Query: 1   MSAIPKRSHEETDHPSSKNPHQDSGTYSKLG-SSLSSDHPIPNDAGQDSRVAKTPSAEAR 59
           MS  PK+SHEE+ HPSSK+PH+D+G Y KL  SS+S+++ +  D GQDSRV K P    R
Sbjct: 1   MSGTPKKSHEESVHPSSKHPHEDAGAYPKLAPSSVSNEYHMSYDIGQDSRVVKVP----R 56

Query: 60  DTDKKS-IHSVNQMPLSS-----DHPIGTQNKIESSDLKGNRDLQFENRDT--EKKELHG 111
           D +++S +HSV +MP SS     +HP+G + ++ES + K +RD++FENRDT  EKKE+ G
Sbjct: 57  DVERRSPLHSVYRMPSSSSDPHAEHPVGPEKRLESRESKDSRDIRFENRDTKTEKKEMFG 116

Query: 112 ESRGDSHTAKSEKDVCVEGQGNDNNKDIRYDRDNHNDTKNATKTEKYGSDLLSSPS---- 167
           E R D  +AKSEKD  VEG+G+DN KD+R+DRD+HND+K  TKTEK   D  ++ S    
Sbjct: 117 EVRKDPQSAKSEKDAHVEGRGDDN-KDVRHDRDSHNDSKGDTKTEK---DSFNAASGLHL 172

Query: 168 NRKESKKL-KGKRHFDSPSGRLDSGHTSRGNTPA--EVGKKNSTAEERDYS-EAGEAVEK 223
           + KES+K  + K + D P   L+    SRGNT A  EVGK++S+AE+R+Y  EA EAV +
Sbjct: 173 DWKESEKYHRAKIYSDPPGASLEPWPMSRGNTQASLEVGKESSSAEQREYGGEAREAVGE 232

Query: 224 NKIDSKSEDGFK--DRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXXKESPN------ 275
           NKIDSK +D  K  DR+RK+VKHRDWG+KEKE                 KES N      
Sbjct: 233 NKIDSKGDDRSKEKDRKRKEVKHRDWGEKEKERIDRRNNIQVSNTGSDWKESVNDRRNNV 292

Query: 276 --------------EDRGAXXXXXXXXXXXXXXXNSKQREKAHTKRALWNEMEKEVSNNE 321
                         +DR                 N K++EK   KR  WN  EK+VSNNE
Sbjct: 293 QVSNTIGDGKEPLKQDRDVERWEREKKDLPKEKENLKEKEKDQMKRESWNGAEKDVSNNE 352

Query: 322 KELGDG--KTSEQETLLPDQKKQKVADSSKNVDGEGRESRKERDADIEGDQPDKHIK-FD 378
           KE  DG  K  EQET+LP+QKKQK      +VD E ++ RKER+AD+ GD+ DK  + FD
Sbjct: 353 KEPVDGSAKVPEQETVLPEQKKQK------DVDREAKDKRKEREADLVGDRSDKRSRGFD 406

Query: 379 KKSEDGCADGEETEEKEREVHNYNVQRRKRIQRSRGSPQVANREARFASDAQDNE 433
           K+S+DGCADG+   EKE EV+NY+ Q RKRIQRSRGSPQV NRE RF    QDNE
Sbjct: 407 KESDDGCADGQGAIEKESEVYNYSGQHRKRIQRSRGSPQVPNREPRFRPRTQDNE 461


>Medtr1g077090.1 | histone deacetylation protein Rxt3 | HC |
           chr1:34396245-34403627 | 20130731
          Length = 821

 Score =  338 bits (867), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 234/475 (49%), Positives = 301/475 (63%), Gaps = 56/475 (11%)

Query: 1   MSAIPKRSHEETDHPSSKNPHQDSGTYSKLG-SSLSSDHPIPNDAGQDSRVAKTPSAEAR 59
           MS  PK+SHEE+ HPSSK+PH+D+G Y KL  SS+S+++ +  D GQDSRV K P    R
Sbjct: 1   MSGTPKKSHEESVHPSSKHPHEDAGAYPKLAPSSVSNEYHMSYDIGQDSRVVKVP----R 56

Query: 60  DTDKKS-IHSVNQMPLSS-----DHPIGTQNKIESSDLKGNRDLQFENRDT--EKKELHG 111
           D +++S +HSV +MP SS     +HP+G + ++ES + K +RD++FENRDT  EKKE+ G
Sbjct: 57  DVERRSPLHSVYRMPSSSSDPHAEHPVGPEKRLESRESKDSRDIRFENRDTKTEKKEMFG 116

Query: 112 ESRGDSHTAKSEKDVCVEGQGNDNNKDIRYDRDNHNDTKNATKTEKYGSDLLSSPS---- 167
           E R D  +AKSEKD  VEG+G+DN KD+R+DRD+HND+K  TKTEK   D  ++ S    
Sbjct: 117 EVRKDPQSAKSEKDAHVEGRGDDN-KDVRHDRDSHNDSKGDTKTEK---DSFNAASGLHL 172

Query: 168 NRKESKKL-KGKRHFDSPSGRLDSGHTSRGNTPA--EVGKKNSTAEERDYS-EAGEAVEK 223
           + KES+K  + K + D P   L+    SRGNT A  EVGK++S+AE+R+Y  EA EAV +
Sbjct: 173 DWKESEKYHRAKIYSDPPGASLEPWPMSRGNTQASLEVGKESSSAEQREYGGEAREAVGE 232

Query: 224 NKIDSKSEDGFK--DRERKDVKHRDWGDKEKEXXXXXXXXXXXXXXXXXKESPN------ 275
           NKIDSK +D  K  DR+RK+VKHRDWG+KEKE                 KES N      
Sbjct: 233 NKIDSKGDDRSKEKDRKRKEVKHRDWGEKEKERIDRRNNIQVSNTGSDWKESVNDRRNNV 292

Query: 276 --------------EDRGAXXXXXXXXXXXXXXXNSKQREKAHTKRALWNEMEKEVSNNE 321
                         +DR                 N K++EK   KR  WN  EK+VSNNE
Sbjct: 293 QVSNTIGDGKEPLKQDRDVERWEREKKDLPKEKENLKEKEKDQMKRESWNGAEKDVSNNE 352

Query: 322 KELGDG--KTSEQETLLPDQKKQKVADSSKNVDGEGRESRKERDADIEGDQPDKHIK-FD 378
           KE  DG  K  EQET+LP+QKKQK      +VD E ++ RKER+AD+ GD+ DK  + FD
Sbjct: 353 KEPVDGSAKVPEQETVLPEQKKQK------DVDREAKDKRKEREADLVGDRSDKRSRGFD 406

Query: 379 KKSEDGCADGEETEEKEREVHNYNVQRRKRIQRSRGSPQVANREARFASDAQDNE 433
           K+S+DGCADG+   EKE EV+NY+ Q RKRIQRSRGSPQV NRE RF    QDNE
Sbjct: 407 KESDDGCADGQGAIEKESEVYNYSGQHRKRIQRSRGSPQVPNREPRFRPRTQDNE 461