Miyakogusa Predicted Gene

Lj2g3v0346200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0346200.1 Non Characterized Hit- tr|B6SI10|B6SI10_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,36.51,4e-19,
,NODE_48648_length_876_cov_65.003426.path1.1
         (222 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g100800.1 | plant/K24M7-17 protein | HC | chr1:45250592-45...   318   2e-87
Medtr8g094540.1 | transmembrane protein, putative | HC | chr8:39...   116   2e-26
Medtr3g096890.3 | transmembrane protein, putative | HC | chr3:44...   101   5e-22
Medtr3g096890.1 | transmembrane protein, putative | HC | chr3:44...   100   1e-21

>Medtr1g100800.1 | plant/K24M7-17 protein | HC |
           chr1:45250592-45249391 | 20130731
          Length = 246

 Score =  318 bits (816), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/222 (70%), Positives = 185/222 (83%), Gaps = 1/222 (0%)

Query: 1   MSGGVGPTGCDISLPKEQEIEHKEQQDSNKSLKNPQKPTRKAGFFSFRQLNCLALVIVLS 60
           MSGGVGPTGCDISLPKE++    +++      K+   P RK  F SFRQLNCLA+V+VLS
Sbjct: 1   MSGGVGPTGCDISLPKEEQEIEHKEEQDKSLNKSTSTPQRKTSFLSFRQLNCLAVVVVLS 60

Query: 61  ASGLVSVEDFGFVVFSMIYMYFMSKIAFPLHPNSREPSVFNPQNKLLGLYVLIGAIIGLY 120
           ASG+VS EDFGFV+FS+IYM F+SK+AFP HP+  +P +F  Q K+L +YV IGAIIGLY
Sbjct: 61  ASGMVSPEDFGFVLFSVIYMCFISKVAFPSHPSKEQPPIFTQQIKILKIYVFIGAIIGLY 120

Query: 121 APIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGIAFSDGFSLPIRAFVPILYNSTRI 180
           APIAYIL GIFEGDKEGIKAA PHVFLLASQVFMEG+AFS+GFS PIRAFVP++YNS RI
Sbjct: 121 APIAYILHGIFEGDKEGIKAATPHVFLLASQVFMEGVAFSNGFSSPIRAFVPVIYNSRRI 180

Query: 181 FTILEWVKTEIYKSTSDEHSGSYRRMYAGRALAVANMAFWCF 222
           FTI++W++ EI K   +EHSGSY+R+YAGRALAVANMAFWCF
Sbjct: 181 FTIVDWLRDEISK-VGEEHSGSYKRIYAGRALAVANMAFWCF 221


>Medtr8g094540.1 | transmembrane protein, putative | HC |
           chr8:39475315-39474161 | 20130731
          Length = 262

 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 101/176 (57%), Gaps = 4/176 (2%)

Query: 49  QLNCLALVIVLSASGLVSVEDFGFVVFSMIYMYFMSKIAFPLHPNSREPSVFNPQNKLLG 108
           +L  +A V+V SASGLV + D  F  F  IY+  +S+ AFP +      +VF+  +K   
Sbjct: 34  ELQLVAFVLVFSASGLVPLLDLLFPFFVSIYLVALSRFAFPSYNRGVSQTVFH-GSKAFQ 92

Query: 109 LYVLIGAIIGLYAPIAYILEGIFEGDKEGIKAAAPHVFLLASQVFMEGIAFS-DGFSLPI 167
            YV++G I+GL+ P+AY+L G   GDK  +K+A+PH+FL++ Q+  E I      FS P+
Sbjct: 93  FYVIVGTILGLFLPLAYVLGGFGRGDKLAVKSASPHLFLISFQILTENIISGLSVFSPPV 152

Query: 168 RAFVPILYNSTRIFTILEWVKTEIYKST--SDEHSGSYRRMYAGRALAVANMAFWC 221
           RA VP++Y   RIF  + W+       T  ++ H       + GR LAVAN+ ++ 
Sbjct: 153 RALVPLMYTVRRIFVDINWIHNVWLNITLPANAHFKDKAWFWFGRVLAVANLVYFS 208


>Medtr3g096890.3 | transmembrane protein, putative | HC |
           chr3:44344457-44342562 | 20130731
          Length = 269

 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 117/207 (56%), Gaps = 12/207 (5%)

Query: 25  QQDSNKSLKNPQKPTRKAGFFSFR--QLNCLALVIVLSASGLVSVEDFGFVVFSMIYMYF 82
           Q    K+ +  + P+      S R  +L  +A ++V SASGLV + D  F   +  Y+  
Sbjct: 15  QTPGTKANQRSEAPSAGGMMGSLRVIELQLVAFILVFSASGLVPLLDLVFPALASAYILA 74

Query: 83  MSKIAFPLHPNS----REPSVFNPQNKLLGLYVLIGAIIGLYAPIAYILEGIFEGDKEGI 138
           +++ AFP  P++    ++  +F   + +  +Y+++G  IGL+ P+AY+L G   GD+  +
Sbjct: 75  LARYAFPSSPSTTSNSQQQEIFQ-VSSMFRMYIIVGTTIGLFLPLAYVLGGFARGDQHAV 133

Query: 139 KAAAPHVFLLASQVFMEGIAFS-DGFSLPIRAFVPILYNSTRIFTILEWVKTEIYKSTSD 197
           ++A PH+FLL+ Q+  E I  S   FS P+RA VP++Y   RIF  ++W+  +++ + + 
Sbjct: 134 RSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRIFVDIDWIN-DVWLNKTF 192

Query: 198 EHSGSYRRM---YAGRALAVANMAFWC 221
             +  ++     + G+ LAVAN+A++ 
Sbjct: 193 PANARFQDTAWYWFGKGLAVANLAYFS 219


>Medtr3g096890.1 | transmembrane protein, putative | HC |
           chr3:44344524-44342621 | 20130731
          Length = 333

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 116/205 (56%), Gaps = 12/205 (5%)

Query: 25  QQDSNKSLKNPQKPTRKAGFFSFR--QLNCLALVIVLSASGLVSVEDFGFVVFSMIYMYF 82
           Q    K+ +  + P+      S R  +L  +A ++V SASGLV + D  F   +  Y+  
Sbjct: 79  QTPGTKANQRSEAPSAGGMMGSLRVIELQLVAFILVFSASGLVPLLDLVFPALASAYILA 138

Query: 83  MSKIAFPLHPNS----REPSVFNPQNKLLGLYVLIGAIIGLYAPIAYILEGIFEGDKEGI 138
           +++ AFP  P++    ++  +F   + +  +Y+++G  IGL+ P+AY+L G   GD+  +
Sbjct: 139 LARYAFPSSPSTTSNSQQQEIFQ-VSSMFRMYIIVGTTIGLFLPLAYVLGGFARGDQHAV 197

Query: 139 KAAAPHVFLLASQVFMEGIAFS-DGFSLPIRAFVPILYNSTRIFTILEWVKTEIYKSTSD 197
           ++A PH+FLL+ Q+  E I  S   FS P+RA VP++Y   RIF  ++W+  +++ + + 
Sbjct: 198 RSATPHLFLLSFQILTENIISSLSLFSPPVRALVPMIYTIRRIFVDIDWIN-DVWLNKTF 256

Query: 198 EHSGSYRRM---YAGRALAVANMAF 219
             +  ++     + G+ LAVAN+A+
Sbjct: 257 PANARFQDTAWYWFGKGLAVANLAY 281