Miyakogusa Predicted Gene

Lj2g3v0343920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0343920.1 tr|A9S3M4|A9S3M4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_162641,38.97,7e-19, ,CUFF.34508.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084320.1 | rickettsia surface antigen family protein, put...   178   1e-45

>Medtr4g084320.1 | rickettsia surface antigen family protein,
           putative | HC | chr4:32846581-32849674 | 20130731
          Length = 201

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/147 (59%), Positives = 103/147 (70%), Gaps = 2/147 (1%)

Query: 1   MADTTQGSSS--FWDGYKEFWSQRFAFLGNYSKFVKREKPVRSWSSSDVEEFIAYDPVHG 58
           MA  TQ SSS  FW+GYKEFW +RF+F+ NYS F KR+KP+ SWS+SDVE+FIA DPV G
Sbjct: 55  MASNTQDSSSQSFWEGYKEFWGERFSFMSNYSNFTKRDKPLTSWSNSDVEDFIASDPVLG 114

Query: 59  PVLKTAREAVQYXXXXXXXXXXXXXXXXXKYSKXXXXXXXXXXXXXIFGWTFGHEVANHA 118
           PVLKTAREAVQY                 KYS+             +FGWT+GHE+ANHA
Sbjct: 115 PVLKTAREAVQYGLAGSALGALFTASFAWKYSRSLHGAGLSFLAGGVFGWTYGHEIANHA 174

Query: 119 LQLYRVDTLAAEAKFLDWWKFKTEGSD 145
           LQLYRVDTLA+EAKFL+WWK KTEG +
Sbjct: 175 LQLYRVDTLASEAKFLEWWKRKTEGGN 201