Miyakogusa Predicted Gene

Lj2g3v0461500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0461500.1 Non Characterized Hit- tr|I1MQ40|I1MQ40_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13094
PE,89.18,0,HMG-CoA-S_euk: hydroxymethylglutaryl-CoA
synthase,Hydroxymethylglutaryl-CoA synthase, eukaryotic;
SU,CUFF.34600.1
         (459 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g089570.1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase...   855   0.0  
Medtr5g011040.1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase...   763   0.0  
Medtr5g011040.2 | 3-hydroxy-3-methylglutaryl coenzyme A synthase...   684   0.0  

>Medtr6g089570.1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
           HC | chr6:22746750-22740317 | 20130731
          Length = 459

 Score =  855 bits (2208), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/456 (87%), Positives = 429/456 (94%)

Query: 3   SSSHPNNVGILAIDIYFPPTCVQQGALEEHDGVSKGKYTIGLGQDCMAFCTDVEDVISMS 62
           +SSHPNNVGILAIDIYFPPTCVQQ ALE HDGVSKGKYTIGLGQDCMAFCT+VED+ISMS
Sbjct: 2   ASSHPNNVGILAIDIYFPPTCVQQEALEAHDGVSKGKYTIGLGQDCMAFCTEVEDIISMS 61

Query: 63  LTVVTSLLEKYNVDSKQIGRLEVGSETVIDKSKSIKTFLMQVFEESGNADIEGVDSTNAC 122
           +TVV+SLLEKYN+D K+IGRLEVGSET+IDKSKSIKTFLMQ+FE+SGN DIEGVDSTNAC
Sbjct: 62  MTVVSSLLEKYNIDPKKIGRLEVGSETMIDKSKSIKTFLMQIFEDSGNTDIEGVDSTNAC 121

Query: 123 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVF 182
           YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAML+GPDAPI F
Sbjct: 122 YGGTAALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLVGPDAPIAF 181

Query: 183 ESKLRGSHMSHVYDFYKPNLASEYPVVDGMLSQTCYLMALDSCYRLLCEKFEKLEGRPFS 242
           ESKLRGSHMSH YDFYKPNLASEYPVVDG LSQTCYLMALDSCYR+ CEKFEK EG+ FS
Sbjct: 182 ESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYRVFCEKFEKSEGKHFS 241

Query: 243 ISDSDYFVFHSPYNKLVQKSFGRLYFNDFQRNPSFVDEVSRNALAPFASLSGDESYRSRD 302
           ++DSDYFVFHSPYNKLVQKSFGRLYFNDF RNPSFVDEVSR ALAP+ASL+GDESY+SRD
Sbjct: 242 MADSDYFVFHSPYNKLVQKSFGRLYFNDFLRNPSFVDEVSRQALAPYASLTGDESYQSRD 301

Query: 303 LEKANQQAAKHVYDAKVQPGTLIPKQVGNMYTASLYSAFASLLHNKHDSLVGKRVVMFSY 362
           LEKANQQAAK +YDAKVQP TLIPKQVGNMYTASLY+AFASLLHNKHDSLVGKRVVMFSY
Sbjct: 302 LEKANQQAAKKIYDAKVQPSTLIPKQVGNMYTASLYAAFASLLHNKHDSLVGKRVVMFSY 361

Query: 363 GSGLTATMFSFRLQEGQQPFNLSNIVKLMNVSDKLKQRIEVTPEKFVETLKIMEQRYGAK 422
           GSGLT+TMFSFRLQEGQ PFNLSNIV +MNVS KLKQRIE+ PEKFVE  KIME  YG K
Sbjct: 362 GSGLTSTMFSFRLQEGQHPFNLSNIVTVMNVSGKLKQRIELPPEKFVENTKIMEHHYGGK 421

Query: 423 DFVTSMDCSYLHPGTFYLTKVDSMYRRFYSKKDTMS 458
           +FVT  DC+YL PGTF+LTKVDSMYRRFY+KKD ++
Sbjct: 422 EFVTGQDCNYLLPGTFFLTKVDSMYRRFYAKKDVVT 457


>Medtr5g011040.1 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
           HC | chr5:3104283-3109011 | 20130731
          Length = 471

 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/451 (78%), Positives = 404/451 (89%)

Query: 8   NNVGILAIDIYFPPTCVQQGALEEHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVT 67
           NNVGILA+DIYFPP CVQQ ALE HDG SKGKYTIGLGQDCM+FC+DVEDVISMSLTVV+
Sbjct: 7   NNVGILALDIYFPPNCVQQEALEAHDGASKGKYTIGLGQDCMSFCSDVEDVISMSLTVVS 66

Query: 68  SLLEKYNVDSKQIGRLEVGSETVIDKSKSIKTFLMQVFEESGNADIEGVDSTNACYGGTA 127
           +LL+KY +D KQIGRLEVGSETVIDKSKSIK+FLMQ+FE+ GN DIEGVDSTNACYGGTA
Sbjct: 67  TLLQKYEIDPKQIGRLEVGSETVIDKSKSIKSFLMQIFEKYGNTDIEGVDSTNACYGGTA 126

Query: 128 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLR 187
           ALFNCVNWVES+SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPI FESKLR
Sbjct: 127 ALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPISFESKLR 186

Query: 188 GSHMSHVYDFYKPNLASEYPVVDGMLSQTCYLMALDSCYRLLCEKFEKLEGRPFSISDSD 247
           GSHM+HVYDFYKP+LASEYPVVDG LSQTCYLMALD+C++  C+K+EK EG+ FS+SD+D
Sbjct: 187 GSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDTCFKNFCQKYEKHEGKQFSLSDAD 246

Query: 248 YFVFHSPYNKLVQKSFGRLYFNDFQRNPSFVDEVSRNALAPFASLSGDESYRSRDLEKAN 307
           YFVFHSPYNKLVQKSF RL F+DF RNPS  DEV+   L PF +LS DESY+SRDLEKA+
Sbjct: 247 YFVFHSPYNKLVQKSFARLVFSDFLRNPSSKDEVTNEKLGPFTTLSDDESYQSRDLEKAS 306

Query: 308 QQAAKHVYDAKVQPGTLIPKQVGNMYTASLYSAFASLLHNKHDSLVGKRVVMFSYGSGLT 367
           QQ AK +YD KVQP TLIPKQVGNMYTAS+Y+AFASLLHNK+ SL GKRV++FSYGSGLT
Sbjct: 307 QQVAKPLYDEKVQPSTLIPKQVGNMYTASIYAAFASLLHNKNSSLEGKRVILFSYGSGLT 366

Query: 368 ATMFSFRLQEGQQPFNLSNIVKLMNVSDKLKQRIEVTPEKFVETLKIMEQRYGAKDFVTS 427
           ATMFS +L+E + PF+LSNI ++M+V++KLK R E  P+KF+ETLK+ME RYGAKD+VTS
Sbjct: 367 ATMFSLQLRETKHPFSLSNIARVMDVAEKLKSRHEFPPQKFIETLKLMEHRYGAKDYVTS 426

Query: 428 MDCSYLHPGTFYLTKVDSMYRRFYSKKDTMS 458
            D S L PGTFYLT+VD+MYRRFY+ K + S
Sbjct: 427 KDSSLLAPGTFYLTEVDTMYRRFYTTKSSES 457


>Medtr5g011040.2 | 3-hydroxy-3-methylglutaryl coenzyme A synthase |
           HC | chr5:3104361-3108361 | 20130731
          Length = 427

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/412 (77%), Positives = 366/412 (88%)

Query: 8   NNVGILAIDIYFPPTCVQQGALEEHDGVSKGKYTIGLGQDCMAFCTDVEDVISMSLTVVT 67
           NNVGILA+DIYFPP CVQQ ALE HDG SKGKYTIGLGQDCM+FC+DVEDVISMSLTVV+
Sbjct: 7   NNVGILALDIYFPPNCVQQEALEAHDGASKGKYTIGLGQDCMSFCSDVEDVISMSLTVVS 66

Query: 68  SLLEKYNVDSKQIGRLEVGSETVIDKSKSIKTFLMQVFEESGNADIEGVDSTNACYGGTA 127
           +LL+KY +D KQIGRLEVGSETVIDKSKSIK+FLMQ+FE+ GN DIEGVDSTNACYGGTA
Sbjct: 67  TLLQKYEIDPKQIGRLEVGSETVIDKSKSIKSFLMQIFEKYGNTDIEGVDSTNACYGGTA 126

Query: 128 ALFNCVNWVESSSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPIVFESKLR 187
           ALFNCVNWVES+SWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPI FESKLR
Sbjct: 127 ALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPDAPISFESKLR 186

Query: 188 GSHMSHVYDFYKPNLASEYPVVDGMLSQTCYLMALDSCYRLLCEKFEKLEGRPFSISDSD 247
           GSHM+HVYDFYKP+LASEYPVVDG LSQTCYLMALD+C++  C+K+EK EG+ FS+SD+D
Sbjct: 187 GSHMAHVYDFYKPDLASEYPVVDGKLSQTCYLMALDTCFKNFCQKYEKHEGKQFSLSDAD 246

Query: 248 YFVFHSPYNKLVQKSFGRLYFNDFQRNPSFVDEVSRNALAPFASLSGDESYRSRDLEKAN 307
           YFVFHSPYNKLVQKSF RL F+DF RNPS  DEV+   L PF +LS DESY+SRDLEKA+
Sbjct: 247 YFVFHSPYNKLVQKSFARLVFSDFLRNPSSKDEVTNEKLGPFTTLSDDESYQSRDLEKAS 306

Query: 308 QQAAKHVYDAKVQPGTLIPKQVGNMYTASLYSAFASLLHNKHDSLVGKRVVMFSYGSGLT 367
           QQ AK +YD KVQP TLIPKQVGNMYTAS+Y+AFASLLHNK+ SL GKRV++FSYGSGLT
Sbjct: 307 QQVAKPLYDEKVQPSTLIPKQVGNMYTASIYAAFASLLHNKNSSLEGKRVILFSYGSGLT 366

Query: 368 ATMFSFRLQEGQQPFNLSNIVKLMNVSDKLKQRIEVTPEKFVETLKIMEQRY 419
           ATMFS +L+E + PF+LSNI ++M+V++KLK R EV   K +   + ++Q +
Sbjct: 367 ATMFSLQLRETKHPFSLSNIARVMDVAEKLKSRHEVLIHKHLVRYESIQQVF 418