Miyakogusa Predicted Gene

Lj2g3v0435530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0435530.1 Non Characterized Hit- tr|C4JAB5|C4JAB5_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,31.12,1e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; LIM_bind,NULL;
seg,NULL,NODE_8064_length_1370_cov_248.719711.path1.1
         (436 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein...   211   2e-54
Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein...   211   2e-54
Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein...   207   2e-53
Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein...   207   2e-53

>Medtr3g089075.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/152 (62%), Positives = 123/152 (80%), Gaps = 1/152 (0%)

Query: 1   MLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQL 60
           +L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+Q+
Sbjct: 437 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQI 496

Query: 61  VQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCL 120
             VAQK Q+ + ++ +   S  +LQ N NM + + R LAK+LE+  +NDLG++KRYVRCL
Sbjct: 497 GAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCL 555

Query: 121 QIAEVVNSMKDLIDFGREHKIGAIESLKTYPR 152
           QI+EVVNSMKDLID+ RE   G +ESL  +PR
Sbjct: 556 QISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr3g089075.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr3:40781704-40775494 | 20130731
          Length = 891

 Score =  211 bits (536), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/152 (62%), Positives = 123/152 (80%), Gaps = 1/152 (0%)

Query: 1   MLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQL 60
           +L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+Q+
Sbjct: 437 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQI 496

Query: 61  VQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCL 120
             VAQK Q+ + ++ +   S  +LQ N NM + + R LAK+LE+  +NDLG++KRYVRCL
Sbjct: 497 GAVAQKYQA-LTQNATPNASAPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCL 555

Query: 121 QIAEVVNSMKDLIDFGREHKIGAIESLKTYPR 152
           QI+EVVNSMKDLID+ RE   G +ESL  +PR
Sbjct: 556 QISEVVNSMKDLIDYSRETGTGPMESLAKFPR 587


>Medtr1g029400.1 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  207 bits (526), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 123/155 (79%), Gaps = 1/155 (0%)

Query: 1   MLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQL 60
           +L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+QL
Sbjct: 447 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 506

Query: 61  VQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCL 120
             VAQK Q+    + ++  S  +LQ N N+ + + R LAK+LE+  +NDLG++KRYVRCL
Sbjct: 507 GTVAQKYQACTQNAAANQ-SVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCL 565

Query: 121 QIAEVVNSMKDLIDFGREHKIGAIESLKTYPRHAT 155
           QI+EVVNSMKDLID+ RE   G ++SL  +PR  +
Sbjct: 566 QISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTS 600


>Medtr1g029400.2 | transcriptional corepressor SEUSS-like protein |
           HC | chr1:10071239-10080236 | 20130731
          Length = 911

 Score =  207 bits (526), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 94/155 (60%), Positives = 123/155 (79%), Gaps = 1/155 (0%)

Query: 1   MLEYAKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQL 60
           +L+YAKA+QESV+EQLRVVR+GQLRI+F+ DLKI SWEFCARRHEEL+PRRL+ PQV+QL
Sbjct: 447 VLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQL 506

Query: 61  VQVAQKCQSTIAESGSDGISQQDLQTNSNMVLTAGRHLAKSLELQSLNDLGFSKRYVRCL 120
             VAQK Q+    + ++  S  +LQ N N+ + + R LAK+LE+  +NDLG++KRYVRCL
Sbjct: 507 GTVAQKYQACTQNAAANQ-SVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCL 565

Query: 121 QIAEVVNSMKDLIDFGREHKIGAIESLKTYPRHAT 155
           QI+EVVNSMKDLID+ RE   G ++SL  +PR  +
Sbjct: 566 QISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTS 600