Miyakogusa Predicted Gene

Lj2g3v0276780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0276780.1 Non Characterized Hit- tr|E1ZGY6|E1ZGY6_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,40.71,0.000000000000002,seg,NULL; Ctf8,Chromosome
transmission fidelity protein 8,CUFF.34446.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g471020.1 | chromosome transmission fidelity protein, puta...   196   5e-51

>Medtr6g471020.1 | chromosome transmission fidelity protein,
           putative | HC | chr6:25417447-25413582 | 20130731
          Length = 137

 Score =  196 bits (498), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/137 (69%), Positives = 109/137 (79%)

Query: 1   MEIRIRCNCGEGSCVEWGIVELQGVVEPQPEFQDSLPNLEIGTLCRPSSQEVYTLTIGYH 60
           M+IR++CNC EG+CVEWGIVELQGVVEPQP FQDSL NL+IGTLCRPSSQEVYTLTIGYH
Sbjct: 1   MQIRVQCNCEEGNCVEWGIVELQGVVEPQPGFQDSLANLQIGTLCRPSSQEVYTLTIGYH 60

Query: 61  ELAGSXXXXXXXXXXXXXXXHPEGESGGHVELQVVGIIRHRILFKTRPKAIISRPQITSR 120
           EL GS               HP+G+S G VEL+VVGIIR +ILFKTRP+AIIS+P +TS+
Sbjct: 61  ELTGSKVSLKKPLLVLKKVKHPDGDSCGQVELRVVGIIRQKILFKTRPRAIISKPPVTSK 120

Query: 121 EKQTPIILGSSPSNQAA 137
           EKQ  I  GS+PSNQA 
Sbjct: 121 EKQKSITTGSAPSNQAV 137