Miyakogusa Predicted Gene

Lj2g3v0156870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v0156870.1 Non Characterized Hit- tr|I1JDH7|I1JDH7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48939
PE,78.55,0,Metallo-beta-lactamase superfamily,Beta-lactamase-like;
Beta-Casp domain,Beta-Casp domain; INTEGRATO,CUFF.34348.1
         (566 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g032500.1 | cleavage and polyadenylation specificity facto...   920   0.0  
Medtr1g032500.2 | cleavage and polyadenylation specificity facto...   713   0.0  
Medtr2g006180.1 | cleavage and polyadenylation specificity facto...   281   1e-75
Medtr1g050492.1 | cleavage and polyadenylation specificity facto...   135   8e-32

>Medtr1g032500.1 | cleavage and polyadenylation specificity factor,
           putative | HC | chr1:11561666-11549764 | 20130731
          Length = 534

 Score =  920 bits (2379), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/568 (78%), Positives = 480/568 (84%), Gaps = 36/568 (6%)

Query: 1   MAIETLVLGAGQEGGKSCVVVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAAL 60
           M IE LVLGAGQE GKSCV+V INGKRIMFDCGMHM   DH RYPDF  IS  G+++ AL
Sbjct: 1   MTIEVLVLGAGQEVGKSCVIVKINGKRIMFDCGMHMRHTDHSRYPDFKKISDSGNFNDAL 60

Query: 61  SCIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELF 120
            CIIITHFHLDHVGALAYFTEVCGY GP+YMTYPTKAL+PLMLEDYRKVMVDRRGEEE F
Sbjct: 61  DCIIITHFHLDHVGALAYFTEVCGYSGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQF 120

Query: 121 TSENIAECIKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM 180
           TS++IAEC+KKVIA+DL+QTVQVDEDLQIRAYYAGHVIGAAMFY KVGDAEMVYTGDYNM
Sbjct: 121 TSDHIAECMKKVIAVDLKQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNM 180

Query: 181 TADRHLEAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFA 240
           T DRHL AAQIDRLRLDLLITESTYATTIRDSKYAREREFLK VHKCVSGGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFA 240

Query: 241 LGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFD 300
           LGRAQEL ILLDDYWERMNLKVPIYFS+GLTIQAN Y+KMLI WTSQKIKDTYSTHNAFD
Sbjct: 241 LGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGWTSQKIKDTYSTHNAFD 300

Query: 301 FKNVHHFERSMINAPGSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGH 360
           FKNVH FERSM++APG CVLFATPGM+ GGFSLEVFKHWAPSE NL+ LPGYC+AGTVGH
Sbjct: 301 FKNVHKFERSMLDAPGPCVLFATPGMLIGGFSLEVFKHWAPSEKNLVALPGYCMAGTVGH 360

Query: 361 RLMSGKATKVDVDPETQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKI 420
           RL SGK TKVD DP+TQIDVRCQIHQLAFS HTDSKGIMDLVKFLSPKHV+LVHG+KPK+
Sbjct: 361 RLTSGKPTKVDTDPDTQIDVRCQIHQLAFSAHTDSKGIMDLVKFLSPKHVMLVHGDKPKM 420

Query: 421 ALLKEKIHSELGIPCHDPANHETICISSTPYVKTEASGTFIQNCLNPNFKFQKCSSVDEC 480
             LKE+I SELGIPC  PAN+E + ISST YV  EAS TF +NCLNPNFKFQKCSS+D C
Sbjct: 421 VSLKERIDSELGIPCSHPANNEIVTISSTQYVNAEASDTFTKNCLNPNFKFQKCSSMDTC 480

Query: 481 DSTLTEKNLMPELQVKNCLNPNFKFQKCSSVDECDSTLTEKNLMPELQVKDERVAEGVLV 540
           +STL ++NL PE                                  LQV+DERVA+GVLV
Sbjct: 481 NSTLIDRNLTPE----------------------------------LQVEDERVADGVLV 506

Query: 541 ME--KTKKAKIVHQDELLLMLGEKKQGV 566
           ME    KKAKIVH+DE+LLML EKK  V
Sbjct: 507 MENNNNKKAKIVHEDEILLMLDEKKHEV 534


>Medtr1g032500.2 | cleavage and polyadenylation specificity factor,
           putative | HC | chr1:11561666-11551365 | 20130731
          Length = 415

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/389 (85%), Positives = 357/389 (91%)

Query: 1   MAIETLVLGAGQEGGKSCVVVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAAL 60
           M IE LVLGAGQE GKSCV+V INGKRIMFDCGMHM   DH RYPDF  IS  G+++ AL
Sbjct: 1   MTIEVLVLGAGQEVGKSCVIVKINGKRIMFDCGMHMRHTDHSRYPDFKKISDSGNFNDAL 60

Query: 61  SCIIITHFHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELF 120
            CIIITHFHLDHVGALAYFTEVCGY GP+YMTYPTKAL+PLMLEDYRKVMVDRRGEEE F
Sbjct: 61  DCIIITHFHLDHVGALAYFTEVCGYSGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQF 120

Query: 121 TSENIAECIKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNM 180
           TS++IAEC+KKVIA+DL+QTVQVDEDLQIRAYYAGHVIGAAMFY KVGDAEMVYTGDYNM
Sbjct: 121 TSDHIAECMKKVIAVDLKQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNM 180

Query: 181 TADRHLEAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFA 240
           T DRHL AAQIDRLRLDLLITESTYATTIRDSKYAREREFLK VHKCVSGGGKVLIPTFA
Sbjct: 181 TPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFA 240

Query: 241 LGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFD 300
           LGRAQEL ILLDDYWERMNLKVPIYFS+GLTIQAN Y+KMLI WTSQKIKDTYSTHNAFD
Sbjct: 241 LGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGWTSQKIKDTYSTHNAFD 300

Query: 301 FKNVHHFERSMINAPGSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGH 360
           FKNVH FERSM++APG CVLFATPGM+ GGFSLEVFKHWAPSE NL+ LPGYC+AGTVGH
Sbjct: 301 FKNVHKFERSMLDAPGPCVLFATPGMLIGGFSLEVFKHWAPSEKNLVALPGYCMAGTVGH 360

Query: 361 RLMSGKATKVDVDPETQIDVRCQIHQLAF 389
           RL SGK TKVD DP+TQIDVRCQ+H +++
Sbjct: 361 RLTSGKPTKVDTDPDTQIDVRCQVHFISY 389


>Medtr2g006180.1 | cleavage and polyadenylation specificity factor |
           HC | chr2:489334-485307 | 20130731
          Length = 690

 Score =  281 bits (719), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 155/433 (35%), Positives = 241/433 (55%), Gaps = 23/433 (5%)

Query: 8   LGAGQEGGKSCVVVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAALSCIIITH 67
           LGAG E G+SCV +T  GK ++FDCG+H G       P F  I       + +  ++ITH
Sbjct: 27  LGAGNEVGRSCVYMTYKGKTVLFDCGIHPGYSGMAALPYFDEIDP-----STVDVLLITH 81

Query: 68  FHLDHVGALAYFTEVCGYRGPIYMTYPTKALAPLMLEDY---RKVMVDRRGEEELFTSEN 124
           FHLDH  +L YF E   ++G ++MTY TKA+  L+L DY    KV VD    + L+  ++
Sbjct: 82  FHLDHAASLPYFLEKTTFKGRVFMTYATKAIYKLLLSDYVKVSKVSVD----DMLYDEQD 137

Query: 125 IAECIKKVIAIDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTADR 184
           I   + K+  ID  QTV+V+  ++   Y AGHV+GAAMF   +    ++YTGDY+   DR
Sbjct: 138 INRSMDKIEVIDFHQTVEVN-GIRFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDR 196

Query: 185 HLEAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFALGRA 244
           HL AA+  +   D+ I ESTY       ++ RE+ F  V+H  +S GG+VLIP +ALGRA
Sbjct: 197 HLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFTDVIHSTISQGGRVLIPAYALGRA 256

Query: 245 QELCILLDDYW----ERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTYSTHNAFD 300
           QEL ++LD+YW    E  N  +PIY+++ L  +    Y+      + +I++  S  N F 
Sbjct: 257 QELLLILDEYWANHPELQN--IPIYYASPLAKKCLTVYETYTLSMNDRIQNAKS--NPFA 312

Query: 301 FKNVHHFER-SMINAPGSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVG 359
           FK++       +    G  V+ A+PG +  G S ++F  W   + N   +PGY V GT+ 
Sbjct: 313 FKHISALSSIDIFKDVGPSVVMASPGGLQSGLSRQLFDMWCSDKKNSCVIPGYVVEGTLA 372

Query: 360 HRLMSGKATKVDVDPETQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPK 419
             +++ +  +V +       +  Q+H ++FS H DS      ++ L+P ++ILVHG   +
Sbjct: 373 KTILN-EPKEVTLMNGLSAPLHMQVHYISFSAHADSAQTSAFLEELNPPNIILVHGAANE 431

Query: 420 IALLKEKIHSELG 432
           +  LK+K+ ++  
Sbjct: 432 MGRLKQKLMTQFA 444


>Medtr1g050492.1 | cleavage and polyadenylation specificity factor
           subunit 2 | HC | chr1:19478035-19486897 | 20130731
          Length = 740

 Score =  135 bits (341), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 169/368 (45%), Gaps = 26/368 (7%)

Query: 20  VVTINGKRIMFDCGMHMGLLDHRRYPDFSLISSQGHYDAALSCIIITHFHLDHVGALAYF 79
           +V+I+   I+ DCG +    DH    D SL+       + +  ++++H    H+ AL Y 
Sbjct: 22  LVSIDSFNILIDCGWN----DHF---DPSLLQPLSRVASTIDAVLLSHPDTLHLAALPYA 74

Query: 80  TEVCGYRGPIYMTYPTKALAPLMLEDY---RKVMVDRRGEEELFTSENIAECIKKVIAID 136
            +  G   P+Y T P   L  L + D+   RK + D     +LFT ++I    + V  + 
Sbjct: 75  IKHLGLSAPVYSTEPVYRLGLLTMYDHFLSRKQVSDF----DLFTLDDIDSAFQTVTRLT 130

Query: 137 LRQTVQVD---EDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTADRHLEAAQIDR 193
             Q   +    E + I  + AGH++G  ++       +++Y  D+N   +RHL    +  
Sbjct: 131 YSQNHHLSGKGEGIVIAPHTAGHLLGGTIWKITKDGEDVIYAVDFNHRKERHLNGTVLGS 190

Query: 194 -LRLDLLITESTYATTIRDSKYAREREFLKVVHKCVSGGGKVLIPTFALGRAQELCILLD 252
            +R  +LIT++  A   +  +  +++EF  ++ K +  GG VL+P    GR  EL ++L+
Sbjct: 191 FVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRAGGNVLLPVDTAGRILELILMLE 250

Query: 253 DYWERMNLKVPIYFSAGLTIQANMYYKMLISWTSQKIKDTY--STHNAFDFKNVHHF--E 308
            YW   NL  PIYF   +      Y K  + W S  I  ++  +  N F  KN+     +
Sbjct: 251 SYWADENLNYPIYFLTYVASSTIDYVKSFLEWMSDSIAKSFEQTRENIFLLKNITLLVSK 310

Query: 309 RSMINAP-GSCVLFATPGMISGGFSLEVFKHWAPSENNLITLPGYCVAGTVGHRLMSG-- 365
             + NAP G  V+ A+   +  GFS ++F  W     NL+        GT+   L +   
Sbjct: 311 ADLDNAPDGPKVVLASMASLEAGFSHDIFVEWGNDVKNLVLFTERGQFGTLARMLQADPP 370

Query: 366 -KATKVDV 372
            KA KV V
Sbjct: 371 PKAVKVTV 378