Miyakogusa Predicted Gene

Lj2g3v0360350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0360350.1 tr|G8A1M6|G8A1M6_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_122s0047 PE=4 SV=1,44.44,0.0000000000002,no
description,NULL; FBOX,F-box domain, cyclin-like; seg,NULL; F-box
domain,F-box domain, cyclin-lik,CUFF.34523.1
         (361 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g046515.1 | hypothetical protein | LC | chr7:16506580-1650...    82   6e-16

>Medtr7g046515.1 | hypothetical protein | LC |
           chr7:16506580-16504078 | 20130731
          Length = 771

 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 7/127 (5%)

Query: 65  QAKEANSYAVKVSEEEAKMMEI---LEQKVRAMQGMESYESLDMQSFYLFPDMEIPPKFK 121
             +  N   +K  EE  +M E+   L  +++A +G  + +S   Q   L P +++P KFK
Sbjct: 639 NTQHGNIPVIKTMEE--RMEELAKELRHEIKANRG--NADSFKTQDLCLVPKVDVPKKFK 694

Query: 122 VPDFEKFEGRSDPVIHLTMYARSMATYYQNEKLMIHCFQHSLTGGALNWFLHLDKNQTKT 181
           + DF+++ G + P  H+  Y R M  Y  N+ LMIHCFQ SL   A  W+  L KN   T
Sbjct: 695 ISDFDRYNGLTCPQNHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHT 754

Query: 182 WRGLAEL 188
           +  LA L
Sbjct: 755 FDELAML 761