Miyakogusa Predicted Gene

Lj2g3v0205750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0205750.1 tr|A9SFF8|A9SFF8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_211738,31.79,4e-16,LIPID-BINDING SERUM GLYCOPROTEIN
FAMILY PROTEIN,NULL; BACTERICIDAL PERMEABILITY-INCREASING (BPI)
PRO,CUFF.34363.1
         (200 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g054360.1 | LBP/BPI/CETP family, carboxy-terminal domain p...   229   1e-60
Medtr5g093980.1 | LBP/BPI/CETP family, carboxy-terminal domain p...   191   3e-49
Medtr5g084690.1 | LBP/BPI/CETP family, carboxy-terminal domain p...   151   4e-37

>Medtr3g054360.1 | LBP/BPI/CETP family, carboxy-terminal domain
           protein | HC | chr3:21576507-21571947 | 20130731
          Length = 492

 Score =  229 bits (584), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 113/155 (72%), Positives = 128/155 (82%)

Query: 31  LRSRLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPV 90
           L   LVDAF   IASSVEEA+S++I EGI KLD  LQ+LPKQ+ LDKT +LNVSFVGNPV
Sbjct: 180 LYQLLVDAFQDIIASSVEEAISDQITEGIVKLDNILQALPKQVSLDKTVSLNVSFVGNPV 239

Query: 91  LSNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYF 150
           LSNSSIAIAINGLF   SEV   + YK GFK+SSACGGLP MIKVS+HE V +SASLVYF
Sbjct: 240 LSNSSIAIAINGLFARTSEVFVPQSYKNGFKVSSACGGLPKMIKVSIHEDVFKSASLVYF 299

Query: 151 NAGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           NAGK+Q++IDEL DQ +LNTA  RFIVPQLYK+YP
Sbjct: 300 NAGKLQMVIDELHDQALLNTAGWRFIVPQLYKRYP 334


>Medtr5g093980.1 | LBP/BPI/CETP family, carboxy-terminal domain
           protein | HC | chr5:41053853-41049021 | 20130731
          Length = 490

 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/151 (60%), Positives = 118/151 (78%)

Query: 35  LVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVLSNS 94
           LVDAF GNI S+VE+AVS+KI EGI  LD  LQ+LPK I +D+T+ALN+SFV NPVLSNS
Sbjct: 182 LVDAFKGNIGSAVEDAVSKKIREGIPTLDNLLQTLPKTISIDETAALNISFVDNPVLSNS 241

Query: 95  SIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPNMIKVSLHEYVIQSASLVYFNAGK 154
           SI + I+GLFTER++V+  + Y +   IS + GGLP MI +SLHE V +SAS VYF A  
Sbjct: 242 SIELEIDGLFTERNDVLVPQVYHRRSDISVSSGGLPKMINISLHENVFKSASEVYFAADA 301

Query: 155 MQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           +Q I+DELP+Q +LNTA+ + ++PQLYKQYP
Sbjct: 302 LQWILDELPNQALLNTADWKILIPQLYKQYP 332


>Medtr5g084690.1 | LBP/BPI/CETP family, carboxy-terminal domain
           protein | HC | chr5:36538521-36542968 | 20130731
          Length = 494

 Score =  151 bits (381), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/157 (46%), Positives = 108/157 (68%), Gaps = 1/157 (0%)

Query: 30  LLRSRLVDAFGGNIASSVEEAVSEKINEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNP 89
            L   ++DAF GNI S+VE A+++K+ EGI +LD +L+SLPK++P+D  S+LNV+FV N 
Sbjct: 183 WLYQGILDAFEGNIGSAVENAITKKLGEGITRLDSYLKSLPKEVPVDDHSSLNVTFVNNV 242

Query: 90  VLSNSSIAIAINGLFTERSEVVESEG-YKKGFKISSACGGLPNMIKVSLHEYVIQSASLV 148
           +LS+SSI    NGLF +R++ +     + K  K+   C     M+ +SL E V  SAS +
Sbjct: 243 LLSDSSIGFETNGLFIKRNDSLPIPNLWHKNSKLPILCTNSSKMLAISLDEAVFNSASSL 302

Query: 149 YFNAGKMQLIIDELPDQVILNTAECRFIVPQLYKQYP 185
           Y++A  M  I+D++PDQ +LNTA  RFI+PQLY++YP
Sbjct: 303 YYDAKFMHWIVDKIPDQSLLNTAGWRFIIPQLYRKYP 339