Miyakogusa Predicted Gene

Lj2g3v0178230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0178230.1 Non Characterized Hit- tr|C6T1M3|C6T1M3_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,43.75,0.000000000000004,seg,NULL,CUFF.34316.1
         (254 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g012760.1 | transmembrane protein, putative | HC | chr6:39...   193   1e-49
Medtr8g077030.1 | SAM-dependent carboxyl methyltransferase | LC ...   157   7e-39
Medtr1g030860.4 | hypothetical protein | HC | chr1:10802509-1079...    61   8e-10
Medtr1g030860.1 | hypothetical protein | HC | chr1:10802509-1079...    61   8e-10
Medtr1g030860.2 | hypothetical protein | HC | chr1:10802509-1079...    61   8e-10
Medtr1g030860.3 | hypothetical protein | HC | chr1:10802509-1079...    61   8e-10

>Medtr6g012760.1 | transmembrane protein, putative | HC |
           chr6:3957866-3956581 | 20130731
          Length = 255

 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 151/274 (55%), Gaps = 41/274 (14%)

Query: 1   MKTVQVAARQPVIPVESKFSARKPVIPVKNKSQSHHFTSLPCISSMNAFPLSRTSLRPGA 60
           M  +QVAA  P I V   +             Q HHF S P   SMNA PLSRT L P A
Sbjct: 1   MNAIQVAASNPAIYVRKNY-------------QPHHFLSTPKGLSMNANPLSRTFLIPRA 47

Query: 61  RPAFGL----------PYL-----------PVLKSQQPFHVCLAGGKGMMGSNEDSRWKS 99
           + + GL          P L           PVLKSQ+P HVCLAGGKGMM ++EDS+ KS
Sbjct: 48  KLSSGLYCVRQSATTAPVLKVYPSNLTQSVPVLKSQKPRHVCLAGGKGMMDNSEDSQRKS 107

Query: 100 PEAEIEKLKGQSIEDMLRQQIHKQKNXXXXXXXXXXXXXXXXXXXXSEEGDFAGLSDEIQ 159
            E  ++ L+ +       Q+                          SEEG   G+SDE  
Sbjct: 108 LEEAMKSLQEKI------QKGEYSGGSGSKPPGGRGRGGGGGNSDGSEEGSTGGMSDETA 161

Query: 160 QIILATIGFILVYICVIDGVELAKLSKDILKYLFGGTQSLRLKKAIYKWTRFFKLLTGNR 219
           QI+ ATIGF+ VYI VI+GVEL KL++D +KYL GGTQS+RLK+A YK +RF+K +TG  
Sbjct: 162 QIVFATIGFMFVYIYVINGVELTKLARDFIKYLLGGTQSVRLKRASYKCSRFYKKITGQN 221

Query: 220 KVLKNELEEAPTQRNNLDYYHDDVLRNYMKPNSD 253
           +V ++ LE  P + N  D+Y  DVLRNYMKPNS+
Sbjct: 222 EVDEDGLETGPLRWNIADFYR-DVLRNYMKPNSN 254


>Medtr8g077030.1 | SAM-dependent carboxyl methyltransferase | LC |
           chr8:32705244-32700574 | 20130731
          Length = 525

 Score =  157 bits (398), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/237 (44%), Positives = 138/237 (58%), Gaps = 26/237 (10%)

Query: 38  TSLPCISSMNAFPLSRTSLRPGARPAFGL----------PYL-----------PVLKSQQ 76
           ++ P   SMNA PLS + + P A+P+ GL          P L           PVLKS++
Sbjct: 293 SATPLGLSMNANPLSSSFIIPRAKPSSGLECVRQSAVTAPTLKVYPRNQTQCVPVLKSRK 352

Query: 77  PFHVCLAGGKGMMGSNEDSRWKSPEAEIEKLKGQSIEDMLRQQIHKQKNXXXXXXXXXXX 136
           P HVCLAGGKGMM ++E S+ KS E  ++ L+    E + + +                 
Sbjct: 353 PCHVCLAGGKGMMDNSEFSQRKSLEEAMKSLQ----EKIQKGEYSGGSGSKPPGGRGSGS 408

Query: 137 XXXXXXXXXSEEGDFAGLSDEIQQIILATIGFILVYICVIDGVELAKLSKDILKYLFGGT 196
                    SEEG F G+S E  QI+ ATIGFI VYI VI+GVE  KL++D +KYL GG 
Sbjct: 409 GGGRGSSGGSEEGSFGGMSVETLQIVFATIGFIFVYIYVINGVEFTKLARDFIKYLLGGA 468

Query: 197 QSLRLKKAIYKWTRFFKLLTGNRKVLKNELEEAPTQRNNLDYYHDDVLRNYMKPNSD 253
           QS+RLK+A YK  RF+K +T  ++V +N LE+APTQ N  D+Y  DVLRNYMKPNS+
Sbjct: 469 QSVRLKRASYKLARFYKKVTRQKEVDENGLEKAPTQWNIADFYR-DVLRNYMKPNSN 524


>Medtr1g030860.4 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 29/231 (12%)

Query: 39  SLPCI---SSMNAFPLSRT-SLRPGARPAFGLPYLPVLKSQQPFHVCLAGGKGMM-GSNE 93
           S  C+   S +N+FP  R+ S+R   +P FGL      KS +P     AGGKGM   S+E
Sbjct: 18  SKSCVLQKSIVNSFPRIRSISIRD--KPLFGL------KSLKPLR---AGGKGMSENSDE 66

Query: 94  DSRWKSPEAEIEKLKGQSIEDMLRQQIHKQK--NXXXXXXXXXXXXXXXXXXXXSEEGDF 151
           +S W+S    ++K KGQ IE++LR+QI K +  +                          
Sbjct: 67  NSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNGGSGVKPPGGGGGEGGSGGGSPNGP 126

Query: 152 AGLSDE----IQQIILATIGFILVYICVIDGVELAKLSKDILKYLFGGTQSLRLKKAIYK 207
            G  DE     +Q I A+   + +YI +I G EL +   D L+++ G  ++ R+K+ + +
Sbjct: 127 GGSDDEESYDTRQTIFASGALLSLYIYLIMGKELLRTIFDFLRFIVGLGKTSRIKRILVR 186

Query: 208 WTRFFKLLTGNRKVLKNELEEAPTQRNNLDYYHD-----DVLRNYMKPNSD 253
             + +K  T  RK+      E     N   +++D       ++NY   ++D
Sbjct: 187 LGKLYK-STKRRKITDEHFLEKAIL-NTPTWWYDPQDFRTAVKNYYASDAD 235


>Medtr1g030860.1 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 29/231 (12%)

Query: 39  SLPCI---SSMNAFPLSRT-SLRPGARPAFGLPYLPVLKSQQPFHVCLAGGKGMM-GSNE 93
           S  C+   S +N+FP  R+ S+R   +P FGL      KS +P     AGGKGM   S+E
Sbjct: 18  SKSCVLQKSIVNSFPRIRSISIRD--KPLFGL------KSLKPLR---AGGKGMSENSDE 66

Query: 94  DSRWKSPEAEIEKLKGQSIEDMLRQQIHKQK--NXXXXXXXXXXXXXXXXXXXXSEEGDF 151
           +S W+S    ++K KGQ IE++LR+QI K +  +                          
Sbjct: 67  NSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNGGSGVKPPGGGGGEGGSGGGSPNGP 126

Query: 152 AGLSDE----IQQIILATIGFILVYICVIDGVELAKLSKDILKYLFGGTQSLRLKKAIYK 207
            G  DE     +Q I A+   + +YI +I G EL +   D L+++ G  ++ R+K+ + +
Sbjct: 127 GGSDDEESYDTRQTIFASGALLSLYIYLIMGKELLRTIFDFLRFIVGLGKTSRIKRILVR 186

Query: 208 WTRFFKLLTGNRKVLKNELEEAPTQRNNLDYYHD-----DVLRNYMKPNSD 253
             + +K  T  RK+      E     N   +++D       ++NY   ++D
Sbjct: 187 LGKLYK-STKRRKITDEHFLEKAIL-NTPTWWYDPQDFRTAVKNYYASDAD 235


>Medtr1g030860.2 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 29/231 (12%)

Query: 39  SLPCI---SSMNAFPLSRT-SLRPGARPAFGLPYLPVLKSQQPFHVCLAGGKGMM-GSNE 93
           S  C+   S +N+FP  R+ S+R   +P FGL      KS +P     AGGKGM   S+E
Sbjct: 18  SKSCVLQKSIVNSFPRIRSISIRD--KPLFGL------KSLKPLR---AGGKGMSENSDE 66

Query: 94  DSRWKSPEAEIEKLKGQSIEDMLRQQIHKQK--NXXXXXXXXXXXXXXXXXXXXSEEGDF 151
           +S W+S    ++K KGQ IE++LR+QI K +  +                          
Sbjct: 67  NSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNGGSGVKPPGGGGGEGGSGGGSPNGP 126

Query: 152 AGLSDE----IQQIILATIGFILVYICVIDGVELAKLSKDILKYLFGGTQSLRLKKAIYK 207
            G  DE     +Q I A+   + +YI +I G EL +   D L+++ G  ++ R+K+ + +
Sbjct: 127 GGSDDEESYDTRQTIFASGALLSLYIYLIMGKELLRTIFDFLRFIVGLGKTSRIKRILVR 186

Query: 208 WTRFFKLLTGNRKVLKNELEEAPTQRNNLDYYHD-----DVLRNYMKPNSD 253
             + +K  T  RK+      E     N   +++D       ++NY   ++D
Sbjct: 187 LGKLYK-STKRRKITDEHFLEKAIL-NTPTWWYDPQDFRTAVKNYYASDAD 235


>Medtr1g030860.3 | hypothetical protein | HC |
           chr1:10802509-10797249 | 20130731
          Length = 236

 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 29/231 (12%)

Query: 39  SLPCI---SSMNAFPLSRT-SLRPGARPAFGLPYLPVLKSQQPFHVCLAGGKGMM-GSNE 93
           S  C+   S +N+FP  R+ S+R   +P FGL      KS +P     AGGKGM   S+E
Sbjct: 18  SKSCVLQKSIVNSFPRIRSISIRD--KPLFGL------KSLKPLR---AGGKGMSENSDE 66

Query: 94  DSRWKSPEAEIEKLKGQSIEDMLRQQIHKQK--NXXXXXXXXXXXXXXXXXXXXSEEGDF 151
           +S W+S    ++K KGQ IE++LR+QI K +  +                          
Sbjct: 67  NSPWQSITNAMDKFKGQPIEEVLRKQIQKGEYLDNGGSGVKPPGGGGGEGGSGGGSPNGP 126

Query: 152 AGLSDE----IQQIILATIGFILVYICVIDGVELAKLSKDILKYLFGGTQSLRLKKAIYK 207
            G  DE     +Q I A+   + +YI +I G EL +   D L+++ G  ++ R+K+ + +
Sbjct: 127 GGSDDEESYDTRQTIFASGALLSLYIYLIMGKELLRTIFDFLRFIVGLGKTSRIKRILVR 186

Query: 208 WTRFFKLLTGNRKVLKNELEEAPTQRNNLDYYHD-----DVLRNYMKPNSD 253
             + +K  T  RK+      E     N   +++D       ++NY   ++D
Sbjct: 187 LGKLYK-STKRRKITDEHFLEKAIL-NTPTWWYDPQDFRTAVKNYYASDAD 235