Miyakogusa Predicted Gene

Lj2g3v0343890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0343890.1 Non Characterized Hit- tr|C5X6M2|C5X6M2_SORBI
Putative uncharacterized protein Sb02g012570
OS=Sorghu,43.56,3e-16,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.34505.1
         (439 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g045493.1 | hydroxyproline-rich glycoprotein family protei...   584   e-167
Medtr8g098495.1 | hydroxyproline-rich glycoprotein family protei...   201   1e-51
Medtr1g026560.1 | hydroxyproline-rich glycoprotein family protei...   127   2e-29

>Medtr6g045493.1 | hydroxyproline-rich glycoprotein family protein |
           HC | chr6:16415254-16411073 | 20130731
          Length = 487

 Score =  584 bits (1506), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 312/459 (67%), Positives = 349/459 (76%), Gaps = 26/459 (5%)

Query: 3   KKRWXXXXXXXXXXXXQ-KSSKRIGHXXXXXXXXXXXXXXXXXXXQNPSTSILMPFIXXX 61
           KKRW              K+SKRIGH                    NPST+I++PFI   
Sbjct: 33  KKRWGSCFSLPSCFGSHNKTSKRIGHAVLVPEPVAPTVPVANAA-PNPSTAIVIPFIAPP 91

Query: 62  XXXXXFLQSDPPSATHSPA-GLLSLTSLAANAYXXXXXXXIFTIGPYAYETQLVSPPVFS 120
                FLQSDPPS+THSPA GLLSL+SL+ANAY       +FTIGPYAYETQLVSPPVFS
Sbjct: 92  SSPASFLQSDPPSSTHSPAAGLLSLSSLSANAYSTSGPASMFTIGPYAYETQLVSPPVFS 151

Query: 121 NFTTEPSTASFTPPPESVQLTTPSSPEVPFAQLLASSLDRARKSNGSQKFALYNYEFQPY 180
           NFTTEPSTA+FTPPPESV +TTPSSPEVPFAQLLASSLDRARKSN   KFALYNYE+QPY
Sbjct: 152 NFTTEPSTANFTPPPESVLMTTPSSPEVPFAQLLASSLDRARKSN--HKFALYNYEYQPY 209

Query: 181 QQYPGSPGGQLISPGSAFSTSGTSTPFPDRRP-------------------TRKWSSRMG 221
           QQYPGSPG QL+SPGS  STSGTSTPFPDRR                    TRKW SR+G
Sbjct: 210 QQYPGSPGAQLVSPGSVISTSGTSTPFPDRRSSLELRKGEAPKILGFEHFSTRKWMSRIG 269

Query: 222 SGSLTPESAGQGSRLGSGSLTPNGVGLASRLGSGCVTPDGLGQDSRLGSGSLTPDGAGPS 281
           SGSLTP+  GQGSRLGSGSLTP+GV   SRLGSGC TPDGLGQDSRLGSGSLTPDG GP+
Sbjct: 270 SGSLTPDGTGQGSRLGSGSLTPDGVSHTSRLGSGCATPDGLGQDSRLGSGSLTPDGVGPT 329

Query: 282 SQDRISVQNQFSGEASLANTENGIQSNSTLVDHRVSFELTGEDVARCLANKTGILLRNIS 341
           ++D I VQNQ     S+AN+++G Q+N+TLVDHRVSFELTGEDVARCLANKTG LLRN+S
Sbjct: 330 TRDSIDVQNQIPVGVSVANSDHGSQTNATLVDHRVSFELTGEDVARCLANKTGALLRNMS 389

Query: 342 RSSQGILAKDPIERDNIQRDSSSCCDVCSGET-NDKQCCQKHHSVNSSSKEFNFDSRKGD 400
            SSQGILAKDPI+R+ I ++++SCCDVCSG+    + CC K +SV SSSKEFNFD+RKGD
Sbjct: 390 SSSQGILAKDPIDREKILKETNSCCDVCSGKAIGGEHCCPKRNSV-SSSKEFNFDNRKGD 448

Query: 401 VSGTAANSSEWWANKKVVGKESKSANSWAFFPMLQPEIS 439
           VSGT+AN S WW NKKV GKESKS NSWAFFPMLQP+IS
Sbjct: 449 VSGTSANGSSWWTNKKVDGKESKSVNSWAFFPMLQPDIS 487


>Medtr8g098495.1 | hydroxyproline-rich glycoprotein family protein |
           HC | chr8:41086006-41083003 | 20130731
          Length = 460

 Score =  201 bits (511), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 164/462 (35%), Positives = 224/462 (48%), Gaps = 67/462 (14%)

Query: 2   QKKRWXXXXXXXXXXXXQKSS-KRIGHX----XXXXXXXXXXXXXXXXXXQNPSTSILMP 56
           QKK+W            QK++ KRIGH                       Q P  SI +P
Sbjct: 42  QKKKWGNWLNITGCFGYQKNNRKRIGHAVLVPETTPTGADAAANAVSSTAQAPP-SITLP 100

Query: 57  FIXXXXXXXXFLQSDPPSATHSPAGLLSLTSLAANAYXXXXXXXIFTIGPYAYETQLVSP 116
           FI        F QS+PPS   SP G+LS TS++A+ Y       IF IGPYA+ETQLVSP
Sbjct: 101 FIAPPSSPASFFQSEPPSTAQSPVGILSKTSVSASMYSPGGPNSIFAIGPYAHETQLVSP 160

Query: 117 PVFSNFTTEPSTASFTPPPESVQLTTPSSPEVPFAQLLASSLDRARKSNGSQKFALYNYE 176
           PVFS      STA FTPPPESV LTTPSSPEVPFAQL  S+   +R S   Q+  + +Y+
Sbjct: 161 PVFS----ASSTAPFTPPPESVHLTTPSSPEVPFAQLFDSN---SRNSETYQRLQISHYD 213

Query: 177 FQPYQQYPGSPGGQLISPGSAFSTSGTSTPFPDRRPTRKWSSRMGSGSLTPESAGQGSRL 236
           FQ YQ  PGSP G LISP SA   SGTS+P PD         ++ +  L          L
Sbjct: 214 FQNYQFQPGSPVGPLISPRSAI--SGTSSPLPDEF------KKLDTAKLL--------HL 257

Query: 237 GSGSLTPNGVGLASRLGSGCVTPDGLGQDSRLGSGSLTPDGAGPSSQDRISVQNQFSGEA 296
              S+        S   SG +TPD +         + T  G  P         N +  + 
Sbjct: 258 DKLSIY---GKQKSSQSSGSITPDAV-------KATTTQAGFFP---------NHWVSDI 298

Query: 297 SLANTENGIQSNSTLVDHRVSFELTGEDVARCLANK-------TGIL--LRNISRSSQGI 347
            ++   +    N T V+HRVSFEL+ +  +  + NK       T +L   +N + ++   
Sbjct: 299 KISPCPSNNHRNETSVNHRVSFELSAQKASSSVENKPPASSQWTKVLSKFKNDAAAAAKT 358

Query: 348 LAKDP---IER--DNIQRDSSSCCDV-----CSGETNDKQCCQKHHSVNSSSKEFNFDSR 397
             K+    IE   D+ Q  + +  D       +  T D++  Q     +SS+KEFNF + 
Sbjct: 359 TDKEENHSIENECDDKQVVTETLIDTTKQRKAAEATVDEKDHQSLTLSSSSTKEFNFANA 418

Query: 398 KGDVSGTAANSSEWWANKKVVGKESKSANSWAFFPMLQPEIS 439
           +G  S      ++WWAN+KV G E+ ++  W+FFP++QP +S
Sbjct: 419 EGGDSPAPNIVADWWANEKVAGNENAASKDWSFFPIIQPHVS 460


>Medtr1g026560.1 | hydroxyproline-rich glycoprotein family protein,
           putative | HC | chr1:8668237-8665743 | 20130731
          Length = 484

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 122/257 (47%), Gaps = 18/257 (7%)

Query: 1   MQKKRWXXXXXXXXXXXXQKSSKRI---GHXXXXXXXXXXXXXXXXXXXQNPSTSILMPF 57
           +++KRW            QK  KRI                         N +T I    
Sbjct: 23  LRRKRWGGCLGAFSCFSSQKGGKRIVPASRIPDNNGSASQPNGPQVAGLTNQATGIAPSL 82

Query: 58  IXXXXXXXXFLQSDPPSATHSPAGLLSLTSLAANAYXXXXXXXIFTIGPYAYETQLVSPP 117
           +        F  S  PS   SP+  LSL++ +           ++  GPYA+ETQLVSPP
Sbjct: 83  LAPPSSPASFTHSALPSTAQSPSCFLSLSANSPGG----PSNSMYATGPYAHETQLVSPP 138

Query: 118 VFSNFTTEPSTASFTPPPESVQLTTPSSPEVPFAQLLASSLDRARKSNGSQKFALYNYEF 177
           VFSNFTTEPSTA  TPPPE   LTTPSSP+VPFA  L SS +   K+ G   +   N   
Sbjct: 139 VFSNFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLTSSAN--LKNGGKGNYITANDLQ 196

Query: 178 QPYQQYPGSPGGQLISPGSAFSTSGTSTPFPDRRPTRKWSSRMGSGSLTPESAGQGSRLG 237
             Y  YPGSP   LISP S  S    ST FP+R    +W S     SL PE+ G+  R G
Sbjct: 197 TTYSLYPGSPASSLISPISRNSGDCLSTSFPEREFRPQWDS-----SLYPEN-GKYQRTG 250

Query: 238 SGSLT---PNGVGLASR 251
           SG ++    N V +AS+
Sbjct: 251 SGRVSGHDTNDVTMASQ 267