Miyakogusa Predicted Gene

Lj2g3v0191790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0191790.1 Non Characterized Hit- tr|K3XEG3|K3XEG3_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si000280,44.91,8e-19,seg,NULL; coiled-coil,NULL,CUFF.34421.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g091650.2 | ribonuclease P protein subunit P38, related pr...   230   8e-61
Medtr3g091650.1 | ribonuclease P protein subunit P38, related pr...   230   8e-61
Medtr3g091650.3 | ribonuclease P protein subunit P38, related pr...   230   8e-61

>Medtr3g091650.2 | ribonuclease P protein subunit P38, related
           protein, putative | HC | chr3:41722561-41726248 |
           20130731
          Length = 693

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 146/233 (62%), Positives = 165/233 (70%), Gaps = 19/233 (8%)

Query: 1   MNQKLKEMEGLVESRDMXXXXXXXXXXXXXXXVNKAERDAKQLRELETNQ----SSDLRK 56
           +NQKLKEMEGLVE +D                  KAE+DA++LRE    +    SSDLRK
Sbjct: 146 LNQKLKEMEGLVEEKDKKIEEEEKKRKELEEKAKKAEKDAEELRESSKREGQEHSSDLRK 205

Query: 57  HKTAFIELVSNQRHLEAELGRAVKQMEAAKHEL-------EESDLMAQNFSLEIAKLHKD 109
           HKTAFIELVSNQRHLEAELGRAVK ++AAK EL       EESDLM Q  +LEIAK HKD
Sbjct: 206 HKTAFIELVSNQRHLEAELGRAVKHLDAAKEELIAVMENKEESDLMVQKLTLEIAKFHKD 265

Query: 110 LEQKDKILSAMLRKSKMDSEEKQMLLKEVKLSKARRKQAEQETERWRVVSEGKKERHSFK 169
           LEQKDKILSAMLRKSK+D+ EKQMLLKEVKLSKARRK AE ETE+WR  SEGK +RHSFK
Sbjct: 266 LEQKDKILSAMLRKSKLDTAEKQMLLKEVKLSKARRKHAEHETEKWREASEGKHDRHSFK 325

Query: 170 NMLVNLSTR-GMQSSSAGSSH------IPKESEKISASPFSDDHYLPQRSEDL 215
           NML+NLS+R  +  SS G  H          +E+   SP S DHYLPQR+EDL
Sbjct: 326 NMLMNLSSRKDVFPSSRGMQHSSSTGSSHISNEQEQFSPIS-DHYLPQRNEDL 377


>Medtr3g091650.1 | ribonuclease P protein subunit P38, related
           protein, putative | HC | chr3:41722463-41726321 |
           20130731
          Length = 797

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 146/233 (62%), Positives = 165/233 (70%), Gaps = 19/233 (8%)

Query: 1   MNQKLKEMEGLVESRDMXXXXXXXXXXXXXXXVNKAERDAKQLRELETNQ----SSDLRK 56
           +NQKLKEMEGLVE +D                  KAE+DA++LRE    +    SSDLRK
Sbjct: 146 LNQKLKEMEGLVEEKDKKIEEEEKKRKELEEKAKKAEKDAEELRESSKREGQEHSSDLRK 205

Query: 57  HKTAFIELVSNQRHLEAELGRAVKQMEAAKHEL-------EESDLMAQNFSLEIAKLHKD 109
           HKTAFIELVSNQRHLEAELGRAVK ++AAK EL       EESDLM Q  +LEIAK HKD
Sbjct: 206 HKTAFIELVSNQRHLEAELGRAVKHLDAAKEELIAVMENKEESDLMVQKLTLEIAKFHKD 265

Query: 110 LEQKDKILSAMLRKSKMDSEEKQMLLKEVKLSKARRKQAEQETERWRVVSEGKKERHSFK 169
           LEQKDKILSAMLRKSK+D+ EKQMLLKEVKLSKARRK AE ETE+WR  SEGK +RHSFK
Sbjct: 266 LEQKDKILSAMLRKSKLDTAEKQMLLKEVKLSKARRKHAEHETEKWREASEGKHDRHSFK 325

Query: 170 NMLVNLSTR-GMQSSSAGSSH------IPKESEKISASPFSDDHYLPQRSEDL 215
           NML+NLS+R  +  SS G  H          +E+   SP S DHYLPQR+EDL
Sbjct: 326 NMLMNLSSRKDVFPSSRGMQHSSSTGSSHISNEQEQFSPIS-DHYLPQRNEDL 377


>Medtr3g091650.3 | ribonuclease P protein subunit P38, related
           protein, putative | HC | chr3:41722369-41726321 |
           20130731
          Length = 797

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 146/233 (62%), Positives = 165/233 (70%), Gaps = 19/233 (8%)

Query: 1   MNQKLKEMEGLVESRDMXXXXXXXXXXXXXXXVNKAERDAKQLRELETNQ----SSDLRK 56
           +NQKLKEMEGLVE +D                  KAE+DA++LRE    +    SSDLRK
Sbjct: 146 LNQKLKEMEGLVEEKDKKIEEEEKKRKELEEKAKKAEKDAEELRESSKREGQEHSSDLRK 205

Query: 57  HKTAFIELVSNQRHLEAELGRAVKQMEAAKHEL-------EESDLMAQNFSLEIAKLHKD 109
           HKTAFIELVSNQRHLEAELGRAVK ++AAK EL       EESDLM Q  +LEIAK HKD
Sbjct: 206 HKTAFIELVSNQRHLEAELGRAVKHLDAAKEELIAVMENKEESDLMVQKLTLEIAKFHKD 265

Query: 110 LEQKDKILSAMLRKSKMDSEEKQMLLKEVKLSKARRKQAEQETERWRVVSEGKKERHSFK 169
           LEQKDKILSAMLRKSK+D+ EKQMLLKEVKLSKARRK AE ETE+WR  SEGK +RHSFK
Sbjct: 266 LEQKDKILSAMLRKSKLDTAEKQMLLKEVKLSKARRKHAEHETEKWREASEGKHDRHSFK 325

Query: 170 NMLVNLSTR-GMQSSSAGSSH------IPKESEKISASPFSDDHYLPQRSEDL 215
           NML+NLS+R  +  SS G  H          +E+   SP S DHYLPQR+EDL
Sbjct: 326 NMLMNLSSRKDVFPSSRGMQHSSSTGSSHISNEQEQFSPIS-DHYLPQRNEDL 377