Miyakogusa Predicted Gene

Lj2g3v0523450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0523450.1 tr|G7KHS6|G7KHS6_MEDTR 4,5-DOPA dioxygenase
extradiol-like protein OS=Medicago truncatula
GN=MTR_6g0,72.41,1e-16,LigB,Extradiol ring-cleavage dioxygenase, class
III enzyme, subunit B; LigB subunit of an aromatic-r,CUFF.34670.1
         (267 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g064960.1 | 4,5-DOPA dioxygenase extradiol-like protein | ...   476   e-134
Medtr1g077030.1 | 4,5-DOPA dioxygenase extradiol-like protein | ...   415   e-116
Medtr6g036660.1 | aromatic ring-opening dioxygenase, catalytic p...   190   1e-48

>Medtr6g064960.1 | 4,5-DOPA dioxygenase extradiol-like protein | HC
           | chr6:24061806-24058028 | 20130731
          Length = 266

 Score =  476 bits (1225), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 230/265 (86%), Positives = 247/265 (93%), Gaps = 1/265 (0%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           MALKDTFYISHGSPTLSID+S+ ARKFLQSWKK+VF  RP SILVISGHWDT VPTVNV+
Sbjct: 1   MALKDTFYISHGSPTLSIDDSIEARKFLQSWKKDVFEERPKSILVISGHWDTTVPTVNVI 60

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWV 120
            +TNDTI+DFYGFPKPMYQLKYPAPGAP LAKRVKELL + GF RVDEDKKRGLDHGAWV
Sbjct: 61  QTTNDTIHDFYGFPKPMYQLKYPAPGAPELAKRVKELLNKSGFDRVDEDKKRGLDHGAWV 120

Query: 121 PLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERH 180
           PL+LMYPEADIPVCQLSVQS+LDGT+HYN+GKALAPLKDEGVLI+GSGSAVHNL  L   
Sbjct: 121 PLMLMYPEADIPVCQLSVQSDLDGTYHYNLGKALAPLKDEGVLIMGSGSAVHNLGTLNPR 180

Query: 181 ATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGEN 240
           A V APWA+EFDNWLK+ALL+GRYEDVNHYEQKAPHAKKAHP PDHFYPLHVAIGAAGEN
Sbjct: 181 AGV-APWALEFDNWLKDALLDGRYEDVNHYEQKAPHAKKAHPHPDHFYPLHVAIGAAGEN 239

Query: 241 SKAKLIHSSIDLGSLSYASYQFTSD 265
           SKAKLIHSSI+LG+LSYASYQFTSD
Sbjct: 240 SKAKLIHSSINLGTLSYASYQFTSD 264


>Medtr1g077030.1 | 4,5-DOPA dioxygenase extradiol-like protein | HC
           | chr1:34375514-34373672 | 20130731
          Length = 265

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 197/264 (74%), Positives = 233/264 (88%), Gaps = 2/264 (0%)

Query: 1   MALKDTFYISHGSPTLSIDESLVARKFLQSWKKEVFPPRPTSILVISGHWDTAVPTVNVV 60
           MALK+TFYISHGSPTL+IDE++ A KFL SWK EVFP RP++ILVISGHWDT+VPTVNVV
Sbjct: 1   MALKETFYISHGSPTLAIDETIPAWKFLTSWK-EVFPERPSAILVISGHWDTSVPTVNVV 59

Query: 61  DSTNDTIYDFYGFPKPMYQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWV 120
           +  N+TI+DF GFP+ MY+LKYPAPGAP LAKRVKEL++  G SRVDEDKKRGLDHG WV
Sbjct: 60  NH-NETIHDFGGFPRSMYKLKYPAPGAPKLAKRVKELIEASGLSRVDEDKKRGLDHGTWV 118

Query: 121 PLLLMYPEADIPVCQLSVQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERH 180
           PL+LMYPEADIPVCQLSV SN +GT+HYN+GKA+APLKDEGVLI+GSGSA HN+RA+   
Sbjct: 119 PLMLMYPEADIPVCQLSVSSNRNGTYHYNLGKAIAPLKDEGVLIIGSGSATHNMRAIGPR 178

Query: 181 ATVAAPWAVEFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGEN 240
            +   PWA+ FD+WLKE+L+EGRYED+NHYE+KAP+AK AHPWPDHF+PLHVA+GAAGEN
Sbjct: 179 ESPPPPWALAFDSWLKESLVEGRYEDINHYEEKAPYAKVAHPWPDHFFPLHVAMGAAGEN 238

Query: 241 SKAKLIHSSIDLGSLSYASYQFTS 264
           SKAK+IH S D G+ SYAS+ FT+
Sbjct: 239 SKAKVIHESWDGGAFSYASFGFTA 262


>Medtr6g036660.1 | aromatic ring-opening dioxygenase, catalytic
           protein | HC | chr6:12850773-12851611 | 20130731
          Length = 169

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 101/188 (53%), Positives = 128/188 (68%), Gaps = 31/188 (16%)

Query: 78  YQLKYPAPGAPHLAKRVKELLKEGGFSRVDEDKKRGLDHGAWVPLLLMYPEADIPVCQLS 137
           +QLKYPAPGAP LAKRVKE ++  G S                              QLS
Sbjct: 9   WQLKYPAPGAPKLAKRVKEQIEASGLS------------------------------QLS 38

Query: 138 VQSNLDGTHHYNIGKALAPLKDEGVLIVGSGSAVHNLRALERHATVAAPWAVEFDNWLKE 197
           + S+ +GT+HYN+GKALAPLKDE VLI+GS +A HN   +    +   PWAVEF +WLK 
Sbjct: 39  ISSDRNGTYHYNLGKALAPLKDESVLILGSENATHNKTVIAPRESPPFPWAVEFMSWLKN 98

Query: 198 ALLEGRYEDVNHYEQKAPHAKKAHP-WPDHFYPLHVAIGAAGENSKAKLIHSSIDLGSLS 256
           +L+EG+Y++VNHYE+KAP+AK AHP  P+H +PL+VA+GAAGENSKAK+IH S DLGSLS
Sbjct: 99  SLIEGKYDEVNHYEEKAPYAKLAHPHRPEHMFPLNVAMGAAGENSKAKVIHDSWDLGSLS 158

Query: 257 YASYQFTS 264
           Y S+ FT+
Sbjct: 159 YVSFGFTA 166