Miyakogusa Predicted Gene

Lj2g3v0216910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0216910.1 Non Characterized Hit- tr|I1MNY2|I1MNY2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52620
PE,73.86,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; zf-C2H2,Zinc finger,
C2H2; zinc finger,Zinc finger, C2H2-like;,CUFF.34369.1
         (510 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g093095.1 | C2H2-type zinc finger protein | HC | chr1:4193...   109   7e-24
Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | ...   105   2e-22
Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |...   103   4e-22
Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC | chr1...   102   6e-22
Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC | chr1...   102   7e-22
Medtr2g099990.1 | C2H2-type zinc finger protein | HC | chr2:4289...   101   2e-21
Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC | chr1...   100   4e-21
Medtr2g093960.1 | C2H2-type zinc finger protein | LC | chr2:4003...   100   6e-21
Medtr1g016010.1 | C2H2-type zinc finger protein | HC | chr1:4158...    97   5e-20
Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |...    96   1e-19
Medtr2g099990.2 | C2H2-type zinc finger protein | HC | chr2:4289...    94   3e-19
Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC | chr1...    94   4e-19

>Medtr1g093095.1 | C2H2-type zinc finger protein | HC |
           chr1:41939075-41940250 | 20130731
          Length = 294

 Score =  109 bits (272), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 5/163 (3%)

Query: 269 ILAPHAHFCTICGKGFKRDANLRMHMRGHGDEY-KTPAALAKPHKESGSQPKLIKRYSCP 327
           ++ P    CT+C K F R  N++MHM GHG +Y K P +L  P   S S    +  Y C 
Sbjct: 109 LVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSSMLKLPCYCCA 168

Query: 328 YHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLKTHEKHCGK 387
             GC+ N ++ +  PLK    ++ HYKR H  KS+ C +C  K F+V  D +THEK+CGK
Sbjct: 169 -EGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCR-KTFAVRGDWRTHEKNCGK 226

Query: 388 DKWLCSCGTTFSRKDKLFGHIALF-QGHTPAIPLDESKENNKV 429
             W C CG+ F  K  L  H+  F  GH P      S + +KV
Sbjct: 227 -LWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDGHKV 268


>Medtr4g059870.1 | C2H2 and C2HC zinc finger protein, putative | HC
           | chr4:22086566-22083892 | 20130731
          Length = 495

 Score =  105 bits (261), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/157 (34%), Positives = 83/157 (52%), Gaps = 13/157 (8%)

Query: 255 PPGSYEILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKES 314
           P    E++ +  + ++A +   C IC KGF+RD NL++H RGH   +K         K+ 
Sbjct: 47  PDPESEVVAMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKL--------KQR 98

Query: 315 GSQPKLIKR-YSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFS 373
            ++ ++ K+ Y CP   C     H+    L  +  +K HY R H +K + C +C +KK++
Sbjct: 99  ANKDQIRKKVYVCPEKTCVH---HEPSRALGDLTGIKKHYSRKHGEKKWKCEKC-SKKYA 154

Query: 374 VLADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
           V +D K H K CG  ++ C CGT FSRKD    H A 
Sbjct: 155 VQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAF 191


>Medtr8g017210.1 | C2H2-like zinc finger protein, putative | HC |
           chr8:5790010-5786899 | 20130731
          Length = 517

 Score =  103 bits (257), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 12/156 (7%)

Query: 255 PPGSYEILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKES 314
           P    E++ +  + +LA +   C IC KGF+RD NL++H RGH   +K         K+ 
Sbjct: 71  PDPDAEVIAMSPKSLLAKNRFICEICNKGFQRDQNLQLHRRGHNLPWKL--------KQR 122

Query: 315 GSQPKLIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSV 374
            S+    K Y CP   C     H     L  +  +K H+ R H +K + C +C +KK++V
Sbjct: 123 TSKEIRKKVYVCPEPTCVH---HDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAV 178

Query: 375 LADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            +D K H K CG  ++ C CGT FSR+D    H A 
Sbjct: 179 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 214


>Medtr1g112270.1 | C2H2 zinc finger protein, putative | HC |
           chr1:50789869-50782797 | 20130731
          Length = 582

 Score =  102 bits (255), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 82/158 (51%), Gaps = 13/158 (8%)

Query: 253 NLPPGSYEILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHK 312
           NL P + E++ L  + ++A +   C +C KGF+R+ NL++H RGH   +K      K   
Sbjct: 63  NLYPDA-EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK--- 118

Query: 313 ESGSQPKLIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKF 372
               +PK  K Y CP   C     H     L  +  +K HY R H +K + C +C +KK+
Sbjct: 119 ----EPKR-KVYLCPEPTCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKC-SKKY 169

Query: 373 SVLADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
           +V +D K H K CG  ++ C CGT FSR+D    H A 
Sbjct: 170 AVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 207


>Medtr1g112270.2 | C2H2 zinc finger protein, putative | HC |
           chr1:50790900-50782752 | 20130731
          Length = 571

 Score =  102 bits (255), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 12/151 (7%)

Query: 260 EILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPK 319
           E++ L  + ++A +   C +C KGF+R+ NL++H RGH   +K      K       +PK
Sbjct: 58  EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTK-------EPK 110

Query: 320 LIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLK 379
             K Y CP   C     H     L  +  +K HY R H +K + C +C +KK++V +D K
Sbjct: 111 R-KVYLCPEPTCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKC-SKKYAVQSDWK 165

Query: 380 THEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            H K CG  ++ C CGT FSR+D    H A 
Sbjct: 166 AHSKTCGTREYRCDCGTLFSRRDSFITHRAF 196


>Medtr2g099990.1 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 468

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 12/156 (7%)

Query: 255 PPGSYEILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKES 314
           P    E++ L  + ++A +   C IC KGF+RD NL++H RGH   +K         K+ 
Sbjct: 55  PDPQAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL--------KQR 106

Query: 315 GSQPKLIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSV 374
            S     K Y CP   C     H     L  +  +K H+ R H +K + C +C +KK++V
Sbjct: 107 TSNEIRKKVYVCPEPTCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAV 162

Query: 375 LADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            +D K H K CG  ++ C CGT FSR+D    H A 
Sbjct: 163 QSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 198


>Medtr1g094115.2 | C2H2 zinc finger protein, putative | HC |
           chr1:42286106-42289867 | 20130731
          Length = 539

 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 12/151 (7%)

Query: 260 EILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPK 319
           E++ L  + ++A +   C +C KGF+R+ NL++H RGH   +K         ++S  +P+
Sbjct: 61  EVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLK-------QKSNKEPR 113

Query: 320 LIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLK 379
             K Y CP   C     H     L  +  +K H+ R H +K + C +C +KK++V +D K
Sbjct: 114 R-KVYLCPEPTCVH---HDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWK 168

Query: 380 THEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            H K CG  ++ C CGT FSR+D    H A 
Sbjct: 169 AHSKTCGTREYRCDCGTLFSRRDSFITHRAF 199


>Medtr2g093960.1 | C2H2-type zinc finger protein | LC |
           chr2:40039886-40042385 | 20130731
          Length = 414

 Score = 99.8 bits (247), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 11/151 (7%)

Query: 260 EILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPK 319
           E++ L  + ++  +   C +C KGFKRD NL++H RGH      P  L + +K    + K
Sbjct: 46  EVIALSPKSLMTSNRFICEVCNKGFKRDQNLQLHRRGH----NLPWKLKQRNKLEVIRKK 101

Query: 320 LIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLK 379
           +   Y CP   C     H     L  +  +K H+ R H +K + C +C +KK++V +D K
Sbjct: 102 V---YVCPEKSCVH---HDPSRALGDLTGIKKHFSRKHGEKKWKCDKC-SKKYAVQSDWK 154

Query: 380 THEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            H K CG  ++ C CGT FSRKD    H A 
Sbjct: 155 AHSKICGTKEYRCDCGTLFSRKDSFLTHRAF 185


>Medtr1g016010.1 | C2H2-type zinc finger protein | HC |
           chr1:4158857-4161721 | 20130731
          Length = 452

 Score = 96.7 bits (239), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 255 PPGSYEILQLEKEEILAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKES 314
           P    ++L L  + +LA +   C IC KGF+RD NL++H RGH   +K         K +
Sbjct: 50  PDPEAQVLALSPQTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLK-------KRN 102

Query: 315 GSQPKLIKRYSCPYHGCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSV 374
            ++    K Y CP   C     H     L  +  +K H+ R H +K + C +C +K+++V
Sbjct: 103 VNEIIRKKVYVCPEPTCVH---HDPSRALGDLTGIKKHFFRKHGEKKWKCEKC-SKRYAV 158

Query: 375 LADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIAL 410
            +D K H K CG  ++ C CGT FSR+D    H A 
Sbjct: 159 QSDWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAF 194


>Medtr2g090745.1 | C2H2-like zinc finger protein, putative | HC |
           chr2:38896799-38894235 | 20130731
          Length = 429

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 24/181 (13%)

Query: 230 NREMEQNYMEEHEYKDEDADDGDNLPPGSYEILQLEKEEILAPHAHFCTICGKGFKRDAN 289
           NRE+   ++ E+    E             E++ L  + ++A +   C IC K F+RD N
Sbjct: 3   NREISNGFLHENTTNPEA------------EVISLSPKTLMATNRFVCEICLKDFQRDQN 50

Query: 290 LRMHMRGHGDEYKTPAALAKPHKESGSQPKLIKRYSCPYHGCKRNKDHKKFLPLKTILCV 349
           L++H RGH   +K     +K  ++        + Y CP   C  N   +    L  +  +
Sbjct: 51  LQLHRRGHNLPWKLKQRTSKEIRK--------RVYVCPEKTCVHNHPSR---ALGDLTGI 99

Query: 350 KNHYKRTHCDKSYTCSRCNTKKFSVLADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIA 409
           K H+ R H +K + C +C +K ++V +D K H K CG  ++ C CGT FSR+D    H A
Sbjct: 100 KKHFCRKHGEKKWKCEKC-SKFYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFVTHRA 158

Query: 410 L 410
            
Sbjct: 159 F 159


>Medtr2g099990.2 | C2H2-type zinc finger protein | HC |
           chr2:42897047-42899888 | 20130731
          Length = 399

 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 12/141 (8%)

Query: 270 LAPHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPKLIKRYSCPYH 329
           +A +   C IC KGF+RD NL++H RGH   +K         K+  S     K Y CP  
Sbjct: 1   MATNRFICEICNKGFQRDQNLQLHKRGHNLPWKL--------KQRTSNEIRKKVYVCPEP 52

Query: 330 GCKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLKTHEKHCGKDK 389
            C     H     L  +  +K H+ R H +K + C +C +KK++V +D K H K CG  +
Sbjct: 53  TCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSDWKAHSKTCGTRE 108

Query: 390 WLCSCGTTFSRKDKLFGHIAL 410
           + C CGT FSR+D    H A 
Sbjct: 109 YRCDCGTLFSRRDSFITHRAF 129


>Medtr1g094115.1 | C2H2 zinc finger protein, putative | HC |
           chr1:42286195-42289752 | 20130731
          Length = 522

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 12/140 (8%)

Query: 271 APHAHFCTICGKGFKRDANLRMHMRGHGDEYKTPAALAKPHKESGSQPKLIKRYSCPYHG 330
            P    C +C KGF+R+ NL++H RGH   +K         ++S  +P+  K Y CP   
Sbjct: 55  TPSKFICEVCNKGFQREQNLQLHRRGHNLPWKLK-------QKSNKEPRR-KVYLCPEPT 106

Query: 331 CKRNKDHKKFLPLKTILCVKNHYKRTHCDKSYTCSRCNTKKFSVLADLKTHEKHCGKDKW 390
           C     H     L  +  +K H+ R H +K + C +C +KK++V +D K H K CG  ++
Sbjct: 107 CVH---HDPSRALGDLTGIKKHFSRKHGEKKWKCEKC-SKKYAVQSDWKAHSKTCGTREY 162

Query: 391 LCSCGTTFSRKDKLFGHIAL 410
            C CGT FSR+D    H A 
Sbjct: 163 RCDCGTLFSRRDSFITHRAF 182